Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,246,351 T→C S68G (AGT→GGT)  lysP ← lysine‑specific permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,246,3510TC100.0% 955.5 / NA 295S68G (AGT→GGT) lysPlysine‑specific permease
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (141/154);  total (141/154)

Only 100 of 302 total aligned reads displayed.

GCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACTGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGG  >  NC_000913/2246261‑2246440
                                                                                          |                                                                                         
gcgcGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCgg                                                                                         <  2:1227835/93‑1 (MQ=255)
  gcgAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGtc                                                                                       <  2:9511366/93‑1 (MQ=255)
  gcgAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGtc                                                                                       >  2:7449450/1‑93 (MQ=255)
  gcgAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGtc                                                                                       <  1:2664179/93‑1 (MQ=255)
     aaGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGtcatc                                                                                    <  2:5200375/93‑1 (MQ=255)
       gCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCACACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAg                                                                                  <  2:545792/93‑1 (MQ=255)
       gCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAg                                                                                  >  1:6314996/1‑93 (MQ=255)
       gCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAg                                                                                  >  1:718142/1‑93 (MQ=255)
       gCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAg                                                                                  >  1:8310554/1‑93 (MQ=255)
       gCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAg                                                                                  <  2:6883548/93‑1 (MQ=255)
       cccAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAg                                                                                  <  1:4548916/92‑1 (MQ=255)
          aaaGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGaa                                                                               >  1:6127207/1‑93 (MQ=255)
          aaaGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGaa                                                                               >  2:7048341/1‑93 (MQ=255)
           aaGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAg                                                                              <  2:7770421/93‑1 (MQ=255)
           aaGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAAAGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAg                                                                              >  1:1253085/1‑93 (MQ=255)
            agacttcttCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTACCCGAGACCGGTCCTCAGAAAga                                                                             >  2:6196138/4‑92 (MQ=255)
            aGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAga                                                                             >  2:7263744/1‑92 (MQ=255)
              ccTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTaa                                                                           >  2:8839999/1‑93 (MQ=255)
                ttcttcAACATAGTTCTGACCGTCAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAAc                                                                         <  2:5544186/93‑1 (MQ=255)
                 tcttcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAAcc                                                                        <  2:1705405/93‑1 (MQ=255)
                 tcttcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAAcc                                                                        <  2:1870572/93‑1 (MQ=255)
                 tcttcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAAcc                                                                        >  2:410036/1‑93 (MQ=255)
                  cttcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCa                                                                       <  1:3714398/93‑1 (MQ=255)
                  cttcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCa                                                                       >  2:3130399/1‑93 (MQ=255)
                  cttcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCa                                                                       <  1:3204824/93‑1 (MQ=255)
                  cttcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCa                                                                       >  1:4700168/1‑93 (MQ=255)
                   ttcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCAt                                                                      >  2:9679645/1‑93 (MQ=255)
                    tcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATc                                                                     >  1:7608226/1‑93 (MQ=255)
                    tcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATc                                                                     >  1:9561908/1‑93 (MQ=255)
                    tcAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATc                                                                     <  1:1510286/93‑1 (MQ=255)
                     cAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCa                                                                    >  1:518909/1‑93 (MQ=255)
                     cAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCa                                                                    <  2:452786/93‑1 (MQ=255)
                      aaCATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGCAAACCATCAg                                                                   >  2:3371491/1‑93 (MQ=255)
                         aTAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGcc                                                                >  1:9733913/1‑93 (MQ=255)
                         aTAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGcc                                                                <  2:9271822/93‑1 (MQ=255)
                           aGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCaa                                                              >  1:7066914/1‑93 (MQ=255)
                           aGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCAACAGGAAGTAAACCATCAGGCCaa                                                              <  1:9080467/93‑1 (MQ=255)
                            gTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAAt                                                             <  2:275851/93‑1 (MQ=255)
                            gTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAAt                                                             >  1:7878729/1‑93 (MQ=255)
                             ttCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATc                                                            <  1:4120028/93‑1 (MQ=255)
                             ttCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATc                                                            <  1:9240336/93‑1 (MQ=255)
                               cTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAg                                                          <  1:3353917/93‑1 (MQ=255)
                                 gACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCa                                                        <  1:248429/93‑1 (MQ=255)
                                 gACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCa                                                        <  2:3851322/93‑1 (MQ=255)
                                  aCCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCat                                                       <  2:8528249/93‑1 (MQ=255)
                                   ccGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCata                                                      <  2:9567635/93‑1 (MQ=255)
                                    cGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCatat                                                     >  2:4893585/1‑93 (MQ=255)
                                    cGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCatat                                                     <  1:9907398/93‑1 (MQ=255)
                                     gTAAGTGGCAAACGATCCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCAtata                                                    <  2:8989233/93‑1 (MQ=255)
                                     gTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCAtata                                                    >  2:6707621/1‑93 (MQ=255)
                                      tAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATAc                                                   >  1:2804480/1‑93 (MQ=255)
                                      tAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATAc                                                   >  1:4275137/1‑93 (MQ=255)
                                       aaGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACg                                                  <  1:9002457/93‑1 (MQ=255)
                                       aaGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACg                                                  <  1:1343599/93‑1 (MQ=255)
                                         gTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACgag                                                >  2:7881493/1‑93 (MQ=255)
                                         gTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACgag                                                <  1:4022889/93‑1 (MQ=255)
                                          tGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACgaga                                               <  2:8190059/93‑1 (MQ=255)
                                          tGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACgaga                                               <  2:1494605/93‑1 (MQ=255)
                                            gCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCACATACGAGAGc                                             <  2:6311508/93‑1 (MQ=255)
                                              aaaCGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCaa                                           >  1:2124986/1‑93 (MQ=255)
                                               aaCGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAAt                                          >  2:5119205/1‑93 (MQ=255)
                                               aaCGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAAt                                          <  1:998193/93‑1 (MQ=255)
                                               aaCGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAAt                                          >  2:2256962/1‑93 (MQ=255)
                                                   aaCCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGATAGCAATGccc                                      >  1:9333472/1‑93 (MQ=255)
                                                   aaCCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGccc                                      >  1:10037627/1‑93 (MQ=255)
                                                   aaCCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGCAAACCATCAGGCCAATCAGCATATACGAGAGCAATGccc                                      <  1:6856701/93‑1 (MQ=255)
                                                    aCCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGcccc                                     <  1:8623947/93‑1 (MQ=255)
                                                    aCCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGcccc                                     <  1:8230014/93‑1 (MQ=255)
                                                     ccGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCcccg                                    >  2:8404222/1‑93 (MQ=255)
                                                        gAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCcccgccc                                 >  2:3471312/1‑93 (MQ=255)
                                                            ccGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGTATATACGAGAGCAATGCCCCGCCCGGAc                             >  1:110222/1‑93 (MQ=255)
                                                            ccGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGAc                             <  2:3986697/93‑1 (MQ=255)
                                                             cGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGAcc                            <  2:5762250/93‑1 (MQ=255)
                                                              ggCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGAccg                           >  1:8082037/1‑92 (MQ=255)
                                                               gCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGAcctg                          >  2:2082694/1‑93 (MQ=255)
                                                               gCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGAcctg                          <  2:1019847/93‑1 (MQ=255)
                                                                 atatatGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGAcctgcc                        >  2:2955915/1‑93 (MQ=255)
                                                                 atatatGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGAcctgcc                        <  1:3130399/93‑1 (MQ=255)
                                                                 atatatGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGAcctgcc                        >  1:3808628/1‑93 (MQ=255)
                                                                  tatatGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGAcctgcct                       >  2:1121550/1‑93 (MQ=255)
                                                                    tatGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTga                     >  1:1200496/1‑93 (MQ=255)
                                                                    tatGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTga                     <  1:169484/93‑1 (MQ=255)
                                                                        cAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGaaa                 <  1:2310921/93‑1 (MQ=255)
                                                                         aGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAAt                <  1:6594240/93‑1 (MQ=255)
                                                                           ccAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCg              >  1:4783744/1‑93 (MQ=255)
                                                                            cAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGt             >  2:594131/1‑93 (MQ=255)
                                                                            cAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGt             <  1:5795108/93‑1 (MQ=255)
                                                                            cAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGt             >  2:6615822/1‑93 (MQ=255)
                                                                            cAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGt             <  1:184983/93‑1 (MQ=255)
                                                                             aGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGtt            <  1:5412895/93‑1 (MQ=255)
                                                                              tttCACCGAGACCGGTCATCAGGAAGTAAACAATCAGGCCAATCAGCATATACGAGATCAATGCCCCGCCCGGACTTGCCTGAGAGAttgttg           >  2:7693264/2‑93 (MQ=255)
                                                                              gTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTg           <  1:2885254/93‑1 (MQ=255)
                                                                              gTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTg           >  1:6468213/1‑93 (MQ=255)
                                                                              gTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTg           >  2:3706428/1‑93 (MQ=255)
                                                                               ttCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTgc          >  1:5007803/1‑93 (MQ=255)
                                                                               ttCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTgc          >  2:2460397/1‑93 (MQ=255)
                                                                                  aCCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGcc       >  1:4790916/1‑93 (MQ=255)
                                                                                   ccGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCa      >  1:5451603/1‑93 (MQ=255)
                                                                                    cGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCag     >  1:6376127/1‑93 (MQ=255)
                                                                                     gagaCCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCaga    <  1:1431370/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACTGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGG  >  NC_000913/2246261‑2246440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACTGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGGCAAC  >  NC_000913/2246258‑2246444
                                                                                             |                                                                                             
CCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACC                                                                                               <  SRR4302540.3087010/94‑1 (MQ=60)
CCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACC                                                                                               <  SRR4302540.5296951/94‑1 (MQ=60)
 CAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCG                                                                                              <  SRR4302540.9993757/94‑1 (MQ=60)
    CGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTC                                                                                           <  SRR4302540.3774381/94‑1 (MQ=60)
    CGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTC                                                                                           <  SRR4302540.1299178/94‑1 (MQ=60)
     GCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCA                                                                                          <  SRR4302540.2693071/94‑1 (MQ=60)
     GCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCA                                                                                          >  SRR4302540.240551/1‑94 (MQ=60)
      CGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCAT                                                                                         <  SRR4302540.3198285/94‑1 (MQ=60)
      CGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCAT                                                                                         >  SRR4302540.5058835/1‑94 (MQ=60)
        AAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCGCCGAGACCGGTCATCA                                                                                       <  SRR4302540.2865840/94‑1 (MQ=60)
         AGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAG                                                                                      >  SRR4302540.725846/1‑94 (MQ=60)
         AGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAG                                                                                      >  SRR4302540.3136813/1‑94 (MQ=60)
         AGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAG                                                                                      >  SRR4302540.8407030/1‑94 (MQ=60)
         AGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAG                                                                                      <  SRR4302540.5478931/94‑1 (MQ=60)
         AGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAG                                                                                      >  SRR4302540.6385319/1‑94 (MQ=60)
          CCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGG                                                                                     <  SRR4302540.4598122/94‑1 (MQ=60)
           CCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGA                                                                                    <  SRR4302540.1804072/94‑1 (MQ=60)
            CAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAA                                                                                   <  SRR4302540.1229080/94‑1 (MQ=60)
            CAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAA                                                                                   >  SRR4302540.6195448/1‑94 (MQ=60)
            CAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAA                                                                                   >  SRR4302540.1179888/1‑94 (MQ=60)
             AAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAG                                                                                  <  SRR4302540.3801070/94‑1 (MQ=60)
             AAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAG                                                                                  <  SRR4302540.1139873/94‑1 (MQ=60)
             AAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAG                                                                                  >  SRR4302540.1719179/1‑94 (MQ=60)
             AAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAAAGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAG                                                                                  >  SRR4302540.1265911/1‑94 (MQ=60)
               AGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTA                                                                                <  SRR4302540.6391524/94‑1 (MQ=60)
               AGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTA                                                                                <  SRR4302540.9186894/94‑1 (MQ=60)
               AGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTA                                                                                <  SRR4302540.9186895/94‑1 (MQ=60)
                GCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAA                                                                               <  SRR4302540.3176672/94‑1 (MQ=60)
                 CCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAA                                                                              >  SRR4302540.9374423/1‑94 (MQ=60)
                  CTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAAC                                                                             >  SRR4302540.8233579/1‑94 (MQ=60)
                  CTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAAC                                                                             <  SRR4302540.9546020/94‑1 (MQ=60)
                  CTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAAC                                                                             >  SRR4302540.4416733/1‑94 (MQ=60)
                   TTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACC                                                                            <  SRR4302540.7726672/94‑1 (MQ=60)
                   TTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACC                                                                            <  SRR4302540.5816117/94‑1 (MQ=60)
                    TCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCA                                                                           >  SRR4302540.4750406/1‑94 (MQ=60)
                     CTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCAT                                                                          <  SRR4302540.3239630/94‑1 (MQ=60)
                     CTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCAT                                                                          <  SRR4302540.3754929/94‑1 (MQ=60)
                     CTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCAT                                                                          <  SRR4302540.5508067/94‑1 (MQ=60)
                     CTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCAT                                                                          >  SRR4302540.1626567/1‑94 (MQ=60)
                      TTCAACATAGTTCTTACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCTCCGAGACCGGTCATCAGGAAGTAAACCATC                                                                         <  SRR4302540.3348602/94‑1 (MQ=60)
                      TTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATC                                                                         >  SRR4302540.9674947/1‑94 (MQ=60)
                      TTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATC                                                                         <  SRR4302540.483664/94‑1 (MQ=60)
                      TTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATC                                                                         <  SRR4302540.599034/94‑1 (MQ=60)
                      TTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATC                                                                         >  SRR4302540.7693722/1‑94 (MQ=60)
                       TCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCA                                                                        <  SRR4302540.1526974/94‑1 (MQ=60)
                       TCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCA                                                                        >  SRR4302540.524474/1‑94 (MQ=60)
                        CAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAG                                                                       <  SRR4302540.6030054/94‑1 (MQ=60)
                        CAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAG                                                                       <  SRR4302540.8860747/94‑1 (MQ=60)
                        CAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAG                                                                       <  SRR4302540.9639859/94‑1 (MQ=60)
                          ACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGC                                                                     <  SRR4302540.1487125/94‑1 (MQ=60)
                           CATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCC                                                                    >  SRR4302540.9848210/1‑94 (MQ=60)
                            ATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCA                                                                   >  SRR4302540.3747748/1‑94 (MQ=60)
                             TAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAA                                                                  >  SRR4302540.7145511/1‑94 (MQ=60)
                              AGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAAT                                                                 >  SRR4302540.7970742/1‑94 (MQ=60)
                              AGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAAT                                                                 <  SRR4302540.8329845/94‑1 (MQ=60)
                              AGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCAACAGGAAGTAAACCATCAGGCCAAT                                                                 <  SRR4302540.9189550/94‑1 (MQ=60)
                               GTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATC                                                                <  SRR4302540.662499/94‑1 (MQ=60)
                               GTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATC                                                                >  SRR4302540.7846253/1‑94 (MQ=60)
                                TTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCA                                                               <  SRR4302540.9351020/94‑1 (MQ=60)
                                TTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCA                                                               <  SRR4302540.4164513/94‑1 (MQ=60)
                                TTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCA                                                               <  SRR4302540.4164512/94‑1 (MQ=60)
                                TTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCA                                                               <  SRR4302540.1080156/94‑1 (MQ=60)
                                  CTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGC                                                             <  SRR4302540.3390676/94‑1 (MQ=60)
                                  CTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGC                                                             <  SRR4302540.2306429/94‑1 (MQ=60)
                                   TGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCA                                                            <  SRR4302540.6267627/94‑1 (MQ=60)
                                    GACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGCGACCGGTCATCAGGACGTAAACCATCAGGCCAATCAGCAT                                                           >  SRR4302540.7692571/1‑94 (MQ=60)
                                    GACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCAT                                                           <  SRR4302540.250834/94‑1 (MQ=60)
                                     ACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATA                                                          <  SRR4302540.9777609/94‑1 (MQ=60)
                                      CCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATAT                                                         >  SRR4302540.9318615/1‑94 (MQ=60)
                                       CGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATA                                                        >  SRR4302540.7471592/1‑94 (MQ=60)
                                       CGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATA                                                        <  SRR4302540.4866731/94‑1 (MQ=60)
                                       CGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATA                                                        <  SRR4302540.10023128/94‑1 (MQ=60)
                                        GTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATAC                                                       >  SRR4302540.2834768/1‑94 (MQ=60)
                                        GTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATAC                                                       >  SRR4302540.4719969/1‑94 (MQ=60)
                                        GTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATAC                                                       <  SRR4302540.5357787/94‑1 (MQ=60)
                                        GTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATAC                                                       >  SRR4302540.4321637/1‑94 (MQ=60)
                                        GTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGCAAACCATCAGGCCAATCAGCATATAC                                                       >  SRR4302540.129454/1‑94 (MQ=60)
                                         TAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACG                                                      >  SRR4302540.8139171/1‑94 (MQ=60)
                                          AAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGA                                                     <  SRR4302540.1357691/94‑1 (MQ=60)
                                          AAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGA                                                     <  SRR4302540.2059958/94‑1 (MQ=60)
                                          AAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGA                                                     <  SRR4302540.9110462/94‑1 (MQ=60)
                                          AAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGAATATACGA                                                     >  SRR4302540.2796248/1‑94 (MQ=60)
                                           AGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAG                                                    >  SRR4302540.6316026/1‑94 (MQ=60)
                                            GTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGA                                                   <  SRR4302540.3631085/94‑1 (MQ=60)
                                            GTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGA                                                   <  SRR4302540.4066248/94‑1 (MQ=60)
                                              GGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGC                                                 <  SRR4302540.8424460/94‑1 (MQ=60)
                                              GGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGC                                                 <  SRR4302540.9944961/94‑1 (MQ=60)
                                                CAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAA                                               >  SRR4302540.2147785/1‑94 (MQ=60)
                                                 AAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAAT                                              <  SRR4302540.4400262/94‑1 (MQ=60)
                                                  AACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATG                                             <  SRR4302540.1008342/94‑1 (MQ=60)
                                                   ACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGC                                            <  SRR4302540.3251020/94‑1 (MQ=60)
                                                   ACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGC                                            <  SRR4302540.9385760/94‑1 (MQ=60)
                                                   ACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGC                                            >  SRR4302540.515450/1‑94 (MQ=60)
                                                   ACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGC                                            <  SRR4302540.9301740/94‑1 (MQ=60)
                                                    CGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCC                                           <  SRR4302540.6460599/94‑1 (MQ=60)
                                                    CGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCC                                           <  SRR4302540.6460598/94‑1 (MQ=60)
                                                    CGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCC                                           <  SRR4302540.4753386/94‑1 (MQ=60)
                                                     GAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGATAGCAATGCCC                                          >  SRR4302540.9444752/1‑94 (MQ=60)
                                                     GAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCC                                          >  SRR4302540.10154351/1‑94 (MQ=60)
                                                      AACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCC                                         <  SRR4302540.10160924/94‑1 (MQ=60)
                                                      AACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCC                                         <  SRR4302540.8304394/94‑1 (MQ=60)
                                                      AACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCC                                         <  SRR4302540.6932670/94‑1 (MQ=60)
                                                      AACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGCAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCC                                         <  SRR4302540.6932671/94‑1 (MQ=60)
                                                       ACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCG                                        <  SRR4302540.5235872/94‑1 (MQ=60)
                                                       ACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCG                                        <  SRR4302540.8724124/94‑1 (MQ=60)
                                                       ACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCG                                        <  SRR4302540.8325682/94‑1 (MQ=60)
                                                       ACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCG                                        <  SRR4302540.8325680/94‑1 (MQ=60)
                                                        CCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGC                                       >  SRR4302540.9805741/1‑94 (MQ=60)
                                                          GGAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCC                                     >  SRR4302540.5444759/1‑94 (MQ=60)
                                                           GAAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCG                                    <  SRR4302540.10114425/94‑1 (MQ=60)
                                                            AAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGG                                   <  SRR4302540.6407082/94‑1 (MQ=60)
                                                            AAACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGA                                   >  SRR4302540.5845499/1‑94 (MQ=60)
                                                              ACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGTATATACGAGAGCAATGCCCCGCCCGGAC                                 >  SRR4302540.111396/1‑94 (MQ=60)
                                                              ACCGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGAC                                 >  SRR4302540.4216581/1‑94 (MQ=60)
                                                                CGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCT                               >  SRR4302540.1235801/1‑94 (MQ=60)
                                                                CGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCT                               <  SRR4302540.2522001/94‑1 (MQ=60)
                                                                CGGCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCG                               >  SRR4302540.8175842/1‑94 (MQ=60)
                                                                  GCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGC                             >  SRR4302540.1491479/1‑94 (MQ=60)
                                                                  GCATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGC                             >  SRR4302540.392751/1‑94 (MQ=60)
                                                                   CATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCC                            >  SRR4302540.3850108/1‑94 (MQ=60)
                                                                    ATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCT                           <  SRR4302540.3164563/94‑1 (MQ=60)
                                                                    ATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCT                           >  SRR4302540.6567347/1‑94 (MQ=60)
                                                                    ATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCT                           >  SRR4302540.136565/1‑94 (MQ=60)
                                                                    ATATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCT                           >  SRR4302540.8698613/1‑94 (MQ=60)
                                                                      ATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGA                         >  SRR4302540.1212843/1‑94 (MQ=60)
                                                                      ATATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGA                         >  SRR4302540.2324745/1‑94 (MQ=60)
                                                                       TATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAG                        >  SRR4302540.10070123/1‑94 (MQ=60)
                                                                       TATGCAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAG                        <  SRR4302540.171181/94‑1 (MQ=60)
                                                                           CAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAAT                    <  SRR4302540.2335794/94‑1 (MQ=60)
                                                                           CAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAAT                    <  SRR4302540.3148671/94‑1 (MQ=60)
                                                                           CAGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAAT                    >  SRR4302540.1398358/1‑94 (MQ=60)
                                                                            AGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATC                   <  SRR4302540.801260/94‑1 (MQ=60)
                                                                            AGCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATC                   <  SRR4302540.6667274/94‑1 (MQ=60)
                                                                             GCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCT                  >  SRR4302540.4834882/1‑94 (MQ=60)
                                                                             GCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCG                  <  SRR4302540.7070992/94‑1 (MQ=60)
                                                                             GCCAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCG                  >  SRR4302540.4834881/1‑94 (MQ=60)
                                                                               CAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTT                >  SRR4302540.390896/1‑94 (MQ=60)
                                                                               CAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTT                <  SRR4302540.186823/94‑1 (MQ=60)
                                                                               CAGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTT                <  SRR4302540.5859144/94‑1 (MQ=60)
                                                                                AGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTG               >  SRR4302540.6540186/1‑94 (MQ=60)
                                                                                AGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTG               >  SRR4302540.4811982/1‑94 (MQ=60)
                                                                                AGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTG               >  SRR4302540.9609523/1‑94 (MQ=60)
                                                                                AGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTG               <  SRR4302540.5472408/94‑1 (MQ=60)
                                                                                AGTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTG               >  SRR4302540.1870857/1‑94 (MQ=60)
                                                                                 GTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGC              >  SRR4302540.2702384/1‑94 (MQ=60)
                                                                                 GTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGC              >  SRR4302540.5062035/1‑94 (MQ=60)
                                                                                 GTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGC              >  SRR4302540.7219040/1‑94 (MQ=60)
                                                                                 GTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGC              <  SRR4302540.2916662/94‑1 (MQ=60)
                                                                                 GTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGC              <  SRR4302540.1580250/94‑1 (MQ=60)
                                                                                 GTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGC              >  SRR4302540.7219039/1‑94 (MQ=60)
                                                                                 GTTCACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGC              <  SRR4302540.6701896/94‑1 (MQ=60)
                                                                                    CACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCC           >  SRR4302540.4842157/1‑94 (MQ=60)
                                                                                     ACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCA          <  SRR4302540.7117983/94‑1 (MQ=60)
                                                                                     ACCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCA          >  SRR4302540.5511599/1‑94 (MQ=60)
                                                                                      CCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAG         <  SRR4302540.8771822/94‑1 (MQ=60)
                                                                                      CCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAG         >  SRR4302540.6447119/1‑94 (MQ=60)
                                                                                      CCGAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATAGACGAGAGCAATGCCCCGCCAGGACCTGCCTGAGAAATCGTTGCGCCAG         <  SRR4302540.4281238/94‑1 (MQ=60)
                                                                                        GAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAG       <  SRR4302540.1446881/94‑1 (MQ=60)
                                                                                        GAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAG       <  SRR4302540.9900160/94‑1 (MQ=60)
                                                                                        GAGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAG       >  SRR4302540.2622397/1‑94 (MQ=60)
                                                                                         AGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGG      <  SRR4302540.10075067/94‑1 (MQ=60)
                                                                                         AGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGG      >  SRR4302540.2412159/1‑94 (MQ=60)
                                                                                         AGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGG      <  SRR4302540.2876479/94‑1 (MQ=60)
                                                                                         AGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGG      <  SRR4302540.4669738/94‑1 (MQ=60)
                                                                                         AGACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCGGAGAAATCGTTGCccaagcgg      >  SRR4302540.2412162/1‑86 (MQ=60)
                                                                                          GACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGGC     <  SRR4302540.4134207/94‑1 (MQ=60)
                                                                                           ACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGGCA    <  SRR4302540.3901127/94‑1 (MQ=60)
                                                                                           ACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGGCA    <  SRR4302540.4896652/94‑1 (MQ=60)
                                                                                           ACCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGACGCA    >  SRR4302540.6841940/1‑94 (MQ=60)
                                                                                            CCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGGCAA   >  SRR4302540.1840438/1‑94 (MQ=60)
                                                                                            CCGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGGCAA   >  SRR4302540.6969119/1‑94 (MQ=60)
                                                                                             CGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGGCAAC  <  SRR4302540.234780/94‑1 (MQ=60)
                                                                                             CGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGGCAAC  <  SRR4302540.4028326/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGTAAGTGGCAAACGAACCGGAAACCGGCATATATGCAGCCAGTTCACCGAGACTGGTCATCAGGAAGTAAACCATCAGGCCAATCAGCATATACGAGAGCAATGCCCCGCCCGGACCTGCCTGAGAAATCGTTGCGCCAGAGGCAAC  >  NC_000913/2246258‑2246444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑