Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,309,476 C→T A27T (GCC→ACC)  yojL ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,309,4760CT99.7% 1133.0 / NA 318A27T (GCC→ACC) yojLhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (177/140);  total (178/140)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 330 total aligned reads displayed.

GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATC  >  NC_000913/2309386‑2309565
                                                                                          |                                                                                         
gTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTtggtgg                                                                                         >  1:1895239/1‑93 (MQ=255)
 tttGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTggg                                                                                        >  1:788629/1‑93 (MQ=255)
    ggCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTtg                                                                                     >  1:8277333/1‑93 (MQ=255)
     gCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTtgt                                                                                    >  2:6995506/1‑93 (MQ=255)
        tCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGt                                                                                 >  1:2646921/1‑93 (MQ=255)
        tCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGt                                                                                 <  1:381493/93‑1 (MQ=255)
        tCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGt                                                                                 >  1:1355059/1‑93 (MQ=255)
        tCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGt                                                                                 <  2:6095710/93‑1 (MQ=255)
         cAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGtt                                                                                >  2:2381815/1‑93 (MQ=255)
         cAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGtt                                                                                <  1:8863833/93‑1 (MQ=255)
          aaTGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGttt                                                                               >  1:6242091/1‑93 (MQ=255)
           aTGCCCGGGATGCTGGCACGCCAGAAGGTACCGATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTCGGTTTTGGTGGGTTGTGGtttt                                                                              >  2:3049900/1‑93 (MQ=255)
           aTGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGtttt                                                                              >  1:9896750/1‑93 (MQ=255)
           aTGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGtttt                                                                              <  1:5274167/93‑1 (MQ=255)
               ccGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGAt                                                                          >  1:8123717/1‑93 (MQ=255)
                 gggATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCg                                                                        <  1:35008/93‑1 (MQ=255)
                  ggATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGc                                                                       <  1:8818577/93‑1 (MQ=255)
                  ggATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGc                                                                       <  1:4803658/93‑1 (MQ=255)
                    aTGCTGGCACGCCAGAAGGTACCAATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaa                                                                     <  2:5599494/93‑1 (MQ=255)
                     tGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaac                                                                    >  2:9683701/1‑93 (MQ=255)
                     tGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaac                                                                    <  2:5672035/93‑1 (MQ=255)
                       cTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaacca                                                                  >  2:4070966/1‑93 (MQ=255)
                        tGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaaccaa                                                                 <  1:1280008/93‑1 (MQ=255)
                         ggCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaaccaac                                                                <  2:8852608/93‑1 (MQ=255)
                           cACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACcaacaa                                                              <  2:1896812/93‑1 (MQ=255)
                            aCGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACaaa                                                             >  2:2488696/1‑93 (MQ=255)
                             cGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaag                                                            >  2:4543795/1‑93 (MQ=255)
                             cGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaag                                                            <  2:2985584/93‑1 (MQ=255)
                              gCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaaga                                                           <  1:3324716/93‑1 (MQ=255)
                              gCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaaga                                                           <  1:1482237/93‑1 (MQ=255)
                               ccAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaa                                                          <  1:4619926/93‑1 (MQ=255)
                                 aGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAagaaga                                                        >  2:958927/1‑93 (MQ=255)
                                  gAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAagag                                                       <  2:1445535/93‑1 (MQ=255)
                                   aaGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgc                                                      <  2:2038171/93‑1 (MQ=255)
                                   aaGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgc                                                      <  2:806553/93‑1 (MQ=255)
                                   aaGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgc                                                      <  2:6683237/93‑1 (MQ=255)
                                     ggTACCCATAGTTTTGCCTTCAAGAACGGTAAATTCAGCAGCGTGGGTTTTGGTTGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgcgc                                                    >  2:3503113/1‑93 (MQ=255)
                                      gTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGcgcg                                                   <  1:5795482/93‑1 (MQ=255)
                                      gTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGcgcg                                                   >  1:5592301/1‑93 (MQ=255)
                                        aCCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGc                                                 <  2:6400800/93‑1 (MQ=255)
                                         cccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGca                                                >  2:4606696/1‑93 (MQ=255)
                                         cccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGca                                                <  1:9240481/93‑1 (MQ=255)
                                         cccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGca                                                <  1:4864920/93‑1 (MQ=255)
                                         cccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGca                                                >  2:6282580/1‑93 (MQ=255)
                                         cccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGca                                                >  2:9369849/1‑93 (MQ=255)
                                          ccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcag                                               >  1:4423677/1‑93 (MQ=255)
                                           cATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagc                                              >  1:5730752/1‑93 (MQ=255)
                                            aTAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagcc                                             >  1:5057938/1‑93 (MQ=255)
                                            aTAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagcc                                             <  2:2638991/93‑1 (MQ=255)
                                            aTAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagcc                                             <  2:4972978/93‑1 (MQ=255)
                                             tAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagcca                                            >  1:4049574/1‑93 (MQ=255)
                                             tAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagcca                                            >  2:916858/1‑93 (MQ=255)
                                             tAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagcca                                            <  1:254318/93‑1 (MQ=255)
                                              aGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagccag                                           >  2:8421276/1‑93 (MQ=255)
                                               gTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagccagc                                          >  1:5484804/1‑93 (MQ=255)
                                                ttttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagca                                         <  2:2760002/93‑1 (MQ=255)
                                                 tttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagcag                                        <  1:1711118/93‑1 (MQ=255)
                                                 tttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagcag                                        >  1:9362547/1‑93 (MQ=255)
                                                   tGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTg                                      >  1:2459427/1‑93 (MQ=255)
                                                    gCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGc                                     >  2:7097035/1‑93 (MQ=255)
                                                     ccTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGcc                                    >  2:179572/1‑93 (MQ=255)
                                                     ccTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGcc                                    >  2:3425573/1‑93 (MQ=255)
                                                      cTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCa                                   <  1:7474532/93‑1 (MQ=255)
                                                       ttCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAc                                  >  2:5229124/1‑93 (MQ=255)
                                                       ttCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAc                                  >  2:3688546/1‑93 (MQ=255)
                                                          aaGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcgcg                               >  1:8960678/1‑93 (MQ=255)
                                                          aaGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcgcg                               <  1:4076190/93‑1 (MQ=255)
                                                           aGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCgg                              >  2:488389/1‑93 (MQ=255)
                                                             aaCGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCggga                            >  2:7595272/1‑92 (MQ=255)
                                                              aCGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTa                           <  2:680950/93‑1 (MQ=255)
                                                              aCGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTa                           >  1:4948729/1‑93 (MQ=255)
                                                                ggTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTaaa                         <  1:4385904/93‑1 (MQ=255)
                                                                 gTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAg                        >  2:2925520/1‑93 (MQ=255)
                                                                 gTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAg                        >  1:4240164/1‑93 (MQ=255)
                                                                    aCTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGTGTAAAGCtt                     >  1:1178801/1‑93 (MQ=255)
                                                                     cTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTa                    <  1:6512506/93‑1 (MQ=255)
                                                                     cTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAATGTCACGCGGGTACAGCttt                    >  1:6632543/1‑92 (MQ=255)
                                                                     cTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTGTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTa                    <  2:4756846/93‑1 (MQ=255)
                                                                      ttCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAt                   >  1:6356892/1‑93 (MQ=255)
                                                                       tCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAtt                  <  1:1218563/93‑1 (MQ=255)
                                                                          gTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTcc               >  2:8637602/1‑93 (MQ=255)
                                                                           tAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCa              <  2:2172715/93‑1 (MQ=255)
                                                                           tAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCa              <  1:5135946/93‑1 (MQ=255)
                                                                           tAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCa              <  1:6714559/93‑1 (MQ=255)
                                                                           tAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCa              >  1:718517/1‑93 (MQ=255)
                                                                           tAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCa              <  1:730486/93‑1 (MQ=255)
                                                                            aGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAt             >  1:769975/1‑93 (MQ=255)
                                                                            aGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAt             <  2:8390205/93‑1 (MQ=255)
                                                                              cGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATAc           >  1:9154993/1‑93 (MQ=255)
                                                                               gTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACg          >  2:7894078/1‑93 (MQ=255)
                                                                                tGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGt         >  2:8264695/1‑93 (MQ=255)
                                                                                tGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGt         >  1:871610/1‑93 (MQ=255)
                                                                                tGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGt         >  2:118937/1‑93 (MQ=255)
                                                                                tGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGt         >  2:3204179/1‑93 (MQ=255)
                                                                                 gggTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTg        >  1:7970689/1‑93 (MQ=255)
                                                                                   gTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGAt      <  2:7443841/93‑1 (MQ=255)
                                                                                     tttGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTa    >  2:7237878/1‑93 (MQ=255)
                                                                                     tttGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTa    <  2:3736090/93‑1 (MQ=255)
                                                                                     tttGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTa    <  2:2306283/93‑1 (MQ=255)
                                                                                       tggtggGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATc  >  1:1660825/1‑93 (MQ=255)
                                                                                          |                                                                                         
GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATC  >  NC_000913/2309386‑2309565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTCA  >  NC_000913/2309383‑2309569
                                                                                             |                                                                                             
TGCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGT                                                                                               <  SRR4302540.6158316/94‑1 (MQ=60)
TGCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGT                                                                                               <  SRR4302540.6158317/94‑1 (MQ=60)
TGCGTTTGGCGTCAATGCCCGGGATGCGGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGT                                                                                               <  SRR4302540.2462738/94‑1 (MQ=60)
 GCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTG                                                                                              <  SRR4302540.1707610/94‑1 (MQ=60)
 GCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTG                                                                                              >  SRR4302540.5274474/1‑94 (MQ=60)
 GCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTG                                                                                              >  SRR4302540.7316741/1‑94 (MQ=60)
  gtTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGG                                                                                             <  SRR4302540.7725871/92‑1 (MQ=60)
  CGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGG                                                                                             >  SRR4302540.1915979/1‑94 (MQ=60)
  CGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGG                                                                                             <  SRR4302540.7725870/94‑1 (MQ=60)
  CGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGG                                                                                             >  SRR4302540.4444735/1‑94 (MQ=60)
   GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGG                                                                                            >  SRR4302540.488254/1‑94 (MQ=60)
   GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGG                                                                                            >  SRR4302540.797012/1‑94 (MQ=60)
   GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGG                                                                                            >  SRR4302540.8924790/1‑94 (MQ=60)
   GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGG                                                                                            >  SRR4302540.4612815/1‑94 (MQ=60)
   GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGG                                                                                            >  SRR4302540.6533240/1‑94 (MQ=60)
   GTTTGGCGTCAATGCCCGGACCGCTGGCGCGCCAGAAGGTACCCATCGTTTTGCCTTCAAGCACGGTAACTACAGTAGCGTGGGTTTTGGTGGG                                                                                            >  SRR4302540.8924788/1‑94 (MQ=60)
     TTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTT                                                                                          <  SRR4302540.7290442/94‑1 (MQ=60)
     TTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTT                                                                                          <  SRR4302540.9334459/94‑1 (MQ=60)
      TGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTG                                                                                         >  SRR4302540.8373481/1‑94 (MQ=60)
       GGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGT                                                                                        >  SRR4302540.8974123/1‑94 (MQ=60)
         CGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGG                                                                                      <  SRR4302540.1381816/94‑1 (MQ=60)
          GTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGT                                                                                     >  SRR4302540.1369328/1‑94 (MQ=60)
          GTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGT                                                                                     >  SRR4302540.1252578/1‑94 (MQ=60)
          GTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGT                                                                                     >  SRR4302540.6374256/1‑94 (MQ=60)
          GTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGT                                                                                     <  SRR4302540.704697/94‑1 (MQ=60)
          GTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGT                                                                                     >  SRR4302540.2675634/1‑94 (MQ=60)
           TCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTT                                                                                    <  SRR4302540.385436/94‑1 (MQ=60)
            CAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTT                                                                                   <  SRR4302540.8966404/94‑1 (MQ=60)
            CAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTT                                                                                   >  SRR4302540.6311559/1‑94 (MQ=60)
            CAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTT                                                                                   >  SRR4302540.6265623/1‑94 (MQ=60)
             AATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTT                                                                                  >  SRR4302540.10012331/1‑94 (MQ=60)
              ATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTT                                                                                 >  SRR4302540.9070888/1‑94 (MQ=60)
              ATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTT                                                                                 <  SRR4302540.5331748/94‑1 (MQ=60)
                GCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGA                                                                               <  SRR4302540.10083816/94‑1 (MQ=60)
                 CCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGAT                                                                              <  SRR4302540.7504095/94‑1 (MQ=60)
                 CCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGAT                                                                              >  SRR4302540.8218006/1‑94 (MQ=60)
                  CCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATC                                                                             >  SRR4302540.5023487/1‑94 (MQ=60)
                  CCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATC                                                                             >  SRR4302540.4761616/1‑94 (MQ=60)
                  CCGGGATGCTGGCACGCCAGAAGGGACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATC                                                                             >  SRR4302540.450486/1‑94 (MQ=60)
                   CGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCG                                                                            >  SRR4302540.1377949/1‑94 (MQ=60)
                    GGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGC                                                                           <  SRR4302540.35376/94‑1 (MQ=60)
                    GGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGC                                                                           >  SRR4302540.6661721/1‑94 (MQ=60)
                     GGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCA                                                                          <  SRR4302540.4855068/94‑1 (MQ=60)
                     GGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCA                                                                          <  SRR4302540.8683716/94‑1 (MQ=60)
                     GGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCA                                                                          <  SRR4302540.8920538/94‑1 (MQ=60)
                      GATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAA                                                                         >  SRR4302540.5646566/1‑94 (MQ=60)
                       ATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAAC                                                                        >  SRR4302540.8043902/1‑94 (MQ=60)
                        TGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACC                                                                       <  SRR4302540.6676664/94‑1 (MQ=60)
                         GCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCA                                                                      <  SRR4302540.5155541/94‑1 (MQ=60)
                         GCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCA                                                                      <  SRR4302540.5155540/94‑1 (MQ=60)
                         GCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCA                                                                      <  SRR4302540.5031721/94‑1 (MQ=60)
                          CTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGGTTTTGATCGCAACCAA                                                                     >  SRR4302540.9088847/1‑94 (MQ=60)
                           TGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAAC                                                                    <  SRR4302540.1293202/94‑1 (MQ=60)
                           TGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAAC                                                                    >  SRR4302540.5557019/1‑94 (MQ=60)
                            GGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACA                                                                   <  SRR4302540.3994945/94‑1 (MQ=60)
                            GGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACA                                                                   <  SRR4302540.1228972/94‑1 (MQ=60)
                               ACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAG                                                                >  SRR4302540.576728/1‑94 (MQ=60)
                                 GCCAGAAGGTATCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGTTTTTTGATCGCAACCAACAAAGAA                                                              <  SRR4302540.7551516/94‑1 (MQ=60)
                                 GCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAA                                                              <  SRR4302540.7551517/94‑1 (MQ=60)
                                 GCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAA                                                              <  SRR4302540.3361190/94‑1 (MQ=60)
                                 GCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAA                                                              <  SRR4302540.5423604/94‑1 (MQ=60)
                                 GCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAA                                                              >  SRR4302540.1997860/1‑94 (MQ=60)
                                 GCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAA                                                              <  SRR4302540.1498495/94‑1 (MQ=60)
                                  CCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAG                                                             <  SRR4302540.4669455/94‑1 (MQ=60)
                                   CAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGA                                                            >  SRR4302540.812281/1‑94 (MQ=60)
                                   CAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGA                                                            >  SRR4302540.3952476/1‑94 (MQ=60)
                                   CAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTAGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGA                                                            >  SRR4302540.8890757/1‑94 (MQ=60)
                                    AGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAG                                                           >  SRR4302540.1574355/1‑94 (MQ=60)
                                    AGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGACACCAACAAAGAAGAG                                                           >  SRR4302540.2606512/1‑94 (MQ=60)
                                     GAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGC                                                          <  SRR4302540.4801984/94‑1 (MQ=60)
                                      AAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACCAAGAAGAGCG                                                         >  SRR4302540.2523928/1‑94 (MQ=60)
                                      AAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCG                                                         <  SRR4302540.8844897/94‑1 (MQ=60)
                                      AAGGTACCCAGAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCG                                                         <  SRR4302540.7906794/94‑1 (MQ=60)
                                        GGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCG                                                       >  SRR4302540.4977318/1‑94 (MQ=60)
                                        GGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCG                                                       >  SRR4302540.5653834/1‑94 (MQ=60)
                                        GGTACCCATAGTTTTGCCTACAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCG                                                       <  SRR4302540.1682710/94‑1 (MQ=60)
                                         GTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGG                                                      <  SRR4302540.5859520/94‑1 (MQ=60)
                                           ACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCA                                                    >  SRR4302540.3412330/1‑94 (MQ=60)
                                           ACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCA                                                    >  SRR4302540.12511/1‑94 (MQ=60)
                                           ACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCA                                                    <  SRR4302540.5733892/94‑1 (MQ=60)
                                           ACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCA                                                    >  SRR4302540.4288029/1‑94 (MQ=60)
                                           ACCAATAGTTATGCCTTCAAGAACGGAAACTTCAGTAGCGTGAGTTTTGGTGGGTTGTAGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCA                                                    <  SRR4302540.9038082/94‑1 (MQ=60)
                                            CCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAG                                                   <  SRR4302540.9351166/94‑1 (MQ=60)
                                            CCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAG                                                   <  SRR4302540.4917095/94‑1 (MQ=60)
                                            CCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAG                                                   >  SRR4302540.4471607/1‑94 (MQ=60)
                                             CCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGC                                                  >  SRR4302540.5793865/1‑94 (MQ=60)
                                             CCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGC                                                  <  SRR4302540.4935182/94‑1 (MQ=60)
                                             CCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGC                                                  >  SRR4302540.5793866/1‑94 (MQ=60)
                                              CATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCC                                                 >  SRR4302540.5112622/1‑94 (MQ=60)
                                               ATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCA                                                >  SRR4302540.2613941/1‑94 (MQ=60)
                                               ATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCA                                                >  SRR4302540.4093234/1‑94 (MQ=60)
                                               ATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCA                                                >  SRR4302540.4093235/1‑94 (MQ=60)
                                                TAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAG                                               >  SRR4302540.6758969/1‑94 (MQ=60)
                                                TAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAG                                               >  SRR4302540.8892216/1‑94 (MQ=60)
                                                TAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAG                                               <  SRR4302540.256779/94‑1 (MQ=60)
                                                 AGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGC                                              >  SRR4302540.5545181/1‑94 (MQ=60)
                                                  GTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCA                                             <  SRR4302540.5421031/94‑1 (MQ=60)
                                                   TTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAG                                            >  SRR4302540.9474040/1‑94 (MQ=60)
                                                   TTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCACCAG                                            >  SRR4302540.9474041/1‑94 (MQ=60)
                                                    TTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGT                                           >  SRR4302540.8364546/1‑94 (MQ=60)
                                                    TTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGT                                           >  SRR4302540.2646584/1‑94 (MQ=60)
                                                    TTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGT                                           <  SRR4302540.1729605/94‑1 (MQ=60)
                                                     TTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTG                                          >  SRR4302540.2485889/1‑94 (MQ=60)
                                                     TTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTG                                          >  SRR4302540.4312903/1‑94 (MQ=60)
                                                     TTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTG                                          <  SRR4302540.1512815/94‑1 (MQ=60)
                                                       GCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCC                                        >  SRR4302540.4245381/1‑94 (MQ=60)
                                                       GCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCC                                        >  SRR4302540.4245382/1‑94 (MQ=60)
                                                         CTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAC                                      <  SRR4302540.9944653/94‑1 (MQ=60)
                                                         CTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAC                                      <  SRR4302540.9944651/94‑1 (MQ=60)
                                                         CTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAC                                      <  SRR4302540.7557942/94‑1 (MQ=60)
                                                         CTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAC                                      >  SRR4302540.5818520/1‑94 (MQ=60)
                                                         CTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAC                                      >  SRR4302540.1382621/1‑94 (MQ=60)
                                                          TTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACG                                     <  SRR4302540.555439/94‑1 (MQ=60)
                                                            CAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCG                                   <  SRR4302540.7988450/94‑1 (MQ=60)
                                                            CAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCG                                   <  SRR4302540.8811559/94‑1 (MQ=60)
                                                            CAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCG                                   >  SRR4302540.9066688/1‑94 (MQ=60)
                                                            CAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCG                                   >  SRR4302540.1295435/1‑94 (MQ=60)
                                                            CAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCG                                   >  SRR4302540.1295434/1‑94 (MQ=60)
                                                             AAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGG                                  >  SRR4302540.3334761/1‑94 (MQ=60)
                                                             AAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGG                                  >  SRR4302540.7092215/1‑94 (MQ=60)
                                                             AAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGG                                  <  SRR4302540.4120128/94‑1 (MQ=60)
                                                              AGAACAGTAACTTCAGTAGCGTGGGTGTTGGTGGGTTGTGGTTTTTGATCGCAGACAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGG                                 <  SRR4302540.9465927/94‑1 (MQ=60)
                                                                AACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTA                               >  SRR4302540.7980045/1‑94 (MQ=60)
                                                                AACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTA                               >  SRR4302540.5002180/1‑94 (MQ=60)
                                                                  CGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAA                             <  SRR4302540.4107489/94‑1 (MQ=60)
                                                                   GGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAG                            <  SRR4302540.6469704/94‑1 (MQ=60)
                                                                   GGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAG                            <  SRR4302540.4433519/94‑1 (MQ=60)
                                                                   GGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAG                            >  SRR4302540.3778818/1‑94 (MQ=60)
                                                                   GGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAG                            >  SRR4302540.4286296/1‑94 (MQ=60)
                                                                   GGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAG                            <  SRR4302540.5222756/94‑1 (MQ=60)
                                                                      AACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGACGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTT                         >  SRR4302540.2511718/1‑94 (MQ=60)
                                                                      AACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGTGTAAAGCTT                         >  SRR4302540.1190981/1‑94 (MQ=60)
                                                                      AACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTT                         >  SRR4302540.1229811/1‑94 (MQ=60)
                                                                       ACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACTAACAAAGAAGAGCGCGGCAGCCCGCAGTGCCACGCGGGGAAAGCTTA                        >  SRR4302540.7558301/1‑94 (MQ=60)
                                                                       ACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTCAAGCTTA                        >  SRR4302540.6705957/1‑94 (MQ=60)
                                                                       ACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTA                        >  SRR4302540.4002599/1‑94 (MQ=60)
                                                                       ACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTA                        >  SRR4302540.7558300/1‑94 (MQ=60)
                                                                       ACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAATGTCACGCGGGTACAGCTTT                        >  SRR4302540.6705956/1‑94 (MQ=60)
                                                                        CTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAT                       <  SRR4302540.6584852/94‑1 (MQ=60)
                                                                        CTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAT                       <  SRR4302540.1808399/94‑1 (MQ=60)
                                                                        CTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAT                       >  SRR4302540.6427677/1‑94 (MQ=60)
                                                                        CTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAT                       >  SRR4302540.6427678/1‑94 (MQ=60)
                                                                         TTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATT                      >  SRR4302540.2280522/1‑94 (MQ=60)
                                                                         TTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATT                      >  SRR4302540.4459843/1‑94 (MQ=60)
                                                                         TTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATT                      >  SRR4302540.9315938/1‑94 (MQ=60)
                                                                         TTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATT                      <  SRR4302540.9448076/94‑1 (MQ=60)
                                                                          TCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTT                     <  SRR4302540.1231034/94‑1 (MQ=60)
                                                                           CAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTC                    >  SRR4302540.5895449/1‑94 (MQ=60)
                                                                             GTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCA                  >  SRR4302540.726224/1‑94 (MQ=60)
                                                                              TAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT                 <  SRR4302540.7965881/94‑1 (MQ=60)
                                                                              TAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT                 >  SRR4302540.778169/1‑94 (MQ=60)
                                                                              TAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT                 >  SRR4302540.1888549/1‑94 (MQ=60)
                                                                              TAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT                 <  SRR4302540.738306/94‑1 (MQ=60)
                                                                              TAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT                 <  SRR4302540.5191577/94‑1 (MQ=60)
                                                                              TAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT                 <  SRR4302540.1690001/94‑1 (MQ=60)
                                                                              TAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT                 <  SRR4302540.6788638/94‑1 (MQ=60)
                                                                              TAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT                 <  SRR4302540.6788639/94‑1 (MQ=60)
                                                                               AGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATA                >  SRR4302540.18083/1‑94 (MQ=60)
                                                                                GCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATAC               >  SRR4302540.9264904/1‑94 (MQ=60)
                                                                                GCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATAC               <  SRR4302540.5269664/94‑1 (MQ=60)
                                                                                GCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATAC               <  SRR4302540.813112/94‑1 (MQ=60)
                                                                                 CGTGTGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACG              <  SRR4302540.2781202/94‑1 (MQ=60)
                                                                                 CGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACG              >  SRR4302540.5167241/1‑94 (MQ=60)
                                                                                 CGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACG              <  SRR4302540.7365972/94‑1 (MQ=60)
                                                                                  GTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGT             >  SRR4302540.9182056/1‑94 (MQ=60)
                                                                                  GTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGT             >  SRR4302540.880863/1‑94 (MQ=60)
                                                                                  GTGGGTTTTGGTGGGTTGTGGGTTTTGATCGCAACCAACAAAaagaagcgggcaggccacaaatccccgccggctaaggctacttccatacctg             >  SRR4302540.8831094/1‑42 (MQ=60)
                                                                                   TGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTG            >  SRR4302540.8063567/1‑94 (MQ=60)
                                                                                   TGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTG            <  SRR4302540.4401995/94‑1 (MQ=60)
                                                                                    GGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGA           >  SRR4302540.6128940/1‑94 (MQ=60)
                                                                                      GTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATT         >  SRR4302540.8354685/1‑94 (MQ=60)
                                                                                        TTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTAT       <  SRR4302540.4739605/94‑1 (MQ=60)
                                                                                        TTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTAT       <  SRR4302540.3628/94‑1 (MQ=60)
                                                                                         TTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATC      >  SRR4302540.1678917/1‑94 (MQ=60)
                                                                                         TTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATC      <  SRR4302540.4883119/94‑1 (MQ=60)
                                                                                         TTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATC      <  SRR4302540.3497725/94‑1 (MQ=60)
                                                                                           GGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCT    <  SRR4302540.4986607/94‑1 (MQ=60)
                                                                                            GTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTC   >  SRR4302540.5076646/1‑94 (MQ=60)
                                                                                            GTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTC   <  SRR4302540.7013604/94‑1 (MQ=60)
                                                                                            GTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTC   <  SRR4302540.1173976/94‑1 (MQ=60)
                                                                                            GTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGCGTAAAGCTTATTTCCATACGTGATTATCCTC   >  SRR4302540.5076645/1‑94 (MQ=60)
                                                                                             GGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTCA  <  SRR4302540.2951098/94‑1 (MQ=60)
                                                                                             GGGGTAGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTCA  <  SRR4302540.2951099/94‑1 (MQ=60)
                                                                                             |                                                                                             
TGCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTCA  >  NC_000913/2309383‑2309569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: