Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,375,871 T→C N470S (AAC→AGC)  menD ← 2‑oxoglutarate decarboxylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,375,8710TC98.4% 759.3 / 0.7 246N470S (AAC→AGC) menD2‑oxoglutarate decarboxylase
Reads supporting (aligned to +/- strand):  ref base T (1/3);  new base C (108/134);  total (109/137)
Fisher's exact test for biased strand distribution p-value = 6.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.09e-01

Only 100 of 275 total aligned reads displayed.

GCGTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCCC  >  NC_000913/2375781‑2375960
                                                                                          |                                                                                         
 cgTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgt                                                                                        <  2:2059657/93‑1 (MQ=255)
  gTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgtt                                                                                       >  2:1480017/1‑93 (MQ=255)
   tGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgttg                                                                                      >  1:4810482/1‑93 (MQ=255)
   tGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgttg                                                                                      >  2:2862163/1‑93 (MQ=255)
   tGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgttg                                                                                      >  2:3414405/1‑93 (MQ=255)
   tGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgttg                                                                                      >  2:8777651/1‑93 (MQ=255)
    gCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgttgt                                                                                     >  1:5761104/1‑93 (MQ=255)
     cTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgttgtt                                                                                    >  1:1728126/1‑93 (MQ=255)
     cTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCgctgttgtt                                                                                    <  2:2358675/93‑1 (MQ=255)
       cAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTca                                                                                  >  1:2695800/1‑93 (MQ=255)
         aaaTGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTcacc                                                                                <  1:8268674/93‑1 (MQ=255)
         aaaTGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGATGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTcacc                                                                                >  1:5338656/1‑93 (MQ=255)
          aaTGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTcacca                                                                               >  1:811361/1‑93 (MQ=255)
          aaTGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTcacca                                                                               >  2:3840058/1‑93 (MQ=255)
             ggACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGTTGTTGTTCACCACaa                                                                            <  1:9210467/93‑1 (MQ=255)
              gACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAAt                                                                           >  1:1381071/1‑93 (MQ=255)
                  ttttGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAAt                                                                       >  1:4622782/1‑93 (MQ=255)
                  ttttGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAAt                                                                       >  2:9499228/1‑93 (MQ=255)
                    ttGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATAc                                                                     <  2:6616575/93‑1 (MQ=255)
                     tGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATAcc                                                                    <  1:2071751/93‑1 (MQ=255)
                      gCGGAATAAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAAAAATTTTGCCCGCCGCTGTTGTTCACCACAATTAATACCa                                                                   <  2:7944615/93‑1 (MQ=255)
                       cgacATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAg                                                                  <  2:6113819/90‑1 (MQ=255)
                       cGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAg                                                                  >  1:9351991/1‑93 (MQ=255)
                        ggCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAgc                                                                 >  1:2829449/1‑93 (MQ=255)
                         gCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAgcg                                                                >  2:4940403/1‑93 (MQ=255)
                         gCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAgcg                                                                >  1:8683926/1‑93 (MQ=255)
                            tCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAgcggcg                                                             >  2:7486219/1‑93 (MQ=255)
                               gATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAg                                                          >  2:9792459/1‑93 (MQ=255)
                               gATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAg                                                          >  1:3832984/1‑93 (MQ=255)
                                acaGAAACGCTCACGCTCGCTTTTCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGa                                                         <  1:3056783/91‑1 (MQ=255)
                                aTAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGa                                                         >  2:4800547/1‑93 (MQ=255)
                                 tAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAgca                                                        >  2:5639419/1‑91 (MQ=255)
                                 tAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGaa                                                        >  2:7211918/1‑93 (MQ=255)
                                  aGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGaaa                                                       >  2:9506785/1‑93 (MQ=255)
                                   gAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACACCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAAc                                                      >  2:4354828/1‑93 (MQ=255)
                                   aaaaCGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCATAAAc                                                      <  2:8260052/92‑1 (MQ=255)
                                    aaaCGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAAcc                                                     >  1:5178052/1‑93 (MQ=255)
                                    aaaCGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAAcc                                                     <  2:8562499/93‑1 (MQ=255)
                                         ctcacgctcGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACg                                                >  1:5013873/1‑93 (MQ=255)
                                          tcacgctcGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGACACCTCACGc                                               >  1:10038061/1‑93 (MQ=255)
                                           cacgctcGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCa                                              <  1:4284095/93‑1 (MQ=255)
                                            acgctcGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCaa                                             >  1:21028/1‑93 (MQ=255)
                                             cgctcgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAAt                                            >  1:5749573/1‑93 (MQ=255)
                                             cgctcgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAAt                                            >  1:6017202/1‑93 (MQ=255)
                                              gctcgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATa                                           <  1:7637064/93‑1 (MQ=255)
                                               ctcgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATaa                                          >  1:3665012/1‑93 (MQ=255)
                                                tcgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAAc                                         >  1:3314715/1‑93 (MQ=255)
                                                tcgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAAc                                         >  2:3542648/1‑93 (MQ=255)
                                                 cgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACg                                        <  1:6682179/93‑1 (MQ=255)
                                                 cgctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACg                                        >  2:5953177/1‑93 (MQ=255)
                                                  gctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGc                                       >  1:5924405/1‑93 (MQ=255)
                                                  gctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGc                                       >  2:5148141/1‑93 (MQ=255)
                                                   ctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGcc                                      >  1:6942671/1‑93 (MQ=255)
                                                   ctTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGcc                                      >  1:5892486/1‑93 (MQ=255)
                                                   ctTTGCGGCGTGGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGcc                                      <  2:8877366/93‑1 (MQ=255)
                                                    tttGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCa                                     <  1:5850001/93‑1 (MQ=255)
                                                     ttGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACTAGCGGCGCAGATACCTGACGCAATAACGCCac                                    >  1:8645313/1‑92 (MQ=255)
                                                     ttGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAg                                    <  1:5622525/93‑1 (MQ=255)
                                                     ttGCGGCCGTCGCAACACCGAAAAAATTTCCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAg                                    <  2:4016897/93‑1 (MQ=255)
                                                      tGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAgc                                   <  2:9634136/93‑1 (MQ=255)
                                                      tGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAgc                                   <  1:6843336/93‑1 (MQ=255)
                                                       gcggcgTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAgcg                                  <  1:7092699/93‑1 (MQ=255)
                                                         ggctTTGGAAAAAGTGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCACAAACTTGACGCAATAACGCCAGcgcg                                <  2:7708059/93‑1 (MQ=255)
                                                         ggcgTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGcgcg                                >  1:3497734/1‑93 (MQ=255)
                                                         ggcgTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGcgcg                                >  1:137138/1‑93 (MQ=255)
                                                         ggcgTTGGCAAAAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGcgcg                                <  1:6245415/93‑1 (MQ=255)
                                                          gctttGGCAACAGCGAGAAAATTTGCACGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGt                               <  1:3590426/90‑1 (MQ=255)
                                                          gcgTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGt                               >  1:1564236/1‑93 (MQ=255)
                                                          gcgTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGt                               >  2:1110567/1‑93 (MQ=255)
                                                            gTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTg                             >  2:8327992/1‑93 (MQ=255)
                                                             ttGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTga                            >  2:187041/1‑93 (MQ=255)
                                                             ttGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTAACGCAATAACGCCAGCGCGTTga                            >  2:9376206/1‑93 (MQ=255)
                                                              tGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTgag                           <  2:4415450/93‑1 (MQ=255)
                                                               ggCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTgaga                          <  2:8064400/93‑1 (MQ=255)
                                                               ggCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTgaga                          <  2:8347859/93‑1 (MQ=255)
                                                               ggCAACAGCAAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTgaga                          <  2:2461400/93‑1 (MQ=255)
                                                                gCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGAt                         <  1:7878053/93‑1 (MQ=255)
                                                                 cAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATc                        <  1:2690158/93‑1 (MQ=255)
                                                                  aaCAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCg                       <  1:6461122/93‑1 (MQ=255)
                                                                   aaaGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACCATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCCACGCGTTGAGAGCGt                      >  2:2034836/3‑93 (MQ=255)
                                                                   aCAGCGAGAAAATTTGCCCGCCGCTGGTGTTCACCACAATTAATACCAGCGGCGCAGAAACCGGACGCAATAACGCCAGCGCGTTGAGATCGt                      <  2:2938558/93‑1 (MQ=255)
                                                                    cAGCGAAAAAATTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTa                     <  1:2266159/93‑1 (MQ=255)
                                                                     aGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTaa                    >  2:3607244/1‑93 (MQ=255)
                                                                      gCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTaaa                   >  1:3240795/1‑93 (MQ=255)
                                                                      gCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTaaa                   <  1:1061581/93‑1 (MQ=255)
                                                                      gCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTaaa                   >  1:9127091/1‑93 (MQ=255)
                                                                       cGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAg                  <  1:3221735/93‑1 (MQ=255)
                                                                        gagaAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCACCGCGTTGAGATCGTAAAGt                 >  1:2035445/1‑93 (MQ=255)
                                                                         agaAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTg                <  2:63033/93‑1 (MQ=255)
                                                                           aaaaTTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCg              >  1:9720059/1‑93 (MQ=255)
                                                                           aaaaTTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCg              <  1:4029883/93‑1 (MQ=255)
                                                                            aattttGCCCGCTTCTGTTGGTCACCACTACTAATATCATCGGCGCTGAAACCTGACTCAATAACGCCAGCGCGGTGAGAGTGTATAGTGCgg             >  1:8947666/4‑93 (MQ=255)
                                                                             aaTTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGga            <  2:5057620/93‑1 (MQ=255)
                                                                              aTTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGgag           >  1:4328361/1‑93 (MQ=255)
                                                                               tttGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGgaga          >  1:9864727/1‑93 (MQ=255)
                                                                                 tGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGgagaga        <  1:1621023/93‑1 (MQ=255)
                                                                                   cccGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATc      <  2:8683925/93‑1 (MQ=255)
                                                                                     cgccgcTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGc    <  2:3152126/93‑1 (MQ=255)
                                                                                      gccgCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGcc   >  1:2478148/1‑93 (MQ=255)
                                                                                       ccgCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGccc  <  1:7976010/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCGTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCCC  >  NC_000913/2375781‑2375960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGCGTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCCCACAA  >  NC_000913/2375780‑2375964
                                                                                           |                                                                                             
GGCGTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTG                                                                                             >  SRR4302540.3269542/1‑94 (MQ=60)
 GCGTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGT                                                                                            >  SRR4302540.8024909/1‑94 (MQ=60)
 GCGTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGT                                                                                            <  SRR4302540.5651451/94‑1 (MQ=60)
  CGTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTT                                                                                           >  SRR4302540.6255542/1‑94 (MQ=60)
   GTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGACAATTTGCCCGCCGCTGTTG                                                                                          >  SRR4302540.5296577/1‑94 (MQ=60)
   GTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTG                                                                                          >  SRR4302540.4861970/1‑94 (MQ=60)
    TGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGT                                                                                         >  SRR4302540.5824712/1‑94 (MQ=60)
    TGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGT                                                                                         >  SRR4302540.376877/1‑94 (MQ=60)
     GCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTT                                                                                        >  SRR4302540.1746777/1‑94 (MQ=60)
       TCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCA                                                                                      >  SRR4302540.2724902/1‑94 (MQ=60)
       TCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCA                                                                                      >  SRR4302540.2914279/1‑94 (MQ=60)
        CAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCAC                                                                                     <  SRR4302540.2117302/94‑1 (MQ=60)
         AAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACC                                                                                    >  SRR4302540.4026924/1‑94 (MQ=60)
         AAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGATGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACC                                                                                    >  SRR4302540.5397185/1‑94 (MQ=60)
          AAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCA                                                                                   >  SRR4302540.819978/1‑94 (MQ=60)
          AAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCA                                                                                   <  SRR4302540.8364751/94‑1 (MQ=60)
          AAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCA                                                                                   <  SRR4302540.8364750/94‑1 (MQ=60)
           AATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCAC                                                                                  <  SRR4302540.10085204/94‑1 (MQ=60)
            ATGGACGTTTTGCGGCATCAGATAGAAACGTTCACGCTCGCTTTGCGGTGTTGGCAACAGCGAGAAAATTTGCCTGCCGCTGTTGTTCACCACA                                                                                 >  SRR4302540.9074907/1‑94 (MQ=60)
              GGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGTTGTTGTTCACCACAAT                                                                               <  SRR4302540.9320981/94‑1 (MQ=60)
              GGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAAT                                                                               >  SRR4302540.1395810/1‑94 (MQ=60)
              GGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAAT                                                                               <  SRR4302540.1391724/94‑1 (MQ=60)
                GCGTTTTGCGGCATCAGATAGAAACCCCTCCGCTCCGTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTA                                                                             <  SRR4302540.1785402/94‑1 (MQ=60)
                ACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTA                                                                             >  SRR4302540.3792829/1‑94 (MQ=60)
                 CGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAA                                                                            >  SRR4302540.3152799/1‑94 (MQ=60)
                 CGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAA                                                                            <  SRR4302540.5751952/94‑1 (MQ=60)
                  GTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAAT                                                                           >  SRR4302540.4672328/1‑94 (MQ=60)
                   TTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATA                                                                          <  SRR4302540.7329363/94‑1 (MQ=60)
                   TTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATA                                                                          >  SRR4302540.7106862/1‑94 (MQ=60)
                    TTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATAC                                                                         <  SRR4302540.9649404/94‑1 (MQ=60)
                    TTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATAC                                                                         <  SRR4302540.6972400/94‑1 (MQ=60)
                    TTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATAC                                                                         <  SRR4302540.639560/94‑1 (MQ=60)
                     TTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACC                                                                        <  SRR4302540.5273242/94‑1 (MQ=60)
                      TGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCA                                                                       <  SRR4302540.2094030/94‑1 (MQ=60)
                       GCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAG                                                                      <  SRR4302540.5133724/94‑1 (MQ=60)
                       GCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAG                                                                      >  SRR4302540.9463373/1‑94 (MQ=60)
                        CGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGC                                                                     <  SRR4302540.9449820/94‑1 (MQ=60)
                        CGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGC                                                                     <  SRR4302540.9449821/94‑1 (MQ=60)
                        CGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGC                                                                     <  SRR4302540.4678211/94‑1 (MQ=60)
                        CGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGC                                                                     <  SRR4302540.8756138/94‑1 (MQ=60)
                        CGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGC                                                                     >  SRR4302540.2860048/1‑94 (MQ=60)
                         GGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGCAAATTTGCCCGCCGCTGTTGGTCACCACCATTAATACCAGCG                                                                    >  SRR4302540.8784768/1‑94 (MQ=60)
                         GGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCG                                                                    >  SRR4302540.8784769/1‑94 (MQ=60)
                         GGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCG                                                                    >  SRR4302540.3325717/1‑94 (MQ=60)
                            ATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCG                                                                 >  SRR4302540.9849579/1‑94 (MQ=60)
                              CAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCA                                                               >  SRR4302540.7988559/1‑94 (MQ=60)
                               AGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAG                                                              >  SRR4302540.5725375/1‑94 (MQ=60)
                               AGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAG                                                              >  SRR4302540.3874691/1‑94 (MQ=60)
                               AGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAG                                                              >  SRR4302540.2780028/1‑94 (MQ=60)
                               AGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAG                                                              <  SRR4302540.8237973/94‑1 (MQ=60)
                               AGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAG                                                              >  SRR4302540.2073053/1‑94 (MQ=60)
                                aaaAGAAACGCTCACCCTCGCTTTGCGGCGTTGGCAACAGCGAAAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGA                                                             <  SRR4302540.9305022/91‑1 (MQ=60)
                                GATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGA                                                             >  SRR4302540.265563/1‑94 (MQ=60)
                                GATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGA                                                             >  SRR4302540.8107261/1‑94 (MQ=60)
                                 ACAGAAACGCTCACGCTCGCTTTTCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAA                                                            <  SRR4302540.3090321/94‑1 (MQ=60)
                                    GAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACC                                                         >  SRR4302540.5234410/1‑94 (MQ=60)
                                     AAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCT                                                        <  SRR4302540.1624620/94‑1 (MQ=60)
                                       ACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGACGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGA                                                      >  SRR4302540.4113116/1‑94 (MQ=60)
                                       ACGCTCACGCTCGCTTTGCGGCGCTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATCCCAGCGGCGCAGAAACCTGA                                                      >  SRR4302540.3516547/1‑94 (MQ=60)
                                        CGCTCACGCTCGCTTTGCGGCGTGGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGAC                                                     <  SRR4302540.8077007/94‑1 (MQ=60)
                                         GCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACG                                                    >  SRR4302540.5068160/1‑94 (MQ=60)
                                          CTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGACACCTCACGC                                                   >  SRR4302540.10154785/1‑94 (MQ=60)
                                          CTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGC                                                   >  SRR4302540.10154786/1‑94 (MQ=60)
                                            CACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAA                                                 <  SRR4302540.4330695/94‑1 (MQ=60)
                                            CACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAA                                                 >  SRR4302540.21258/1‑94 (MQ=60)
                                             ACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAAT                                                >  SRR4302540.5813023/1‑94 (MQ=60)
                                             ACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAAT                                                >  SRR4302540.6083941/1‑94 (MQ=60)
                                             ACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAAT                                                <  SRR4302540.4401414/94‑1 (MQ=60)
                                              CGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGACACCTGACGCAATA                                               >  SRR4302540.6360/1‑94 (MQ=60)
                                              CGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATA                                               >  SRR4302540.5933797/1‑94 (MQ=60)
                                              CGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATA                                               >  SRR4302540.4905731/1‑94 (MQ=60)
                                               GCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAA                                              <  SRR4302540.2503366/94‑1 (MQ=60)
                                               GCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAA                                              <  SRR4302540.1737249/94‑1 (MQ=60)
                                               GCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAA                                              <  SRR4302540.7722991/94‑1 (MQ=60)
                                               GCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAA                                              >  SRR4302540.3705121/1‑94 (MQ=60)
                                               GCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAA                                              <  SRR4302540.8985556/94‑1 (MQ=60)
                                                CTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAAC                                             >  SRR4302540.3351047/1‑94 (MQ=60)
                                                CTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAAC                                             <  SRR4302540.5846887/94‑1 (MQ=60)
                                                CTCGCTTTGCGGCGTAGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAAC                                             <  SRR4302540.1691452/94‑1 (MQ=60)
                                                  CGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGC                                           >  SRR4302540.5989866/1‑94 (MQ=60)
                                                  CGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGC                                           <  SRR4302540.6755988/94‑1 (MQ=60)
                                                  CGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGC                                           >  SRR4302540.5989865/1‑94 (MQ=60)
                                                   GCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCC                                          >  SRR4302540.5957580/1‑94 (MQ=60)
                                                   GCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCC                                          >  SRR4302540.7019953/1‑94 (MQ=60)
                                                    GTTTGCGGGGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCA                                         <  SRR4302540.3614128/94‑1 (MQ=60)
                                                     TTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACTAGCGGCGCAGATACCTGACGCAATAACGCCAC                                        >  SRR4302540.8745740/1‑94 (MQ=60)
                                                     TTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAG                                        <  SRR4302540.5914699/94‑1 (MQ=60)
                                                     TTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAG                                        <  SRR4302540.9563065/94‑1 (MQ=60)
                                                      TTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGC                                       <  SRR4302540.2222110/94‑1 (MQ=60)
                                                      TTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGC                                       <  SRR4302540.5684390/94‑1 (MQ=60)
                                                       TGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCG                                      <  SRR4302540.6919141/94‑1 (MQ=60)
                                                        GCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGC                                     <  SRR4302540.7171627/94‑1 (MQ=60)
                                                         CGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCG                                    >  SRR4302540.5483063/1‑94 (MQ=60)
                                                         CGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCG                                    >  SRR4302540.138572/1‑94 (MQ=60)
                                                         CGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCG                                    >  SRR4302540.3535826/1‑94 (MQ=60)
                                                          GGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGT                                   >  SRR4302540.1581405/1‑94 (MQ=60)
                                                          GGCGTTGGCAAAAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGT                                   <  SRR4302540.6314921/94‑1 (MQ=60)
                                                           GCTTTGGCAACAGCGAGAAAATTTGCACGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTT                                  <  SRR4302540.3629647/94‑1 (MQ=60)
                                                           GCGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTT                                  <  SRR4302540.5965673/94‑1 (MQ=60)
                                                            CGTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTG                                 >  SRR4302540.6624015/1‑94 (MQ=60)
                                                             GTTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGA                                <  SRR4302540.1560231/94‑1 (MQ=60)
                                                              TTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAG                               <  SRR4302540.1327340/94‑1 (MQ=60)
                                                              TTGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAG                               <  SRR4302540.9874329/94‑1 (MQ=60)
                                                               TGGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGA                              <  SRR4302540.5824075/94‑1 (MQ=60)
                                                                GGCAACAGGGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGAT                             <  SRR4302540.2596174/94‑1 (MQ=60)
                                                                GGCAACAGCGAGAAAATTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGgaagcgcgtgcagag                             >  SRR4302540.2215/1‑79 (MQ=60)
                                                                GGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGAT                             <  SRR4302540.2998567/94‑1 (MQ=60)
                                                                GGCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGAT                             <  SRR4302540.2778144/94‑1 (MQ=60)
                                                                 GCAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATC                            <  SRR4302540.7970062/94‑1 (MQ=60)
                                                                  CAACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCG                           <  SRR4302540.2719221/94‑1 (MQ=60)
                                                                   AACAGCGATAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGT                          <  SRR4302540.4345831/94‑1 (MQ=60)
                                                                   AACAGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGT                          <  SRR4302540.6533032/94‑1 (MQ=60)
                                                                     CAGCGAGAAAATGTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAA                        <  SRR4302540.4268640/94‑1 (MQ=60)
                                                                     CAGCGAAAAAATTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAA                        <  SRR4302540.2290477/94‑1 (MQ=60)
                                                                      AGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAA                       >  SRR4302540.3276062/1‑94 (MQ=60)
                                                                      AGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAA                       >  SRR4302540.6243296/1‑94 (MQ=60)
                                                                      AGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAA                       <  SRR4302540.594003/94‑1 (MQ=60)
                                                                      AGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAA                       >  SRR4302540.3276061/1‑94 (MQ=60)
                                                                      AGCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAA                       >  SRR4302540.9236802/1‑94 (MQ=60)
                                                                      AGCGAGAAAATTTCCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAA                       <  SRR4302540.3995468/94‑1 (MQ=60)
                                                                       GCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAG                      <  SRR4302540.1972688/94‑1 (MQ=60)
                                                                       GCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAG                      <  SRR4302540.1072390/94‑1 (MQ=60)
                                                                       GCGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAG                      <  SRR4302540.7695685/94‑1 (MQ=60)
                                                                        CGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGT                     <  SRR4302540.3256748/94‑1 (MQ=60)
                                                                        CGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGT                     >  SRR4302540.6786674/1‑94 (MQ=60)
                                                                        CGAGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCACCGCGTTGAGATCGTAAAGT                     >  SRR4302540.2057395/1‑94 (MQ=60)
                                                                          AGAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGC                   >  SRR4302540.443996/1‑94 (MQ=60)
                                                                          AGAAAATTTCCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGC                   <  SRR4302540.1394178/94‑1 (MQ=60)
                                                                           GAAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCG                  >  SRR4302540.9834252/1‑94 (MQ=60)
                                                                            AAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGG                 <  SRR4302540.4073335/94‑1 (MQ=60)
                                                                            AAAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGG                 <  SRR4302540.6667742/94‑1 (MQ=60)
                                                                             AAATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGA                <  SRR4302540.7119157/94‑1 (MQ=60)
                                                                              AATTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAG               >  SRR4302540.8990079/1‑94 (MQ=60)
                                                                              AATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAG               >  SRR4302540.2064096/1‑94 (MQ=60)
                                                                              AATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAG               >  SRR4302540.4375481/1‑94 (MQ=60)
                                                                               ATTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGA              >  SRR4302540.9979965/1‑94 (MQ=60)
                                                                                TTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAG             <  SRR4302540.3515558/94‑1 (MQ=60)
                                                                                TTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAG             <  SRR4302540.5842744/94‑1 (MQ=60)
                                                                                TTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAG             <  SRR4302540.9080508/94‑1 (MQ=60)
                                                                                TTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAG             >  SRR4302540.134895/1‑94 (MQ=60)
                                                                                TTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAG             <  SRR4302540.7891519/94‑1 (MQ=60)
                                                                                TTTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAG             <  SRR4302540.4811821/94‑1 (MQ=60)
                                                                                 TTGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGA            >  SRR4302540.5006805/1‑94 (MQ=60)
                                                                                 TTCCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGA            <  SRR4302540.229668/94‑1 (MQ=60)
                                                                                  TGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGAT           <  SRR4302540.1638793/94‑1 (MQ=60)
                                                                                  TGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGAT           <  SRR4302540.8210836/94‑1 (MQ=60)
                                                                                  TGCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGAT           <  SRR4302540.3093342/94‑1 (MQ=60)
                                                                                   GCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCGATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATC          <  SRR4302540.6952839/94‑1 (MQ=60)
                                                                                   GCCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATC          <  SRR4302540.595674/94‑1 (MQ=60)
                                                                                    CCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCG         <  SRR4302540.3566004/94‑1 (MQ=60)
                                                                                    CCCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCG         <  SRR4302540.1438648/94‑1 (MQ=60)
                                                                                     CCGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGC        <  SRR4302540.2721336/94‑1 (MQ=60)
                                                                                      CGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCC       >  SRR4302540.2504837/1‑94 (MQ=60)
                                                                                      CGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCC       >  SRR4302540.3646297/1‑94 (MQ=60)
                                                                                      CGCCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCC       <  SRR4302540.222483/94‑1 (MQ=60)
                                                                                      CGCCCCTGTTGTTCACCACAATTAATGCCAGCAGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCC       <  SRR4302540.222484/94‑1 (MQ=60)
                                                                                        CCGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCCCA     <  SRR4302540.8068929/94‑1 (MQ=60)
                                                                                         CGCTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCCCAC    >  SRR4302540.7933898/1‑94 (MQ=60)
                                                                                           CTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCCCACAA  <  SRR4302540.2422491/94‑1 (MQ=60)
                                                                                           |                                                                                             
GGCGTGCTCAAAATGGACGTTTTGCGGCATCAGATAGAAACGCTCACGCTCGCTTTGCGGCGTTGGCAACAGCGAGAAAATTTGCCCGCCGTTGTTGTTCACCACAATTAATACCAGCGGCGCAGAAACCTGACGCAATAACGCCAGCGCGTTGAGATCGTAAAGTGCGGAGAGATCGCCCACAA  >  NC_000913/2375780‑2375964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑