Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,317,837 T→C A4A (GCA→GCG)  rcsC ← RcsC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,317,8370TC100.0% 1294.8 / NA 398A4A (GCA→GCG) rcsCRcsC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (179/219);  total (179/219)

Only 100 of 408 total aligned reads displayed.

CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT  >  NC_000913/2317747‑2317926
                                                                                          |                                                                                         
 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  2:4201699/1‑93 (MQ=255)
 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGACAACGct                                                                                        >  2:9532657/1‑93 (MQ=255)
  gACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctc                                                                                       >  1:3864895/1‑93 (MQ=255)
  gACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctc                                                                                       >  1:185709/1‑93 (MQ=255)
    cGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTg                                                                                     >  1:7807770/1‑93 (MQ=255)
     gattttCCGATTCTCGCCGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACGAACTCCAACGTTCTGa                                                                                    >  2:8989533/4‑93 (MQ=255)
      aaTTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGaa                                                                                   <  2:6689327/93‑1 (MQ=255)
      aaTTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGaa                                                                                   >  1:7386178/1‑93 (MQ=255)
        tttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACa                                                                                 <  1:4991826/93‑1 (MQ=255)
        tttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACa                                                                                 <  1:3775375/93‑1 (MQ=255)
           ccGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGt                                                                              >  2:1604383/1‑93 (MQ=255)
           ccGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGt                                                                              >  2:9184189/1‑93 (MQ=255)
            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTa                                                                             >  2:4862947/1‑93 (MQ=255)
            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTa                                                                             <  1:6373137/93‑1 (MQ=255)
             gATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAg                                                                            <  2:4410351/93‑1 (MQ=255)
              aTTCTCGCTTATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgc                                                                           <  1:5293010/93‑1 (MQ=255)
              aTTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgc                                                                           >  2:2883432/1‑93 (MQ=255)
               ttCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAACCAACAGCCAGAGCACTAACGCCAACCCTCTAAACATGTAccg                                                                          >  2:5692279/1‑93 (MQ=255)
                  tcGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGa                                                                       >  1:6803864/1‑93 (MQ=255)
                    gCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCCCTACCGCCAACGCTCTGAACATGTAGCGCGAgg                                                                     <  2:5406605/93‑1 (MQ=255)
                    gCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAgg                                                                     >  1:6554825/1‑93 (MQ=255)
                     cTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGc                                                                    >  1:3120586/1‑93 (MQ=255)
                       gATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCtt                                                                  >  2:8128373/1‑93 (MQ=255)
                       gATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCtt                                                                  <  2:6877787/93‑1 (MQ=255)
                       gATGTAACGCATGAACGATGTAAAAAGCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCtt                                                                  <  1:9319161/93‑1 (MQ=255)
                         tGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTc                                                                <  1:4804836/93‑1 (MQ=255)
                         tGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTc                                                                <  1:2831156/93‑1 (MQ=255)
                         tGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTc                                                                <  1:6089330/93‑1 (MQ=255)
                         tGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTc                                                                <  1:1028636/93‑1 (MQ=255)
                          gTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCa                                                               >  1:8225661/1‑93 (MQ=255)
                           tAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAg                                                              <  1:4052900/93‑1 (MQ=255)
                           tAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAg                                                              <  1:6872989/93‑1 (MQ=255)
                           tAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAg                                                              <  1:6695401/93‑1 (MQ=255)
                            aaCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAgg                                                             >  1:9214959/1‑93 (MQ=255)
                            aaCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAgg                                                             >  2:6390062/1‑93 (MQ=255)
                              cGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGt                                                           <  1:7078541/93‑1 (MQ=255)
                              cGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGt                                                           <  1:5823272/93‑1 (MQ=255)
                               gCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGtt                                                          <  1:1532359/93‑1 (MQ=255)
                                 aTTAACGATGTAAATAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGt                                                        <  1:5462886/93‑1 (MQ=255)
                                 aTTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGt                                                        >  2:7819305/1‑93 (MQ=255)
                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      <  2:5628890/93‑1 (MQ=255)
                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      >  1:3483012/1‑93 (MQ=255)
                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTATGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      >  1:9676145/1‑93 (MQ=255)
                                    aaCGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACg                                                     >  1:9895303/1‑93 (MQ=255)
                                     aCGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGa                                                    >  1:2186100/1‑93 (MQ=255)
                                     aCGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGa                                                    >  1:7855491/1‑93 (MQ=255)
                                      cGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaa                                                   <  2:7439322/93‑1 (MQ=255)
                                      cGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaa                                                   >  2:8795647/1‑93 (MQ=255)
                                       gATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaaa                                                  >  2:3888814/1‑93 (MQ=255)
                                          gTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaaga                                               <  1:4623134/93‑1 (MQ=255)
                                           tAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              <  1:4229111/93‑1 (MQ=255)
                                           tAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              >  2:5926734/1‑93 (MQ=255)
                                           gaaaaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              <  1:1651327/92‑1 (MQ=255)
                                             aaaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGc                                            >  1:8523210/1‑93 (MQ=255)
                                             aaaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGc                                            <  2:7597177/93‑1 (MQ=255)
                                              aaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCa                                           >  2:7324803/1‑93 (MQ=255)
                                                aaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAg                                         >  1:1769546/1‑93 (MQ=255)
                                                 aCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAGCGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAgg                                        <  2:9696916/93‑1 (MQ=255)
                                                  cGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGt                                       <  1:246677/93‑1 (MQ=255)
                                                   ggATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTa                                      >  1:9516356/1‑93 (MQ=255)
                                                   ggATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTa                                      >  1:8012476/1‑93 (MQ=255)
                                                    gATGAAAAAGGAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAt                                     <  1:7199357/93‑1 (MQ=255)
                                                    gATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAt                                     >  1:2671333/1‑93 (MQ=255)
                                                    gATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAt                                     <  2:468994/93‑1 (MQ=255)
                                                    gATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAt                                     <  2:1248114/93‑1 (MQ=255)
                                                      tGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAttt                                   <  2:3195261/93‑1 (MQ=255)
                                                       gAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTc                                  <  1:3450549/93‑1 (MQ=255)
                                                       gAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTc                                  <  1:9015777/93‑1 (MQ=255)
                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  2:3701777/93‑1 (MQ=255)
                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  2:864779/93‑1 (MQ=255)
                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  2:5220805/1‑93 (MQ=255)
                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  2:8616791/93‑1 (MQ=255)
                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTCCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  1:5598335/1‑93 (MQ=255)
                                                           aaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAg                              <  2:8869725/93‑1 (MQ=255)
                                                           aaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAg                              <  2:5803952/93‑1 (MQ=255)
                                                            aGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgg                             >  1:6040068/1‑93 (MQ=255)
                                                             gCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAggg                            >  1:6229498/1‑93 (MQ=255)
                                                             gCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAggg                            <  2:1157651/93‑1 (MQ=255)
                                                              caaccaacAGCCAGAGCACTAACGCCAACGCTCGGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgggg                           <  1:7667415/93‑1 (MQ=255)
                                                              cAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgggg                           <  1:9388339/93‑1 (MQ=255)
                                                               aaTCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGc                          >  1:1226352/1‑93 (MQ=255)
                                                                 tCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGa                        <  2:2740919/93‑1 (MQ=255)
                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       <  2:1816141/93‑1 (MQ=255)
                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       <  2:9130863/93‑1 (MQ=255)
                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       >  1:7587633/1‑93 (MQ=255)
                                                                   aaCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAg                      <  1:2997884/93‑1 (MQ=255)
                                                                      aGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTc                   <  2:8432095/93‑1 (MQ=255)
                                                                       gCCAGAGCACTAACGCCAGCGCTCTGAGCATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTcc                  <  2:304833/93‑1 (MQ=255)
                                                                            agCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTc             <  2:9857239/93‑1 (MQ=255)
                                                                             gCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCa            <  1:3589838/93‑1 (MQ=255)
                                                                             gCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGCTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTcg            >  2:4010342/1‑92 (MQ=255)
                                                                               aCTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAgg          <  1:8712042/93‑1 (MQ=255)
                                                                               aCTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAgg          <  2:6148446/93‑1 (MQ=255)
                                                                                  aaCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGa       <  1:8354423/93‑1 (MQ=255)
                                                                                  aaCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGa       <  2:1529854/93‑1 (MQ=255)
                                                                                  aaCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGa       >  1:198488/1‑93 (MQ=255)
                                                                                  aaCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGCGa       >  2:2475575/1‑93 (MQ=255)
                                                                                   aCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGAc      <  1:8884420/93‑1 (MQ=255)
                                                                                   aCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGAc      <  1:4708669/93‑1 (MQ=255)
                                                                                       cAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAt  <  2:3536175/93‑1 (MQ=255)
                                                                                          |                                                                                         
CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT  >  NC_000913/2317747‑2317926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 244 total aligned reads displayed.
TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGAG  >  NC_000913/2317744‑2317930
                                                                                             |                                                                                             
TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAAC                                                                                               <  SRR4302540.3140655/94‑1 (MQ=60)
TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAAC                                                                                               <  SRR4302540.5550991/94‑1 (MQ=60)
TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAAC                                                                                               <  SRR4302540.896408/94‑1 (MQ=60)
TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAAC                                                                                               >  SRR4302540.6295727/1‑94 (MQ=60)
TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAAC                                                                                               <  SRR4302540.4545901/94‑1 (MQ=60)
TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAAC                                                                                               <  SRR4302540.1618855/94‑1 (MQ=60)
TTCCTGACGAATTTCAGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAAC                                                                                               <  SRR4302540.8719689/94‑1 (MQ=60)
 TCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACG                                                                                              <  SRR4302540.3332000/94‑1 (MQ=60)
  CCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGC                                                                                             >  SRR4302540.4989348/1‑94 (MQ=60)
   CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACTGATGAAAAAGCAATCAAAAGCCAGAGCACTAACGCCAACGCT                                                                                            >  SRR4302540.8018106/1‑94 (MQ=60)
   CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCT                                                                                            <  SRR4302540.8482139/94‑1 (MQ=60)
    TGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTC                                                                                           >  SRR4302540.187554/1‑94 (MQ=60)
    TGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTC                                                                                           <  SRR4302540.667100/94‑1 (MQ=60)
      ACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTG                                                                                         >  SRR4302540.7899008/1‑94 (MQ=60)
      ACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTG                                                                                         <  SRR4302540.5087167/94‑1 (MQ=60)
        GAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAA                                                                                       <  SRR4302540.177386/94‑1 (MQ=60)
        GAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAA                                                                                       >  SRR4302540.6720093/1‑94 (MQ=60)
         gattaCCGATCCTCGCTGAAGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAAC                                                                                      <  SRR4302540.7309831/89‑1 (MQ=60)
         AATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAAC                                                                                      >  SRR4302540.3642984/1‑94 (MQ=60)
         AATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAAC                                                                                      <  SRR4302540.6122314/94‑1 (MQ=60)
          ATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACA                                                                                     >  SRR4302540.9910492/1‑94 (MQ=60)
           TTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAT                                                                                    <  SRR4302540.3884877/94‑1 (MQ=60)
           TTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAT                                                                                    <  SRR4302540.6015663/94‑1 (MQ=60)
           TTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAT                                                                                    <  SRR4302540.3816564/94‑1 (MQ=60)
           TTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAT                                                                                    >  SRR4302540.3595716/1‑94 (MQ=60)
           TTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAT                                                                                    <  SRR4302540.5045873/94‑1 (MQ=60)
            TTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATG                                                                                   <  SRR4302540.9450907/94‑1 (MQ=60)
             TCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGT                                                                                  <  SRR4302540.2999094/94‑1 (MQ=60)
              CCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTA                                                                                 <  SRR4302540.6787290/94‑1 (MQ=60)
               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                <  SRR4302540.6444097/94‑1 (MQ=60)
               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                <  SRR4302540.6444095/94‑1 (MQ=60)
               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                >  SRR4302540.4493211/1‑94 (MQ=60)
               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                >  SRR4302540.5423346/1‑94 (MQ=60)
               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                <  SRR4302540.9439635/94‑1 (MQ=60)
                GATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGC                                                                               <  SRR4302540.4369539/94‑1 (MQ=60)
                GATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGC                                                                               <  SRR4302540.2350189/94‑1 (MQ=60)
                GATTCTCGCTGATGTAACGCATTAACGATGAAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGC                                                                               <  SRR4302540.8016876/94‑1 (MQ=60)
                 ATTCTCGCTTATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              <  SRR4302540.5350885/94‑1 (MQ=60)
                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              >  SRR4302540.3858566/1‑94 (MQ=60)
                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              <  SRR4302540.1568471/94‑1 (MQ=60)
                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              >  SRR4302540.7733242/1‑94 (MQ=60)
                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              >  SRR4302540.1995126/1‑94 (MQ=60)
                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              >  SRR4302540.2084478/1‑94 (MQ=60)
                 ATTCTCGCTGATGTAACGAATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              >  SRR4302540.9125244/1‑94 (MQ=60)
                    CTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGA                                                                           >  SRR4302540.6879144/1‑94 (MQ=60)
                     TCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAG                                                                          <  SRR4302540.6939490/94‑1 (MQ=60)
                     TCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAG                                                                          <  SRR4302540.3582253/94‑1 (MQ=60)
                      CGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGG                                                                         >  SRR4302540.6627516/1‑94 (MQ=60)
                       GCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGC                                                                        >  SRR4302540.3154690/1‑94 (MQ=60)
                       GCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGC                                                                        >  SRR4302540.15580/1‑94 (MQ=60)
                        CCGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCT                                                                       <  SRR4302540.7025306/94‑1 (MQ=60)
                         TGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAATGCCAACGCTCTGAACATGTAGCGCGAGGCTT                                                                      >  SRR4302540.9326436/1‑94 (MQ=60)
                         TGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTT                                                                      >  SRR4302540.4060064/1‑94 (MQ=60)
                         TGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTT                                                                      >  SRR4302540.5456965/1‑94 (MQ=60)
                          GATGTAACGCATGAACGATGTAAAAAGCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTT                                                                     <  SRR4302540.9430360/94‑1 (MQ=60)
                           ATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTC                                                                    <  SRR4302540.6470413/94‑1 (MQ=60)
                           ATGTAACGCATGAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTC                                                                    <  SRR4302540.5148627/94‑1 (MQ=60)
                            TGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCA                                                                   <  SRR4302540.6157098/94‑1 (MQ=60)
                            TGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCA                                                                   >  SRR4302540.8321283/1‑94 (MQ=60)
                            TGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCA                                                                   <  SRR4302540.4856260/94‑1 (MQ=60)
                            TGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCA                                                                   <  SRR4302540.1039070/94‑1 (MQ=60)
                            TGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCA                                                                   <  SRR4302540.2861777/94‑1 (MQ=60)
                             GTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAG                                                                  <  SRR4302540.6736631/94‑1 (MQ=60)
                              TAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGG                                                                 <  SRR4302540.6949165/94‑1 (MQ=60)
                              TAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGG                                                                 <  SRR4302540.6023887/94‑1 (MQ=60)
                              TAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGG                                                                 >  SRR4302540.9325511/1‑94 (MQ=60)
                              TAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGG                                                                 >  SRR4302540.887863/1‑94 (MQ=60)
                              TAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGG                                                                 <  SRR4302540.4096596/94‑1 (MQ=60)
                               AACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGG                                                                >  SRR4302540.8876065/1‑94 (MQ=60)
                               AACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGG                                                                <  SRR4302540.7907865/94‑1 (MQ=60)
                               AACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGG                                                                <  SRR4302540.7907863/94‑1 (MQ=60)
                               AACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGG                                                                >  SRR4302540.3036888/1‑94 (MQ=60)
                               AACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGG                                                                <  SRR4302540.7607197/94‑1 (MQ=60)
                                 CGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTT                                                              <  SRR4302540.5887644/94‑1 (MQ=60)
                                 CGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTT                                                              <  SRR4302540.7157319/94‑1 (MQ=60)
                                 CGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGCT                                                              >  SRR4302540.3022042/1‑94 (MQ=60)
                                  GCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTG                                                             <  SRR4302540.1549326/94‑1 (MQ=60)
                                   CATTAACGATGTAAAAAACGGATGAAAAAGCAATCAGCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGT                                                            >  SRR4302540.1819387/1‑94 (MQ=60)
                                   CATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGT                                                            <  SRR4302540.9535467/94‑1 (MQ=60)
                                   CATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGT                                                            >  SRR4302540.8216816/1‑94 (MQ=60)
                                    ATTAACGATGTAAATAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTA                                                           <  SRR4302540.5523019/94‑1 (MQ=60)
                                    ATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTA                                                           <  SRR4302540.2427344/94‑1 (MQ=60)
                                    ATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTA                                                           <  SRR4302540.5523018/94‑1 (MQ=60)
                                     TTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGACCATGCAGCGCGAGGCTTTCAGGGTTGTAC                                                          >  SRR4302540.2925747/1‑94 (MQ=60)
                                     TTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAC                                                          >  SRR4302540.8128883/1‑94 (MQ=60)
                                     TTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAC                                                          >  SRR4302540.4002892/1‑94 (MQ=60)
                                     TTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAC                                                          <  SRR4302540.8489330/94‑1 (MQ=60)
                                     TTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAC                                                          >  SRR4302540.2322340/1‑94 (MQ=60)
                                     TTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAC                                                          <  SRR4302540.8879588/94‑1 (MQ=60)
                                     TTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAC                                                          >  SRR4302540.3520933/1‑94 (MQ=60)
                                     TTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTATGAACATGTAGCGCGAGGCTTTCAGGGTTGTAC                                                          >  SRR4302540.9789996/1‑94 (MQ=60)
                                      TAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACG                                                         >  SRR4302540.8651011/1‑94 (MQ=60)
                                      TAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACG                                                         >  SRR4302540.10010860/1‑94 (MQ=60)
                                      TAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACG                                                         <  SRR4302540.4973033/94‑1 (MQ=60)
                                      TAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGACAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACG                                                         >  SRR4302540.6394740/1‑94 (MQ=60)
                                       AACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGA                                                        >  SRR4302540.7947281/1‑94 (MQ=60)
                                       AACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGA                                                        >  SRR4302540.2209701/1‑94 (MQ=60)
                                          GATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAA                                                     <  SRR4302540.1051475/94‑1 (MQ=60)
                                           ATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAG                                                    <  SRR4302540.9306759/94‑1 (MQ=60)
                                           ATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAG                                                    >  SRR4302540.3939544/1‑94 (MQ=60)
                                            TGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGA                                                   >  SRR4302540.1709339/1‑94 (MQ=60)
                                            TGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGA                                                   <  SRR4302540.6133334/94‑1 (MQ=60)
                                             GTAAAAAACGGATGACAAAGCAATCAACAGCCAGAGCACTACCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAA                                                  <  SRR4302540.9100948/94‑1 (MQ=60)
                                             GTAAAAAACGGATGAACAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAA                                                  <  SRR4302540.9100949/94‑1 (MQ=60)
                                             GTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAA                                                  <  SRR4302540.9624121/94‑1 (MQ=60)
                                             GTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAA                                                  <  SRR4302540.4672682/94‑1 (MQ=60)
                                              TAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAG                                                 <  SRR4302540.4224269/94‑1 (MQ=60)
                                              TAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAG                                                 <  SRR4302540.4275149/94‑1 (MQ=60)
                                              GAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAG                                                 <  SRR4302540.1669331/94‑1 (MQ=60)
                                               AAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGC                                                >  SRR4302540.1946869/1‑94 (MQ=60)
                                               AAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGC                                                >  SRR4302540.1834618/1‑94 (MQ=60)
                                                 AAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAA                                              >  SRR4302540.1063213/1‑94 (MQ=60)
                                                  AAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAG                                             <  SRR4302540.7374987/94‑1 (MQ=60)
                                                  AAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAG                                             >  SRR4302540.9289428/1‑94 (MQ=60)
                                                  AAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAG                                             >  SRR4302540.1788745/1‑94 (MQ=60)
                                                   AACGGATGAAAAAGCAATCAACAGCCAGACCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAACGAAGCAAGG                                            >  SRR4302540.691096/1‑94 (MQ=60)
                                                    ACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGT                                           <  SRR4302540.8767789/94‑1 (MQ=60)
                                                    ACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGT                                           >  SRR4302540.7160387/1‑94 (MQ=60)
                                                     CGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTA                                          >  SRR4302540.9629061/1‑94 (MQ=60)
                                                     CGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTA                                          <  SRR4302540.249063/94‑1 (MQ=60)
                                                     CGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTA                                          >  SRR4302540.8105676/1‑94 (MQ=60)
                                                      GGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAT                                         >  SRR4302540.4674534/1‑94 (MQ=60)
                                                      GGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAT                                         <  SRR4302540.2746397/94‑1 (MQ=60)
                                                      GGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAT                                         >  SRR4302540.2700263/1‑94 (MQ=60)
                                                      GGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAT                                         <  SRR4302540.5026632/94‑1 (MQ=60)
                                                       GATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATT                                        >  SRR4302540.6197795/1‑94 (MQ=60)
                                                        ATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTT                                       <  SRR4302540.3516599/94‑1 (MQ=60)
                                                        ATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTT                                       <  SRR4302540.1243320/94‑1 (MQ=60)
                                                         TGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTC                                      >  SRR4302540.3844748/1‑94 (MQ=60)
                                                         TGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTC                                      >  SRR4302540.344960/1‑94 (MQ=60)
                                                         TGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTC                                      <  SRR4302540.3379028/94‑1 (MQ=60)
                                                          GAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCA                                     <  SRR4302540.3488085/94‑1 (MQ=60)
                                                          GAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCA                                     <  SRR4302540.3488084/94‑1 (MQ=60)
                                                          GAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCA                                     <  SRR4302540.9123960/94‑1 (MQ=60)
                                                          AAAAAAGCAATCAACAGCCAGAGCACTAACGCCAGCTCTCTGAACATGTAGCGCGAGTCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCA                                     <  SRR4302540.4845962/94‑1 (MQ=60)
                                                            AAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTCCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAA                                   >  SRR4302540.5659927/1‑94 (MQ=60)
                                                             AAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAG                                  <  SRR4302540.7835080/94‑1 (MQ=60)
                                                             AAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAG                                  <  SRR4302540.8622786/94‑1 (MQ=60)
                                                             AAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAG                                  <  SRR4302540.9443624/94‑1 (MQ=60)
                                                             AAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAG                                  <  SRR4302540.6839586/94‑1 (MQ=60)
                                                             AAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAG                                  <  SRR4302540.9613858/94‑1 (MQ=60)
                                                               AGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGG                                <  SRR4302540.3436783/94‑1 (MQ=60)
                                                               AGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGG                                <  SRR4302540.2586205/94‑1 (MQ=60)
                                                               AGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGG                                >  SRR4302540.6298777/1‑94 (MQ=60)
                                                                GCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGG                               <  SRR4302540.8584922/94‑1 (MQ=60)
                                                                 cattacatcagaggtGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGC                              >  SRR4302540.6341282/16‑94 (MQ=60)
                                                                 CAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGC                              >  SRR4302540.7431212/1‑94 (MQ=60)
                                                                 CAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGC                              >  SRR4302540.1238885/1‑94 (MQ=60)
                                                                 CAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGC                              <  SRR4302540.7753815/94‑1 (MQ=60)
                                                                 CAACCAACAGCCAGAGCACTAACGCCAACGCTCGGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGC                              <  SRR4302540.7753816/94‑1 (MQ=60)
                                                                 AAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGC                              <  SRR4302540.3143940/94‑1 (MQ=60)
                                                                  AATCAGCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCG                             <  SRR4302540.4735230/94‑1 (MQ=60)
                                                                  AATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCG                             >  SRR4302540.6130073/1‑94 (MQ=60)
                                                                  AATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCG                             >  SRR4302540.7253858/1‑94 (MQ=60)
                                                                  AATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCG                             >  SRR4302540.4790771/1‑94 (MQ=60)
                                                                  AATCAACAGCCAGAGCACTAACGCCAACGCGCTGATCATGTAGCGCGAGGCTTTCAGGCTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCG                             <  SRR4302540.3760752/94‑1 (MQ=60)
                                                                    TCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAA                           <  SRR4302540.6060233/94‑1 (MQ=60)
                                                                    TCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAA                           >  SRR4302540.7672844/1‑94 (MQ=60)
                                                                     CAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAG                          >  SRR4302540.7952951/1‑94 (MQ=60)
                                                                     CAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAG                          >  SRR4302540.4260378/1‑94 (MQ=60)
                                                                      AACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGC                         >  SRR4302540.5643456/1‑94 (MQ=60)
                                                                       ACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCT                        <  SRR4302540.7046779/94‑1 (MQ=60)
                                                                             AGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCT                  >  SRR4302540.211097/1‑94 (MQ=60)
                                                                              GAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGATGCAAGGTATTTCAAAGGGGCGAACCTCCGCCTC                 >  SRR4302540.8357856/1‑94 (MQ=60)
                                                                              GAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTC                 >  SRR4302540.7172973/1‑94 (MQ=60)
                                                                              GAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTACAAGGGGCGAAGCACCGCCTC                 >  SRR4302540.8357582/1‑94 (MQ=60)
                                                                               AGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCA                >  SRR4302540.9415665/1‑94 (MQ=60)
                                                                               AGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGGATTTCAAAGGGGCGAAGCTCCGCCTCA                >  SRR4302540.3104835/1‑94 (MQ=60)
                                                                                GCACTACCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAG               >  SRR4302540.3500445/1‑94 (MQ=60)
                                                                                GCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAG               <  SRR4302540.3629052/94‑1 (MQ=60)
                                                                                  ACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGT             >  SRR4302540.9700665/1‑94 (MQ=60)
                                                                                  ACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGT             <  SRR4302540.7646608/94‑1 (MQ=60)
                                                                                  ACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGT             >  SRR4302540.7552393/1‑94 (MQ=60)
                                                                                  ACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGT             <  SRR4302540.141708/94‑1 (MQ=60)
                                                                                  ACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGT             <  SRR4302540.1881410/94‑1 (MQ=60)
                                                                                  ACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGG             >  SRR4302540.5594812/1‑94 (MQ=60)
                                                                                  ACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGG             >  SRR4302540.2621164/1‑94 (MQ=60)
                                                                                   CTAACGCCAGCGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTG            <  SRR4302540.4847018/94‑1 (MQ=60)
                                                                                   CTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTG            <  SRR4302540.13124/94‑1 (MQ=60)
                                                                                   CTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTG            <  SRR4302540.9897788/94‑1 (MQ=60)
                                                                                   CTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTG            <  SRR4302540.7821507/94‑1 (MQ=60)
                                                                                     AACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGAC          <  SRR4302540.976380/94‑1 (MQ=60)
                                                                                     AACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGAC          <  SRR4302540.8451388/94‑1 (MQ=60)
                                                                                      ACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACC         <  SRR4302540.4758991/94‑1 (MQ=60)
                                                                                      ACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACC         <  SRR4302540.8987258/94‑1 (MQ=60)
                                                                                      ACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACC         <  SRR4302540.2724183/94‑1 (MQ=60)
                                                                                       CGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCG        >  SRR4302540.5670944/1‑94 (MQ=60)
                                                                                        GCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGCAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGA       >  SRR4302540.740379/1‑94 (MQ=60)
                                                                                        GCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGA       >  SRR4302540.628342/1‑94 (MQ=60)
                                                                                        GCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGCATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGA       >  SRR4302540.10019587/1‑94 (MQ=60)
                                                                                         CCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT      <  SRR4302540.6772460/94‑1 (MQ=60)
                                                                                         CCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT      <  SRR4302540.6513405/94‑1 (MQ=60)
                                                                                         CCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT      <  SRR4302540.5841939/94‑1 (MQ=60)
                                                                                         CCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT      <  SRR4302540.2099192/94‑1 (MQ=60)
                                                                                           AACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGG    <  SRR4302540.766567/94‑1 (MQ=60)
                                                                                           AACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGG    <  SRR4302540.7164657/94‑1 (MQ=60)
                                                                                            ACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGA   <  SRR4302540.4697589/94‑1 (MQ=60)
                                                                                            ACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGA   >  SRR4302540.2082824/1‑94 (MQ=60)
                                                                                             CGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGAG  >  SRR4302540.7748446/1‑94 (MQ=60)
                                                                                             CGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGAG  <  SRR4302540.5310797/94‑1 (MQ=60)
                                                                                             |                                                                                             
TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGAG  >  NC_000913/2317744‑2317930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑