Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,391,348 |
A→G |
A573A (GCT→GCC) |
nuoL ← |
NADH dehydrogenase I chain L |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,391,348 | 0 | A | G | 100.0%
| 755.0
/ NA
| 235 | A573A (GCT→GCC) | nuoL | NADH dehydrogenase I chain L |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (108/127); total (108/127) |
Only 100 of 239 total aligned reads displayed.
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG > NC_000913/2391258‑2391437
|
gACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGc < 1:7604815/93‑1 (MQ=255)
gACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGc < 2:4786459/93‑1 (MQ=255)
aCCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGcc < 1:1732480/93‑1 (MQ=255)
aCCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGcc < 1:9197543/93‑1 (MQ=255)
aCCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGcc > 2:6339961/1‑93 (MQ=255)
gCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCggg > 1:1313171/1‑93 (MQ=255)
gCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCggg > 2:308162/1‑93 (MQ=255)
gCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCggg > 2:880945/1‑93 (MQ=255)
cACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGa > 2:8570513/1‑93 (MQ=255)
aCCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGAt < 1:7819829/93‑1 (MQ=255)
ccGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGTAAGGACGGCCGGGATg > 1:1151760/1‑93 (MQ=255)
aTGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtc > 1:6784849/1‑93 (MQ=255)
gCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtcat < 2:1698778/93‑1 (MQ=255)
gCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtcat > 2:1004174/1‑93 (MQ=255)
cATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCCAAGCGGGAAAGGACGGCCGGGATGTTcatcat > 1:6532717/1‑93 (MQ=255)
tGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTg > 1:2690419/1‑93 (MQ=255)
ggATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGa < 1:5821851/93‑1 (MQ=255)
gATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAg > 1:5590285/1‑93 (MQ=255)
tGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGtt < 1:2607170/93‑1 (MQ=255)
tGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGtt < 2:9104779/93‑1 (MQ=255)
gCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTc < 1:8226225/93‑1 (MQ=255)
ccACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCCAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCa > 1:6943641/1‑93 (MQ=255)
ccACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCa < 1:6679167/93‑1 (MQ=255)
cacaTACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAg < 1:8391052/93‑1 (MQ=255)
cacaTACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAg > 1:6577554/1‑93 (MQ=255)
tACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGa < 1:9558628/93‑1 (MQ=255)
tACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGa < 1:7985766/93‑1 (MQ=255)
caCCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGa < 1:5416495/92‑1 (MQ=255)
aCCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAt > 2:8900135/1‑93 (MQ=255)
aCCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAt < 2:9138403/93‑1 (MQ=255)
ccAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGGAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATc < 2:8267916/93‑1 (MQ=255)
ccAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATc < 1:8510816/93‑1 (MQ=255)
ccAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATc < 1:1835151/93‑1 (MQ=255)
cAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATcg < 1:4773189/93‑1 (MQ=255)
cAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATcg < 2:4336603/93‑1 (MQ=255)
cAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGGTCAGCGGATcg > 2:6848618/1‑93 (MQ=255)
gcgcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGTGATGTTCATCATTGAGTTCAGCGGATcgcg < 1:7459518/93‑1 (MQ=255)
gcgcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATcgcg > 2:7471966/1‑93 (MQ=255)
cgcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGt < 1:2010278/93‑1 (MQ=255)
cgcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGt > 2:4651712/1‑93 (MQ=255)
cgcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGt > 1:6811340/1‑93 (MQ=255)
gcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGtt < 1:5078565/93‑1 (MQ=255)
cAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGTACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGttt < 2:2631468/93‑1 (MQ=255)
aGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTc < 1:4585943/93‑1 (MQ=255)
aGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTc < 1:4480313/93‑1 (MQ=255)
aTAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAg > 1:826534/1‑93 (MQ=255)
tAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGc < 1:1750796/93‑1 (MQ=255)
tAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGc > 2:7371657/1‑93 (MQ=255)
aGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCa < 2:6432924/93‑1 (MQ=255)
gCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCaa < 2:2834071/93‑1 (MQ=255)
cGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAcc > 1:3084852/1‑93 (MQ=255)
gTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCa < 2:2496872/93‑1 (MQ=255)
gTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCa < 2:1118132/93‑1 (MQ=255)
gTTCTCACTTAACAGCAGACATGTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCa < 2:3464731/93‑1 (MQ=255)
ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg > 1:6130966/1‑93 (MQ=255)
ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg > 2:6681042/1‑93 (MQ=255)
tctcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAgg < 1:8850936/93‑1 (MQ=255)
ctcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGc > 1:3294001/1‑93 (MQ=255)
tcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCa > 2:2087052/1‑93 (MQ=255)
tcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCa < 2:972500/93‑1 (MQ=255)
tcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCa < 1:9131374/93‑1 (MQ=255)
cACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCaa > 2:7335298/1‑93 (MQ=255)
aCTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAt < 1:7876416/93‑1 (MQ=255)
cTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATa > 1:4285573/1‑93 (MQ=255)
ttAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAc < 2:8022388/93‑1 (MQ=255)
ttAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAc > 2:186589/1‑93 (MQ=255)
ttAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAc < 1:5168007/93‑1 (MQ=255)
aaCAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGGTTCAGCAACCAGGCAATAccc > 2:7127278/1‑93 (MQ=255)
aCAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCa < 2:1471696/93‑1 (MQ=255)
agcagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAgg < 2:5477006/93‑1 (MQ=255)
agcagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAgg < 2:5303064/93‑1 (MQ=255)
cagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGaa < 1:2229337/93‑1 (MQ=255)
gACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACg > 1:6865104/1‑93 (MQ=255)
gACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACg > 1:3991681/1‑93 (MQ=255)
aCCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACgg < 1:8562931/93‑1 (MQ=255)
ccTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGc < 2:1368345/93‑1 (MQ=255)
cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCt > 1:5767626/1‑93 (MQ=255)
cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCt < 2:8318832/93‑1 (MQ=255)
tttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCtt > 1:3030929/1‑93 (MQ=255)
tttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCtt > 1:2480278/1‑93 (MQ=255)
tttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCtt > 2:7713328/1‑93 (MQ=255)
tttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCtt < 2:373889/93‑1 (MQ=255)
ttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTg < 1:4760948/93‑1 (MQ=255)
tACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGa > 1:6039687/1‑93 (MQ=255)
tACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGa < 2:7884754/93‑1 (MQ=255)
tccTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGAc < 1:4891956/92‑1 (MQ=255)
aCCTGCAAAGCGGGAAAGGCCGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTGTCAGCAACCAGGCAATACCCAGGAACGGCTTGAc < 1:7169724/93‑1 (MQ=255)
tGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGaa < 2:3901145/93‑1 (MQ=255)
cgCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGaa < 1:3386130/92‑1 (MQ=255)
aGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACtt < 2:1001066/93‑1 (MQ=255)
gCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACttt > 1:1461894/1‑93 (MQ=255)
cGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTg < 1:6255420/93‑1 (MQ=255)
gcgAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATCCCCAGGAACGGCTTGACGAACACTTTGt < 2:9394126/91‑1 (MQ=255)
ggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTc < 2:8654428/93‑1 (MQ=255)
ggAAAGGACGGCCGGGATGTTCATCATTAAGTTCGGGGGATCCGGTTTCGCCAACAAGGAATAACCAAGGAACGGCTTACCGAAACCttttta > 2:5422203/1‑90 (MQ=255)
gAAAGGACGGCCGGGATGTTCATCATTGAGTGCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCa < 2:1535611/93‑1 (MQ=255)
aGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATAc < 1:5628984/93‑1 (MQ=255)
ggACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACa < 1:9830755/93‑1 (MQ=255)
agACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACa < 1:8601493/92‑1 (MQ=255)
gACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCGACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAg < 2:3186115/93‑1 (MQ=255)
|
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG > NC_000913/2391258‑2391437
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAGCCAG > NC_000913/2391255‑2391441
|
CACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACG < SRR4302540.9874742/94‑1 (MQ=60)
CACAACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACG < SRR4302540.7167177/94‑1 (MQ=60)
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCC < SRR4302540.1444260/94‑1 (MQ=60)
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCC < SRR4302540.7690264/94‑1 (MQ=60)
ACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCG < SRR4302540.9307872/94‑1 (MQ=60)
ACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCG < SRR4302540.1751180/94‑1 (MQ=60)
CCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGG < SRR4302540.409307/94‑1 (MQ=60)
CGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGG > SRR4302540.1326818/1‑94 (MQ=60)
CACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGAT < SRR4302540.3365980/94‑1 (MQ=60)
CACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGAT < SRR4302540.1600281/94‑1 (MQ=60)
CACCCATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGAT < SRR4302540.4814287/94‑1 (MQ=60)
ACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGTAAGGACGGCCGGGATG > SRR4302540.1163761/1‑94 (MQ=60)
ACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATG > SRR4302540.8978526/1‑94 (MQ=60)
ACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATG < SRR4302540.7911216/94‑1 (MQ=60)
ACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATG < SRR4302540.7942164/94‑1 (MQ=60)
GATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTC > SRR4302540.6859874/1‑94 (MQ=60)
GATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTC > SRR4302540.8437355/1‑94 (MQ=60)
ATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCA > SRR4302540.1942159/1‑94 (MQ=60)
GCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATC > SRR4302540.5589778/1‑94 (MQ=60)
CTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCA < SRR4302540.5004630/94‑1 (MQ=60)
TCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCCAAGCGGGAAAGGACGGCCGGGATGTTCATCAT > SRR4302540.6605240/1‑94 (MQ=60)
TCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCAT > SRR4302540.5786763/1‑94 (MQ=60)
TCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCAT > SRR4302540.158305/1‑94 (MQ=60)
CATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATT < SRR4302540.9279646/94‑1 (MQ=60)
aacGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCGGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTG < SRR4302540.2512296/91‑1 (MQ=60)
ATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTG > SRR4302540.2719486/1‑94 (MQ=60)
ATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTG > SRR4302540.6927817/1‑94 (MQ=60)
ATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTG > SRR4302540.230944/1‑94 (MQ=60)
TGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGA < SRR4302540.460773/94‑1 (MQ=60)
GGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAG < SRR4302540.5886201/94‑1 (MQ=60)
GGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAG < SRR4302540.8560335/94‑1 (MQ=60)
GGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAG > SRR4302540.5651803/1‑94 (MQ=60)
agccaacttaccgcgccaaaAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTC < SRR4302540.4692936/74‑1 (MQ=60)
TGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTC > SRR4302540.6799268/1‑94 (MQ=60)
TGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTC < SRR4302540.2635307/94‑1 (MQ=60)
GCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCCAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCA > SRR4302540.7020929/1‑94 (MQ=60)
GCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCA < SRR4302540.8321851/94‑1 (MQ=60)
GCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCA < SRR4302540.8321852/94‑1 (MQ=60)
CCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAG < SRR4302540.2856632/94‑1 (MQ=60)
CCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAG > SRR4302540.6650407/1‑94 (MQ=60)
CCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAG < SRR4302540.6752944/94‑1 (MQ=60)
CACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGC < SRR4302540.5183653/94‑1 (MQ=60)
CACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGC < SRR4302540.8488420/94‑1 (MQ=60)
CACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGC < SRR4302540.5834392/94‑1 (MQ=60)
CCATACCAGCGCAGATATCCCTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCG < SRR4302540.2220206/94‑1 (MQ=60)
ACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCG > SRR4302540.7036762/1‑94 (MQ=60)
TACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAT < SRR4302540.9671646/94‑1 (MQ=60)
TACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAT < SRR4302540.5476057/94‑1 (MQ=60)
TACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAT < SRR4302540.8078758/94‑1 (MQ=60)
TACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAT < SRR4302540.9671645/94‑1 (MQ=60)
CACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAT < SRR4302540.5476058/94‑1 (MQ=60)
ACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATC > SRR4302540.8658261/1‑94 (MQ=60)
CCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCG < SRR4302540.8609724/94‑1 (MQ=60)
CCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCG < SRR4302540.1855239/94‑1 (MQ=60)
CAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGC < SRR4302540.4824180/94‑1 (MQ=60)
GCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGTGATGTTCATCATTGAGTTCAGCGGATCGCGT < SRR4302540.7542692/94‑1 (MQ=60)
GCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGT > SRR4302540.6886705/1‑94 (MQ=60)
CGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTT < SRR4302540.2032017/94‑1 (MQ=60)
GCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTT < SRR4302540.5133473/94‑1 (MQ=60)
GCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTT > SRR4302540.7486155/1‑94 (MQ=60)
AGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCA > SRR4302540.8614945/1‑94 (MQ=60)
AGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCA < SRR4302540.4623801/94‑1 (MQ=60)
AGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCA < SRR4302540.6486460/94‑1 (MQ=60)
AGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCA < SRR4302540.4528899/94‑1 (MQ=60)
AGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCA < SRR4302540.4635343/94‑1 (MQ=60)
GATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAG > SRR4302540.835323/1‑94 (MQ=60)
TAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCA < SRR4302540.1769760/94‑1 (MQ=60)
AGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAA > SRR4302540.9742388/1‑94 (MQ=60)
GCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAC > SRR4302540.3993357/1‑94 (MQ=60)
CCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACC > SRR4302540.3118699/1‑94 (MQ=60)
CCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACC < SRR4302540.5275443/94‑1 (MQ=60)
GTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAG > SRR4302540.6199252/1‑94 (MQ=60)
TTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGG < SRR4302540.2709091/94‑1 (MQ=60)
TTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGG < SRR4302540.3102552/94‑1 (MQ=60)
TCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGC < SRR4302540.8953329/94‑1 (MQ=60)
TCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGC > SRR4302540.3330046/1‑94 (MQ=60)
CTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCCAACAGGCA > SRR4302540.77903/1‑94 (MQ=60)
CTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCA > SRR4302540.77902/1‑94 (MQ=60)
TCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAA < SRR4302540.9241121/94‑1 (MQ=60)
TCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAA > SRR4302540.8287822/1‑94 (MQ=60)
CACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAT < SRR4302540.1845687/94‑1 (MQ=60)
CACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAA > SRR4302540.1752562/1‑94 (MQ=60)
ACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATC > SRR4302540.6877645/1‑94 (MQ=60)
ACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATA < SRR4302540.7968410/94‑1 (MQ=60)
ACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATA > SRR4302540.6877646/1‑94 (MQ=60)
ACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATA < SRR4302540.7968411/94‑1 (MQ=60)
ACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATA > SRR4302540.4332190/1‑94 (MQ=60)
ACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATA > SRR4302540.1214869/1‑94 (MQ=60)
CTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAC > SRR4302540.5686212/1‑94 (MQ=60)
CGTAACATCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAC < SRR4302540.3270113/94‑1 (MQ=60)
TTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACC < SRR4302540.5224220/94‑1 (MQ=60)
TTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACC < SRR4302540.483019/94‑1 (MQ=60)
TAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGTCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCC < SRR4302540.4833703/94‑1 (MQ=60)
TAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCC > SRR4302540.5974275/1‑94 (MQ=60)
TAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCC < SRR4302540.5978763/94‑1 (MQ=60)
AGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGA > SRR4302540.441814/1‑94 (MQ=60)
AGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGA < SRR4302540.8801405/94‑1 (MQ=60)
CAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAAC < SRR4302540.2253345/94‑1 (MQ=60)
CAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCATTTCAGCAACCAGGCAATACCCAGGAAC < SRR4302540.1866584/94‑1 (MQ=60)
AGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACG > SRR4302540.6941190/1‑94 (MQ=60)
AGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACG < SRR4302540.7119775/94‑1 (MQ=60)
AGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACG > SRR4302540.4034641/1‑94 (MQ=60)
ACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGC < SRR4302540.8662375/94‑1 (MQ=60)
ACCTTCACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGC < SRR4302540.8662376/94‑1 (MQ=60)
CCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCT < SRR4302540.7639543/94‑1 (MQ=60)
CCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCT > SRR4302540.5831318/1‑94 (MQ=60)
CTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTT > SRR4302540.8077763/1‑94 (MQ=60)
CTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTT > SRR4302540.2506996/1‑94 (MQ=60)
CTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTT > SRR4302540.3064210/1‑94 (MQ=60)
TTGCCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGA < SRR4302540.9124807/94‑1 (MQ=60)
TTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGA > SRR4302540.6106752/1‑94 (MQ=60)
TTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGA < SRR4302540.6126646/94‑1 (MQ=60)
TTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGA < SRR4302540.4811756/94‑1 (MQ=60)
TCCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACG < SRR4302540.4944562/94‑1 (MQ=60)
ACCTGCAAAGCGGGAAAGGCCGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTGTCAGCAACCAGGCAATACCCAGGAACGGCTTGACG < SRR4302540.7249645/94‑1 (MQ=60)
ACCTGCAAAGCGGGAAACGACGGCCGGGATGTTCACCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACG < SRR4302540.6607394/94‑1 (MQ=60)
CCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA < SRR4302540.5655632/94‑1 (MQ=60)
CTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAA < SRR4302540.2394061/94‑1 (MQ=60)
CTGCAAAGCGGGAAAGGACGGCCGGAATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAA > SRR4302540.42660/1‑94 (MQ=60)
CGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAAC < SRR4302540.3423082/94‑1 (MQ=60)
GCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACA > SRR4302540.9444610/1‑94 (MQ=60)
GCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACA > SRR4302540.8371309/1‑94 (MQ=60)
AAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTT > SRR4302540.3044091/1‑94 (MQ=60)
AGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTT > SRR4302540.1477828/1‑94 (MQ=60)
CGGGAAAGGACGGGCGGGATGTTCATCAGTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGT < SRR4302540.6325021/94‑1 (MQ=60)
CGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGT < SRR4302540.6325022/94‑1 (MQ=60)
CGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGT < SRR4302540.4636116/94‑1 (MQ=60)
GAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCGT > SRR4302540.6701829/1‑94 (MQ=60)
GAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCAT > SRR4302540.6701830/1‑94 (MQ=60)
AAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGACCCCTTTGTGATA > SRR4302540.6202294/1‑94 (MQ=60)
AAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATA > SRR4302540.6202293/1‑94 (MQ=60)
AGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACA > SRR4302540.3223537/1‑94 (MQ=60)
AGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACA < SRR4302540.10062690/94‑1 (MQ=60)
AGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACA > SRR4302540.6959280/1‑94 (MQ=60)
AGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACA < SRR4302540.5690939/94‑1 (MQ=60)
GGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG < SRR4302540.9945733/94‑1 (MQ=60)
CGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAGCCA < SRR4302540.3868124/94‑1 (MQ=60)
GGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAGCCAG > SRR4302540.1304006/1‑94 (MQ=60)
|
CACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAGCCAG > NC_000913/2391255‑2391441
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
