Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,343,154 T→C R90R (CGT→CGC)  nrdA → ribonucleoside diphosphate reductase 1 alpha subunit, B1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,343,1540TC99.6% 830.4 / NA 261R90R (CGT→CGC) nrdAribonucleoside diphosphate reductase 1 alpha subunit, B1
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (128/132);  minor base G (1/0);  total (129/132)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 268 total aligned reads displayed.

ACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT  >  NC_000913/2343065‑2343243
                                                                                         |                                                                                         
aCCATTATCAAGGCTGCCGCAGACCTGATCTCCCGGGATGCGCCGGATTATCAGTAGCTCGCAGCGCGCCTGGCGATCGTCCACCTGCGCaaa                                                                                        >  1:714516/1‑93 (MQ=255)
  cATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCaaaaa                                                                                      <  1:9458917/93‑1 (MQ=255)
    ttATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAg                                                                                    >  1:4159353/1‑93 (MQ=255)
     tATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGc                                                                                   <  2:9298831/93‑1 (MQ=255)
      aTCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGcc                                                                                  <  2:6814638/93‑1 (MQ=255)
       tCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCt                                                                                 <  1:6637918/93‑1 (MQ=255)
        cAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAACAGCCTa                                                                                >  2:7901101/1‑93 (MQ=255)
        cAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTa                                                                                <  1:4474867/93‑1 (MQ=255)
        cAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTa                                                                                <  1:903688/93‑1 (MQ=255)
        cAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTa                                                                                <  1:6380934/93‑1 (MQ=255)
        cAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTa                                                                                <  1:5775691/93‑1 (MQ=255)
        cAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTa                                                                                <  1:5366076/93‑1 (MQ=255)
        cAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTa                                                                                <  2:8314864/93‑1 (MQ=255)
         aaGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAc                                                                               <  2:442143/93‑1 (MQ=255)
          aGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACg                                                                              >  2:2848972/1‑93 (MQ=255)
          aGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACg                                                                              >  1:9928803/1‑93 (MQ=255)
           ggCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACgg                                                                             >  1:6097451/1‑93 (MQ=255)
            gCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCGGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGc                                                                            <  2:5393324/93‑1 (MQ=255)
            gCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGc                                                                            <  1:4883758/93‑1 (MQ=255)
              tGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCa                                                                          >  1:2523193/1‑93 (MQ=255)
               gCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCat                                                                         >  2:7187333/1‑92 (MQ=255)
                  gCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGttt                                                                      >  2:7052341/1‑93 (MQ=255)
                    aGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGGAAAAAAGCCTACGGCCAGTTTGa                                                                    >  2:5496956/1‑93 (MQ=255)
                    aGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGa                                                                    <  2:9088814/93‑1 (MQ=255)
                     gACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAg                                                                   >  1:8569464/1‑93 (MQ=255)
                     gACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAg                                                                   <  1:1916597/93‑1 (MQ=255)
                      aCCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgc                                                                  <  2:1884326/93‑1 (MQ=255)
                        cTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgccg                                                                <  1:3014961/93‑1 (MQ=255)
                          gATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgccgcc                                                              >  2:2302492/1‑93 (MQ=255)
                          gATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgccgcc                                                              <  1:6301730/93‑1 (MQ=255)
                          gATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgccgcc                                                              <  1:324827/93‑1 (MQ=255)
                            tctcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGTCCAGTTTGAGCCGCCTg                                                            >  1:8985293/1‑93 (MQ=255)
                            tctcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTg                                                            >  2:6293814/1‑93 (MQ=255)
                              tcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcg                                                          >  1:5994587/1‑93 (MQ=255)
                              tcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcg                                                          >  1:2214227/1‑93 (MQ=255)
                               cccGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcgc                                                         >  2:7299509/1‑93 (MQ=255)
                                ccGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCt                                                        >  2:4912297/1‑93 (MQ=255)
                                 cGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTg                                                       <  1:2773101/93‑1 (MQ=255)
                                 cGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTg                                                       >  2:2111723/1‑93 (MQ=255)
                                   tGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTa                                                     <  1:6892127/93‑1 (MQ=255)
                                   tGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTa                                                     >  1:7448871/1‑93 (MQ=255)
                                    gATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTAc                                                    >  2:2753682/1‑93 (MQ=255)
                                    gATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTAc                                                    <  2:8541016/93‑1 (MQ=255)
                                    gATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTAc                                                    <  1:5463173/93‑1 (MQ=255)
                                      tGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACgc                                                  >  1:8118278/1‑92 (MQ=255)
                                         gcCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCa                                               >  2:1199603/1‑93 (MQ=255)
                                         gcCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCa                                               <  1:1195002/93‑1 (MQ=255)
                                         gcCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCa                                               <  2:4202841/93‑1 (MQ=255)
                                         gcCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCa                                               >  2:7413334/1‑93 (MQ=255)
                                         gcCGGATCATCAGTATCTCGCCGCGCGCCGGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCa                                               <  1:2458767/93‑1 (MQ=255)
                                          ccGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAACAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAc                                              <  1:8878367/93‑1 (MQ=255)
                                            ggATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgt                                            <  2:5624290/93‑1 (MQ=255)
                                            ggATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgg                                            >  2:5744357/1‑92 (MQ=255)
                                               ttATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtggt                                         >  2:1551156/1‑93 (MQ=255)
                                               ttATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtggt                                         <  2:6118711/93‑1 (MQ=255)
                                                 aTCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGa                                       >  2:1017726/1‑93 (MQ=255)
                                                  tCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGaa                                      >  1:3878473/1‑93 (MQ=255)
                                                     gTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAt                                   >  1:1863605/1‑93 (MQ=255)
                                                     gTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAt                                   <  2:8362002/93‑1 (MQ=255)
                                                     gTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAt                                   <  1:3666460/93‑1 (MQ=255)
                                                     gTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAt                                   <  2:2385598/93‑1 (MQ=255)
                                                     gTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGGGaaaag                                   >  1:8727714/1‑92 (MQ=255)
                                                        tctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGt                                >  1:4346049/1‑93 (MQ=255)
                                                        tctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGt                                <  1:3521968/93‑1 (MQ=255)
                                                        tctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGt                                <  2:3504491/93‑1 (MQ=255)
                                                         ctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTc                               <  2:2019953/93‑1 (MQ=255)
                                                            gccgcGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCgag                            >  2:8668875/1‑93 (MQ=255)
                                                             ccgcGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCgaga                           <  1:3370464/93‑1 (MQ=255)
                                                             ccgcGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCgaga                           <  1:2186389/93‑1 (MQ=255)
                                                             ccgcGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCgaga                           <  2:2812410/93‑1 (MQ=255)
                                                              cgcgcgCCTGGCGATCTTCCACCCGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAt                          <  1:7922987/93‑1 (MQ=255)
                                                               gcgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATg                         <  2:1749485/93‑1 (MQ=255)
                                                                cgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATgg                        <  1:2519898/93‑1 (MQ=255)
                                                                cgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATgg                        >  2:3873660/1‑93 (MQ=255)
                                                                  cgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGc                      <  1:1098371/93‑1 (MQ=255)
                                                                   gcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCa                     >  1:4048544/1‑93 (MQ=255)
                                                                    ccTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCaa                    <  2:401309/93‑1 (MQ=255)
                                                                    ccTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCaa                    >  1:2087654/1‑93 (MQ=255)
                                                                     cTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCaaa                   <  2:326780/93‑1 (MQ=255)
                                                                      tGGCGATCTTCCACCTGCGCAAAAAAGCCTTCGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGGTGGGCAAAt                  >  2:961973/1‑93 (MQ=255)
                                                                      tGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAAt                  <  2:9332535/93‑1 (MQ=255)
                                                                       ggCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATa                 <  1:385365/93‑1 (MQ=255)
                                                                       ggCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATa                 >  1:8259374/1‑93 (MQ=255)
                                                                       ggCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATa                 <  1:6168132/93‑1 (MQ=255)
                                                                          gATCTTCCCCCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa              <  1:4680928/93‑1 (MQ=255)
                                                                          gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa              >  2:3333920/1‑93 (MQ=255)
                                                                           aTCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAt             >  1:1795132/1‑93 (MQ=255)
                                                                           aTCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAt             >  2:6284781/1‑93 (MQ=255)
                                                                           aTCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAt             >  1:9679883/1‑93 (MQ=255)
                                                                           aTCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAt             <  1:6244402/93‑1 (MQ=255)
                                                                           aTCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATAAGAt             >  2:3755041/1‑93 (MQ=255)
                                                                            tCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATa            >  1:5014207/1‑93 (MQ=255)
                                                                               tCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatc         >  2:7730103/1‑93 (MQ=255)
                                                                                ccACCTGCGCAAAAAGGCCTACGGCCAGTTGGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatca        <  1:5580795/93‑1 (MQ=255)
                                                                                ccACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatca        <  1:8662400/93‑1 (MQ=255)
                                                                                  aCCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatcatc      <  2:3018480/93‑1 (MQ=255)
                                                                                   ccTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATct     >  2:9783852/1‑93 (MQ=255)
                                                                                    cTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctg    >  1:3741571/1‑93 (MQ=255)
                                                                                      gcgcAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctgct  >  1:3471299/1‑93 (MQ=255)
                                                                                      gcgcAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctgct  <  1:4703398/93‑1 (MQ=255)
                                                                                         |                                                                                         
ACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT  >  NC_000913/2343065‑2343243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA  >  NC_000913/2343061‑2343247
                                                                                             |                                                                                             
CGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGC                                                                                               >  SRR4302540.4408217/1‑94 (MQ=60)
 GAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCA                                                                                              >  SRR4302540.5229279/1‑94 (MQ=60)
   AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAA                                                                                            >  SRR4302540.722189/1‑94 (MQ=60)
   AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGGGATGCGCCGGATTATCAGTAGCTCGCAGCGCGCCTGGCGATCGTCCACCTGCGCAAA                                                                                            >  SRR4302540.722188/1‑94 (MQ=60)
      CATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAA                                                                                         <  SRR4302540.9571156/94‑1 (MQ=60)
      CATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAA                                                                                         <  SRR4302540.3336826/94‑1 (MQ=60)
      CATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAA                                                                                         <  SRR4302540.8211988/94‑1 (MQ=60)
      CATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTAGCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAA                                                                                         <  SRR4302540.2500549/94‑1 (MQ=60)
       ATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAG                                                                                        >  SRR4302540.4204423/1‑94 (MQ=60)
       ATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAG                                                                                        <  SRR4302540.5526191/94‑1 (MQ=60)
       ATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAG                                                                                        >  SRR4302540.4519138/1‑94 (MQ=60)
       ATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAG                                                                                        >  SRR4302540.6929770/1‑94 (MQ=60)
        TTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGC                                                                                       >  SRR4302540.2294560/1‑94 (MQ=60)
           TCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTA                                                                                    <  SRR4302540.6077856/94‑1 (MQ=60)
           TCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTA                                                                                    <  SRR4302540.6711375/94‑1 (MQ=60)
           TCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGAATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTA                                                                                    >  SRR4302540.3193976/1‑94 (MQ=60)
            cgaagccgccccagcgctgcgCTCCCGTGCTACGCCGGATGATCAGTATCTCGCCGCGCGCCTGGCTATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   <  SRR4302540.5839495/73‑1 (MQ=60)
            CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   <  SRR4302540.8472506/94‑1 (MQ=60)
            CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   <  SRR4302540.2788119/94‑1 (MQ=60)
            CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   <  SRR4302540.4523410/94‑1 (MQ=60)
            CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   <  SRR4302540.913281/94‑1 (MQ=60)
            CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   <  SRR4302540.5425033/94‑1 (MQ=60)
            CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   <  SRR4302540.5814499/94‑1 (MQ=60)
            CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   <  SRR4302540.5839494/94‑1 (MQ=60)
            CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   >  SRR4302540.8304235/1‑94 (MQ=60)
            CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   <  SRR4302540.6451972/94‑1 (MQ=60)
            CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC                                                                                   <  SRR4302540.1391752/94‑1 (MQ=60)
             AAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACG                                                                                  >  SRR4302540.10044710/1‑94 (MQ=60)
              AGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGG                                                                                 >  SRR4302540.6165326/1‑94 (MQ=60)
               GGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGC                                                                                >  SRR4302540.9545638/1‑94 (MQ=60)
                GCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCC                                                                               <  SRR4302540.4936216/94‑1 (MQ=60)
                 ctgccggagtgctgcTCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCA                                                                              <  SRR4302540.2076659/79‑1 (MQ=60)
                 CTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCA                                                                              >  SRR4302540.2550432/1‑94 (MQ=60)
                   GCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGT                                                                            <  SRR4302540.8892121/94‑1 (MQ=60)
                   GCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGT                                                                            <  SRR4302540.5872339/94‑1 (MQ=60)
                    CCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTTCGGCCAGTT                                                                           <  SRR4302540.374109/94‑1 (MQ=60)
                        AGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAG                                                                       >  SRR4302540.8669001/1‑94 (MQ=60)
                        AGACCTGATCGCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCTATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAG                                                                       <  SRR4302540.4489120/94‑1 (MQ=60)
                         GACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGC                                                                      <  SRR4302540.2538311/94‑1 (MQ=60)
                         GACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGC                                                                      >  SRR4302540.9220441/1‑94 (MQ=60)
                         GACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGC                                                                      <  SRR4302540.1937513/94‑1 (MQ=60)
                            CTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGC                                                                   <  SRR4302540.3048112/94‑1 (MQ=60)
                              GATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCT                                                                 <  SRR4302540.328081/94‑1 (MQ=60)
                              GATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCT                                                                 <  SRR4302540.6371911/94‑1 (MQ=60)
                              GATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCT                                                                 <  SRR4302540.6371910/94‑1 (MQ=60)
                              GATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCT                                                                 >  SRR4302540.9059942/1‑94 (MQ=60)
                               ATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGTCCAGTTTGAGCCGCCTG                                                                >  SRR4302540.9092608/1‑94 (MQ=60)
                                TCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGC                                                               >  SRR4302540.4576463/1‑94 (MQ=60)
                                TCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGC                                                               >  SRR4302540.5075233/1‑94 (MQ=60)
                                 CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCCAACAAGCCTACGGCCAGTTTGAGCCGCCTGCG                                                              >  SRR4302540.8005447/1‑94 (MQ=60)
                                 CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG                                                              >  SRR4302540.2238129/1‑94 (MQ=60)
                                 CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG                                                              >  SRR4302540.3118329/1‑94 (MQ=60)
                                 CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG                                                              >  SRR4302540.6061005/1‑94 (MQ=60)
                                  TCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGC                                                             >  SRR4302540.2017868/1‑94 (MQ=60)
                                   CCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCT                                                            <  SRR4302540.6198081/94‑1 (MQ=60)
                                   CCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCT                                                            >  SRR4302540.5481392/1‑94 (MQ=60)
                                   CCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCT                                                            <  SRR4302540.3492931/94‑1 (MQ=60)
                                    CCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTG                                                           >  SRR4302540.4915002/1‑94 (MQ=60)
                                    CCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTG                                                           >  SRR4302540.1776086/1‑94 (MQ=60)
                                     CGTGATGCGCCGGATTATCAGTATCTCGCCGGCCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGT                                                          <  SRR4302540.1844037/94‑1 (MQ=60)
                                     CGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGT                                                          >  SRR4302540.6299903/1‑94 (MQ=60)
                                     CGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGT                                                          <  SRR4302540.1844035/94‑1 (MQ=60)
                                     CGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGT                                                          <  SRR4302540.2803064/94‑1 (MQ=60)
                                      GTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGGCGCCTGCGCTGTA                                                         >  SRR4302540.7531889/1‑94 (MQ=60)
                                      GTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTA                                                         >  SRR4302540.4033777/1‑94 (MQ=60)
                                      GTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTA                                                         >  SRR4302540.4937994/1‑94 (MQ=60)
                                       TGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTAC                                                        <  SRR4302540.6968584/94‑1 (MQ=60)
                                        GATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACG                                                       >  SRR4302540.1901163/1‑94 (MQ=60)
                                        GATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACG                                                       <  SRR4302540.5523307/94‑1 (MQ=60)
                                         ATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGC                                                      >  SRR4302540.8212491/1‑94 (MQ=60)
                                            CGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCA                                                   >  SRR4302540.9094208/1‑94 (MQ=60)
                                             GCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAC                                                  <  SRR4302540.694792/94‑1 (MQ=60)
                                             GCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAC                                                  <  SRR4302540.1207308/94‑1 (MQ=60)
                                             GCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAC                                                  <  SRR4302540.7719060/94‑1 (MQ=60)
                                             GCCGGATCATCAGTATCTCGCCGCGCGCCGGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAC                                                  <  SRR4302540.2485221/94‑1 (MQ=60)
                                             CCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAC                                                  <  SRR4302540.3571296/94‑1 (MQ=60)
                                              CCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAACAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACG                                                 <  SRR4302540.8981111/94‑1 (MQ=60)
                                              CCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACG                                                 <  SRR4302540.2153440/94‑1 (MQ=60)
                                               CGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGT                                                <  SRR4302540.4111365/94‑1 (MQ=60)
                                               CGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGT                                                >  SRR4302540.3426768/1‑94 (MQ=60)
                                                  ATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGG                                             >  SRR4302540.4266308/1‑94 (MQ=60)
                                                   TTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTG                                            <  SRR4302540.7017801/94‑1 (MQ=60)
                                                   TTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACCGCCAGTTTGAGGCGCCTGCTCTGTACGACCACGTGGTG                                            >  SRR4302540.4341668/1‑94 (MQ=60)
                                                    TATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGA                                           <  SRR4302540.6336783/94‑1 (MQ=60)
                                                    TATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGA                                           >  SRR4302540.3716870/1‑94 (MQ=60)
                                                     ATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAA                                          >  SRR4302540.3920624/1‑94 (MQ=60)
                                                     ATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAA                                          >  SRR4302540.3920623/1‑94 (MQ=60)
                                                       CAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAA                                        <  SRR4302540.4860449/94‑1 (MQ=60)
                                                       CAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAA                                        >  SRR4302540.2623442/1‑94 (MQ=60)
                                                       CAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAA                                        >  SRR4302540.8856294/1‑94 (MQ=60)
                                                        AGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAT                                       >  SRR4302540.1884033/1‑94 (MQ=60)
                                                        AGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAT                                       <  SRR4302540.7388698/94‑1 (MQ=60)
                                                        AGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGGGAAAAG                                       >  SRR4302540.8829066/1‑94 (MQ=60)
                                                         GTATCTCGCCGCGCGCCTGGCGATCTTCTACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG                                      <  SRR4302540.4975287/94‑1 (MQ=60)
                                                         GTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG                                      >  SRR4302540.9628098/1‑94 (MQ=60)
                                                         GTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG                                      >  SRR4302540.6054134/1‑94 (MQ=60)
                                                         GTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG                                      <  SRR4302540.3706576/94‑1 (MQ=60)
                                                          tagctccgCGCGCGCCCGGCGATCCTCCCCCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGG                                     <  SRR4302540.1592480/86‑1 (MQ=60)
                                                           ATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAACAAGCCTACGGCCAGTTTGAGCCGCCTGCTCTGTACGACCACGTGGTGAACATGGG                                    >  SRR4302540.2208337/1‑94 (MQ=60)
                                                           ATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGT                                    >  SRR4302540.4393343/1‑94 (MQ=60)
                                                           ATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGT                                    >  SRR4302540.2208338/1‑94 (MQ=60)
                                                            TCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTC                                   <  SRR4302540.2804244/94‑1 (MQ=60)
                                                            TCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTC                                   <  SRR4302540.3560356/94‑1 (MQ=60)
                                                            TCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTC                                   <  SRR4302540.8787608/94‑1 (MQ=60)
                                                            TCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTC                                   <  SRR4302540.9629032/94‑1 (MQ=60)
                                                             CTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCG                                  >  SRR4302540.3917701/1‑94 (MQ=60)
                                                             CTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCG                                  >  SRR4302540.3398489/1‑94 (MQ=60)
                                                              TCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGA                                 <  SRR4302540.838286/94‑1 (MQ=60)
                                                                GCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGA                               <  SRR4302540.5500430/94‑1 (MQ=60)
                                                                 CCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGTCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAT                              <  SRR4302540.1201257/94‑1 (MQ=60)
                                                                 CCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAT                              <  SRR4302540.3407313/94‑1 (MQ=60)
                                                                 CCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAT                              <  SRR4302540.4406509/94‑1 (MQ=60)
                                                                 CCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAT                              <  SRR4302540.2209992/94‑1 (MQ=60)
                                                                 CCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAT                              <  SRR4302540.3552191/94‑1 (MQ=60)
                                                                 CCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAT                              <  SRR4302540.3822487/94‑1 (MQ=60)
                                                                  CGCGCGCCTGGCGATCTTCCACCCGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATG                             <  SRR4302540.8015340/94‑1 (MQ=60)
                                                                    CGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGTCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGG                           <  SRR4302540.4702634/94‑1 (MQ=60)
                                                                    CGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGG                           <  SRR4302540.2547109/94‑1 (MQ=60)
                                                                    CGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGG                           <  SRR4302540.2547110/94‑1 (MQ=60)
                                                                      CGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCA                         >  SRR4302540.8735959/1‑94 (MQ=60)
                                                                      CGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCA                         <  SRR4302540.1109680/94‑1 (MQ=60)
                                                                      CGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCA                         >  SRR4302540.6268891/1‑94 (MQ=60)
                                                                      CGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCA                         >  SRR4302540.4092197/1‑94 (MQ=60)
                                                                       GCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAA                        >  SRR4302540.2110088/1‑94 (MQ=60)
                                                                         CTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAAT                      >  SRR4302540.8258957/1‑94 (MQ=60)
                                                                         CTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAAT                      >  SRR4302540.6499942/1‑94 (MQ=60)
                                                                          TGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATA                     >  SRR4302540.9930956/1‑94 (MQ=60)
                                                                          TGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATA                     <  SRR4302540.2227657/94‑1 (MQ=60)
                                                                          TGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATA                     >  SRR4302540.8355354/1‑94 (MQ=60)
                                                                           GGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATAC                    <  SRR4302540.6236855/94‑1 (MQ=60)
                                                                           GGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATAC                    <  SRR4302540.389345/94‑1 (MQ=60)
                                                                            GCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACG                   <  SRR4302540.8772448/94‑1 (MQ=60)
                                                                             CGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGA                  >  SRR4302540.3915388/1‑94 (MQ=60)
                                                                              GATCTTCCTCCTGCGCAAAAAAGCCTACGGCCAGTATGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAT                 <  SRR4302540.4731006/94‑1 (MQ=60)
                                                                              GATCTTCCCCCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAT                 <  SRR4302540.4731004/94‑1 (MQ=60)
                                                                              GATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAT                 >  SRR4302540.9793776/1‑94 (MQ=60)
                                                                              GATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAT                 >  SRR4302540.9044046/1‑94 (MQ=60)
                                                                              GATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAT                 >  SRR4302540.1814654/1‑94 (MQ=60)
                                                                               ATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATA                >  SRR4302540.5068495/1‑94 (MQ=60)
                                                                               ATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATA                <  SRR4302540.6313891/94‑1 (MQ=60)
                                                                                TCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAA               <  SRR4302540.3571652/94‑1 (MQ=60)
                                                                                 CTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAAT              >  SRR4302540.2955545/1‑94 (MQ=60)
                                                                                    CCACCTGCGCAAAAAGGCCTACGGCCAGTTGGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCAT           <  SRR4302540.5642231/94‑1 (MQ=60)
                                                                                    CCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCAT           <  SRR4302540.8763007/94‑1 (MQ=60)
                                                                                    CCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCAT           <  SRR4302540.5642229/94‑1 (MQ=60)
                                                                                     CACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATC          <  SRR4302540.6456101/94‑1 (MQ=60)
                                                                                     CACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATC          >  SRR4302540.6320827/1‑94 (MQ=60)
                                                                                      ACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCT         >  SRR4302540.2307739/1‑94 (MQ=60)
                                                                                       CCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTG        >  SRR4302540.3782396/1‑94 (MQ=60)
                                                                                       CCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTG        <  SRR4302540.6149875/94‑1 (MQ=60)
                                                                                         TGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT      >  SRR4302540.3509092/1‑94 (MQ=60)
                                                                                          GCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTG     <  SRR4302540.4753660/94‑1 (MQ=60)
                                                                                             CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA  <  SRR4302540.8484811/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA  >  NC_000913/2343061‑2343247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑