Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,409,290 G→A A28V (GCG→GTG)  yfbS ← putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,409,2900GA99.7% 1144.7 / ‑5.7 324A28V (GCG→GTG) yfbSputative transport protein
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (176/147);  total (176/148)
Fisher's exact test for biased strand distribution p-value = 4.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.80e-01

Only 100 of 343 total aligned reads displayed.

ACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT  >  NC_000913/2409200‑2409379
                                                                                          |                                                                                         
  aaCGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATc                                                                                       <  2:8431803/93‑1 (MQ=255)
  aaCGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATc                                                                                       >  2:6395975/1‑93 (MQ=255)
  aaCGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATc                                                                                       >  1:615674/1‑93 (MQ=255)
   aCGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATcc                                                                                      >  2:8996055/1‑93 (MQ=255)
    cGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCa                                                                                     <  1:1283315/93‑1 (MQ=255)
    cGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCa                                                                                     <  2:5100847/93‑1 (MQ=255)
    cGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCa                                                                                     <  1:2152609/93‑1 (MQ=255)
     gTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCAt                                                                                    >  2:9425477/1‑93 (MQ=255)
      ttAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATa                                                                                   <  1:3642082/93‑1 (MQ=255)
      ttAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATa                                                                                   >  1:335958/1‑93 (MQ=255)
        aGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACCATAACAAACAAAGCGACCACATCCATACg                                                                                 >  1:2729538/1‑93 (MQ=255)
        aGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACg                                                                                 >  1:4303537/1‑93 (MQ=255)
           aTCAGAAAAGCTGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCAc                                                                              <  1:5456669/93‑1 (MQ=255)
             cAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCActc                                                                            <  1:38448/93‑1 (MQ=255)
              aGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCActct                                                                           <  1:4218169/93‑1 (MQ=255)
              aGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCActct                                                                           >  2:596541/1‑93 (MQ=255)
              aGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAACGACCACATCCATACGCActct                                                                           >  2:5766982/1‑93 (MQ=255)
               gAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTg                                                                          >  2:4633258/1‑93 (MQ=255)
                 aaaTCCGGAAAATCATTCGGGGACTGTCAGCGTTCCGCTTTATGCAAACGCGACAATAACAAACAAAGCGCACTCAACCATACGAACCCTGcc                                                                        <  2:6070381/93‑1 (MQ=255)
                  aaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGccc                                                                       <  1:879647/93‑1 (MQ=255)
                   aGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCg                                                                      >  1:2532159/1‑93 (MQ=255)
                    gCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGt                                                                     <  1:4053831/93‑1 (MQ=255)
                    gCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGt                                                                     <  1:1105374/93‑1 (MQ=255)
                      cGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCg                                                                   >  1:5935130/1‑93 (MQ=255)
                        gAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCa                                                                 >  1:628390/1‑93 (MQ=255)
                          aaaTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCaaa                                                               >  1:4719694/1‑93 (MQ=255)
                           aaTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAAc                                                              <  2:3990072/93‑1 (MQ=255)
                           aaTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAAc                                                              >  2:3223699/1‑93 (MQ=255)
                           aaTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAAc                                                              >  1:3065340/1‑93 (MQ=255)
                           aaTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAAc                                                              <  1:9316187/93‑1 (MQ=255)
                            aTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACa                                                             <  2:8207683/93‑1 (MQ=255)
                            aTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACa                                                             <  1:10030683/93‑1 (MQ=255)
                            aTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACa                                                             <  1:9119062/93‑1 (MQ=255)
                             tACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACaa                                                            >  1:5615195/1‑93 (MQ=255)
                              aCTTCTGGGACTGTCAGCGTTCCGCTTAATGCAGACGCGACAATAACAAACAAACCGACCACATCCGTACGCACTCTGCACGTCGCAAACAAg                                                           >  2:2132384/1‑93 (MQ=255)
                              aCTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAg                                                           >  1:4429265/1‑93 (MQ=255)
                              aCTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAg                                                           >  1:950912/1‑93 (MQ=255)
                               cTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGa                                                          <  1:8429514/93‑1 (MQ=255)
                                  cTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGa                                                       <  2:1020253/93‑1 (MQ=255)
                                  cTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGa                                                       <  2:2972554/93‑1 (MQ=255)
                                  cTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGa                                                       <  1:3258635/93‑1 (MQ=255)
                                  cTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGa                                                       <  2:7044103/93‑1 (MQ=255)
                                   tGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAt                                                      <  2:2380462/93‑1 (MQ=255)
                                   tGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAt                                                      <  2:504332/93‑1 (MQ=255)
                                   tGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAt                                                      >  2:9343656/1‑93 (MQ=255)
                                   tGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAt                                                      >  2:5518102/1‑93 (MQ=255)
                                    gggACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATg                                                     <  1:6887237/93‑1 (MQ=255)
                                     ggACTGTCAGCATTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATgg                                                    <  1:8302531/93‑1 (MQ=255)
                                      gACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGc                                                   <  2:4843530/93‑1 (MQ=255)
                                      gACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAACCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGc                                                   >  1:1092289/1‑93 (MQ=255)
                                       accgTCAGCGCTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCAAATCCATACGCACTCTGCCCGTCGCCAACGAGACGATGGCa                                                  >  2:4773006/4‑93 (MQ=255)
                                       aCTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCa                                                  >  1:1735596/1‑93 (MQ=255)
                                         tGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAc                                                >  2:9504801/1‑93 (MQ=255)
                                         tGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAc                                                >  2:5354699/1‑93 (MQ=255)
                                         tGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAc                                                >  2:9214056/1‑93 (MQ=255)
                                          gTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACg                                               >  1:35789/1‑93 (MQ=255)
                                             aGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGcc                                            >  2:2609781/1‑93 (MQ=255)
                                             aGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGcc                                            >  2:905912/1‑93 (MQ=255)
                                              gCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCa                                           <  2:2263751/93‑1 (MQ=255)
                                               cGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAg                                          <  1:2282703/93‑1 (MQ=255)
                                                gTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGt                                         <  1:7528239/93‑1 (MQ=255)
                                                 ttCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTa                                        >  2:6605493/1‑93 (MQ=255)
                                                 ttCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCACAAACAAGACGATGGCAACGGCCAGTa                                        >  2:1636489/1‑93 (MQ=255)
                                                  tCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTaa                                       >  2:4330007/1‑93 (MQ=255)
                                                  tCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTaa                                       <  2:1923170/93‑1 (MQ=255)
                                                     cgttAATGCAAACGCGACAAAAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGa                                    <  1:8648554/91‑1 (MQ=255)
                                                       ttAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGaaa                                  >  1:4824478/1‑93 (MQ=255)
                                                         aaTGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGa                                >  1:1991072/1‑93 (MQ=255)
                                                          aTGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGaa                               <  1:6658251/93‑1 (MQ=255)
                                                          aTGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGaa                               >  2:6212754/1‑93 (MQ=255)
                                                          aTGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGaa                               <  1:7278212/93‑1 (MQ=255)
                                                           tGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAc                              >  2:3582960/1‑93 (MQ=255)
                                                           tGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAc                              <  2:3822854/93‑1 (MQ=255)
                                                           ggaaaaGGCGACAATAACAAACAAAGCGACGCCATCCATACGCTCTCTCCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAc                              <  2:4536026/90‑1 (MQ=255)
                                                            gCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAcc                             <  1:5314616/93‑1 (MQ=255)
                                                             cAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAccc                            >  1:2939838/1‑93 (MQ=255)
                                                               aaCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCaa                          >  2:1988458/1‑93 (MQ=255)
                                                                aCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCaaa                         >  1:3488835/1‑93 (MQ=255)
                                                                  gcgACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATc                       >  1:9926371/1‑93 (MQ=255)
                                                                  gcgACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATc                       <  1:549365/93‑1 (MQ=255)
                                                                    gACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCaa                     >  2:1176285/1‑93 (MQ=255)
                                                                    gACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACACAAATCaa                     >  2:154095/1‑93 (MQ=255)
                                                                     aCAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAAt                    >  2:3312043/1‑93 (MQ=255)
                                                                      cAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAAtt                   <  2:6854048/93‑1 (MQ=255)
                                                                       aaTAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAGCCCAAATCAATTc                  <  1:6360544/93‑1 (MQ=255)
                                                                        aTAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCa                 <  1:1308101/93‑1 (MQ=255)
                                                                        aTAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCa                 >  1:2356684/1‑93 (MQ=255)
                                                                         tAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAc                >  2:643403/1‑93 (MQ=255)
                                                                         tAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAc                >  1:1370008/1‑93 (MQ=255)
                                                                          aacaaacaAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAcc               >  2:1308571/1‑93 (MQ=255)
                                                                            caaacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCCAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGt             >  2:5483621/1‑93 (MQ=255)
                                                                            caaacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGt             >  2:9641845/1‑93 (MQ=255)
                                                                            caaacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGt             <  1:1444435/93‑1 (MQ=255)
                                                                              aacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTc           >  1:9806103/1‑93 (MQ=255)
                                                                               acaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTca          <  1:7696998/93‑1 (MQ=255)
                                                                               acaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTca          >  2:7931601/1‑93 (MQ=255)
                                                                               acaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTca          <  2:7774909/93‑1 (MQ=255)
                                                                                caaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTcac         <  2:859822/93‑1 (MQ=255)
                                                                                  aaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACaa       >  1:8152009/1‑93 (MQ=255)
                                                                                   aGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTAACCGTTCACAAc      >  2:8894774/1‑93 (MQ=255)
                                                                                          |                                                                                         
ACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT  >  NC_000913/2409200‑2409379

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCTT  >  NC_000913/2409197‑2409383
                                                                                             |                                                                                             
AGGACAACGTTAGGATCAGACAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCA                                                                                               >  SRR4302540.8270622/1‑94 (MQ=60)
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCA                                                                                               >  SRR4302540.8270623/1‑94 (MQ=60)
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCA                                                                                               >  SRR4302540.1528229/1‑94 (MQ=60)
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCA                                                                                               <  SRR4302540.151683/94‑1 (MQ=60)
 TGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCAC                                                                                              >  SRR4302540.9178799/1‑94 (MQ=60)
 GGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCAC                                                                                              >  SRR4302540.7688709/1‑94 (MQ=60)
 GGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCAC                                                                                              >  SRR4302540.8167108/1‑94 (MQ=60)
 GGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCAC                                                                                              >  SRR4302540.1586809/1‑94 (MQ=60)
 GGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCAC                                                                                              <  SRR4302540.3586200/94‑1 (MQ=60)
   ACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACAT                                                                                            <  SRR4302540.8602317/94‑1 (MQ=60)
    CAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATC                                                                                           >  SRR4302540.622244/1‑94 (MQ=60)
    CAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATC                                                                                           <  SRR4302540.9814008/94‑1 (MQ=60)
     AACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCC                                                                                          >  SRR4302540.6257202/1‑94 (MQ=60)
     AACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCC                                                                                          <  SRR4302540.6334878/94‑1 (MQ=60)
     AACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCC                                                                                          >  SRR4302540.6214597/1‑94 (MQ=60)
     AACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCC                                                                                          >  SRR4302540.7979857/1‑94 (MQ=60)
      ACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAACCGCGACAATAACAAACAAAGCGACCACATCCA                                                                                         <  SRR4302540.5692518/94‑1 (MQ=60)
       CGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCAT                                                                                        <  SRR4302540.2175764/94‑1 (MQ=60)
       CGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCAT                                                                                        <  SRR4302540.1296544/94‑1 (MQ=60)
       CGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCAT                                                                                        <  SRR4302540.1311320/94‑1 (MQ=60)
       CGTTAGGATCAGAAAAGCAGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCAT                                                                                        <  SRR4302540.1296543/94‑1 (MQ=60)
        GTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATA                                                                                       >  SRR4302540.339340/1‑94 (MQ=60)
        GTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATA                                                                                       >  SRR4302540.3657107/1‑94 (MQ=60)
        GTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATA                                                                                       >  SRR4302540.1130361/1‑94 (MQ=60)
        GTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATA                                                                                       >  SRR4302540.1130363/1‑94 (MQ=60)
         TTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAC                                                                                      <  SRR4302540.2406610/94‑1 (MQ=60)
         TTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAC                                                                                      <  SRR4302540.3681970/94‑1 (MQ=60)
         TTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAC                                                                                      >  SRR4302540.8886679/1‑94 (MQ=60)
         TTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAC                                                                                      <  SRR4302540.3390617/94‑1 (MQ=60)
          TAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACCATAACAAACAAAGCGACCACATCCATACG                                                                                     >  SRR4302540.2758987/1‑94 (MQ=60)
          TAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACG                                                                                     >  SRR4302540.5008576/1‑94 (MQ=60)
          TAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACG                                                                                     >  SRR4302540.9387238/1‑94 (MQ=60)
          TAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACG                                                                                     >  SRR4302540.4350376/1‑94 (MQ=60)
          TAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACG                                                                                     >  SRR4302540.3862532/1‑94 (MQ=60)
          TAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACG                                                                                     >  SRR4302540.3862533/1‑94 (MQ=60)
            GGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCA                                                                                   >  SRR4302540.1364663/1‑94 (MQ=60)
            GGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCA                                                                                   >  SRR4302540.4283669/1‑94 (MQ=60)
             GATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCAC                                                                                  <  SRR4302540.2125710/94‑1 (MQ=60)
              ATCAGAAAAGCTGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACT                                                                                 <  SRR4302540.5516731/94‑1 (MQ=60)
              ATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACT                                                                                 <  SRR4302540.5516730/94‑1 (MQ=60)
              ATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACT                                                                                 >  SRR4302540.6825201/1‑94 (MQ=60)
               TCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTC                                                                                <  SRR4302540.4253794/94‑1 (MQ=60)
               TCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTC                                                                                <  SRR4302540.9621699/94‑1 (MQ=60)
               TCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTC                                                                                >  SRR4302540.553201/1‑94 (MQ=60)
                CAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCT                                                                               >  SRR4302540.3503850/1‑94 (MQ=60)
                CAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCT                                                                               <  SRR4302540.38843/94‑1 (MQ=60)
                 AGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTG                                                                              >  SRR4302540.2259124/1‑94 (MQ=60)
                 AGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTG                                                                              <  SRR4302540.4264090/94‑1 (MQ=60)
                  GAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGC                                                                             <  SRR4302540.3545692/94‑1 (MQ=60)
                   AAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCC                                                                            <  SRR4302540.8880100/94‑1 (MQ=60)
                   AAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCC                                                                            <  SRR4302540.4620426/94‑1 (MQ=60)
                     AAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCG                                                                          >  SRR4302540.2559478/1‑94 (MQ=60)
                     AAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCG                                                                          <  SRR4302540.888978/94‑1 (MQ=60)
                      AGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGT                                                                         >  SRR4302540.8751341/1‑94 (MQ=60)
                      AGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGT                                                                         <  SRR4302540.6488163/94‑1 (MQ=60)
                       GCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTC                                                                        <  SRR4302540.2851698/94‑1 (MQ=60)
                       GCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTC                                                                        <  SRR4302540.4097538/94‑1 (MQ=60)
                       GCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTC                                                                        >  SRR4302540.1660248/1‑94 (MQ=60)
                       GCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTC                                                                        >  SRR4302540.1432985/1‑94 (MQ=60)
                       GCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTC                                                                        <  SRR4302540.1116777/94‑1 (MQ=60)
                       GCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTC                                                                        <  SRR4302540.1116775/94‑1 (MQ=60)
                        CCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCG                                                                       <  SRR4302540.7066589/94‑1 (MQ=60)
                        CCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCG                                                                       >  SRR4302540.6000733/1‑94 (MQ=60)
                         CGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGC                                                                      >  SRR4302540.2296283/1‑94 (MQ=60)
                         CGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGC                                                                      >  SRR4302540.8288736/1‑94 (MQ=60)
                          GGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCA                                                                     >  SRR4302540.635078/1‑94 (MQ=60)
                          GGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCA                                                                     >  SRR4302540.9159851/1‑94 (MQ=60)
                          GGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCA                                                                     <  SRR4302540.677912/94‑1 (MQ=60)
                            AAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAA                                                                   >  SRR4302540.4770107/1‑94 (MQ=60)
                            AAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAA                                                                   >  SRR4302540.4770108/1‑94 (MQ=60)
                             AAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAAC                                                                  >  SRR4302540.5407921/1‑94 (MQ=60)
                             AAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAAC                                                                  >  SRR4302540.3098970/1‑94 (MQ=60)
                              AATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACA                                                                 <  SRR4302540.6676732/94‑1 (MQ=60)
                              AATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACA                                                                 <  SRR4302540.9427364/94‑1 (MQ=60)
                              AATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACA                                                                 <  SRR4302540.8269217/94‑1 (MQ=60)
                               ATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCACACAA                                                                >  SRR4302540.4835070/1‑94 (MQ=60)
                               ATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAA                                                                >  SRR4302540.5676971/1‑94 (MQ=60)
                               ATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAA                                                                >  SRR4302540.3082041/1‑94 (MQ=60)
                               ATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAA                                                                <  SRR4302540.9228672/94‑1 (MQ=60)
                               ATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAA                                                                <  SRR4302540.10147366/94‑1 (MQ=60)
                               ATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAA                                                                >  SRR4302540.1873247/1‑94 (MQ=60)
                                TACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAG                                                               <  SRR4302540.301746/94‑1 (MQ=60)
                                TACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAG                                                               >  SRR4302540.960795/1‑94 (MQ=60)
                                TACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAG                                                               >  SRR4302540.4477257/1‑94 (MQ=60)
                                 ACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGA                                                              >  SRR4302540.10030879/1‑94 (MQ=60)
                                  CTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGAC                                                             <  SRR4302540.8527374/94‑1 (MQ=60)
                                     CTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAT                                                          <  SRR4302540.3294170/94‑1 (MQ=60)
                                      TGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATG                                                         <  SRR4302540.3629926/94‑1 (MQ=60)
                                      TGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATG                                                         >  SRR4302540.2615161/1‑94 (MQ=60)
                                      TGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATG                                                         <  SRR4302540.7071682/94‑1 (MQ=60)
                                      TGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATG                                                         <  SRR4302540.1299569/94‑1 (MQ=60)
                                       GGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGG                                                        <  SRR4302540.6963590/94‑1 (MQ=60)
                                       GGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGG                                                        <  SRR4302540.9977862/94‑1 (MQ=60)
                                       GGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGACCGTGGCAAACAAGAGGATGG                                                        >  SRR4302540.3519619/1‑94 (MQ=60)
                                        ggactctacGCGTTCTGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCGGCCCGTCGCAAACAAGACGATGGC                                                       <  SRR4302540.6429184/85‑1 (MQ=60)
                                        GGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGC                                                       >  SRR4302540.1103505/1‑94 (MQ=60)
                                        GGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGC                                                       <  SRR4302540.3369673/94‑1 (MQ=60)
                                        GGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGC                                                       <  SRR4302540.4420634/94‑1 (MQ=60)
                                        GGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGC                                                       <  SRR4302540.8398936/94‑1 (MQ=60)
                                        GGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGC                                                       <  SRR4302540.6429185/94‑1 (MQ=60)
                                        GGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGC                                                       <  SRR4302540.6383213/94‑1 (MQ=60)
                                        GGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAACCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGC                                                       >  SRR4302540.1103504/1‑94 (MQ=60)
                                        GGACTGTCAGCATTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGC                                                       <  SRR4302540.8398935/94‑1 (MQ=60)
                                         GACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCA                                                      >  SRR4302540.1754333/1‑94 (MQ=60)
                                         GACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCA                                                      >  SRR4302540.5563412/1‑94 (MQ=60)
                                         GACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCA                                                      >  SRR4302540.4018314/1‑94 (MQ=60)
                                         GACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCA                                                      >  SRR4302540.3287944/1‑94 (MQ=60)
                                            TGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACG                                                   <  SRR4302540.7765701/94‑1 (MQ=60)
                                            TGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACG                                                   <  SRR4302540.2948168/94‑1 (MQ=60)
                                            TGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACG                                                   >  SRR4302540.36161/1‑94 (MQ=60)
                                              TCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGC                                                 >  SRR4302540.1509973/1‑94 (MQ=60)
                                               CAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCC                                                <  SRR4302540.48870/94‑1 (MQ=60)
                                               CAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCC                                                >  SRR4302540.9887223/1‑94 (MQ=60)
                                                AGCGTTCCTCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCA                                               <  SRR4302540.6046921/94‑1 (MQ=60)
                                                AGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCA                                               >  SRR4302540.1337956/1‑94 (MQ=60)
                                                AGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCA                                               >  SRR4302540.2056816/1‑94 (MQ=60)
                                                AGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCA                                               >  SRR4302540.7688119/1‑94 (MQ=60)
                                                 GCGTTCCGCTTAATGCAAACGCGACAATAACAAGCAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAG                                              <  SRR4302540.6141423/94‑1 (MQ=60)
                                                 GCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAG                                              <  SRR4302540.5099205/94‑1 (MQ=60)
                                                 GCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAG                                              <  SRR4302540.233982/94‑1 (MQ=60)
                                                 GCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAG                                              <  SRR4302540.4851870/94‑1 (MQ=60)
                                                  CGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGT                                             <  SRR4302540.825709/94‑1 (MQ=60)
                                                  CGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGT                                             <  SRR4302540.2307232/94‑1 (MQ=60)
                                                   GTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTA                                            <  SRR4302540.7612500/94‑1 (MQ=60)
                                                    TTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAA                                           >  SRR4302540.7753982/1‑94 (MQ=60)
                                                       CGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGA                                        >  SRR4302540.3607644/1‑94 (MQ=60)
                                                       CGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGA                                        >  SRR4302540.7195053/1‑94 (MQ=60)
                                                        cgTTAATGCAAACGCGACAAAAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAA                                       <  SRR4302540.8749019/92‑1 (MQ=60)
                                                         CTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAA                                      >  SRR4302540.4876140/1‑94 (MQ=60)
                                                         CTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAA                                      >  SRR4302540.172685/1‑94 (MQ=60)
                                                         CTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGCCCAGTAATGAAA                                      >  SRR4302540.2553506/1‑94 (MQ=60)
                                                         CTTAATGCAAACGCAACTATAACAAACAGAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAA                                      <  SRR4302540.9095448/94‑1 (MQ=60)
                                                          TTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAG                                     <  SRR4302540.9256413/94‑1 (MQ=60)
                                                          TTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAA                                     >  SRR4302540.7577500/1‑94 (MQ=60)
                                                           TAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGA                                    <  SRR4302540.2279700/94‑1 (MQ=60)
                                                           TAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGA                                    >  SRR4302540.2012650/1‑94 (MQ=60)
                                                            AATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAA                                   >  SRR4302540.7578624/1‑94 (MQ=60)
                                                            AATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAA                                   >  SRR4302540.3173309/1‑94 (MQ=60)
                                                             ATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAC                                  <  SRR4302540.6731874/94‑1 (MQ=60)
                                                             ATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAC                                  <  SRR4302540.7359418/94‑1 (MQ=60)
                                                              TGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACC                                 >  SRR4302540.1336531/1‑94 (MQ=60)
                                                              TGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACC                                 <  SRR4302540.4106472/94‑1 (MQ=60)
                                                               GCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCC                                <  SRR4302540.5372810/94‑1 (MQ=60)
                                                               GCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCC                                >  SRR4302540.2972118/1‑94 (MQ=60)
                                                               GCAAACGCGACAATAACAAACAAAGCGACCACACCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCC                                <  SRR4302540.9266474/94‑1 (MQ=60)
                                                                 AAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAA                              <  SRR4302540.1909939/94‑1 (MQ=60)
                                                                 AAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAA                              >  SRR4302540.5907583/1‑94 (MQ=60)
                                                                  AACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAA                             >  SRR4302540.3526830/1‑94 (MQ=60)
                                                                    CGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATC                           <  SRR4302540.8133200/94‑1 (MQ=60)
                                                                    CGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATC                           >  SRR4302540.10042256/1‑94 (MQ=60)
                                                                    CGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATC                           <  SRR4302540.4553228/94‑1 (MQ=60)
                                                                     GCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCA                          <  SRR4302540.144445/94‑1 (MQ=60)
                                                                     GCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCA                          <  SRR4302540.8482683/94‑1 (MQ=60)
                                                                     GCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCA                          <  SRR4302540.555349/94‑1 (MQ=60)
                                                                     GCGACAATAACAAACAAAGCGACCACAACCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCA                          <  SRR4302540.5606962/94‑1 (MQ=60)
                                                                      CGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAA                         >  SRR4302540.9740763/1‑94 (MQ=60)
                                                                      CGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAA                         >  SRR4302540.5545414/1‑94 (MQ=60)
                                                                          AATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAGCCCAAATCAATTCA                     <  SRR4302540.6431372/94‑1 (MQ=60)
                                                                          AATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCA                     >  SRR4302540.2382068/1‑94 (MQ=60)
                                                                          AATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCA                     <  SRR4302540.3318345/94‑1 (MQ=60)
                                                                          AATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCA                     >  SRR4302540.3603614/1‑94 (MQ=60)
                                                                           ATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAC                    <  SRR4302540.1321677/94‑1 (MQ=60)
                                                                           ATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAC                    >  SRR4302540.1384526/1‑94 (MQ=60)
                                                                            AAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACC                   <  SRR4302540.2406776/94‑1 (MQ=60)
                                                                             AACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCG                  <  SRR4302540.428776/94‑1 (MQ=60)
                                                                              ACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGT                 <  SRR4302540.4437116/94‑1 (MQ=60)
                                                                               CAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTT                <  SRR4302540.1460137/94‑1 (MQ=60)
                                                                               CAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTT                >  SRR4302540.4273832/1‑94 (MQ=60)
                                                                               CAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTT                <  SRR4302540.4000967/94‑1 (MQ=60)
                                                                                AAACAAAGCGACCACATCCATACGCCCTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTC               <  SRR4302540.5566209/94‑1 (MQ=60)
                                                                                AAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTC               >  SRR4302540.9920886/1‑94 (MQ=60)
                                                                                 AACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCA              <  SRR4302540.9507829/94‑1 (MQ=60)
                                                                                 AACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCA              >  SRR4302540.2710789/1‑94 (MQ=60)
                                                                                 AACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCA              >  SRR4302540.8563883/1‑94 (MQ=60)
                                                                                 AACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCA              <  SRR4302540.2347/94‑1 (MQ=60)
                                                                                  ACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCAC             <  SRR4302540.7784756/94‑1 (MQ=60)
                                                                                   CAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACA            >  SRR4302540.1084788/1‑94 (MQ=60)
                                                                                    AAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAA           >  SRR4302540.8246648/1‑94 (MQ=60)
                                                                                      AGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACT         <  SRR4302540.6383439/94‑1 (MQ=60)
                                                                                      AGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACT         <  SRR4302540.1088812/94‑1 (MQ=60)
                                                                                       GCGACCCCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTT        <  SRR4302540.3878308/94‑1 (MQ=60)
                                                                                         GACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT      >  SRR4302540.2812601/1‑94 (MQ=60)
                                                                                          ACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATC     >  SRR4302540.1235881/1‑94 (MQ=60)
                                                                                           CCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCC    <  SRR4302540.9319873/94‑1 (MQ=60)
                                                                                           CCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCC    >  SRR4302540.1403120/1‑94 (MQ=60)
                                                                                            CACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCT   <  SRR4302540.10104608/94‑1 (MQ=60)
                                                                                             ACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCTT  >  SRR4302540.3192547/1‑94 (MQ=60)
                                                                                             ACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCTT  >  SRR4302540.9886715/1‑94 (MQ=60)
                                                                                             ACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCTT  >  SRR4302540.690569/1‑94 (MQ=60)
                                                                                             |                                                                                             
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCTT  >  NC_000913/2409197‑2409383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑