Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,309,476 |
C→T |
A27T (GCC→ACC) |
yojL ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,309,476 | 0 | C | T | 100.0%
| 706.0
/ NA
| 192 | A27T (GCC→ACC) | yojL | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (91/101); total (91/101) |
Only 100 of 197 total aligned reads displayed.
GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATC > NC_000913/2309386‑2309565
|
gTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGGTTtggtgg > 2:3506670/1‑93 (MQ=255)
tGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGtt > 1:5780280/1‑93 (MQ=255)
tGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGtt > 2:4611906/1‑93 (MQ=255)
tGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGtt < 1:2901416/93‑1 (MQ=255)
gCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTtgt < 2:489321/93‑1 (MQ=255)
gTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTgg > 2:979465/1‑93 (MQ=255)
gTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTgg < 1:4967896/93‑1 (MQ=255)
tCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGt > 2:201471/1‑93 (MQ=255)
gCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTg > 1:4053024/1‑93 (MQ=255)
gCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTg < 1:3504193/93‑1 (MQ=255)
cccGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGa > 2:6038181/1‑93 (MQ=255)
cccGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGa < 1:4467353/93‑1 (MQ=255)
ccGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGAt > 1:760441/1‑93 (MQ=255)
ggATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGc < 2:2506749/93‑1 (MQ=255)
aTGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaa < 1:637633/93‑1 (MQ=255)
tGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaac < 1:220696/93‑1 (MQ=255)
tGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaac > 1:5241084/1‑93 (MQ=255)
tGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaac < 1:4642312/93‑1 (MQ=255)
tGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaac > 1:1771907/1‑93 (MQ=255)
tGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaac < 1:1686584/93‑1 (MQ=255)
gCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaacc > 2:2601472/1‑93 (MQ=255)
gCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaacc > 1:4891290/1‑93 (MQ=255)
cTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaacca < 2:1223758/93‑1 (MQ=255)
tGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaaccaa > 2:1525702/1‑93 (MQ=255)
ggCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaaccaac > 1:5408569/1‑93 (MQ=255)
gCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACcaaca < 2:1002400/93‑1 (MQ=255)
aCGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACaaa < 2:1609663/93‑1 (MQ=255)
cGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaag < 1:1441736/93‑1 (MQ=255)
gCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaaga > 1:5928052/1‑93 (MQ=255)
gCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaaga < 1:2825722/93‑1 (MQ=255)
cAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaag > 1:3238634/1‑93 (MQ=255)
cAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaag > 2:5160279/1‑93 (MQ=255)
cAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaag > 2:6118215/1‑93 (MQ=255)
aGAAGGTACCCATAGTTTTGCCTTCAAGAGCGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAagaaga < 2:2296011/93‑1 (MQ=255)
aGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAagaaga < 2:4961327/93‑1 (MQ=255)
aGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAagaaga > 1:2237203/1‑93 (MQ=255)
gAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAagag > 1:1499057/1‑93 (MQ=255)
aaGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgc < 1:5631064/93‑1 (MQ=255)
aaGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgc > 1:249464/1‑93 (MQ=255)
aaGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgc > 1:3041209/1‑93 (MQ=255)
aGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgcg < 1:3625341/93‑1 (MQ=255)
ggTACCCATAGTTTTGCCTTCAAGAACGGTACGTTGAGTAGCGTGAGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCACCAAAGAAGAgcgc < 2:3879989/93‑1 (MQ=255)
ggTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgcgc > 2:5655235/1‑93 (MQ=255)
ggTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgcgc < 1:857670/93‑1 (MQ=255)
ggTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgcgc < 1:5123158/93‑1 (MQ=255)
gTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGcgcg < 2:3475238/93‑1 (MQ=255)
gTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGcgcg < 2:639053/93‑1 (MQ=255)
tACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCgg > 2:5210940/1‑93 (MQ=255)
cccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGca > 1:810159/1‑93 (MQ=255)
cccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGca < 1:50323/93‑1 (MQ=255)
aTAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagcc > 2:5519328/1‑93 (MQ=255)
tAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagcca < 1:4193384/93‑1 (MQ=255)
tAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagcca > 1:2753214/1‑93 (MQ=255)
gTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagccagc < 2:4336589/93‑1 (MQ=255)
gTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagccagc > 1:5186526/1‑93 (MQ=255)
ttttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagca < 2:3712805/93‑1 (MQ=255)
ttttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagca > 2:3913581/1‑93 (MQ=255)
tttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGCTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagcag < 1:3375341/93‑1 (MQ=255)
cTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCa > 1:1888188/1‑93 (MQ=255)
cTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCa < 1:3412903/93‑1 (MQ=255)
ttCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACTAAGAAGAGCGCGGCAGCCAGCAGTGCCAc > 2:6188752/1‑93 (MQ=255)
ttCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAc < 2:1781318/93‑1 (MQ=255)
tCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcg < 1:2316896/93‑1 (MQ=255)
tCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcg < 2:5049680/93‑1 (MQ=255)
tCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcg > 2:1447514/1‑93 (MQ=255)
tCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcg > 2:1377688/1‑93 (MQ=255)
cAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcgc < 1:3311756/93‑1 (MQ=255)
cAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcgc < 2:2482394/93‑1 (MQ=255)
aaGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcgcg > 2:4062701/1‑93 (MQ=255)
aaGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcgcg < 2:544551/93‑1 (MQ=255)
aGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCgg > 2:3182693/1‑93 (MQ=255)
aGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCgg > 1:2407150/1‑93 (MQ=255)
aGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCgg < 2:4493072/93‑1 (MQ=255)
gAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCggg < 1:4208545/93‑1 (MQ=255)
cGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTaa < 2:365554/93‑1 (MQ=255)
ggTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTaaa > 1:4683914/1‑93 (MQ=255)
gTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAg > 2:3400002/1‑93 (MQ=255)
tAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGc < 2:2998782/93‑1 (MQ=255)
aaCTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCt < 1:537168/93‑1 (MQ=255)
aCTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCtt > 2:4715802/1‑93 (MQ=255)
aCTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCtt > 2:2607464/1‑93 (MQ=255)
cTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTa < 1:1853547/93‑1 (MQ=255)
tCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAtt < 1:2553214/93‑1 (MQ=255)
tCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAtt < 1:71358/93‑1 (MQ=255)
aGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTc > 2:3151110/1‑93 (MQ=255)
gTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTcc < 1:5867397/93‑1 (MQ=255)
tAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCa < 1:3175752/93‑1 (MQ=255)
tAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCa < 1:4383438/93‑1 (MQ=255)
gCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATa < 2:255290/93‑1 (MQ=255)
gTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTGAAGCTTATTTTCATACg > 1:5460100/1‑93 (MQ=255)
gTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACg > 2:5955055/1‑93 (MQ=255)
gTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACg > 1:109260/1‑93 (MQ=255)
tGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGt < 1:3752984/93‑1 (MQ=255)
gTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGGAAAGCTTATTTCCATACGTGAt > 1:111396/1‑93 (MQ=255)
ttttGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGAtt < 2:2938736/93‑1 (MQ=255)
ttttGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGAtt > 2:6009880/1‑93 (MQ=255)
tttGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTa < 2:203258/93‑1 (MQ=255)
tttGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTa < 1:891614/93‑1 (MQ=255)
ttGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTAt < 2:3671053/93‑1 (MQ=255)
tggtggGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATc < 2:1949737/93‑1 (MQ=255)
|
GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATC > NC_000913/2309386‑2309565
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCC > NC_000913/2309383‑2309566
|
TGCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGT > SRR4302533.3499912/1‑94 (MQ=60)
GCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTG > SRR4302533.2779871/1‑94 (MQ=60)
CGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGG < SRR4302533.3973504/94‑1 (MQ=60)
CGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGG < SRR4302533.2133032/94‑1 (MQ=60)
TTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTT > SRR4302533.5815191/1‑94 (MQ=60)
TGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTG < SRR4302533.2919241/94‑1 (MQ=60)
TGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTG > SRR4302533.5438183/1‑94 (MQ=60)
TGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTG < SRR4302533.5221886/94‑1 (MQ=60)
GCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTG < SRR4302533.3380562/94‑1 (MQ=60)
GCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTG < SRR4302533.1882895/94‑1 (MQ=60)
CGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGG < SRR4302533.1851439/94‑1 (MQ=60)
GTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGT < SRR4302533.4998017/94‑1 (MQ=60)
TGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTG > SRR4302533.4077705/1‑94 (MQ=60)
GCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGA < SRR4302533.3525794/94‑1 (MQ=60)
CCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGAT < SRR4302533.4494371/94‑1 (MQ=60)
CCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGAT > SRR4302533.764914/1‑94 (MQ=60)
CCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATC > SRR4302533.2328073/1‑94 (MQ=60)
CGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCG > SRR4302533.4601151/1‑94 (MQ=60)
CGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCG > SRR4302533.5177624/1‑94 (MQ=60)
GGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGC > SRR4302533.5584616/1‑94 (MQ=60)
ATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAAC > SRR4302533.1782695/1‑94 (MQ=60)
ATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAAC > SRR4302533.5272590/1‑94 (MQ=60)
ATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAAC > SRR4302533.3012976/1‑94 (MQ=60)
ATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAAC < SRR4302533.641384/94‑1 (MQ=60)
TGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACC < SRR4302533.222081/94‑1 (MQ=60)
TGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACC > SRR4302533.4920925/1‑94 (MQ=60)
TGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACC < SRR4302533.4670439/94‑1 (MQ=60)
TGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACC < SRR4302533.1696800/94‑1 (MQ=60)
TGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAAC > SRR4302533.975182/1‑94 (MQ=60)
TGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAAC > SRR4302533.5441079/1‑94 (MQ=60)
GCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAA < SRR4302533.5287892/94‑1 (MQ=60)
CACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAA > SRR4302533.731451/1‑94 (MQ=60)
CGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGA < SRR4302533.1450436/94‑1 (MQ=60)
CGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGA > SRR4302533.5963886/1‑94 (MQ=60)
GCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAA < SRR4302533.2843110/94‑1 (MQ=60)
CCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAG > SRR4302533.3258594/1‑94 (MQ=60)
CCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAA > SRR4302533.1550273/1‑94 (MQ=60)
CAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGA > SRR4302533.2251031/1‑94 (MQ=60)
CAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGA > SRR4302533.5478368/1‑94 (MQ=60)
AGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAG > SRR4302533.1508091/1‑94 (MQ=60)
GAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGC > SRR4302533.251005/1‑94 (MQ=60)
GAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGC > SRR4302533.3059823/1‑94 (MQ=60)
GAAGGTACCCATAGTTTGGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGC < SRR4302533.5931220/94‑1 (MQ=60)
AAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCG < SRR4302533.6230179/94‑1 (MQ=60)
AAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCG < SRR4302533.5665117/94‑1 (MQ=60)
AGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGC < SRR4302533.3647647/94‑1 (MQ=60)
GGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCG < SRR4302533.2174855/94‑1 (MQ=60)
GGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCG < SRR4302533.862692/94‑1 (MQ=60)
GGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCG < SRR4302533.5154111/94‑1 (MQ=60)
GGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCG < SRR4302533.2881294/94‑1 (MQ=60)
GTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGG < SRR4302533.3425953/94‑1 (MQ=60)
GTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGG > SRR4302533.4998952/1‑94 (MQ=60)
ACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCA < SRR4302533.5714360/94‑1 (MQ=60)
ACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCA > SRR4302533.814913/1‑94 (MQ=60)
CCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAG < SRR4302533.50668/94‑1 (MQ=60)
CCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGC > SRR4302533.5153443/1‑94 (MQ=60)
ATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCA > SRR4302533.2770097/1‑94 (MQ=60)
ATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCA < SRR4302533.3679402/94‑1 (MQ=60)
TAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAG > SRR4302533.4197465/1‑94 (MQ=60)
TAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAG < SRR4302533.4218763/94‑1 (MQ=60)
AGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGC > SRR4302533.5217833/1‑94 (MQ=60)
GTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCA > SRR4302533.4034359/1‑94 (MQ=60)
TTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAG > SRR4302533.682639/1‑94 (MQ=60)
TTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGCTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGT < SRR4302533.3396187/94‑1 (MQ=60)
CCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCA > SRR4302533.1899722/1‑94 (MQ=60)
CCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCA < SRR4302533.4713387/94‑1 (MQ=60)
CTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAC < SRR4302533.3433986/94‑1 (MQ=60)
CTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAC < SRR4302533.1474460/94‑1 (MQ=60)
TTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACG < SRR4302533.2234986/94‑1 (MQ=60)
TTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACG < SRR4302533.32053/94‑1 (MQ=60)
TCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGC < SRR4302533.2331239/94‑1 (MQ=60)
TCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGC > SRR4302533.867932/1‑94 (MQ=60)
CAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCG < SRR4302533.3332208/94‑1 (MQ=60)
AAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGG > SRR4302533.2422019/1‑94 (MQ=60)
GAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGT < SRR4302533.4706550/94‑1 (MQ=60)
GAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGT < SRR4302533.4487103/94‑1 (MQ=60)
GAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGT < SRR4302533.4234006/94‑1 (MQ=60)
AACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCGGCCAGCAGTGCCACGCGGGTA > SRR4302533.3588299/1‑94 (MQ=60)
AACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTA < SRR4302533.274573/94‑1 (MQ=60)
CGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAA > SRR4302533.4712291/1‑94 (MQ=60)
CGGTAACTTCAGTAGCGTGGCTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAA < SRR4302533.4231271/94‑1 (MQ=60)
GTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGC < SRR4302533.1217292/94‑1 (MQ=60)
AACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTT < SRR4302533.540363/94‑1 (MQ=60)
AACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTT < SRR4302533.5866950/94‑1 (MQ=60)
CTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAT < SRR4302533.1864847/94‑1 (MQ=60)
TCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTT < SRR4302533.71817/94‑1 (MQ=60)
TCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTT < SRR4302533.2568925/94‑1 (MQ=60)
TCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTT < SRR4302533.4311360/94‑1 (MQ=60)
GTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCA < SRR4302533.5902861/94‑1 (MQ=60)
TAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT < SRR4302533.3195288/94‑1 (MQ=60)
TAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT < SRR4302533.4409901/94‑1 (MQ=60)
AGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATA < SRR4302533.2505895/94‑1 (MQ=60)
AGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATA > SRR4302533.1767021/1‑94 (MQ=60)
CGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTGAAGCTTATTTTCATACG > SRR4302533.5492995/1‑94 (MQ=60)
CGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACG > SRR4302533.109955/1‑94 (MQ=60)
CGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACG < SRR4302533.2404283/94‑1 (MQ=60)
TGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTG < SRR4302533.3103669/94‑1 (MQ=60)
TGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTG < SRR4302533.3775989/94‑1 (MQ=60)
GGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGGAAAGCTTATTTCCATACGTGAT > SRR4302533.112100/1‑94 (MQ=60)
GTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATT < SRR4302533.3489887/94‑1 (MQ=60)
GTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATT > SRR4302533.769166/1‑94 (MQ=60)
TTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTA > SRR4302533.2525882/1‑94 (MQ=60)
TTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTA < SRR4302533.861157/94‑1 (MQ=60)
TTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTAT < SRR4302533.896854/94‑1 (MQ=60)
TTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTAT < SRR4302533.2822044/94‑1 (MQ=60)
TGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCC < SRR4302533.333081/94‑1 (MQ=60)
|
TGCGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCC > NC_000913/2309383‑2309566
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
