Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,409,290 |
G→A |
A28V (GCG→GTG) |
yfbS ← |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,409,290 | 0 | G | A | 100.0%
| 813.8
/ NA
| 223 | A28V (GCG→GTG) | yfbS | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (132/91); total (132/91) |
Only 100 of 236 total aligned reads displayed.
ACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT > NC_000913/2409200‑2409379
|
aCAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACcaca > 2:1019213/1‑93 (MQ=255)
aCAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACcaca < 1:1841875/93‑1 (MQ=255)
cAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACAt > 1:2961530/1‑93 (MQ=255)
aaCGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATc > 1:198923/1‑93 (MQ=255)
gTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCAt > 2:5202628/1‑93 (MQ=255)
ttAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATa < 2:2286775/93‑1 (MQ=255)
ttAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATa > 1:810439/1‑93 (MQ=255)
tAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAc > 1:2366046/1‑93 (MQ=255)
aGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACg > 2:3904083/1‑93 (MQ=255)
aGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACg > 1:5127185/1‑93 (MQ=255)
aGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACg < 2:5167670/93‑1 (MQ=255)
tCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCAct > 2:425679/1‑93 (MQ=255)
gAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTg > 2:5956456/1‑93 (MQ=255)
gAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTg > 2:1508089/1‑93 (MQ=255)
aaaaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGc > 2:5750049/1‑93 (MQ=255)
aaaaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGc < 2:3495636/93‑1 (MQ=255)
aaaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGcc < 2:2814847/93‑1 (MQ=255)
aaaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGcc > 1:3431000/1‑93 (MQ=255)
aaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGccc > 2:5219514/1‑93 (MQ=255)
aaGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGccc < 1:5872574/93‑1 (MQ=255)
gCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGt > 2:1478938/1‑93 (MQ=255)
gAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCa > 1:2897980/1‑93 (MQ=255)
aaaaTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCaa < 2:1812169/93‑1 (MQ=255)
aaaTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCaaa < 1:5945140/93‑1 (MQ=255)
aTACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACa > 2:3776353/1‑93 (MQ=255)
aCTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAGCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAg < 2:2393401/93‑1 (MQ=255)
aCTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACaac < 2:4146591/93‑2 (MQ=255)
aCTTCTGCGACTATCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAg < 2:934858/93‑1 (MQ=255)
cTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGa > 2:209825/1‑93 (MQ=255)
ttCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGAc < 1:5636908/93‑1 (MQ=255)
tCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACg < 2:4810262/93‑1 (MQ=255)
tCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACg > 1:3728070/1‑93 (MQ=255)
tGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAt > 1:1302542/1‑93 (MQ=255)
tGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAt > 1:673329/1‑93 (MQ=255)
tGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAt < 1:5041834/93‑1 (MQ=255)
gggACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATg > 1:5332206/1‑93 (MQ=255)
gggACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATg < 2:6287267/93‑1 (MQ=255)
ggACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATgg > 2:2005516/1‑93 (MQ=255)
ggACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATgg > 1:4490939/1‑93 (MQ=255)
ggACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATgg > 1:3141292/1‑93 (MQ=255)
gACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGc > 2:5505994/1‑93 (MQ=255)
gACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGc > 1:3330328/1‑93 (MQ=255)
cTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGaaa > 2:2926231/1‑93 (MQ=255)
cTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCaa < 1:5002849/93‑1 (MQ=255)
tGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAc > 2:5772367/1‑93 (MQ=255)
tGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAc > 2:1737663/1‑93 (MQ=255)
gTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACg < 2:3531611/93‑1 (MQ=255)
cAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGc > 2:2196714/1‑93 (MQ=255)
gCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCa > 1:934565/1‑93 (MQ=255)
cGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAg < 1:3945404/93‑1 (MQ=255)
gTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGt > 2:858301/1‑93 (MQ=255)
gTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGt > 2:4987064/1‑93 (MQ=255)
ttCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTa > 2:3270225/1‑93 (MQ=255)
ccacTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCCCTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAAt < 2:2043553/90‑1 (MQ=255)
ccGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAAt < 2:5655017/93‑1 (MQ=255)
ccGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAAt < 1:5460176/93‑1 (MQ=255)
ttAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGaaa > 1:4670336/1‑93 (MQ=255)
tAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTGTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAg > 1:3610822/1‑93 (MQ=255)
tAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAg < 2:4871466/93‑1 (MQ=255)
tAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAg < 2:4466491/93‑1 (MQ=255)
aaTGCAAACGCGACAATAACAAACAAGGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGa < 1:3491135/93‑1 (MQ=255)
aaTGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGa < 1:5289030/93‑1 (MQ=255)
tGCAAACGCGACAATAACAAACAAAGCGGCCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAc < 2:5815446/93‑1 (MQ=255)
tGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAc < 2:4531524/93‑1 (MQ=255)
tGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAc > 1:4712344/1‑93 (MQ=255)
gCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAcc > 2:4830274/1‑93 (MQ=255)
aaaCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCa > 2:5826608/1‑93 (MQ=255)
aaaCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCa > 2:2560166/1‑93 (MQ=255)
aaCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCaa < 2:3831383/93‑1 (MQ=255)
aaCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCaa > 1:3062466/1‑93 (MQ=255)
aaCGCGACAATAACAAAAAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCaa < 2:3425933/93‑1 (MQ=255)
aCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCaaa < 2:560818/93‑1 (MQ=255)
aCGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCaaa < 1:4620085/93‑1 (MQ=255)
cgcgACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAAt < 1:4086007/93‑1 (MQ=255)
cgcgACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAAt < 1:2687276/93‑1 (MQ=255)
gcgACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATc > 1:4466109/1‑93 (MQ=255)
gACAATAACAAACAAAGCGACCACATCCATCCGCACTGTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCaa < 1:2180722/93‑1 (MQ=255)
aCAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGGAACGGCCAGTAATGAAAGAACCCAAATCAAt > 2:262990/1‑93 (MQ=255)
cAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAAtt < 1:5470691/93‑1 (MQ=255)
aTAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCa > 1:2964716/1‑93 (MQ=255)
tAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAc > 1:1728612/1‑93 (MQ=255)
tAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAc < 1:6133893/93‑1 (MQ=255)
aaacaaacaAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAc < 1:4445025/92‑1 (MQ=255)
aacaaacaAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAcc > 2:166405/1‑93 (MQ=255)
aaaaaacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAcc < 1:1559232/90‑1 (MQ=255)
acaaacaaAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCg > 2:1427230/1‑93 (MQ=255)
aaacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGtt < 2:621003/93‑1 (MQ=255)
aaacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGtt < 2:717125/93‑1 (MQ=255)
aacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTc < 2:5067147/93‑1 (MQ=255)
aacaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTc < 2:4716821/93‑1 (MQ=255)
acaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTca < 2:5121265/93‑1 (MQ=255)
acaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTca > 1:3199465/1‑93 (MQ=255)
acaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTca > 1:1712095/1‑93 (MQ=255)
acaaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTca > 1:1499865/1‑93 (MQ=255)
caaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTcac > 1:1033645/1‑93 (MQ=255)
aaaGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTcaca < 1:4365958/93‑1 (MQ=255)
gACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTa < 1:122212/93‑1 (MQ=255)
aCCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAt > 1:6179266/1‑93 (MQ=255)
aCCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAt > 1:4104526/1‑93 (MQ=255)
aCCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAt > 1:2299496/1‑93 (MQ=255)
|
ACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT > NC_000913/2409200‑2409379
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCTT > NC_000913/2409197‑2409383
|
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCA > SRR4302533.1422463/1‑94 (MQ=60)
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCA > SRR4302533.6318761/1‑94 (MQ=60)
GACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACA > SRR4302533.1158169/1‑94 (MQ=60)
ACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACAT > SRR4302533.2979633/1‑94 (MQ=60)
ACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACAT < SRR4302533.1853108/94‑1 (MQ=60)
CAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATC > SRR4302533.2678312/1‑94 (MQ=60)
CAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATC > SRR4302533.200181/1‑94 (MQ=60)
GTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATA > SRR4302533.815193/1‑94 (MQ=60)
GTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATA > SRR4302533.1356186/1‑94 (MQ=60)
TTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATAC > SRR4302533.2380681/1‑94 (MQ=60)
TAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACG > SRR4302533.5158159/1‑94 (MQ=60)
AGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGC < SRR4302533.1672916/94‑1 (MQ=60)
ATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTGATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACT > SRR4302533.4115093/1‑94 (MQ=60)
AAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCC > SRR4302533.3452195/1‑94 (MQ=60)
AAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCC > SRR4302533.688549/1‑94 (MQ=60)
AAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCG < SRR4302533.3638870/94‑1 (MQ=60)
AAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCG < SRR4302533.5908070/94‑1 (MQ=60)
AGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGT > SRR4302533.6193861/1‑94 (MQ=60)
AGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGT > SRR4302533.3885425/1‑94 (MQ=60)
CCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCG < SRR4302533.516783/94‑1 (MQ=60)
GGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCA > SRR4302533.3577112/1‑94 (MQ=60)
GGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCA > SRR4302533.2915792/1‑94 (MQ=60)
AAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAA > SRR4302533.298135/1‑94 (MQ=60)
AAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAAC < SRR4302533.5981093/94‑1 (MQ=60)
AAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAAC > SRR4302533.4180543/1‑94 (MQ=60)
AATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACTAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACA < SRR4302533.3395680/94‑1 (MQ=60)
AATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACA > SRR4302533.2291097/1‑94 (MQ=60)
ATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAA < SRR4302533.534209/94‑1 (MQ=60)
CTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGAC < SRR4302533.5125394/94‑1 (MQ=60)
CTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGAC > SRR4302533.2748423/1‑94 (MQ=60)
TTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACG > SRR4302533.3750939/1‑94 (MQ=60)
TTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACG < SRR4302533.5670992/94‑1 (MQ=60)
CTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAT > SRR4302533.1310373/1‑94 (MQ=60)
CTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAT > SRR4302533.677304/1‑94 (MQ=60)
CTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGAT < SRR4302533.5492043/94‑1 (MQ=60)
TGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATG > SRR4302533.5958139/1‑94 (MQ=60)
TGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATG < SRR4302533.1982320/94‑1 (MQ=60)
TGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATG < SRR4302533.5072348/94‑1 (MQ=60)
TGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATG > SRR4302533.5364163/1‑94 (MQ=60)
GGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGG > SRR4302533.4518138/1‑94 (MQ=60)
GGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGG > SRR4302533.3160605/1‑94 (MQ=60)
GGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGC > SRR4302533.3350914/1‑94 (MQ=60)
ACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAA > SRR4302533.5283148/1‑94 (MQ=60)
CTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAC < SRR4302533.1734476/94‑1 (MQ=60)
CTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAC < SRR4302533.5033172/94‑1 (MQ=60)
CTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAAC > SRR4302533.2564503/1‑94 (MQ=60)
TGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACG < SRR4302533.1732803/94‑1 (MQ=60)
TGTCAGCGTTCCGCTAAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACG < SRR4302533.4482007/94‑1 (MQ=60)
GTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGG > SRR4302533.3370016/1‑94 (MQ=60)
GTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGG > SRR4302533.6040540/1‑94 (MQ=60)
GTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGG > SRR4302533.873208/1‑94 (MQ=60)
GTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGG > SRR4302533.618622/1‑94 (MQ=60)
CAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCC < SRR4302533.4037802/94‑1 (MQ=60)
AGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCA > SRR4302533.940054/1‑94 (MQ=60)
AGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCA > SRR4302533.1554112/1‑94 (MQ=60)
GCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAG > SRR4302533.4632105/1‑94 (MQ=60)
GCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAG < SRR4302533.6236842/94‑1 (MQ=60)
GCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAG < SRR4302533.2089728/94‑1 (MQ=60)
GCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAG < SRR4302533.2328994/94‑1 (MQ=60)
CGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGT < SRR4302533.3969466/94‑1 (MQ=60)
GTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTA > SRR4302533.3113302/1‑94 (MQ=60)
GTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTA > SRR4302533.5050290/1‑94 (MQ=60)
GTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTA > SRR4302533.3167245/1‑94 (MQ=60)
GTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTA > SRR4302533.2130196/1‑94 (MQ=60)
TCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAAT > SRR4302533.956209/1‑94 (MQ=60)
CCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATG < SRR4302533.2964049/94‑1 (MQ=60)
CCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATG < SRR4302533.5493071/94‑1 (MQ=60)
CTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAA > SRR4302533.4698638/1‑94 (MQ=60)
CTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAA < SRR4302533.4674711/94‑1 (MQ=60)
CTTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAA > SRR4302533.4580922/1‑94 (MQ=60)
TTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTGTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAG > SRR4302533.3633046/1‑94 (MQ=60)
TTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAG < SRR4302533.130225/94‑1 (MQ=60)
TTAATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAG > SRR4302533.5861539/1‑94 (MQ=60)
AATGCAAACGCGACAATAACAAACAAGGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAA < SRR4302533.3512667/94‑1 (MQ=60)
AATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAA > SRR4302533.4510556/1‑94 (MQ=60)
AATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAA < SRR4302533.5320707/94‑1 (MQ=60)
ATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAC > SRR4302533.5625560/1‑94 (MQ=60)
ATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAC > SRR4302533.4740905/1‑94 (MQ=60)
ATGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAC > SRR4302533.4741140/1‑94 (MQ=60)
TGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACC > SRR4302533.4458172/1‑94 (MQ=60)
TGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACC < SRR4302533.1851155/94‑1 (MQ=60)
TGCAAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAAAC > SRR4302533.4458171/1‑94 (MQ=60)
AAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAA > SRR4302533.329202/1‑94 (MQ=60)
AAACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAA > SRR4302533.3081266/1‑94 (MQ=60)
ACGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAAT < SRR4302533.4648084/94‑1 (MQ=60)
CGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATC > SRR4302533.4493121/1‑94 (MQ=60)
CGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATC < SRR4302533.3742003/94‑1 (MQ=60)
CGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATC < SRR4302533.2703751/94‑1 (MQ=60)
CGCGACAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATC < SRR4302533.4110880/94‑1 (MQ=60)
GACAATAACAAACAAAGCGACCACATCCATCCGCACTGTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAAT < SRR4302533.2194168/94‑1 (MQ=60)
CAATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTC < SRR4302533.5503662/94‑1 (MQ=60)
AATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCA > SRR4302533.2982837/1‑94 (MQ=60)
AATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCA > SRR4302533.3471405/1‑94 (MQ=60)
AATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCA > SRR4302533.5832567/1‑94 (MQ=60)
ATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAC > SRR4302533.3157248/1‑94 (MQ=60)
ATAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCAC > SRR4302533.1739097/1‑94 (MQ=60)
TAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACC < SRR4302533.6170849/94‑1 (MQ=60)
AAACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACC < SRR4302533.4471909/94‑1 (MQ=60)
AACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCG < SRR4302533.2964570/94‑1 (MQ=60)
AAAAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCG < SRR4302533.1568619/94‑1 (MQ=60)
ACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGT > SRR4302533.1397440/1‑94 (MQ=60)
ACAAACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCACAATCAATTCACCGT > SRR4302533.5490216/1‑94 (MQ=60)
AACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCA > SRR4302533.1722471/1‑94 (MQ=60)
AACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCA > SRR4302533.1508908/1‑94 (MQ=60)
AACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCA > SRR4302533.3219155/1‑94 (MQ=60)
AACAAAGCGACCACACCCATACGCACTCGGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCA < SRR4302533.914001/94‑1 (MQ=60)
ACAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCAC > SRR4302533.1039725/1‑94 (MQ=60)
CAAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACA > SRR4302533.4733080/1‑94 (MQ=60)
AAAAGCGCCCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACA < SRR4302533.4088986/94‑1 (MQ=60)
AAAGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAA < SRR4302533.4392315/94‑1 (MQ=60)
AGCGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACT > SRR4302533.4994631/1‑94 (MQ=60)
CGACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTA > SRR4302533.5498209/1‑94 (MQ=60)
GACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT > SRR4302533.6216380/1‑94 (MQ=60)
GACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT > SRR4302533.2984898/1‑94 (MQ=60)
GACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT > SRR4302533.2313751/1‑94 (MQ=60)
GACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT > SRR4302533.4129491/1‑94 (MQ=60)
GACCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTAT < SRR4302533.122982/94‑1 (MQ=60)
CCACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCC > SRR4302533.4005685/1‑94 (MQ=60)
CACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCT < SRR4302533.2620665/94‑1 (MQ=60)
CACATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCT < SRR4302533.3026501/94‑1 (MQ=60)
CCATCCATACGCCCTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCTT < SRR4302533.6091660/94‑1 (MQ=60)
CCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCTT < SRR4302533.5296813/94‑1 (MQ=60)
|
AGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTCAGCGTTCCGCTTAATGCAAACGCGACAATAACAAACAAAGCGACCGCATCCATACGCACTCTGCCCGTCGCAAACAAGACGATGGCAACGGCCAGTAATGAAAGAACCCAAATCAATTCACCGTTCACAACTTATCCTT > NC_000913/2409197‑2409383
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
