Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,343,154 |
T→C |
R90R (CGT→CGC) |
nrdA → |
ribonucleoside diphosphate reductase 1 alpha subunit, B1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,343,154 | 0 | T | C | 100.0%
| 708.6
/ NA
| 222 | R90R (CGT→CGC) | nrdA | ribonucleoside diphosphate reductase 1 alpha subunit, B1 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/106); total (116/106) |
Only 100 of 233 total aligned reads displayed.
AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT > NC_000913/2343064‑2343243
|
aCCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCaaa > 1:3199633/1‑93 (MQ=255)
aCCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCaaa > 2:3889188/1‑93 (MQ=255)
cATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCaaaaa < 1:4900597/93‑1 (MQ=255)
cATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCaaaaa < 2:6250513/93‑1 (MQ=255)
aTTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCaaaaaa > 2:5093693/1‑93 (MQ=255)
ttATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAg > 1:1042211/1‑93 (MQ=255)
tCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCt > 2:1083111/1‑93 (MQ=255)
cAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTa < 2:1937657/93‑1 (MQ=255)
aaGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAc > 1:936692/1‑93 (MQ=255)
aaGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAc < 2:5328799/93‑1 (MQ=255)
aaGGCGGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAc < 1:3498250/93‑1 (MQ=255)
aGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACg > 2:3250305/1‑93 (MQ=255)
aGGATGCCGCAGACCTGATCTCCCGTGATGCTCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACg > 2:6009865/1‑93 (MQ=255)
ggCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACgg > 2:122008/1‑93 (MQ=255)
gCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGc < 2:4487402/93‑1 (MQ=255)
gCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGc < 2:3598296/93‑1 (MQ=255)
tGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCa > 2:5724004/1‑93 (MQ=255)
cGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAgct > 1:1152850/1‑91 (MQ=255)
gCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGttt > 1:564598/1‑93 (MQ=255)
aGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGa > 2:5346274/1‑93 (MQ=255)
gACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAg > 1:3509995/1‑93 (MQ=255)
gACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAg > 1:3929466/1‑93 (MQ=255)
gACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAg < 2:2135473/93‑1 (MQ=255)
gACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAg < 1:4195601/93‑1 (MQ=255)
tGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgccgc < 1:3326956/93‑1 (MQ=255)
tGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGCTTGAgccgc > 1:4076475/1‑93 (MQ=255)
gATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGATTGAgccgcc > 2:217965/1‑93 (MQ=255)
aTCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCt > 1:2611324/1‑93 (MQ=255)
aTCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCt > 2:5139699/1‑93 (MQ=255)
tcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcg > 2:2584279/1‑93 (MQ=255)
ccGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCt > 2:424019/1‑93 (MQ=255)
gTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGt < 1:1790184/93‑1 (MQ=255)
gTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGt > 2:4984914/1‑93 (MQ=255)
tGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTa < 1:2869483/93‑1 (MQ=255)
gATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTAc < 1:21825/93‑1 (MQ=255)
gATGCGCCGGACTATCAGTATCTCGCCGCGCGCCCGGCGATCTTCCACCGGCGCAAAAAAGCCTACGGCCAGGTTGAGGCGCCTGCGCTGTag > 2:3097605/1‑92 (MQ=255)
aTGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACg > 1:132300/1‑93 (MQ=255)
aTGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACg > 2:4853034/1‑93 (MQ=255)
cgcCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGAcc < 1:2282007/93‑1 (MQ=255)
ccGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAc < 1:768451/93‑1 (MQ=255)
cGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACg > 2:5364732/1‑93 (MQ=255)
ggATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgt > 2:5887894/1‑93 (MQ=255)
ggATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgt < 1:1576386/93‑1 (MQ=255)
cgATCATCAGTCTCTCGCCGCGCACCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgt < 2:5091412/92‑1 (MQ=255)
aTTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtgg < 2:2089120/93‑1 (MQ=255)
tCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGaa > 1:3170703/1‑93 (MQ=255)
cAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGaaa > 1:5414269/1‑93 (MQ=255)
cAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGaaa < 1:5527159/93‑1 (MQ=255)
gTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAt < 1:1449257/93‑1 (MQ=255)
gTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAt < 2:1176502/93‑1 (MQ=255)
aTCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATgg < 1:2704207/93‑1 (MQ=255)
tctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGt < 2:1378510/93‑1 (MQ=255)
tctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGt < 2:3621552/93‑1 (MQ=255)
tctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGt > 1:682709/1‑93 (MQ=255)
tctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGt < 2:3359771/93‑1 (MQ=255)
tccgccgcGCGGCTGGCTATCTTCCACCTGCGCAAAAAAGCCTGCGGCCAGTTTGAGCCGCCTGCGCTGTACGTCCGCGTGGTGAAAATGGTc < 2:825532/91‑1 (MQ=255)
ctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTc < 1:4548514/93‑1 (MQ=255)
ccgccgcGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCg < 2:3424783/92‑1 (MQ=255)
gccgcGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCgag < 1:615491/93‑1 (MQ=255)
ccgcGCTCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCgaga < 1:4473683/93‑1 (MQ=255)
ccgcGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCgaga > 2:2540598/1‑93 (MQ=255)
ccgcGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCgaga < 2:5947919/93‑1 (MQ=255)
cgcgcgCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAt < 2:833712/93‑1 (MQ=255)
gcgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATg < 1:4034628/93‑1 (MQ=255)
gcgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATg < 2:1489189/93‑1 (MQ=255)
cgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATgg > 1:2802180/1‑93 (MQ=255)
cgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATgg < 1:4319381/93‑1 (MQ=255)
cgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATgg > 2:3791441/1‑93 (MQ=255)
cgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATgg < 1:5776654/93‑1 (MQ=255)
cgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATgg < 1:6225060/93‑1 (MQ=255)
gcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATggg > 1:2437002/1‑93 (MQ=255)
cTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCaaa < 1:4579294/93‑1 (MQ=255)
cTGGCGATCTTCCACCTGCGCAAAAAAGACTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCaaa > 1:2155164/1‑93 (MQ=255)
tGGCGATCTTCCACCTGCGCAAAAAAGGCTACGGGCAGTTTGAGACGCCTGCGCTGTACGACCACGGGGTGAAAATGGTCGAGATGGGCAAAt > 2:2796071/1‑93 (MQ=255)
tGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAAt > 2:2995424/1‑93 (MQ=255)
tGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAAt < 2:1562052/93‑1 (MQ=255)
ggCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATa < 1:4134776/93‑1 (MQ=255)
ggCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTGGAGCCGCCTGCGCAGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATa < 2:5191513/93‑1 (MQ=255)
gCGATCTGCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTAGGACCACGTGGTGAAAATGGTCGAGATGGGCAAATAc < 2:5450837/93‑1 (MQ=255)
gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAACTGGTCGAGATGGGTAAATACGa > 2:5210887/1‑93 (MQ=255)
gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa < 2:3984402/93‑1 (MQ=255)
gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATCGTCGAGATGGGCACATACGa > 2:4640520/1‑93 (MQ=255)
tCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATa > 2:1470729/1‑93 (MQ=255)
tCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATa < 1:3572104/93‑1 (MQ=255)
tCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATa < 2:5577737/93‑1 (MQ=255)
cTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATaa > 2:1876098/1‑93 (MQ=255)
cTTCCACCTGCGCAAAAAAGCCTACGGCCAATTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATaa > 1:1818758/1‑93 (MQ=255)
ttCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAat < 2:1656290/93‑1 (MQ=255)
ttCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAat < 1:5032938/93‑1 (MQ=255)
ttCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAat > 2:4145056/1‑93 (MQ=255)
tCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatc > 2:5611481/1‑93 (MQ=255)
tCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatc < 2:352156/93‑1 (MQ=255)
ccACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatca > 2:585005/1‑93 (MQ=255)
cccTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatcatc < 2:4831558/92‑1 (MQ=255)
ccTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATct < 1:3074433/93‑1 (MQ=255)
ccTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATct > 2:2670884/1‑93 (MQ=255)
ccTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATAGTCGAGATGGGCAAATACGATAATCATct > 1:5811318/1‑93 (MQ=255)
cTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctg > 1:6087605/1‑93 (MQ=255)
tGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctgc < 2:1075319/93‑1 (MQ=255)
gcgcAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctgct < 2:6068462/93‑1 (MQ=255)
|
AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT > NC_000913/2343064‑2343243
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA > NC_000913/2343061‑2343247
|
CGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGC > SRR4302533.313761/1‑94 (MQ=60)
AAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAA > SRR4302533.3997682/1‑94 (MQ=60)
AAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAA > SRR4302533.4819759/1‑94 (MQ=60)
AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAA > SRR4302533.1182225/1‑94 (MQ=60)
AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAA > SRR4302533.3219323/1‑94 (MQ=60)
AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAA > SRR4302533.1938705/1‑94 (MQ=60)
CCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAA > SRR4302533.354305/1‑94 (MQ=60)
CATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAA < SRR4302533.4930290/94‑1 (MQ=60)
ATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAG > SRR4302533.1048339/1‑94 (MQ=60)
TATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCC > SRR4302533.1426930/1‑94 (MQ=60)
ATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCT > SRR4302533.408606/1‑94 (MQ=60)
TCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTA > SRR4302533.744876/1‑94 (MQ=60)
CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC > SRR4302533.942197/1‑94 (MQ=60)
CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC < SRR4302533.5740482/94‑1 (MQ=60)
AAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACG < SRR4302533.3124973/94‑1 (MQ=60)
AAGGCGGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACG < SRR4302533.3519821/94‑1 (MQ=60)
AGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGG < SRR4302533.5826756/94‑1 (MQ=60)
GCTGCCGCGGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCC < SRR4302533.3131277/94‑1 (MQ=60)
CTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCG > SRR4302533.2429845/1‑94 (MQ=60)
CTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCA < SRR4302533.4652963/94‑1 (MQ=60)
CTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCA > SRR4302533.1738251/1‑94 (MQ=60)
CCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTT < SRR4302533.2842541/94‑1 (MQ=60)
CCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTT > SRR4302533.4151677/1‑94 (MQ=60)
CCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGCT > SRR4302533.1159753/1‑94 (MQ=60)
CGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTT > SRR4302533.567943/1‑94 (MQ=60)
GCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTG > SRR4302533.4199827/1‑94 (MQ=60)
CAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGA > SRR4302533.4415728/1‑94 (MQ=60)
AGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAG > SRR4302533.3953455/1‑94 (MQ=60)
AGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAG > SRR4302533.3531632/1‑94 (MQ=60)
AGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAG > SRR4302533.2285091/1‑94 (MQ=60)
GACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGC < SRR4302533.4220998/94‑1 (MQ=60)
ACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCC < SRR4302533.2787521/94‑1 (MQ=60)
CTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGCTTGAGCCGC > SRR4302533.4101289/1‑94 (MQ=60)
TGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCC < SRR4302533.3347513/94‑1 (MQ=60)
GATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCT < SRR4302533.4249107/94‑1 (MQ=60)
GATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCT < SRR4302533.5880951/94‑1 (MQ=60)
GATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCT > SRR4302533.2627350/1‑94 (MQ=60)
ACTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGC < SRR4302533.3866173/94‑1 (MQ=60)
CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG < SRR4302533.892474/94‑1 (MQ=60)
CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG < SRR4302533.146648/94‑1 (MQ=60)
CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG > SRR4302533.5000434/1‑94 (MQ=60)
CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTCTGAGCCGCCTGCG > SRR4302533.2744080/1‑94 (MQ=60)
CCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTG < SRR4302533.236213/94‑1 (MQ=60)
CGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGT > SRR4302533.2194867/1‑94 (MQ=60)
GTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTA < SRR4302533.1801072/94‑1 (MQ=60)
TGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTAC < SRR4302533.2887138/94‑1 (MQ=60)
TGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTAC > SRR4302533.6251562/1‑94 (MQ=60)
GATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACG > SRR4302533.133131/1‑94 (MQ=60)
GATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACG < SRR4302533.4549629/94‑1 (MQ=60)
GATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACG < SRR4302533.21970/94‑1 (MQ=60)
TCGCCGGATTAACAGTATCTCGCCCGGCCCCTGTCGACCTTCCACCTGCGCAATTAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGCCC < SRR4302533.4567314/94‑1 (MQ=44)
CGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCA < SRR4302533.2296132/94‑1 (MQ=60)
CCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAC < SRR4302533.3807017/94‑1 (MQ=60)
CCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACG < SRR4302533.772982/94‑1 (MQ=60)
CGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGT > SRR4302533.3523907/1‑94 (MQ=60)
GGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTG < SRR4302533.1585876/94‑1 (MQ=60)
GATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGG < SRR4302533.4138703/94‑1 (MQ=60)
GATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGG < SRR4302533.5566972/94‑1 (MQ=60)
TTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTG < SRR4302533.1585649/94‑1 (MQ=60)
ATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAA > SRR4302533.3190220/1‑94 (MQ=60)
TCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAA > SRR4302533.61547/1‑94 (MQ=60)
TCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAA > SRR4302533.5446826/1‑94 (MQ=60)
TCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAA > SRR4302533.5446827/1‑94 (MQ=60)
CAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAA < SRR4302533.5560527/94‑1 (MQ=60)
GTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG < SRR4302533.1458002/94‑1 (MQ=60)
GTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG < SRR4302533.3193138/94‑1 (MQ=60)
GTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG > SRR4302533.4375254/1‑94 (MQ=60)
ATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGT < SRR4302533.2720794/94‑1 (MQ=60)
ATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGT > SRR4302533.686747/1‑94 (MQ=60)
TCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTC < SRR4302533.5360016/94‑1 (MQ=60)
CTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCG < SRR4302533.2684210/94‑1 (MQ=60)
CTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCG < SRR4302533.4576061/94‑1 (MQ=60)
CGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAG > SRR4302533.1823317/1‑94 (MQ=60)
GCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGA < SRR4302533.619106/94‑1 (MQ=60)
CCGCGCTCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAT < SRR4302533.4500740/94‑1 (MQ=60)
CCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAT < SRR4302533.5493365/94‑1 (MQ=60)
GCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGG > SRR4302533.2819423/1‑94 (MQ=60)
GCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGG < SRR4302533.4059188/94‑1 (MQ=60)
CGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGG > SRR4302533.2452049/1‑94 (MQ=60)
CGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGG < SRR4302533.5811543/94‑1 (MQ=60)
CGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGG < SRR4302533.3236008/94‑1 (MQ=60)
CGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGG < SRR4302533.4345397/94‑1 (MQ=60)
CGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGG < SRR4302533.6262359/94‑1 (MQ=60)
GCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGC > SRR4302533.2377034/1‑94 (MQ=60)
GCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGC < SRR4302533.2545417/94‑1 (MQ=60)
CGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCA > SRR4302533.114070/1‑94 (MQ=60)
CCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAA > SRR4302533.64729/1‑94 (MQ=60)
CCTGGCGATCTTCCACCTGCGCAAAAAAGACTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAA > SRR4302533.2168434/1‑94 (MQ=60)
CTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAAT < SRR4302533.4607048/94‑1 (MQ=60)
TGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATA > SRR4302533.869638/1‑94 (MQ=60)
GGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATAC < SRR4302533.4159873/94‑1 (MQ=60)
GCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACG > SRR4302533.2917434/1‑94 (MQ=60)
TCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAA < SRR4302533.3594116/94‑1 (MQ=60)
TCTTCCACCTGCGCAAAAAAGCCTACGGCCAATTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAA > SRR4302533.1829867/1‑94 (MQ=60)
CTTCCCCCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGTTCGAGATGGGCAAATACGATAAT < SRR4302533.2151116/94‑1 (MQ=60)
TTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATC < SRR4302533.5063427/94‑1 (MQ=60)
CCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCAT > SRR4302533.5840381/1‑94 (MQ=60)
CCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCAT < SRR4302533.6200864/94‑1 (MQ=60)
CACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATC < SRR4302533.3454403/94‑1 (MQ=60)
ACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATAGTCGAGATGGGCAAATACGATAATCATCT > SRR4302533.5846414/1‑94 (MQ=60)
CCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTG > SRR4302533.6124405/1‑94 (MQ=60)
CCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTG < SRR4302533.3511197/94‑1 (MQ=60)
CCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTG < SRR4302533.3093305/94‑1 (MQ=60)
CTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGC < SRR4302533.4606682/94‑1 (MQ=60)
CGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGG < SRR4302533.5884515/94‑1 (MQ=60)
CGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGG < SRR4302533.2661065/94‑1 (MQ=60)
CGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGG < SRR4302533.1212529/94‑1 (MQ=60)
GCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGA < SRR4302533.3178372/94‑1 (MQ=60)
CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA < SRR4302533.590248/94‑1 (MQ=60)
CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA < SRR4302533.5720075/94‑1 (MQ=60)
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CGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA > NC_000913/2343061‑2343247
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
