Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,391,348 |
A→G |
A573A (GCT→GCC) |
nuoL ← |
NADH dehydrogenase I chain L |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,391,348 | 0 | A | G | 100.0%
| 694.0
/ NA
| 216 | A573A (GCT→GCC) | nuoL | NADH dehydrogenase I chain L |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (120/96); total (120/96) |
Only 100 of 221 total aligned reads displayed.
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG > NC_000913/2391258‑2391437
|
ccGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCg > 1:5807913/1‑93 (MQ=255)
ccGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCg > 2:619859/1‑93 (MQ=255)
acGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCg < 1:3183672/92‑1 (MQ=255)
cGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCgg < 1:1482480/93‑1 (MQ=255)
gCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCggg > 1:1269068/1‑93 (MQ=255)
cACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGa < 1:1508186/93‑1 (MQ=255)
cACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGa < 2:5178893/93‑1 (MQ=255)
cggATGCTCATGGATGCCACATACCAGCGCAGATAGCCTTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATg < 2:2326847/91‑1 (MQ=255)
ccGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATg > 1:5858220/1‑93 (MQ=255)
ccGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATg > 2:4076093/1‑93 (MQ=255)
ccGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATg > 2:1858401/1‑93 (MQ=255)
cGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGt < 2:4601562/93‑1 (MQ=255)
aTGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtc < 2:345457/93‑1 (MQ=255)
aTGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtc > 2:603607/1‑93 (MQ=255)
tGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtca < 1:2456465/93‑1 (MQ=255)
tGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtca > 1:5535001/1‑93 (MQ=255)
gCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtcat < 1:79337/93‑1 (MQ=255)
cttaTGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGCCCTTTCCCTGCAAAGCGGGAAAGGACGGCCGGGATGTtcatc < 1:1840377/90‑1 (MQ=255)
tCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGCAAGGACGGCCGGGATGTtcatca > 1:274901/1‑93 (MQ=255)
cATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTcatcat < 2:3106892/93‑1 (MQ=255)
aTGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCAtt > 1:4808290/1‑93 (MQ=255)
aTGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCAtt < 1:2344076/93‑1 (MQ=255)
tGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTg < 1:4411507/93‑1 (MQ=255)
ggATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGa < 1:1949508/93‑1 (MQ=255)
ggATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGa > 2:4032028/1‑93 (MQ=255)
gATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAg < 1:4336587/93‑1 (MQ=255)
tGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGtt > 1:2145781/1‑93 (MQ=255)
gCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTc > 2:772351/1‑93 (MQ=255)
ccACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCa < 2:1394158/93‑1 (MQ=255)
ccACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCa > 2:5379458/1‑93 (MQ=255)
ccACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCa < 1:6260715/93‑1 (MQ=255)
ccACATACCAGCGCAGATAGCCGCTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCa > 2:1699727/1‑93 (MQ=255)
cacaTACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAg < 1:4613111/93‑1 (MQ=255)
acaTACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGc > 2:4470631/1‑93 (MQ=255)
caTACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCg < 1:2018260/93‑1 (MQ=255)
tACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGa < 2:4968379/93‑1 (MQ=255)
tACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGa < 2:3026814/93‑1 (MQ=255)
aCCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAt < 2:5784512/93‑1 (MQ=255)
ccAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATc < 1:481815/93‑1 (MQ=255)
gcgcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATcgcg > 1:3672307/1‑93 (MQ=255)
aGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTc > 2:2000171/1‑93 (MQ=255)
gATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCa > 1:5736303/1‑93 (MQ=255)
gATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCa > 1:5925332/1‑93 (MQ=255)
gATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCa < 2:6303980/93‑1 (MQ=255)
gATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCa > 2:4291033/1‑93 (MQ=255)
gCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCaa > 2:2627353/1‑93 (MQ=255)
ccGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAc > 2:1500518/1‑93 (MQ=255)
ccGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAc < 2:4827892/93‑1 (MQ=255)
ccGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGCTTCAGCAAc > 1:2621741/1‑93 (MQ=255)
gTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCa > 2:4708510/1‑93 (MQ=255)
gTTCTCACTTAACAGCAGACCGTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCa < 2:2774745/93‑1 (MQ=255)
ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg < 1:753719/93‑1 (MQ=255)
ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg > 1:3790767/1‑93 (MQ=255)
ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg < 1:340621/93‑1 (MQ=255)
tctcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAgg > 2:2117393/1‑93 (MQ=255)
tctcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAgg > 2:3879623/1‑93 (MQ=255)
ctcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGCTCGCGTTTCAGCAACCAGGc < 2:3585998/93‑1 (MQ=255)
tcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCa > 2:3201109/1‑93 (MQ=255)
aCTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAt > 1:2872729/1‑93 (MQ=255)
aCTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAt > 1:478194/1‑93 (MQ=255)
aCTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAt > 2:2555480/1‑93 (MQ=255)
cTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATa > 1:5332084/1‑93 (MQ=255)
cTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATa < 1:3236547/93‑1 (MQ=255)
tAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAcc > 2:1266025/1‑93 (MQ=255)
tAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAcc > 2:103101/1‑93 (MQ=255)
aaCAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAccc < 1:3634608/93‑1 (MQ=255)
aCAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCa > 2:5457051/1‑93 (MQ=255)
cagcagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAg < 2:2688114/93‑1 (MQ=255)
cagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGaa < 1:4886800/93‑1 (MQ=255)
agACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAAc > 2:158914/1‑93 (MQ=255)
gACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCCACCAGGCAATACTCAGGAACg > 1:1004114/1‑93 (MQ=255)
gACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACg > 1:2724127/1‑93 (MQ=255)
cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCt < 2:513051/93‑1 (MQ=255)
cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCt > 2:3972082/1‑93 (MQ=255)
cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCt < 1:1110442/93‑1 (MQ=255)
cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCt > 1:5149585/1‑93 (MQ=255)
tttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATAGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCtt > 1:4433000/1‑93 (MQ=255)
tACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGa < 1:5655378/93‑1 (MQ=255)
tACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGa < 1:4217481/93‑1 (MQ=255)
tACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGa < 1:2967792/93‑1 (MQ=255)
cTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGa > 1:2780670/1‑93 (MQ=255)
tGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGaa < 1:61543/93‑1 (MQ=255)
aaGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGGTTCAACAACCAGGCAATACACAGGAACGGCTTGAAGcacaat > 1:1371527/1‑91 (MQ=255)
gCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACttt < 2:2517966/93‑1 (MQ=255)
gCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACttt > 2:2026646/1‑93 (MQ=255)
cGGGAAAGGACGGCCTGGATGCTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTg < 1:4363558/93‑1 (MQ=255)
gggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCACTACCCAGGAAAGGCTTCACGAACACTCTGt > 2:5841890/1‑93 (MQ=255)
gggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGt > 1:3090749/1‑93 (MQ=255)
ggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTc < 2:5777075/93‑1 (MQ=255)
ggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTc > 2:5502458/1‑93 (MQ=255)
gAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCa > 1:350013/1‑93 (MQ=255)
gAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCa > 2:3702075/1‑93 (MQ=255)
aaaGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCAt < 2:926626/93‑1 (MQ=255)
aaGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATa > 2:476978/1‑93 (MQ=255)
aaGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATa < 1:2290099/93‑1 (MQ=255)
ggACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTGATACa < 1:1325476/93‑1 (MQ=255)
ggACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACa < 2:5658895/93‑1 (MQ=255)
ggACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACa < 1:450921/93‑1 (MQ=255)
gACGGCCGGGATGTTCCTCATTGAGTTCAGCGGATCGCGTTGCAGCAACCAGGCAATACCCAGGAACGGCTTGACGACAACTTTGTCATACAg > 2:2891047/1‑93 (MQ=255)
gACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAg > 1:2432589/1‑93 (MQ=255)
|
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG > NC_000913/2391258‑2391437
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAGCCA > NC_000913/2391255‑2391440
|
CACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACG > SRR4302533.1023427/1‑94 (MQ=60)
ACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGG < SRR4302533.4953003/94‑1 (MQ=60)
ACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGG < SRR4302533.4026373/94‑1 (MQ=60)
CGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGC < SRR4302533.2225105/94‑1 (MQ=60)
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCC < SRR4302533.729903/94‑1 (MQ=60)
ACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCG > SRR4302533.3313347/1‑94 (MQ=60)
ACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCG < SRR4302533.541676/94‑1 (MQ=60)
ACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCG > SRR4302533.5842985/1‑94 (MQ=60)
ACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCG < SRR4302533.3170321/94‑1 (MQ=60)
CCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGG < SRR4302533.1093125/94‑1 (MQ=60)
ACGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGG < SRR4302533.3203254/94‑1 (MQ=60)
CGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGG > SRR4302533.1276664/1‑94 (MQ=60)
CGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGG < SRR4302533.1491430/94‑1 (MQ=60)
GCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGA > SRR4302533.2056099/1‑94 (MQ=60)
CACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGAT < SRR4302533.1517277/94‑1 (MQ=60)
CACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGAT > SRR4302533.2754273/1‑94 (MQ=60)
ACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATG > SRR4302533.5893635/1‑94 (MQ=60)
ACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATG < SRR4302533.4529710/94‑1 (MQ=60)
ATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCA > SRR4302533.5568416/1‑94 (MQ=60)
TGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCAT < SRR4302533.2471625/94‑1 (MQ=60)
GCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATC < SRR4302533.79844/94‑1 (MQ=60)
CTTATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGCCCTTTCCCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCA < SRR4302533.1851598/94‑1 (MQ=60)
CTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGCAAGGACGGCCGGGATGTTCATCA > SRR4302533.276575/1‑94 (MQ=60)
CATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATT > SRR4302533.4837400/1‑94 (MQ=60)
ATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTG > SRR4302533.1488537/1‑94 (MQ=60)
ATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTG < SRR4302533.2358585/94‑1 (MQ=60)
TGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGA < SRR4302533.4438150/94‑1 (MQ=60)
GGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAG < SRR4302533.1961392/94‑1 (MQ=60)
GATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGT < SRR4302533.4362720/94‑1 (MQ=60)
ATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTT > SRR4302533.2158998/1‑94 (MQ=60)
ATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTT > SRR4302533.2860646/1‑94 (MQ=60)
ATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGACGGGATGTTCATCATTGAGTT > SRR4302533.1790623/1‑94 (MQ=60)
CCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAG > SRR4302533.4708978/1‑94 (MQ=60)
CCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAG < SRR4302533.6298145/94‑1 (MQ=60)
CCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAG < SRR4302533.1504452/94‑1 (MQ=60)
CACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGC < SRR4302533.4641056/94‑1 (MQ=60)
ACNTNCNANCGCAGATAGCCNNNCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCG < SRR4302533.2309009/94‑1 (MQ=60)
CATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGG < SRR4302533.2030696/94‑1 (MQ=60)
ATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGA > SRR4302533.4876907/1‑94 (MQ=60)
CCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCG < SRR4302533.5574427/94‑1 (MQ=60)
CCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCG < SRR4302533.484693/94‑1 (MQ=60)
CAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGC < SRR4302533.5692646/94‑1 (MQ=60)
AGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCG > SRR4302533.4900242/1‑94 (MQ=60)
AGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCG > SRR4302533.3694876/1‑94 (MQ=60)
AGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCG > SRR4302533.6276067/1‑94 (MQ=60)
AGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCG > SRR4302533.1372107/1‑94 (MQ=60)
GCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTT > SRR4302533.2163843/1‑94 (MQ=60)
GCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTT < SRR4302533.4366692/94‑1 (MQ=60)
AGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCA > SRR4302533.5770926/1‑94 (MQ=60)
AGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCA > SRR4302533.5961153/1‑94 (MQ=60)
ATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGC > SRR4302533.2140424/1‑94 (MQ=60)
ATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTGTCAGC > SRR4302533.1325394/1‑94 (MQ=60)
AGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAA < SRR4302533.5264783/94‑1 (MQ=60)
GCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGCTTCAGCAAC > SRR4302533.2637832/1‑94 (MQ=60)
GTTCTCACTTAACAGCAGACCTTTGCCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAG < SRR4302533.5687212/94‑1 (MQ=60)
GTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAG > SRR4302533.3813978/1‑94 (MQ=60)
TTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGG < SRR4302533.758157/94‑1 (MQ=60)
TTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGG < SRR4302533.342700/94‑1 (MQ=60)
TCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGC > SRR4302533.914140/1‑94 (MQ=60)
TCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAACAGGCAA > SRR4302533.2196972/1‑94 (MQ=60)
CACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAT < SRR4302533.4833083/94‑1 (MQ=60)
CACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAT > SRR4302533.481049/1‑94 (MQ=60)
CACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAT > SRR4302533.2890402/1‑94 (MQ=60)
CACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAT > SRR4302533.580567/1‑94 (MQ=60)
ACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATA > SRR4302533.5364041/1‑94 (MQ=60)
ACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATA < SRR4302533.4443019/94‑1 (MQ=60)
CTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAC < SRR4302533.3256492/94‑1 (MQ=60)
CTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAC < SRR4302533.2608422/94‑1 (MQ=60)
CTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAC > SRR4302533.3690885/1‑94 (MQ=60)
TAACAGCAGACCTTGACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCC < SRR4302533.2907522/94‑1 (MQ=60)
AACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCA < SRR4302533.768750/94‑1 (MQ=60)
AACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCA < SRR4302533.3656962/94‑1 (MQ=60)
AACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACAAGGCAATACACA > SRR4302533.5033641/1‑94 (MQ=60)
CAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGG > SRR4302533.2329033/1‑94 (MQ=60)
AGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGA < SRR4302533.1965335/94‑1 (MQ=60)
CAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAAC < SRR4302533.4916408/94‑1 (MQ=60)
AGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCCACCAGGCAATACTCAGGAACG > SRR4302533.1009985/1‑94 (MQ=60)
AGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACG > SRR4302533.2740843/1‑94 (MQ=60)
GACCTTTACCAGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGG < SRR4302533.3027426/94‑1 (MQ=60)
CCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCT > SRR4302533.5180697/1‑94 (MQ=60)
CCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCT > SRR4302533.6083546/1‑94 (MQ=60)
CTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTT > SRR4302533.2477019/1‑94 (MQ=60)
CTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTT < SRR4302533.1117030/94‑1 (MQ=60)
CTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTT < SRR4302533.5897039/94‑1 (MQ=60)
CTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATAGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTT > SRR4302533.4459799/1‑94 (MQ=60)
TTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTG > SRR4302533.2722103/1‑94 (MQ=60)
TTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTG < SRR4302533.2777498/94‑1 (MQ=60)
TTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTG < SRR4302533.4547691/94‑1 (MQ=60)
TTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTG > SRR4302533.4476265/1‑94 (MQ=60)
TACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGAC < SRR4302533.4242991/94‑1 (MQ=60)
TACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGAC < SRR4302533.5689554/94‑1 (MQ=60)
TACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGAC < SRR4302533.2985935/94‑1 (MQ=60)
ACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACG < SRR4302533.3507535/94‑1 (MQ=60)
CCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA > SRR4302533.2797753/1‑94 (MQ=60)
CCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA > SRR4302533.4143676/1‑94 (MQ=60)
CCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGA > SRR4302533.3241936/1‑94 (MQ=60)
TGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAAC < SRR4302533.61947/94‑1 (MQ=60)
CAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACAC > SRR4302533.1393464/1‑94 (MQ=60)
CAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACAC > SRR4302533.5886772/1‑94 (MQ=60)
CAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACAC > SRR4302533.3898991/1‑94 (MQ=60)
AAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACGCAGGAACGGCTTGACGAACACT > SRR4302533.1223294/1‑94 (MQ=60)
AAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGGTTCAACAACCAGGCAATACACAGGAACGGCTTGAagcacaat > SRR4302533.1379772/1‑86 (MQ=60)
AGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTT < SRR4302533.3643133/94‑1 (MQ=60)
GCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTG < SRR4302533.1915258/94‑1 (MQ=60)
GCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTG < SRR4302533.243887/94‑1 (MQ=60)
CGGGAAAGGACGGCCTGGATGCTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGT < SRR4302533.4389897/94‑1 (MQ=60)
CGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGT > SRR4302533.3109753/1‑94 (MQ=60)
GGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTC < SRR4302533.2970868/94‑1 (MQ=60)
GGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTC < SRR4302533.2450615/94‑1 (MQ=60)
GGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTC > SRR4302533.4421671/1‑94 (MQ=60)
GGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCA > SRR4302533.3731919/1‑94 (MQ=60)
GGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCA > SRR4302533.352146/1‑94 (MQ=60)
GAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCAT > SRR4302533.328810/1‑94 (MQ=60)
GAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCAT > SRR4302533.6130408/1‑94 (MQ=60)
AAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATAC < SRR4302533.2304281/94‑1 (MQ=60)
GGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTGATACAG < SRR4302533.1333427/94‑1 (MQ=60)
GGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG > SRR4302533.4328909/1‑94 (MQ=60)
GGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG > SRR4302533.2447620/1‑94 (MQ=60)
GGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG < SRR4302533.453620/94‑1 (MQ=60)
GGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAG < SRR4302533.4845000/94‑1 (MQ=60)
CGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGTCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAGCCA < SRR4302533.3406640/94‑1 (MQ=60)
|
CACGACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACAGCCA > NC_000913/2391255‑2391440
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
