Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,409,738 |
T→C |
A130A (GCA→GCG) |
yfbT ← |
putative phosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,409,738 | 0 | T | C | 100.0%
| 557.9
/ NA
| 172 | A130A (GCA→GCG) | yfbT | putative phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (85/87); total (85/87) |
Only 100 of 185 total aligned reads displayed.
GCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGTGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAA > NC_000913/2409649‑2409827
|
gcAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGcgcg < 1:5019194/93‑1 (MQ=255)
gcAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGcgcg < 2:4785365/93‑1 (MQ=255)
cAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCgg < 1:2355031/93‑1 (MQ=255)
aGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGa < 1:3006829/93‑1 (MQ=255)
gCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGaa < 1:7706710/93‑1 (MQ=255)
cccAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGc > 2:1244830/1‑93 (MQ=255)
cccAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGc > 2:3275411/1‑93 (MQ=255)
cccAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGc < 1:3748241/93‑1 (MQ=255)
ccAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGcc < 2:382611/93‑1 (MQ=255)
gcagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAg > 1:6435457/1‑93 (MQ=255)
cagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGc < 1:4905192/93‑1 (MQ=255)
cagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGc > 1:9763825/1‑93 (MQ=255)
cagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGc > 2:8645443/1‑93 (MQ=255)
cagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGc < 2:9791593/93‑1 (MQ=255)
gcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTa > 2:2825275/1‑93 (MQ=255)
gcgcgcCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTAttt < 2:2153816/93‑1 (MQ=255)
gcgcCTACCAGATGCGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGACCTCTAGCTATTTTa < 2:3235301/93‑1 (MQ=255)
gcgcCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTa < 1:5861760/93‑1 (MQ=255)
gcCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATg < 2:562505/93‑1 (MQ=255)
gcCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATg > 2:1788506/1‑93 (MQ=255)
ccTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATgg > 2:1644763/1‑93 (MQ=255)
ccTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATgg < 1:9555658/93‑1 (MQ=255)
cTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGgc > 1:8124585/1‑93 (MQ=255)
tAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGgcg > 1:1030986/1‑93 (MQ=255)
tAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGgcg > 1:4466511/1‑93 (MQ=255)
tAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGgcg > 2:5342798/1‑93 (MQ=255)
aCAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGgcgcg > 1:7751186/1‑93 (MQ=255)
cAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGgcgcgc < 1:4650394/93‑1 (MQ=255)
aGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACGCCTCTGGCGCGGGAAACCCAGCTATTTTATGGcgcgct < 1:8627009/93‑1 (MQ=255)
aGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGcgcgct < 1:7116225/93‑1 (MQ=255)
aGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGcgcgct < 2:604980/93‑1 (MQ=255)
aTACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGcgcgctcg < 1:3581709/93‑1 (MQ=255)
aTCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAc > 1:7257414/1‑93 (MQ=255)
aTCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAc > 2:6637825/1‑93 (MQ=255)
tCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAcc > 1:6392303/1‑93 (MQ=255)
tCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAcc < 1:7060437/93‑1 (MQ=255)
tCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAcc > 2:1979296/1‑93 (MQ=255)
tCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAcc < 2:6121392/93‑1 (MQ=255)
tCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAcc > 1:8376637/1‑93 (MQ=255)
aGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCgg < 2:7904058/93‑1 (MQ=255)
aGGTTCTGGTTTTCAGCGCTTCACTCGCTCAGCGGTTACAAAAAACTCTGGCGCGGGAAGCCCAGCTATTTTCTGGCGCGCTCGCGCTACCga > 2:8181894/1‑92 (MQ=255)
gTTCTTGTTGTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCa < 1:8218941/93‑1 (MQ=255)
gTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTATTTTATGGTGCGCTCGCGCTACCGGCa < 1:3790340/93‑1 (MQ=255)
gTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCa < 2:2463467/93‑1 (MQ=255)
tCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTCTGGCGCGCTCGCGCTACCGGCATg < 2:9650849/93‑1 (MQ=255)
cTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATgg < 1:9494774/93‑1 (MQ=255)
cTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATgg < 1:6323611/93‑1 (MQ=255)
cTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATgg > 2:1023083/1‑93 (MQ=255)
ggTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGac > 2:1654629/1‑92 (MQ=255)
ggTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAg < 2:6280213/93‑1 (MQ=255)
ggTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAg < 1:1441842/93‑1 (MQ=255)
gTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGc > 2:3909361/1‑93 (MQ=255)
gTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGc < 2:7329269/93‑1 (MQ=255)
gTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGc < 2:8606495/93‑1 (MQ=255)
tttCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCa > 2:7538075/1‑93 (MQ=255)
ttCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAg > 1:367729/1‑93 (MQ=255)
ttCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAg > 2:9348354/1‑93 (MQ=255)
taccGCGCTTCACTCGCTCAGCGGTTACAAGCGCCCCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAg < 1:7480647/91‑1 (MQ=255)
tCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGa > 2:7437477/1‑93 (MQ=255)
tCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGa < 1:6011038/93‑1 (MQ=255)
tCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGa < 2:5775730/93‑1 (MQ=255)
gcgcTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGt < 1:9748018/93‑1 (MQ=255)
gcgcTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGt < 1:6810368/93‑1 (MQ=255)
gcgcTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGt > 2:4792973/1‑93 (MQ=255)
gcTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTcc > 2:8692823/1‑92 (MQ=255)
gcTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTca < 1:1563260/93‑1 (MQ=255)
cTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTcac < 2:2822402/93‑1 (MQ=255)
tCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACaa < 1:4941487/93‑1 (MQ=255)
tCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACaa < 1:10019524/93‑1 (MQ=255)
tCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACaa > 2:8911198/1‑93 (MQ=255)
tCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACaa > 2:6877042/1‑93 (MQ=255)
cACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAAt < 1:3269538/93‑1 (MQ=255)
gCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGccc < 1:6837162/93‑1 (MQ=255)
cTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGCGCCAGAAGTCACAATGGCCCa > 1:8908453/1‑93 (MQ=255)
cTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCa > 2:4163894/1‑93 (MQ=255)
cTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCa < 1:4330265/93‑1 (MQ=255)
tCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAc < 1:1682815/93‑1 (MQ=255)
tCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAc > 1:2455339/1‑93 (MQ=255)
tCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAc > 1:9680733/1‑93 (MQ=255)
cAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACg < 2:8251402/93‑1 (MQ=255)
cAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACg < 1:7233896/93‑1 (MQ=255)
aGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACgg > 1:5222344/1‑93 (MQ=255)
aGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACgg > 1:7750412/1‑93 (MQ=255)
gCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGa > 1:8488022/1‑93 (MQ=255)
cGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGaa > 1:2163363/1‑93 (MQ=255)
gTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATa > 1:4144271/1‑93 (MQ=255)
gTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATa > 1:606322/1‑93 (MQ=255)
gTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATa < 2:1142100/93‑1 (MQ=255)
gTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGATAGAGCTACCGGCATGGAGCCAGAAGTCACAATGGCGCACGCAATa > 1:1002501/1‑93 (MQ=255)
ttACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATAc < 2:7268621/93‑1 (MQ=255)
ttACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATAc < 2:6251509/93‑1 (MQ=255)
ttACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATAc > 2:3747202/1‑93 (MQ=255)
ttACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATAc < 1:932477/93‑1 (MQ=255)
tACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATAcc < 2:9873979/93‑1 (MQ=255)
acacCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCtt > 1:5752698/1‑93 (MQ=255)
cccTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGATCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTa < 1:5338555/92‑1 (MQ=255)
ccTCTGGTGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAt < 1:6633882/93‑1 (MQ=255)
ctctGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAtt > 1:2094508/1‑93 (MQ=255)
tctGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTc > 2:1462445/1‑93 (MQ=255)
tGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCaa > 1:9989732/1‑93 (MQ=255)
|
GCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGTGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAA > NC_000913/2409649‑2409827
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGTGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAATGA > NC_000913/2409648‑2409831
|
CGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCG > SRR4302540.1009968/1‑94 (MQ=60)
GCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGG < SRR4302540.5073531/94‑1 (MQ=60)
CAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGG < SRR4302540.2380399/94‑1 (MQ=60)
AGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAA < SRR4302540.3039928/94‑1 (MQ=60)
GCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAG < SRR4302540.7795047/94‑1 (MQ=60)
GCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAG > SRR4302540.959405/1‑94 (MQ=60)
CCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCC < SRR4302540.3789139/94‑1 (MQ=60)
CCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCC < SRR4302540.3789140/94‑1 (MQ=60)
AGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAG > SRR4302540.6507090/1‑94 (MQ=60)
AGCAGCTGCGCGCCTAACAGACACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAG > SRR4302540.6506842/1‑94 (MQ=60)
GCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGC > SRR4302540.9878332/1‑94 (MQ=60)
CAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCT < SRR4302540.4957977/94‑1 (MQ=60)
GCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTAT < SRR4302540.882813/94‑1 (MQ=60)
GCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTAT < SRR4302540.5926581/94‑1 (MQ=60)
GCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTAT > SRR4302540.2480646/1‑94 (MQ=60)
CGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATG > SRR4302540.5691683/1‑94 (MQ=60)
GCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGG > SRR4302540.5352137/1‑94 (MQ=60)
GCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGG < SRR4302540.4870771/94‑1 (MQ=60)
CCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGC < SRR4302540.9668663/94‑1 (MQ=60)
CCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGC > SRR4302540.8218881/1‑94 (MQ=60)
CCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGC < SRR4302540.4302428/94‑1 (MQ=60)
CTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCG > SRR4302540.1041464/1‑94 (MQ=60)
CTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCG > SRR4302540.4514936/1‑94 (MQ=60)
CTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCG > SRR4302540.8280529/1‑94 (MQ=60)
CTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCG > SRR4302540.6929129/1‑94 (MQ=60)
TAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGC > SRR4302540.6088167/1‑94 (MQ=60)
AACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCG < SRR4302540.7190073/94‑1 (MQ=60)
AACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCG > SRR4302540.7841713/1‑94 (MQ=60)
CAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCT < SRR4302540.4700167/94‑1 (MQ=60)
AGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACGCCTCTGGCGCGGGAAACCCAGCTATTTTATGGCGCGCTC < SRR4302540.8727220/94‑1 (MQ=60)
AGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTC < SRR4302540.7195444/94‑1 (MQ=60)
ATACGCATCATGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGC < SRR4302540.3620826/94‑1 (MQ=60)
ATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGC < SRR4302540.3620824/94‑1 (MQ=60)
CGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCT < SRR4302540.4659564/94‑1 (MQ=60)
CATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAC > SRR4302540.7338394/1‑94 (MQ=60)
ATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACC > SRR4302540.6398323/1‑94 (MQ=60)
ATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACC > SRR4302540.6463461/1‑94 (MQ=60)
ATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACC > SRR4302540.8473837/1‑94 (MQ=60)
TCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCG < SRR4302540.7138957/94‑1 (MQ=60)
TCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCG > SRR4302540.846778/1‑94 (MQ=60)
AGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGC > SRR4302540.3590030/1‑94 (MQ=60)
GTTCTTGTTGTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCAT < SRR4302540.8314469/94‑1 (MQ=60)
GTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTATTTTATGGTGCGCTCGCGCTACCGGCAT < SRR4302540.3831664/94‑1 (MQ=60)
TTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATG > SRR4302540.9986652/1‑94 (MQ=60)
TCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGG > SRR4302540.982532/1‑94 (MQ=60)
CTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGA > SRR4302540.6742942/1‑94 (MQ=60)
CTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGA < SRR4302540.9607305/94‑1 (MQ=60)
CTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGA < SRR4302540.6394035/94‑1 (MQ=60)
GGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGC > SRR4302540.1973993/1‑94 (MQ=60)
GGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGC < SRR4302540.1457495/94‑1 (MQ=60)
GTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCC < SRR4302540.8038133/94‑1 (MQ=60)
TTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCA > SRR4302540.9679353/1‑94 (MQ=60)
TTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAG > SRR4302540.371518/1‑94 (MQ=60)
TTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGA < SRR4302540.7564139/94‑1 (MQ=60)
TACCGCGCTTCACTCGCTCAGCGGTTACAAGCGCCCCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGA < SRR4302540.7564138/94‑1 (MQ=60)
TCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAA < SRR4302540.6077696/94‑1 (MQ=60)
CCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAG < SRR4302540.7510551/94‑1 (MQ=60)
CCGCGCTTCACTCGCTCAGAGGTTACAAACACATCTGGCGCGGGAAGCCCCGCAATTTTACTGCGCGCTCGCGCTACCGGCATGGAGCCAGAAG > SRR4302540.5003140/1‑94 (MQ=60)
CGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGC > SRR4302540.6302471/1‑94 (MQ=60)
GCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTC < SRR4302540.9862415/94‑1 (MQ=60)
GCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTC < SRR4302540.6885727/94‑1 (MQ=60)
GCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCAC < SRR4302540.1580420/94‑1 (MQ=60)
TCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAAT < SRR4302540.10136136/94‑1 (MQ=60)
TCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAAT > SRR4302540.91443/1‑94 (MQ=60)
TCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAAT < SRR4302540.4994813/94‑1 (MQ=60)
TCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAAT < SRR4302540.1685719/94‑1 (MQ=60)
CACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATG < SRR4302540.3305221/94‑1 (MQ=60)
CACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATG > SRR4302540.7208252/1‑94 (MQ=60)
GCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGCGCCAGAAGTCACAATGGCCCA > SRR4302540.9011607/1‑94 (MQ=60)
GCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCA < SRR4302540.6912890/94‑1 (MQ=60)
GCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCA > SRR4302540.2606489/1‑94 (MQ=60)
CTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAG > SRR4302540.5039117/1‑94 (MQ=60)
CTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAC < SRR4302540.4377401/94‑1 (MQ=60)
CTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAC > SRR4302540.9794639/1‑94 (MQ=60)
CTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAC > SRR4302540.835950/1‑94 (MQ=60)
CTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAC > SRR4302540.2481763/1‑94 (MQ=60)
TCAGCGGTTACAACCCCCTCTGGCGCGGGAAGCACAGCTATTTTATGGCGCGCTCGCTCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACG < SRR4302540.5920138/94‑1 (MQ=60)
TCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACG < SRR4302540.1701083/94‑1 (MQ=60)
TCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACG > SRR4302540.4445564/1‑94 (MQ=60)
CAGCGGTTACAAACACCTCTTGCGCGGGAAGCCCAGCTCTTTTATGGCGCGCTCGCGCTACCGGCCTGGAGCCAGAAGTCCCAATGccacaccg > SRR4302540.7840926/1‑86 (MQ=60)
CAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGG > SRR4302540.7840925/1‑94 (MQ=60)
CAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGG > SRR4302540.5279285/1‑94 (MQ=60)
CAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGG < SRR4302540.7314582/94‑1 (MQ=60)
CAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGG < SRR4302540.7314588/94‑1 (MQ=60)
AGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGA > SRR4302540.8586636/1‑94 (MQ=60)
GCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAA > SRR4302540.2186665/1‑94 (MQ=60)
CGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAAT < SRR4302540.5106603/94‑1 (MQ=60)
GGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGGGCGCTCGCGCTACCGGCATGCAGAGAGAAGTCACAATGCCCCACGacatc > SRR4302540.6653700/1‑89 (MQ=60)
GGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATA > SRR4302540.4189120/1‑94 (MQ=60)
GGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATA > SRR4302540.1012684/1‑94 (MQ=60)
GGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATA > SRR4302540.612804/1‑94 (MQ=60)
GGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGATAGAGCTACCGGCATGGAGCCAGAAGTCACAATGGCGCACGCAATA > SRR4302540.1012683/1‑94 (MQ=60)
GTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATAC < SRR4302540.9452542/94‑1 (MQ=60)
TTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACC < SRR4302540.942270/94‑1 (MQ=60)
TACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCT < SRR4302540.1525962/94‑1 (MQ=60)
AACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTT < SRR4302540.1342425/94‑1 (MQ=60)
AACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTT > SRR4302540.5816190/1‑94 (MQ=60)
CACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTA < SRR4302540.4020101/94‑1 (MQ=60)
CACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTA < SRR4302540.2316779/94‑1 (MQ=60)
CCCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGATCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAT < SRR4302540.5397082/94‑1 (MQ=60)
ACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAT > SRR4302540.6691278/1‑94 (MQ=60)
CCTCTGGTGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATT < SRR4302540.6707302/94‑1 (MQ=60)
CCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATT > SRR4302540.2116999/1‑94 (MQ=60)
TCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCA > SRR4302540.3290688/1‑94 (MQ=60)
CTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAA > SRR4302540.10106170/1‑94 (MQ=60)
GCGCGGGAATCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAATG < SRR4302540.1865679/94‑1 (MQ=60)
GGCGGGAAGCCCAGCTATTTTATGGCTCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAATGA < SRR4302540.8787526/94‑1 (MQ=60)
CGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAATGA > SRR4302540.428507/1‑94 (MQ=60)
|
CGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGTGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAATGA > NC_000913/2409648‑2409831
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
