Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,409,738 |
T→C |
A130A (GCA→GCG) |
yfbT ← |
putative phosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,409,738 | 0 | T | C | 100.0%
| 585.3
/ NA
| 181 | A130A (GCA→GCG) | yfbT | putative phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (88/93); total (88/93) |
Only 100 of 188 total aligned reads displayed.
CGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGTGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAA > NC_000913/2409648‑2409827
|
cgcAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGgcgc < 2:3285556/93‑1 (MQ=255)
aGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGa > 1:1756846/1‑93 (MQ=255)
aGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGa > 1:4721000/1‑93 (MQ=255)
gCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGaa < 2:5251225/93‑1 (MQ=255)
ccccAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGTGGTTACAAACACCTCTGGCGCGGGAAg < 2:5958390/93‑1 (MQ=255)
ccccAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAg < 1:6281913/93‑1 (MQ=255)
cagcagCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGccc > 2:5175410/1‑93 (MQ=255)
agcagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCa < 2:5727483/93‑1 (MQ=255)
agcagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCa > 2:4904839/1‑93 (MQ=255)
agcagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCa < 2:1232255/93‑1 (MQ=255)
agcagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCa < 2:1628705/93‑1 (MQ=255)
agcagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCa < 2:5062112/93‑1 (MQ=255)
agcagcTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCa < 1:2710068/93‑1 (MQ=255)
tGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTAtt > 1:2191735/1‑93 (MQ=255)
tGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTAtt < 1:4529384/93‑1 (MQ=255)
gcgcgcCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTAttt > 2:2776542/1‑93 (MQ=255)
cgcgcCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTAtttt < 2:2504529/93‑1 (MQ=255)
cgcgcCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTAtttt < 2:536564/93‑1 (MQ=255)
ggtccTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTTACTCGCGCAGCGGTTACAAACTCCTCTGGCGCGGGAATCCCAGCTATTTTa < 2:3200903/90‑1 (MQ=255)
ccTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATgg > 1:3721579/1‑93 (MQ=255)
cTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGgc < 1:2593020/93‑1 (MQ=255)
aaCAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGgcgc < 2:745925/93‑1 (MQ=255)
aaCAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGgcgc > 1:1632478/1‑93 (MQ=255)
aCAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGgcgcg > 2:3916471/1‑93 (MQ=255)
aGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGcgcgct < 2:139108/93‑1 (MQ=255)
aGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGcgcgct < 1:5342705/93‑1 (MQ=255)
gATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGcgcgctc > 1:2311042/1‑93 (MQ=255)
gATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGcgcgctc > 1:583939/1‑93 (MQ=255)
cGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTTTTTTATGGcgcgctcgcgc < 2:6143908/93‑1 (MQ=255)
cGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGcgcgctcgcgc < 1:1549010/93‑1 (MQ=255)
gCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGcgcgctcgcgct < 2:4277777/93‑1 (MQ=255)
aTCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAc < 1:3494427/93‑1 (MQ=255)
aTCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAc < 1:2475383/93‑1 (MQ=255)
aTCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAc < 2:5883002/93‑1 (MQ=255)
tCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAcc > 2:4044804/1‑93 (MQ=255)
tCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAcc < 2:4212543/93‑1 (MQ=255)
tCAGGTTCTGGTTTTCCGCGCGTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGCAGCCCAGCTATTTTATGGCGCGCTCGCGCTAcc > 1:5193089/1‑93 (MQ=255)
cAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCg < 1:3572636/93‑1 (MQ=255)
aGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCgg > 2:2839659/1‑93 (MQ=255)
aGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCgg > 2:3325962/1‑93 (MQ=255)
aGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCgg < 2:3570563/93‑1 (MQ=255)
ggTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGc > 1:2942488/1‑93 (MQ=255)
ttCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCAt > 1:5291224/1‑93 (MQ=255)
tCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATg > 1:1837955/1‑93 (MQ=255)
cTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATgg > 1:1053866/1‑93 (MQ=255)
cTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATgg > 2:6300739/1‑93 (MQ=255)
tGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGa < 1:3119764/93‑1 (MQ=255)
tGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGa < 1:1032774/93‑1 (MQ=255)
tGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGa < 2:5981662/93‑1 (MQ=255)
tttCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCa < 2:3993391/93‑1 (MQ=255)
tCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGa < 1:3248112/93‑1 (MQ=255)
ccGCGCGTCGCTCGCTCAGCGGTTACAAACGCCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTGCCGGCATGGAGCCAGaa < 2:5940925/93‑1 (MQ=255)
gcgcTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGt < 2:5095353/93‑1 (MQ=255)
cTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTcac > 1:615618/1‑93 (MQ=255)
cTTCACTCGCTCAGCGGTTACAAACACCTCTGACGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTcac < 2:3678118/93‑1 (MQ=255)
ttCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTcaca < 2:2136783/93‑1 (MQ=255)
ttCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTcaca > 2:4366158/1‑93 (MQ=255)
tCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACaa < 2:6011718/93‑1 (MQ=255)
tCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACaa > 1:4305055/1‑93 (MQ=255)
tCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACaa > 2:2903420/1‑93 (MQ=255)
tCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACaa < 2:4586084/93‑1 (MQ=255)
tCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACaa > 1:631425/1‑93 (MQ=255)
cACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAAt < 2:3440726/93‑1 (MQ=255)
cACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAAt < 1:6030038/93‑1 (MQ=255)
cACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAAt < 2:5206518/93‑1 (MQ=255)
aCTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATg < 1:1181703/93‑1 (MQ=255)
aCTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATg > 2:1664799/1‑93 (MQ=255)
cTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATgg > 1:563449/1‑93 (MQ=255)
tCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGCAGTCACAATGGc > 1:2043878/1‑93 (MQ=255)
cGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGcc > 1:1268596/1‑93 (MQ=255)
cTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCa > 1:3665595/1‑93 (MQ=255)
tCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAc < 2:5375719/93‑1 (MQ=255)
tCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAc > 2:4778503/1‑93 (MQ=255)
tCAGCGCTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAc > 2:5240937/1‑93 (MQ=255)
cAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACg < 2:519647/93‑1 (MQ=255)
cAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACg > 2:922439/1‑93 (MQ=255)
aGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACgg > 1:605662/1‑93 (MQ=255)
aGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACgg > 1:2959643/1‑93 (MQ=255)
cGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGaa < 2:5144872/93‑1 (MQ=255)
ggTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAAt < 2:5799475/93‑1 (MQ=255)
gTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATa > 2:3669189/1‑93 (MQ=255)
tACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATAcc < 1:3836472/93‑1 (MQ=255)
tACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATAcc < 1:3983949/93‑1 (MQ=255)
aCAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCt < 2:2057141/93‑1 (MQ=255)
cAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTg < 1:1808839/93‑1 (MQ=255)
cAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTg < 1:5516184/93‑1 (MQ=255)
aaCACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCt > 1:3958492/1‑93 (MQ=255)
aaCACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCt > 1:4930004/1‑93 (MQ=255)
aaCACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCt < 1:4793446/93‑1 (MQ=255)
acacCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCtt > 2:2341104/1‑93 (MQ=255)
acCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTa < 1:4981820/93‑1 (MQ=255)
ccTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAt > 1:1348028/1‑93 (MQ=255)
ccTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAt < 2:4720409/93‑1 (MQ=255)
ccTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAt < 1:5964244/93‑1 (MQ=255)
ccTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAt > 2:156779/1‑93 (MQ=255)
ctctGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAtt > 1:5015881/1‑93 (MQ=255)
tctGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTc < 2:3034303/93‑1 (MQ=255)
ctGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCa > 2:6071823/1‑93 (MQ=255)
ctGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCa < 1:728762/93‑1 (MQ=255)
tGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCaa > 2:1014007/1‑93 (MQ=255)
|
CGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGTGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAA > NC_000913/2409648‑2409827
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGTGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAATGA > NC_000913/2409646‑2409831
|
GGCGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCG < SRR4302533.1393856/94‑1 (MQ=60)
GGCGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCG > SRR4302533.134353/1‑94 (MQ=60)
GGCGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCG < SRR4302533.6280727/94‑1 (MQ=60)
GCGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGC < SRR4302533.3963806/94‑1 (MQ=60)
GCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGG > SRR4302533.4424362/1‑94 (MQ=60)
CAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGG > SRR4302533.1520540/1‑94 (MQ=60)
AAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGA > SRR4302533.4749623/1‑94 (MQ=60)
AAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGA > SRR4302533.1767553/1‑94 (MQ=60)
AAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGA > SRR4302533.6132931/1‑94 (MQ=60)
AGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAA < SRR4302533.732985/94‑1 (MQ=60)
CCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGC < SRR4302533.6319405/94‑1 (MQ=60)
CCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCC > SRR4302533.5656355/1‑94 (MQ=60)
gccgcgcacccacccaacacctgttgttttttttgtttttccccccccttccCTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAG < SRR4302533.5793368/42‑1 (MQ=60)
AGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAG < SRR4302533.2726702/94‑1 (MQ=60)
AGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTA > SRR4302533.3780613/1‑94 (MQ=60)
CTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATT > SRR4302533.2205240/1‑94 (MQ=60)
TGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTT < SRR4302533.6287960/94‑1 (MQ=60)
TGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTT < SRR4302533.4556812/94‑1 (MQ=60)
TGCGCGCCCAACAGATACGCATCAGGTTCTGGGTTTCCGCGCGGCACTCGCGCAGCGGTTACAAACACCGCTGGCGCGGGAAGCCCAGCTATTA > SRR4302533.6341584/1‑94 (MQ=60)
CGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTA < SRR4302533.4888464/94‑1 (MQ=60)
GCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGG < SRR4302533.6009917/94‑1 (MQ=60)
GCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGG > SRR4302533.3744419/1‑94 (MQ=60)
CTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCG < SRR4302533.2608954/94‑1 (MQ=60)
CTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCG > SRR4302533.3248513/1‑94 (MQ=60)
TAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGC > SRR4302533.3066195/1‑94 (MQ=60)
TAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGC > SRR4302533.1642366/1‑94 (MQ=60)
ACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGC < SRR4302533.1265106/94‑1 (MQ=60)
AGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTC < SRR4302533.5374744/94‑1 (MQ=60)
AGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTC > SRR4302533.2325360/1‑94 (MQ=60)
AGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTC > SRR4302533.587383/1‑94 (MQ=60)
ATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGC < SRR4302533.5969326/94‑1 (MQ=60)
CGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCT > SRR4302533.1862810/1‑94 (MQ=60)
CGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCT < SRR4302533.1558348/94‑1 (MQ=60)
CATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTAC > SRR4302533.3633506/1‑94 (MQ=60)
ATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCATCTTTTTCAAACCCCTCTGGTGCGGGAACCCCAGCTATTTTATGGCGCGCTCGCGCTACC < SRR4302533.173199/94‑1 (MQ=60)
ATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACC < SRR4302533.2490650/94‑1 (MQ=60)
ATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACC > SRR4302533.2408188/1‑94 (MQ=60)
ATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACC < SRR4302533.3515981/94‑1 (MQ=60)
ATCAGGTTCTGGTTTTCCGCGCGTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGCAGCCCAGCTATTTTATGGCGCGCTCGCGCTACC > SRR4302533.5224411/1‑94 (MQ=60)
CAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGG < SRR4302533.3594649/94‑1 (MQ=60)
AGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGC > SRR4302533.2960454/1‑94 (MQ=60)
GGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCA < SRR4302533.5306866/94‑1 (MQ=60)
GGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCA > SRR4302533.4252138/1‑94 (MQ=60)
GTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCAT > SRR4302533.5322906/1‑94 (MQ=60)
TTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATG < SRR4302533.1080303/94‑1 (MQ=60)
TTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATG > SRR4302533.1849164/1‑94 (MQ=60)
TCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGG > SRR4302533.1060072/1‑94 (MQ=60)
TGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAG < SRR4302533.3138949/94‑1 (MQ=60)
TGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAG < SRR4302533.1038847/94‑1 (MQ=60)
TTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAG > SRR4302533.1771714/1‑94 (MQ=60)
TCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAA < SRR4302533.3268141/94‑1 (MQ=60)
TCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAA < SRR4302533.1670013/94‑1 (MQ=60)
CGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGT > SRR4302533.4700067/1‑94 (MQ=60)
CGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGT < SRR4302533.1576012/94‑1 (MQ=60)
GCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCAC > SRR4302533.2247868/1‑94 (MQ=60)
GCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCAC > SRR4302533.2118276/1‑94 (MQ=60)
GCTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCAC > SRR4302533.619233/1‑94 (MQ=60)
CTTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACA > SRR4302533.5436593/1‑94 (MQ=60)
TTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAA > SRR4302533.4330957/1‑94 (MQ=60)
TTCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAA > SRR4302533.635140/1‑94 (MQ=60)
TCACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAAT > SRR4302533.4987483/1‑94 (MQ=60)
CACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATG < SRR4302533.6066584/94‑1 (MQ=60)
ACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAATCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGG < SRR4302533.1188803/94‑1 (MQ=60)
ACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGG > SRR4302533.566788/1‑94 (MQ=60)
ACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGG > SRR4302533.2670063/1‑94 (MQ=60)
ACTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGG > SRR4302533.2796322/1‑94 (MQ=60)
CTCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGCAGTCACAATGGC > SRR4302533.2056478/1‑94 (MQ=60)
TCGCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCC > SRR4302533.1276189/1‑94 (MQ=60)
GCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCA > SRR4302533.3688128/1‑94 (MQ=60)
GCTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCA < SRR4302533.3879175/94‑1 (MQ=60)
CTCAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTACGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCAC < SRR4302533.3335338/94‑1 (MQ=60)
CAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGG > SRR4302533.609220/1‑94 (MQ=60)
CAGCGGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGG > SRR4302533.2977733/1‑94 (MQ=60)
GGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATA < SRR4302533.5354427/94‑1 (MQ=60)
GGTTACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATA > SRR4302533.5013758/1‑94 (MQ=60)
TACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCT < SRR4302533.1348391/94‑1 (MQ=60)
TACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCT < SRR4302533.4008207/94‑1 (MQ=60)
TACAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCT < SRR4302533.3859913/94‑1 (MQ=60)
CAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGC < SRR4302533.5549487/94‑1 (MQ=60)
CAAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGC < SRR4302533.1819844/94‑1 (MQ=60)
AAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCT > SRR4302533.4959859/1‑94 (MQ=60)
AAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCT > SRR4302533.3982616/1‑94 (MQ=60)
AAACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCT < SRR4302533.370631/94‑1 (MQ=60)
AACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTT < SRR4302533.4822486/94‑1 (MQ=60)
ACACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTT > SRR4302533.4750285/1‑94 (MQ=60)
ACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAT < SRR4302533.5012023/94‑1 (MQ=60)
ACCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAT > SRR4302533.1356141/1‑94 (MQ=60)
ACCTCTGGCGCGGCAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTAT > SRR4302533.3571280/1‑94 (MQ=60)
CCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATT > SRR4302533.5046269/1‑94 (MQ=60)
CCTCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATT < SRR4302533.6000332/94‑1 (MQ=60)
TCTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCA > SRR4302533.2556531/1‑94 (MQ=60)
CTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAA > SRR4302533.5782914/1‑94 (MQ=60)
CTGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAA < SRR4302533.733065/94‑1 (MQ=60)
TGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAA > SRR4302533.3291111/1‑94 (MQ=60)
TGGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAA < SRR4302533.847091/94‑1 (MQ=60)
GGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAAT < SRR4302533.2653467/94‑1 (MQ=60)
GGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAAT < SRR4302533.5094118/94‑1 (MQ=60)
GGCGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAAT > SRR4302533.3304631/1‑94 (MQ=60)
CGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAATGA < SRR4302533.5961476/94‑1 (MQ=60)
CGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAATGA > SRR4302533.1234000/1‑94 (MQ=60)
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GGCGCAAGCCCCAGCAGCTGCGCGCCTAACAGATACGCATCAGGTTCTGGTTTTCCGCGCTTCACTCGCTCAGCGGTTACAAACACCTCTGGTGCGGGAAGCCCAGCTATTTTATGGCGCGCTCGCGCTACCGGCATGGAGCCAGAAGTCACAATGGCCCACGGAATACCTGCTTTATTCAAATGA > NC_000913/2409646‑2409831
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
