Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,458,272 |
(G)5→4 |
coding (218/1311 nt) |
b2342 ← |
putative acyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,458,268 | 0 | G | . | 100.0%
| 1283.0
/ NA
| 281 | coding (222/1311 nt) | b2342 | putative acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (157/124); total (157/124) |
Only 100 of 310 total aligned reads displayed.
GCCTGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTA > NC_000913/2458176‑2458356
|
gCCTGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTg < 2:568410/93‑1 (MQ=255)
gAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTggggct > 2:2184771/1‑91 (MQ=255)
gAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTggggct > 1:8763282/1‑91 (MQ=255)
aaCTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTggggcttc < 2:5052398/93‑5 (MQ=255)
aaCTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTggggcttc < 2:9161664/93‑5 (MQ=255)
aCTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCa > 2:464815/1‑93 (MQ=255)
aCTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCa < 2:1414586/93‑1 (MQ=255)
aCTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCa > 2:8587233/1‑93 (MQ=255)
cTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAg < 1:5436487/93‑1 (MQ=255)
cTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAg > 2:2089020/1‑93 (MQ=255)
tGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAgg < 2:4762079/93‑1 (MQ=255)
gTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCa < 1:8137230/93‑1 (MQ=255)
gTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCa > 1:4282592/1‑93 (MQ=255)
aGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGCT‑GGGGCTTCAGGTAtt > 1:9276806/1‑93 (MQ=255)
cgcAAGCGCGGCTGACGCTGTAAGCATCGGTTTGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTg < 2:4502111/93‑1 (MQ=255)
cAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTa < 1:7172802/93‑1 (MQ=255)
cAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTa < 1:513478/93‑1 (MQ=255)
cAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTa < 2:5590239/93‑1 (MQ=255)
aaGCGCGACTGACGCTATAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTAc < 1:8961992/93‑1 (MQ=255)
aGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACg > 1:3438352/1‑93 (MQ=255)
gcgcGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGa > 1:205492/1‑93 (MQ=255)
cgcgGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGAc < 2:7071999/93‑1 (MQ=255)
gcgGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGAcc < 1:5813608/93‑1 (MQ=255)
gcgGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGAcc < 2:261595/93‑1 (MQ=255)
cgGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCt > 1:9897451/1‑93 (MQ=255)
cgGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCt > 2:4293229/1‑93 (MQ=255)
cgGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCt > 2:7923605/1‑93 (MQ=255)
cgGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCt > 2:3581122/1‑93 (MQ=255)
gCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGa < 1:7025341/93‑1 (MQ=255)
tGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGAcc > 1:7746163/1‑93 (MQ=255)
tGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGAcc > 1:3066166/1‑93 (MQ=255)
gACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCa < 2:9517783/93‑1 (MQ=255)
gACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCa > 2:3010020/1‑93 (MQ=255)
gACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCa > 2:8996555/1‑93 (MQ=255)
aCGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCaa < 1:1415765/93‑1 (MQ=255)
cGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCaaa < 2:2532154/93‑1 (MQ=255)
gCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAg > 1:3796851/1‑93 (MQ=255)
gTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAcc < 2:9344483/93‑1 (MQ=255)
tAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCa > 2:7038615/1‑93 (MQ=255)
tAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCa > 1:7480585/1‑93 (MQ=255)
tAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAACACCa > 1:4191032/1‑93 (MQ=255)
gCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAgtt > 2:521398/1‑93 (MQ=255)
acGGTATGTACATTCATTCCCGTACCGAGAACAATCGCACGCGCAATGTT‑GGGGTTTCAGGCATTTGTACGACCTGACCAAAGACCAgttgtt < 1:6808434/92‑1 (MQ=255)
cGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTc < 1:4590329/93‑1 (MQ=255)
cGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTc < 1:9856144/93‑1 (MQ=255)
ggTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCa < 2:8069198/93‑1 (MQ=255)
ggTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCa > 1:1450874/1‑93 (MQ=255)
gTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCaa > 2:4125029/1‑93 (MQ=255)
gTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCaa > 2:6506711/1‑93 (MQ=255)
gTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCaa > 2:3316710/1‑93 (MQ=255)
gTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCaa > 2:10246/1‑93 (MQ=255)
tATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAAt < 1:4864081/93‑1 (MQ=255)
aTGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATc > 2:7433158/1‑93 (MQ=255)
tGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCa > 1:3990605/1‑93 (MQ=255)
tGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCa > 2:4669374/1‑93 (MQ=255)
tGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCa > 2:5417263/1‑93 (MQ=255)
tGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCa > 1:6706796/1‑93 (MQ=255)
gTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCAc < 1:9145084/93‑1 (MQ=255)
tACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACt > 2:6769735/1‑93 (MQ=255)
aCATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACtt < 1:4743937/93‑1 (MQ=255)
aCATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACtt > 1:3685644/1‑93 (MQ=255)
aCATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACtt > 1:4922944/1‑93 (MQ=255)
aCATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACtt < 2:7235647/93‑1 (MQ=255)
cattcattCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTc > 1:1642279/1‑93 (MQ=255)
cattcattCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTc < 2:3169355/93‑1 (MQ=255)
catgcattCCCCTACCGAGAACAAATTCACGCGCAATGGTGGGGG‑TTCAGGCATTTGTACGCCCTGAGCAAAGACCAGTTGTTCAATCACTTc < 1:4123313/93‑1 (MQ=255)
tcattcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcggc > 2:5995898/1‑93 (MQ=255)
attcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcggcgg < 2:2236725/93‑1 (MQ=255)
attcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcggcgg < 2:4931254/93‑1 (MQ=255)
ttcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCggg > 1:9106126/1‑93 (MQ=255)
ttcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCggg > 2:7296238/1‑93 (MQ=255)
tcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCgggg < 1:3853950/93‑1 (MQ=255)
cccGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGa < 2:1798078/93‑1 (MQ=255)
ccGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGAt > 1:9347845/1‑93 (MQ=255)
gTACCGAGAACAATTTCACGCGCTATGTT‑GTGGCTTCAGGCATTTGTACGACCTGACCAAATACCAGTTGTTCGATCACTTCGGCGGGGAtct > 1:9782513/1‑93 (MQ=255)
gTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGAtct < 2:8503681/93‑1 (MQ=255)
gTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGAtct < 2:6904613/93‑1 (MQ=255)
tACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGAtctc > 2:9685506/1‑93 (MQ=255)
tACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGAtctc > 2:6213471/1‑93 (MQ=255)
tACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGAtctc < 2:1576571/93‑1 (MQ=255)
aCCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCg < 1:1784867/93‑1 (MQ=255)
aCCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCg > 1:2376403/1‑93 (MQ=255)
ccGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGc > 2:6689911/1‑93 (MQ=255)
ccGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGc > 1:8034788/1‑93 (MQ=255)
ccGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGc < 1:6526946/93‑1 (MQ=255)
ccGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGc > 1:2771730/1‑93 (MQ=255)
cGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGGTCTCGCt > 1:2011638/1‑93 (MQ=255)
gagaACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTg > 2:3558964/1‑93 (MQ=255)
aaCAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGt < 1:6322838/93‑1 (MQ=255)
aaCAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGt > 1:2844312/1‑93 (MQ=255)
cAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGc > 1:8591957/1‑93 (MQ=255)
aTTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCca > 1:1318778/1‑93 (MQ=255)
cACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCcagcag > 2:8347306/1‑93 (MQ=255)
cACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCcagcag < 1:2624064/93‑1 (MQ=255)
cACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCcagcag < 2:88096/93‑1 (MQ=255)
gcgcAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTc < 1:1028473/93‑1 (MQ=255)
gcAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTTCGTGCCAGCAGTTCGc < 1:8181720/93‑1 (MQ=255)
gcAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGc > 2:3932522/1‑93 (MQ=255)
cAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGcc > 2:5831882/1‑93 (MQ=255)
aaTGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGGGCCAGCAGTTCGCCt > 1:5235500/1‑93 (MQ=255)
|
GCCTGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTA > NC_000913/2458176‑2458356
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCACCA > NC_000913/2458179‑2458362
|
TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGT > SRR4302540.9344039/1‑94 (MQ=60)
TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGC < SRR4302540.5234062/94‑1 (MQ=60)
GAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTT > SRR4302540.718992/1‑94 (MQ=60)
AAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTC > SRR4302540.6169985/1‑94 (MQ=60)
ACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACACTTTAACGCGCAATGTT‑GGGGCTTCAG < SRR4302540.9988173/94‑1 (MQ=60)
CTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGG < SRR4302540.5496285/94‑1 (MQ=60)
GGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCA > SRR4302540.4329172/1‑94 (MQ=60)
GTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCAT > SRR4302540.2701576/1‑94 (MQ=60)
GTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCAT < SRR4302540.8231677/94‑1 (MQ=60)
GTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCAT < SRR4302540.1411612/94‑1 (MQ=60)
TAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATT < SRR4302540.5034791/94‑1 (MQ=60)
TAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATT < SRR4302540.1601833/94‑1 (MQ=60)
TAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGCT‑GGGGCTTCAGGTATT > SRR4302540.9387709/1‑94 (MQ=60)
GCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTG < SRR4302540.1459110/94‑1 (MQ=60)
GCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTG < SRR4302540.6880023/94‑1 (MQ=60)
CGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGT > SRR4302540.759061/1‑94 (MQ=60)
GCAAGCGCGGCTGACGCTGTAGGCATCGGTCTGCACATTCATGCCGGTAACGAGAACAATTTCACGCGCAATGCT‑GGGGCTTGAGGCATTTGTA > SRR4302540.9593339/1‑94 (MQ=48)
GCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACGATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTA > SRR4302540.7917374/1‑94 (MQ=60)
GCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTA < SRR4302540.3867521/94‑1 (MQ=60)
GCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTA < SRR4302540.851616/94‑1 (MQ=60)
CAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTAC < SRR4302540.7252753/94‑1 (MQ=60)
CAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTAC < SRR4302540.8810692/94‑1 (MQ=60)
CAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTAC < SRR4302540.518990/94‑1 (MQ=60)
AAGCGCGGCTGACGCTGTACGCCTCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACG < SRR4302540.9092891/94‑1 (MQ=60)
AAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACG > SRR4302540.3671185/1‑94 (MQ=60)
AAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACG > SRR4302540.3475726/1‑94 (MQ=60)
AAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACG > SRR4302540.8167400/1‑94 (MQ=60)
AAGCGCGACTGACGCTATAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACG < SRR4302540.9068055/94‑1 (MQ=60)
AGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGA > SRR4302540.207505/1‑94 (MQ=60)
GCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCT < SRR4302540.5877865/94‑1 (MQ=60)
GCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCT > SRR4302540.10013050/1‑94 (MQ=60)
CGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTG < SRR4302540.5127730/94‑1 (MQ=60)
CGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTG > SRR4302540.6442752/1‑94 (MQ=60)
GGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGA > SRR4302540.7440437/1‑94 (MQ=60)
GCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGAC < SRR4302540.7103384/94‑1 (MQ=60)
CTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACC > SRR4302540.3099804/1‑94 (MQ=60)
CTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACC > SRR4302540.7836608/1‑94 (MQ=60)
TGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCA > SRR4302540.4273326/1‑94 (MQ=60)
TGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCA > SRR4302540.4273325/1‑94 (MQ=60)
TGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCA > SRR4302540.2769581/1‑94 (MQ=60)
TGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTGCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCA > SRR4302540.4235211/1‑94 (MQ=60)
GACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAA > SRR4302540.8265381/1‑94 (MQ=60)
ACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAA < SRR4302540.4010974/94‑1 (MQ=60)
ACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAA < SRR4302540.1431047/94‑1 (MQ=60)
CGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAG < SRR4302540.6806658/94‑1 (MQ=60)
CGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAG > SRR4302540.3838229/1‑94 (MQ=60)
GCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGA > SRR4302540.8236501/1‑94 (MQ=60)
GCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGA < SRR4302540.339045/94‑1 (MQ=60)
CTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAC > SRR4302540.3064036/1‑94 (MQ=60)
CTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAC < SRR4302540.9925063/94‑1 (MQ=60)
GTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCA > SRR4302540.7564075/1‑94 (MQ=60)
GTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAACACCA > SRR4302540.4236612/1‑94 (MQ=60)
TAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAG < SRR4302540.10011937/94‑1 (MQ=60)
AGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTT < SRR4302540.8952472/94‑1 (MQ=60)
CATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGT < SRR4302540.9310473/94‑1 (MQ=60)
CATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGT < SRR4302540.10109079/94‑1 (MQ=60)
CATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGT < SRR4302540.2911158/94‑1 (MQ=60)
ATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTT > SRR4302540.9627029/1‑94 (MQ=60)
ATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTT > SRR4302540.6915383/1‑94 (MQ=60)
ATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTT > SRR4302540.4158139/1‑94 (MQ=60)
TCGGTATGTACATTCATTCCCATACCGAGAACAATTGCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTC < SRR4302540.4711009/94‑1 (MQ=60)
ACGGTATGTACATTCATTCCCGTACCGAGAACAATCGCACGCGCAATGTT‑GGGGTTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTC < SRR4302540.6883773/94‑1 (MQ=60)
CGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCA < SRR4302540.9971330/94‑1 (MQ=60)
CGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCA < SRR4302540.4639744/94‑1 (MQ=60)
CGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCA > SRR4302540.1466648/1‑94 (MQ=60)
GGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAA < SRR4302540.1670292/94‑1 (MQ=60)
gctcttccgatctagcgctTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAAT < SRR4302540.9438642/75‑1 (MQ=60)
GTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAAT < SRR4302540.2051796/94‑1 (MQ=60)
GTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAAT > SRR4302540.2369519/1‑94 (MQ=60)
TATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATC < SRR4302540.1541445/94‑1 (MQ=60)
TATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATC < SRR4302540.4916250/94‑1 (MQ=60)
TATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATC < SRR4302540.4916251/94‑1 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCCGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA > SRR4302540.4033555/1‑94 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATac > SRR4302540.3171368/1‑92 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA > SRR4302540.465944/1‑94 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA > SRR4302540.5228996/1‑94 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA > SRR4302540.4916356/1‑94 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA > SRR4302540.4033554/1‑94 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA > SRR4302540.6780813/1‑94 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA > SRR4302540.6076413/1‑94 (MQ=60)
GTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCACTCACT > SRR4302540.5446163/1‑94 (MQ=60)
GTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACT < SRR4302540.9254933/94‑1 (MQ=60)
TACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTT < SRR4302540.3859164/94‑1 (MQ=60)
TACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTT > SRR4302540.3725916/1‑94 (MQ=60)
TACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTT > SRR4302540.4975991/1‑94 (MQ=60)
TACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTT < SRR4302540.9908240/94‑1 (MQ=60)
ACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTC < SRR4302540.4794561/94‑1 (MQ=60)
ACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTC > SRR4302540.1660226/1‑94 (MQ=60)
CATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCG < SRR4302540.6460650/94‑1 (MQ=60)
CATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCG < SRR4302540.4870674/94‑1 (MQ=60)
CATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCG < SRR4302540.8311323/94‑1 (MQ=60)
CATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCG < SRR4302540.4167844/94‑1 (MQ=60)
CATGCATTCCCCTACCGAGAACAAATTCACGCGCAATGGTGGGGG‑TTCAGGCATTTGTACGCCCTGAGCAAAGACCAGTTGTTCAATCACTTCG < SRR4302540.4167843/94‑1 (MQ=60)
TTCATTCCCGTACCGAGAACAATTTCACGCGCAATGGT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTCTTCAATCACTTCGTC > SRR4302540.8135275/1‑94 (MQ=60)
TCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCG > SRR4302540.6695724/1‑94 (MQ=60)
TCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCG > SRR4302540.6668986/1‑94 (MQ=60)
ATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGG > SRR4302540.9215554/1‑94 (MQ=60)
ATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGG > SRR4302540.2453093/1‑94 (MQ=60)
ATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGG > SRR4302540.9215555/1‑94 (MQ=60)
TCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGA > SRR4302540.3616544/1‑94 (MQ=60)
TCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGA < SRR4302540.3895851/94‑1 (MQ=60)
CCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGAT > SRR4302540.2814992/1‑94 (MQ=60)
CCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGAT > SRR4302540.9459196/1‑94 (MQ=60)
CGTACCGAGAACAATTTCACGCGCTATGTT‑GTGGCTTCAGGCATTTGTACGACCTGACCAAATACCAGTTGTTCGATCACTTCGGCGGGGATCT > SRR4302540.9897157/1‑94 (MQ=60)
CGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCT > SRR4302540.3902739/1‑94 (MQ=60)
CGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCT > SRR4302540.2423176/1‑94 (MQ=60)
TACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCG > SRR4302540.2359682/1‑94 (MQ=60)
TACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCG > SRR4302540.2402016/1‑94 (MQ=60)
TACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCG > SRR4302540.8522753/1‑94 (MQ=60)
ACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGC < SRR4302540.1804254/94‑1 (MQ=60)
ACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGC < SRR4302540.1804253/94‑1 (MQ=60)
ACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGC > SRR4302540.2801679/1‑94 (MQ=60)
ACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGC > SRR4302540.8128181/1‑94 (MQ=60)
CCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGGTCTCGCT > SRR4302540.2033392/1‑94 (MQ=60)
CCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCT < SRR4302540.6599430/94‑1 (MQ=60)
CGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTG < SRR4302540.9439251/94‑1 (MQ=60)
GAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGC > SRR4302540.4827507/1‑94 (MQ=60)
GAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGC > SRR4302540.8855223/1‑94 (MQ=60)
GAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGC > SRR4302540.7754024/1‑94 (MQ=60)
GAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCGAAGACCAGTTGTTCAATCACTTCGGCGGCGATCTCGCCGCGT > SRR4302540.3799716/1‑94 (MQ=60)
GAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATTTCGCTGCGG > SRR4302540.3799719/1‑94 (MQ=60)
GAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGT > SRR4302540.2875091/1‑94 (MQ=60)
GAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGT > SRR4302540.2875090/1‑94 (MQ=60)
AACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTG < SRR4302540.6393253/94‑1 (MQ=60)
AACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTG > SRR4302540.4354831/1‑94 (MQ=60)
AACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTG < SRR4302540.6393252/94‑1 (MQ=60)
AACAATTTCACGCGCAATGGT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTG < SRR4302540.1446557/94‑1 (MQ=60)
ACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGC > SRR4302540.8691839/1‑94 (MQ=60)
ACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGC > SRR4302540.1055730/1‑94 (MQ=60)
AATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCA > SRR4302540.1332504/1‑94 (MQ=60)
AATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCA > SRR4302540.1332503/1‑94 (MQ=60)
AATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCA > SRR4302540.1927846/1‑94 (MQ=60)
AATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCA < SRR4302540.5617657/94‑1 (MQ=60)
cgatctagcgcttatgttGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCA < SRR4302540.4323601/76‑1 (MQ=60)
ATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGCTCTCGCTGCGTGCCAG > SRR4302540.2711931/1‑94 (MQ=60)
TTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCA < SRR4302540.7064730/94‑1 (MQ=60)
TTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCA > SRR4302540.9847884/1‑94 (MQ=60)
TTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCA > SRR4302540.9994697/1‑94 (MQ=60)
CACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGT < SRR4302540.2652437/94‑1 (MQ=60)
CACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCACCAGT > SRR4302540.4608355/1‑94 (MQ=60)
CGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTC < SRR4302540.8971055/94‑1 (MQ=60)
CGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTC < SRR4302540.1895292/94‑1 (MQ=60)
CGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTC < SRR4302540.1246630/94‑1 (MQ=60)
GCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCG < SRR4302540.1038905/94‑1 (MQ=60)
CGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGC > SRR4302540.2058651/1‑94 (MQ=60)
CGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGC > SRR4302540.4311787/1‑94 (MQ=60)
GCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTTCGTGCCAGCAGTTCGCC < SRR4302540.8276753/94‑1 (MQ=60)
GCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCC > SRR4302540.9188790/1‑94 (MQ=60)
CAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCT < SRR4302540.5393529/94‑1 (MQ=60)
CAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGGGCCAGCAGTTCGCCT > SRR4302540.5292612/1‑94 (MQ=60)
AATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTA > SRR4302540.7470463/1‑94 (MQ=60)
ATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTAC > SRR4302540.3920772/1‑94 (MQ=60)
GTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCC > SRR4302540.2474221/1‑94 (MQ=60)
GTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCA < SRR4302540.6618795/94‑1 (MQ=60)
GTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCA > SRR4302540.2311150/1‑94 (MQ=60)
GTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCA < SRR4302540.5585587/94‑1 (MQ=60)
GTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCA > SRR4302540.1930537/1‑94 (MQ=60)
GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCACCA > SRR4302540.2015580/1‑94 (MQ=60)
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TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCACCA > NC_000913/2458179‑2458362
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
