Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,223,632 A→G L15P (CTG→CCG)  yohC ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,223,6320AG99.4% 985.8 / ‑4.2 312L15P (CTG→CCG) yohChypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (159/151);  total (160/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01

Only 100 of 325 total aligned reads displayed.

GCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACAGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGC  >  NC_000913/2223542‑2223724
                                                                                          |                                                                                            
gccATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGt                                                                                            <  2:195185/93‑1 (MQ=255)
gccATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGt                                                                                            >  1:2565132/1‑93 (MQ=255)
 ccATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTc                                                                                           >  2:9896433/1‑93 (MQ=255)
 ccATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTc                                                                                           >  2:4446850/1‑93 (MQ=255)
   aTCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTccc                                                                                         >  2:5367089/1‑93 (MQ=255)
   aTCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTccc                                                                                         <  1:595906/93‑1 (MQ=255)
    tCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTcccc                                                                                        >  1:1179328/1‑93 (MQ=255)
    tCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTcccc                                                                                        <  2:7081293/93‑1 (MQ=255)
    tCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTcccc                                                                                        <  1:5070096/93‑1 (MQ=255)
     cAGCAAAGCGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTGCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCa                                                                                       <  1:9653959/93‑1 (MQ=255)
      aGCAAAGCGTGGTGGGTGTAAGGGTGAGAAACCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAg                                                                                      <  1:7513956/93‑1 (MQ=255)
      aGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCGCCAg                                                                                      >  2:1093095/1‑93 (MQ=255)
       gCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGa                                                                                     >  1:8766444/1‑93 (MQ=255)
         aaaaCGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACa                                                                                   <  1:843806/93‑1 (MQ=255)
           aaCGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATg                                                                                 >  2:8601416/1‑93 (MQ=255)
            aCGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATgg                                                                                <  1:1041102/93‑1 (MQ=255)
             cGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGc                                                                               <  2:3231993/93‑1 (MQ=255)
              gtggtgGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACTATCGGGATGGGAAAACGGTCCCCAGACATGGCt                                                                              >  1:9471859/1‑93 (MQ=255)
               tggtggGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGCAAACGGTCCCCAGACATGGCTc                                                                             >  1:6973013/1‑93 (MQ=255)
               tggtggGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTc                                                                             >  2:4048007/1‑93 (MQ=255)
               tggtggGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTc                                                                             <  2:5749790/93‑1 (MQ=255)
                 gtgggtgTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCAt                                                                           >  1:8004201/1‑93 (MQ=255)
                  tgggtgTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATa                                                                          <  2:1600037/93‑1 (MQ=255)
                  tgggtgTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATa                                                                          <  2:5001789/93‑1 (MQ=255)
                   gggtgTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATAc                                                                         >  1:6410263/1‑93 (MQ=255)
                   gggtgTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATAc                                                                         <  2:2606874/93‑1 (MQ=255)
                    ggtgTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATAcc                                                                        <  2:8820625/93‑1 (MQ=255)
                    ggtgTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATAcc                                                                        >  2:8186558/1‑93 (MQ=255)
                    ggtgTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATAcc                                                                        <  1:7333529/93‑1 (MQ=255)
                     gtgtAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCg                                                                       >  1:9861356/1‑93 (MQ=255)
                     gtgtAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCg                                                                       >  1:9141118/1‑93 (MQ=255)
                      tgtAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGc                                                                      <  1:5794805/93‑1 (MQ=255)
                       gtAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGcc                                                                     >  1:2854392/1‑93 (MQ=255)
                          aTGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGccccc                                                                  <  1:3662892/93‑1 (MQ=255)
                          aTGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATAACGccccc                                                                  <  1:7816769/93‑1 (MQ=255)
                           tGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCt                                                                 >  2:6510598/1‑93 (MQ=255)
                            ggTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCtt                                                                <  1:6591999/93‑1 (MQ=255)
                              tGAGAAATCGTTTTGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCttgt                                                              >  2:9221464/1‑93 (MQ=255)
                              tGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCttgt                                                              <  2:8893786/93‑1 (MQ=255)
                              tGAAAAATCGTTTCGTTTTCGCGATTAATCTCCTGCATTTCTCGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCttgt                                                              <  2:8364416/93‑1 (MQ=255)
                                 gaAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTtgttgt                                                           >  2:7512168/1‑93 (MQ=255)
                                 gaAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTtgttgt                                                           >  2:3828556/1‑93 (MQ=255)
                                  aaaTCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTtgtg                                                          >  2:7716106/1‑93 (MQ=255)
                                  aaaTCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTtgtg                                                          >  2:417840/1‑93 (MQ=255)
                                   aaTCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGa                                                         >  1:4802337/1‑93 (MQ=255)
                                   aaTCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGa                                                         <  2:10007015/93‑1 (MQ=255)
                                    aTCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAg                                                        <  2:2224629/93‑1 (MQ=255)
                                     tcgtttcgttTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGt                                                       <  1:1153922/93‑1 (MQ=255)
                                     tcgtttcgttTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGt                                                       <  1:6028336/93‑1 (MQ=255)
                                      cgtttcgtttTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGtt                                                      <  1:3199942/93‑1 (MQ=255)
                                       ttttcgtttTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTc                                                     <  2:5838941/92‑1 (MQ=255)
                                       gtttcgtttTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTc                                                     >  1:5584118/1‑93 (MQ=255)
                                          tcgtttTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATg                                                  >  2:5637698/1‑93 (MQ=255)
                                           tgtttTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGa                                                 <  2:2047756/92‑1 (MQ=255)
                                           cgtttTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGa                                                 >  1:2143319/1‑93 (MQ=255)
                                           cgtttTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGa                                                 <  2:7921766/93‑1 (MQ=255)
                                           cgtttTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGa                                                 <  2:3076371/93‑1 (MQ=255)
                                            gtttTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGaa                                                <  1:7084909/93‑1 (MQ=255)
                                            gtttTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGaa                                                >  1:3774720/1‑93 (MQ=255)
                                             ttttCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAAc                                               >  2:521585/1‑93 (MQ=255)
                                             ttttCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAAc                                               >  1:3720018/1‑93 (MQ=255)
                                                tCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTg                                            >  1:3306147/1‑93 (MQ=255)
                                                 cgcgATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGa                                           <  1:4468836/93‑1 (MQ=255)
                                                  gcgATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGAc                                          <  2:4967392/93‑1 (MQ=255)
                                                  gcgATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGAc                                          <  1:4130918/93‑1 (MQ=255)
                                                   cgATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACa                                         <  2:9164259/93‑1 (MQ=255)
                                                    gATTAATCACCTGCATTTTACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAg                                        >  2:6335012/1‑93 (MQ=255)
                                                    gATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAg                                        >  2:4289849/1‑93 (MQ=255)
                                                    gATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAg                                        <  2:6981309/93‑1 (MQ=255)
                                                     aTTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGt                                       >  1:8244429/1‑93 (MQ=255)
                                                      ttAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGtt                                      <  1:6444136/93‑1 (MQ=255)
                                                       tAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTc                                     >  1:6299291/1‑93 (MQ=255)
                                                       tAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTc                                     >  1:9499528/1‑93 (MQ=255)
                                                        aaTCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCa                                    >  1:2373808/1‑93 (MQ=255)
                                                        aaTCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCa                                    <  2:2339284/93‑1 (MQ=255)
                                                         aTCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATTGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCaa                                   <  2:5998181/93‑1 (MQ=255)
                                                         aTCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCaa                                   <  2:8643579/93‑1 (MQ=255)
                                                          tCACTTGCATTTCACGATCGGGATGGGAAAACGGTCTCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGACCCTGACAGTTCAAg                                  <  2:9713942/93‑1 (MQ=255)
                                                            aCCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGta                                >  1:9238817/1‑93 (MQ=255)
                                                            aCCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGta                                <  1:3181754/93‑1 (MQ=255)
                                                               tGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATaa                             <  2:8213713/93‑1 (MQ=255)
                                                                gCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAg                            >  1:8517921/1‑93 (MQ=255)
                                                                  aTTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTc                          <  2:9517770/93‑1 (MQ=255)
                                                                  aTTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTc                          <  2:7126308/93‑1 (MQ=255)
                                                                       aCGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCtt                     >  1:4711673/1‑93 (MQ=255)
                                                                       aCGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCtt                     <  1:6112418/93‑1 (MQ=255)
                                                                        cGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTtg                    <  1:3915690/93‑1 (MQ=255)
                                                                         gATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTtgt                   <  2:3584940/93‑1 (MQ=255)
                                                                          aTCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTtgtg                  <  1:4245547/93‑1 (MQ=255)
                                                                           tCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGa                 <  2:3381642/93‑1 (MQ=255)
                                                                              ggATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGatta              >  1:6643815/1‑93 (MQ=255)
                                                                              ggATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGatta              >  2:6582518/1‑93 (MQ=255)
                                                                              ggATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGatta              <  2:143308/93‑1 (MQ=255)
                                                                               gATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGattat             <  1:7876424/93‑1 (MQ=255)
                                                                                aTGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGattatt            <  2:7679071/93‑1 (MQ=255)
                                                                                aTGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGattatt            <  2:9809541/93‑1 (MQ=255)
                                                                                 tGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTAttt           <  1:1481601/93‑1 (MQ=255)
                                                                                 tGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTAttt           >  1:2246131/1‑93 (MQ=255)
                                                                                    gAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTAtttttt        <  2:7268315/93‑1 (MQ=255)
                                                                                       aaCGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGtt     <  1:10038384/93‑1 (MQ=255)
                                                                                          |                                                                                            
GCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACAGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGC  >  NC_000913/2223542‑2223724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCCGCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACAGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCC  >  NC_000913/2223539‑2223725
                                                                                             |                                                                                             
GCCGCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACG                                                                                               <  SRR4302540.10094237/94‑1 (MQ=60)
GCCGACATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACG                                                                                               <  SRR4302540.3378922/94‑1 (MQ=60)
 CCGCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGG                                                                                              <  SRR4302540.6423704/94‑1 (MQ=60)
 CCGCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGG                                                                                              <  SRR4302540.3823168/94‑1 (MQ=60)
 CCGCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGG                                                                                              <  SRR4302540.6423703/94‑1 (MQ=60)
  CGCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGT                                                                                             >  SRR4302540.2592785/1‑94 (MQ=60)
  CGCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGT                                                                                             <  SRR4302540.3251360/94‑1 (MQ=60)
   GCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGGTGGGAAAACGGTC                                                                                            >  SRR4302540.735814/1‑94 (MQ=60)
   GCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTC                                                                                            >  SRR4302540.6589772/1‑94 (MQ=60)
   GCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTC                                                                                            >  SRR4302540.6082093/1‑94 (MQ=60)
    CCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCC                                                                                           >  SRR4302540.7351636/1‑94 (MQ=60)
    CCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCC                                                                                           >  SRR4302540.824361/1‑94 (MQ=60)
    CCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCC                                                                                           <  SRR4302540.9606467/94‑1 (MQ=60)
      ATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGCTGGGAAAACGGTCCCC                                                                                         >  SRR4302540.3810973/1‑94 (MQ=60)
      ATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCC                                                                                         >  SRR4302540.1191512/1‑94 (MQ=60)
      ATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCC                                                                                         >  SRR4302540.6193637/1‑94 (MQ=60)
      ATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCC                                                                                         <  SRR4302540.602304/94‑1 (MQ=60)
      ATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCC                                                                                         >  SRR4302540.2871686/1‑94 (MQ=60)
       TCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCA                                                                                        <  SRR4302540.5124914/94‑1 (MQ=60)
        CAGCAAAGCGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTGCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAG                                                                                       <  SRR4302540.9767621/94‑1 (MQ=60)
        CAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAG                                                                                       <  SRR4302540.3994686/94‑1 (MQ=60)
         AGCAAAGCGTGGTGGGTGTAAGGGTGAGAAACCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGA                                                                                      <  SRR4302540.7597962/94‑1 (MQ=60)
         AGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGA                                                                                      >  SRR4302540.8924897/1‑94 (MQ=60)
         AGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGA                                                                                      >  SRR4302540.8868060/1‑94 (MQ=60)
         AGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGA                                                                                      >  SRR4302540.2418138/1‑94 (MQ=60)
          GCAAACCGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGAC                                                                                     <  SRR4302540.3822683/94‑1 (MQ=60)
           CAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACA                                                                                    <  SRR4302540.4599256/94‑1 (MQ=60)
            AAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACAT                                                                                   >  SRR4302540.4335417/1‑94 (MQ=60)
            AAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACAT                                                                                   <  SRR4302540.8000664/94‑1 (MQ=60)
            AAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACAT                                                                                   <  SRR4302540.852753/94‑1 (MQ=60)
             AAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATG                                                                                  >  SRR4302540.9572501/1‑94 (MQ=60)
              AACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGG                                                                                 <  SRR4302540.1144318/94‑1 (MQ=60)
               ACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGC                                                                                <  SRR4302540.1051689/94‑1 (MQ=60)
                CGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACTATCGGGATGGGAAAACGGTCCCCAGACATGGCT                                                                               >  SRR4302540.9584204/1‑94 (MQ=60)
                 GTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGCAAACGGTCCCCAGACATGGCTC                                                                              >  SRR4302540.7050511/1‑94 (MQ=60)
                 GTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTC                                                                              >  SRR4302540.9966808/1‑94 (MQ=60)
                   GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGCAAACGGTCCCCAGACATGGCTCAT                                                                            >  SRR4302540.4183700/1‑94 (MQ=60)
                   GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCAT                                                                            <  SRR4302540.3186789/94‑1 (MQ=60)
                   GGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCAT                                                                            >  SRR4302540.8097352/1‑94 (MQ=60)
                     TGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATAC                                                                          >  SRR4302540.6481606/1‑94 (MQ=60)
                     TGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATAC                                                                          <  SRR4302540.8124667/94‑1 (MQ=60)
                      GGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACC                                                                         >  SRR4302540.3229579/1‑94 (MQ=60)
                      GGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACC                                                                         <  SRR4302540.9408787/94‑1 (MQ=60)
                       GGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCG                                                                        <  SRR4302540.7415386/94‑1 (MQ=60)
                       GGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCG                                                                        >  SRR4302540.9250938/1‑94 (MQ=60)
                       GGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCG                                                                        >  SRR4302540.9976569/1‑94 (MQ=60)
                        GTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGC                                                                       >  SRR4302540.1184355/1‑94 (MQ=60)
                        GTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGCGGTGAGAAAACGGTCGCCAGACATGGCTCATACCGC                                                                       >  SRR4302540.7449379/1‑94 (MQ=60)
                         TGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGTCTCCTACCTCC                                                                      >  SRR4302540.1488334/1‑94 (MQ=60)
                         TGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCC                                                                      <  SRR4302540.5858837/94‑1 (MQ=60)
                         TGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCC                                                                      >  SRR4302540.9669932/1‑94 (MQ=60)
                         TGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCC                                                                      >  SRR4302540.2885321/1‑94 (MQ=60)
                         TGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCC                                                                      >  SRR4302540.3512196/1‑94 (MQ=60)
                          GTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCC                                                                     >  SRR4302540.3325580/1‑94 (MQ=60)
                          GTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCC                                                                     >  SRR4302540.4224111/1‑94 (MQ=60)
                          GTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCC                                                                     >  SRR4302540.3325579/1‑94 (MQ=60)
                             ATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCT                                                                  <  SRR4302540.3702982/94‑1 (MQ=60)
                             ATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCT                                                                  >  SRR4302540.9617858/1‑94 (MQ=60)
                             ATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCT                                                                  >  SRR4302540.6958900/1‑94 (MQ=60)
                             ATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCT                                                                  <  SRR4302540.9281481/94‑1 (MQ=60)
                             ATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATAACGCCCCCT                                                                  <  SRR4302540.7908120/94‑1 (MQ=60)
                              TGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACAGTCCCCAGACATGGCTCATACCGCCCCCTT                                                                 >  SRR4302540.1291958/1‑94 (MQ=60)
                               GGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTG                                                                <  SRR4302540.6665005/94‑1 (MQ=60)
                               GGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTG                                                                >  SRR4302540.7472714/1‑94 (MQ=60)
                                 TGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTT                                                              >  SRR4302540.248795/1‑94 (MQ=60)
                                 TGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTT                                                              >  SRR4302540.5988612/1‑94 (MQ=60)
                                    GAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTG                                                           >  SRR4302540.10159701/1‑94 (MQ=60)
                                    GAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTG                                                           >  SRR4302540.8382754/1‑94 (MQ=60)
                                    GAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTG                                                           >  SRR4302540.10159700/1‑94 (MQ=60)
                                     AAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGA                                                          <  SRR4302540.7584983/94‑1 (MQ=60)
                                     AAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGA                                                          >  SRR4302540.4853732/1‑94 (MQ=60)
                                      AATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAG                                                         >  SRR4302540.8814446/1‑94 (MQ=60)
                                      AATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAG                                                         >  SRR4302540.6439312/1‑94 (MQ=60)
                                       ATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGT                                                        <  SRR4302540.967093/94‑1 (MQ=60)
                                        TCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTT                                                       <  SRR4302540.1165934/94‑1 (MQ=60)
                                        TCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTT                                                       <  SRR4302540.6095228/94‑1 (MQ=60)
                                         CGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTC                                                      <  SRR4302540.5884325/94‑1 (MQ=60)
                                         CGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTC                                                      >  SRR4302540.5645582/1‑94 (MQ=60)
                                         CGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTC                                                      <  SRR4302540.3234694/94‑1 (MQ=60)
                                          GTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCA                                                     <  SRR4302540.10012008/94‑1 (MQ=60)
                                           TTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCAT                                                    >  SRR4302540.3221396/1‑94 (MQ=60)
                                           TTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCAT                                                    >  SRR4302540.5132329/1‑94 (MQ=60)
                                           TTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCAT                                                    <  SRR4302540.5823565/94‑1 (MQ=60)
                                            TTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATG                                                   >  SRR4302540.7042315/1‑94 (MQ=60)
                                             TCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGA                                                  >  SRR4302540.6412787/1‑94 (MQ=60)
                                             TCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGA                                                  >  SRR4302540.2166354/1‑94 (MQ=60)
                                             TCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGA                                                  >  SRR4302540.6219153/1‑94 (MQ=60)
                                             TCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGA                                                  >  SRR4302540.2166355/1‑94 (MQ=60)
                                              CGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAA                                                 <  SRR4302540.4611601/94‑1 (MQ=60)
                                              CGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAA                                                 >  SRR4302540.6323085/1‑94 (MQ=60)
                                              CGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAA                                                 >  SRR4302540.648570/1‑94 (MQ=60)
                                              CGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAA                                                 >  SRR4302540.3815903/1‑94 (MQ=60)
                                              CGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAA                                                 >  SRR4302540.3815902/1‑94 (MQ=60)
                                               ctttgCGCGATTAATCACCTGCATTTCCCGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAAC                                                <  SRR4302540.7882624/89‑1 (MQ=60)
                                               GTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAAC                                                <  SRR4302540.7882622/94‑1 (MQ=60)
                                               GTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAAC                                                >  SRR4302540.3760605/1‑94 (MQ=60)
                                               GTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAAC                                                <  SRR4302540.8546713/94‑1 (MQ=60)
                                               GTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAAC                                                >  SRR4302540.8425571/1‑94 (MQ=60)
                                               GTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAAC                                                <  SRR4302540.7163752/94‑1 (MQ=60)
                                                TTTTCGCGATTAATCACCTGCATTGCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACC                                               <  SRR4302540.2226710/94‑1 (MQ=60)
                                                 TTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCT                                              >  SRR4302540.790123/1‑94 (MQ=60)
                                                  TTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTG                                             >  SRR4302540.3342351/1‑94 (MQ=60)
                                                   TCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGA                                            <  SRR4302540.1168325/94‑1 (MQ=60)
                                                    CGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGAC                                           <  SRR4302540.3715407/94‑1 (MQ=60)
                                                    CGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGAC                                           <  SRR4302540.4517293/94‑1 (MQ=60)
                                                     GCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACA                                          <  SRR4302540.4175584/94‑1 (MQ=60)
                                                     GCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACA                                          <  SRR4302540.178824/94‑1 (MQ=60)
                                                      CGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAG                                         >  SRR4302540.2344734/1‑94 (MQ=60)
                                                       GATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGT                                        >  SRR4302540.8340246/1‑94 (MQ=60)
                                                        ATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTT                                       <  SRR4302540.3270445/94‑1 (MQ=60)
                                                        ATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTT                                       <  SRR4302540.6485176/94‑1 (MQ=60)
                                                        ATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTT                                       <  SRR4302540.2660624/94‑1 (MQ=60)
                                                        ATTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTT                                       >  SRR4302540.8597197/1‑94 (MQ=60)
                                                         TTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTC                                      <  SRR4302540.6714285/94‑1 (MQ=60)
                                                         TTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTC                                      >  SRR4302540.2374319/1‑94 (MQ=60)
                                                         TTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTC                                      >  SRR4302540.6369437/1‑94 (MQ=60)
                                                         TTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTC                                      >  SRR4302540.9612095/1‑94 (MQ=60)
                                                         TTAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTC                                      <  SRR4302540.6515872/94‑1 (MQ=60)
                                                          TAATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCA                                     >  SRR4302540.2399384/1‑94 (MQ=60)
                                                           AATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGCCAGTTCAA                                    >  SRR4302540.1397934/1‑94 (MQ=60)
                                                            ATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAG                                   <  SRR4302540.2469801/94‑1 (MQ=60)
                                                            ATCACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAG                                   >  SRR4302540.6690520/1‑94 (MQ=60)
                                                              CACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTA                                 >  SRR4302540.9349493/1‑94 (MQ=60)
                                                               ACCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTAT                                <  SRR4302540.3216323/94‑1 (MQ=60)
                                                                CCTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATA                               >  SRR4302540.6608179/1‑94 (MQ=60)
                                                                 CTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAA                              >  SRR4302540.4790229/1‑94 (MQ=60)
                                                                 CTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAA                              >  SRR4302540.3987334/1‑94 (MQ=60)
                                                                 CTGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAA                              >  SRR4302540.3794146/1‑94 (MQ=60)
                                                                  TGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAG                             >  SRR4302540.5060947/1‑94 (MQ=60)
                                                                  TGCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAG                             >  SRR4302540.8616910/1‑94 (MQ=60)
                                                                   GCATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGT                            >  SRR4302540.9274132/1‑94 (MQ=60)
                                                                     ATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATTAACCTGACAGTTCAAGTATAAGTCA                          >  SRR4302540.5585852/1‑94 (MQ=60)
                                                                     ATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCA                          >  SRR4302540.8260930/1‑94 (MQ=60)
                                                                     ATTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCA                          >  SRR4302540.10017176/1‑94 (MQ=60)
                                                                      TTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAG                         <  SRR4302540.6112742/94‑1 (MQ=60)
                                                                      TTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAG                         <  SRR4302540.3516312/94‑1 (MQ=60)
                                                                      TTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAG                         >  SRR4302540.5658472/1‑94 (MQ=60)
                                                                      TTTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAG                         <  SRR4302540.7050763/94‑1 (MQ=60)
                                                                       TTCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGC                        >  SRR4302540.4669167/1‑94 (MQ=60)
                                                                        TCACGGTCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCT                       <  SRR4302540.3042711/94‑1 (MQ=60)
                                                                        TCACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCT                       >  SRR4302540.7955978/1‑94 (MQ=60)
                                                                         CACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTT                      >  SRR4302540.4762023/1‑94 (MQ=60)
                                                                          ACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTG                     <  SRR4302540.6180486/94‑1 (MQ=60)
                                                                          ACGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTCG                     >  SRR4302540.9595012/1‑94 (MQ=60)
                                                                           CGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGT                    <  SRR4302540.3958092/94‑1 (MQ=60)
                                                                           CGATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGT                    <  SRR4302540.8738208/94‑1 (MQ=60)
                                                                           CGATCGGGATGGGAAAACGGACCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGT                    <  SRR4302540.9861975/94‑1 (MQ=60)
                                                                             ATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGA                  >  SRR4302540.8054677/1‑94 (MQ=60)
                                                                             ATCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGA                  <  SRR4302540.4291742/94‑1 (MQ=60)
                                                                              TCGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGAT                 <  SRR4302540.6690838/94‑1 (MQ=60)
                                                                               CGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATT                <  SRR4302540.3724924/94‑1 (MQ=60)
                                                                               CGGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATT                >  SRR4302540.9136139/1‑94 (MQ=60)
                                                                                GGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTA               >  SRR4302540.6717325/1‑94 (MQ=60)
                                                                                GGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTA               <  SRR4302540.5817649/94‑1 (MQ=60)
                                                                                GGGATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTA               >  SRR4302540.9245709/1‑94 (MQ=60)
                                                                                  GATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATT             <  SRR4302540.7968418/94‑1 (MQ=60)
                                                                                  GATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATT             >  SRR4302540.1066997/1‑94 (MQ=60)
                                                                                   ATGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTT            >  SRR4302540.2270262/1‑94 (MQ=60)
                                                                                    TGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTT           <  SRR4302540.4814061/94‑1 (MQ=60)
                                                                                    TGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTT           <  SRR4302540.1497849/94‑1 (MQ=60)
                                                                                    TGGGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTT           <  SRR4302540.6025564/94‑1 (MQ=60)
                                                                                      GGAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTT         <  SRR4302540.7074102/94‑1 (MQ=60)
                                                                                       GAAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTG        <  SRR4302540.4297901/94‑1 (MQ=60)
                                                                                        AAAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGT       <  SRR4302540.3867631/94‑1 (MQ=60)
                                                                                         AAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTT      >  SRR4302540.5101090/1‑94 (MQ=60)
                                                                                         AAACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTT      <  SRR4302540.2182538/94‑1 (MQ=60)
                                                                                          AACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTC     >  SRR4302540.7570842/1‑94 (MQ=60)
                                                                                          AACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTC     <  SRR4302540.6120654/94‑1 (MQ=60)
                                                                                          AACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTC     <  SRR4302540.10155111/94‑1 (MQ=60)
                                                                                           ACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCG    <  SRR4302540.3296724/94‑1 (MQ=60)
                                                                                           ACGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCG    <  SRR4302540.4080358/94‑1 (MQ=60)
                                                                                            CGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGC   <  SRR4302540.6958222/94‑1 (MQ=60)
                                                                                            CGGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGC   <  SRR4302540.6958224/94‑1 (MQ=60)
                                                                                             GGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCC  >  SRR4302540.6478073/1‑94 (MQ=60)
                                                                                             GGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCC  <  SRR4302540.3325270/94‑1 (MQ=60)
                                                                                             GGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCC  >  SRR4302540.4398464/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCCGCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACAGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCC  >  NC_000913/2223539‑2223725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑