Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,458,272 |
(G)5→4 |
coding (218/1311 nt) |
b2342 ← |
putative acyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,458,268 | 0 | G | . | 100.0%
| 863.7
/ NA
| 187 | coding (222/1311 nt) | b2342 | putative acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (95/92); total (95/92) |
Only 100 of 214 total aligned reads displayed.
GCCTGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTA > NC_000913/2458176‑2458356
|
gCCTGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTg < 2:1137263/93‑1 (MQ=255)
gCCTGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTg > 2:4981027/1‑93 (MQ=255)
cTGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTggg < 1:478853/93‑1 (MQ=255)
cTGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTggg > 2:4590055/1‑93 (MQ=255)
tGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTgggg > 1:176968/1‑93 (MQ=255)
ggAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGGAATGTTggggc > 2:1204129/1‑92 (MQ=255)
ggAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTggggc > 2:724191/1‑92 (MQ=255)
ggAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTggggc > 1:2325378/1‑92 (MQ=255)
aaaCTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTggggctt > 1:2929822/1‑90 (MQ=255)
aaCTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTggggcttc < 1:2062866/93‑5 (MQ=255)
aCTTGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCa < 2:5233817/93‑1 (MQ=255)
aCTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCATTGTT‑GGGGCTTCa < 2:6193210/93‑1 (MQ=255)
cTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGCGAACAATTTCACGCGCAATGTTGGGGG‑TTCAg > 2:1928995/1‑93 (MQ=255)
cTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAg > 1:6087287/1‑93 (MQ=255)
cTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAg < 2:2002005/93‑1 (MQ=255)
tGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAgg > 1:5489812/1‑93 (MQ=255)
ggTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGc < 2:3127660/93‑1 (MQ=255)
gTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCa < 2:585721/93‑1 (MQ=255)
aGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCAtt < 1:2457286/93‑1 (MQ=255)
aGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCAtt > 2:1115651/1‑93 (MQ=255)
gcgcAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCAttt < 2:3156905/93‑1 (MQ=255)
cAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTa > 1:189227/1‑93 (MQ=255)
cAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTa < 2:1383157/93‑1 (MQ=255)
cAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTa > 1:822547/1‑93 (MQ=255)
cAAGCGCGGCTGACACTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTa < 1:1066733/93‑1 (MQ=255)
aaGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCCCAATGTT‑GGGGCTTCAGGCATTTGTAc < 1:3833360/93‑1 (MQ=255)
aGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACg > 2:1475725/1‑93 (MQ=255)
gcgcGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGa > 2:4415353/1‑93 (MQ=255)
gcgcGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGa > 2:5839/1‑93 (MQ=255)
gcgGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGAcc < 2:3183995/93‑1 (MQ=255)
gcgGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGAcc > 1:61388/1‑93 (MQ=255)
cgGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCt < 1:4414863/93‑1 (MQ=255)
ggCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTg > 2:5545622/1‑93 (MQ=255)
gCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGa > 2:2385121/1‑93 (MQ=255)
gCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGa < 2:6095788/93‑1 (MQ=255)
gCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGa < 1:599994/93‑1 (MQ=255)
gACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCa > 1:222598/1‑93 (MQ=255)
cGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCaaa > 2:330147/1‑93 (MQ=255)
cGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCaaa < 2:3753202/93‑1 (MQ=255)
cGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCaaa > 1:112967/1‑93 (MQ=255)
tGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAc > 2:3830018/1‑93 (MQ=255)
tGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTACACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAc > 1:2982863/1‑93 (MQ=255)
gTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAcc > 1:3282227/1‑93 (MQ=255)
gTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAcc < 2:640614/93‑1 (MQ=255)
gTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAcc < 2:2298948/93‑1 (MQ=255)
gTAAGCAGCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCACTGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCACAGAcc > 2:5805867/1‑93 (MQ=255)
tAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCa < 2:886368/93‑1 (MQ=255)
aGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAgt < 2:2212900/93‑1 (MQ=255)
aGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAgt < 1:86809/93‑1 (MQ=255)
gCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAgtt < 2:1552862/93‑1 (MQ=255)
gCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAgtt < 1:1390813/93‑1 (MQ=255)
cATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAgttg < 2:3068250/93‑1 (MQ=255)
aTCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAgttgt < 2:5081239/93‑1 (MQ=255)
tCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAgttgtt > 1:1205921/1‑93 (MQ=255)
cGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTc < 1:4157044/93‑1 (MQ=255)
ggTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCa > 2:5391104/1‑93 (MQ=255)
ggTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCa > 2:5763499/1‑93 (MQ=255)
ggTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCa > 2:62596/1‑93 (MQ=255)
gTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCaa < 1:663398/93‑1 (MQ=255)
tATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAAt < 1:2544314/93‑1 (MQ=255)
aTGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATc > 1:3084675/1‑93 (MQ=255)
aTGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATc < 1:3908942/93‑1 (MQ=255)
aTGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATc > 2:1667357/1‑93 (MQ=255)
tGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCa > 1:6022465/1‑93 (MQ=255)
tGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCa > 1:4506174/1‑93 (MQ=255)
aCATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACtt > 1:5170263/1‑93 (MQ=255)
attcattcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcg > 1:3624979/1‑93 (MQ=255)
ttcattcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcgg > 2:5208817/1‑93 (MQ=255)
tcattcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcggc > 1:1560839/1‑93 (MQ=255)
tcattcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcggc > 2:4536859/1‑93 (MQ=255)
cattcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcggcg > 2:2473159/1‑93 (MQ=255)
cattcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcggcg > 2:1825989/1‑93 (MQ=255)
cattcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcggcg > 2:3902723/1‑93 (MQ=255)
attcCCTTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcggcgg < 1:2788168/93‑1 (MQ=255)
attcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTGAATCACTTcggcgg > 2:4195425/1‑93 (MQ=255)
attcCCGTACCGAGAACAATCTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTcggcgg < 2:3666125/93‑1 (MQ=255)
ttcCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCggg < 1:5064539/93‑1 (MQ=255)
tACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGAtctc < 1:4804141/93‑1 (MQ=255)
aCCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCg > 1:1280245/1‑93 (MQ=255)
aCCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCg < 2:5417860/93‑1 (MQ=255)
ccGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGc > 1:2384000/1‑93 (MQ=255)
ccGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGc > 1:5343004/1‑93 (MQ=255)
ccGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGc < 2:5620613/93‑1 (MQ=255)
cGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCt > 2:5062779/1‑93 (MQ=255)
agaACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGc > 2:3378788/1‑93 (MQ=255)
agaACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGc < 1:5914821/93‑1 (MQ=255)
aaTTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGcc > 2:3968012/1‑93 (MQ=255)
aaTTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGcc > 1:201433/1‑93 (MQ=255)
aTTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCca < 1:5781616/93‑1 (MQ=255)
tttCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCcag < 1:4269201/93‑1 (MQ=255)
tCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCcagca > 1:5602903/1‑93 (MQ=255)
cACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGCTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCcagcag > 2:2045170/1‑93 (MQ=255)
aCGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGt < 2:2587507/93‑1 (MQ=255)
aCGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGt > 1:1433799/1‑93 (MQ=255)
gcgcAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTc < 2:2967511/93‑1 (MQ=255)
gcgcAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTc > 1:6224424/1‑93 (MQ=255)
gcgcAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGATGTTCAATCACTTCGGCGGGGGTCTCGCTGCGCGGCCGCAGTTc > 2:1736812/1‑93 (MQ=255)
cgcAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCg > 1:4011243/1‑93 (MQ=255)
cAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGcc > 2:4025098/1‑93 (MQ=255)
cAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGcc > 2:2506570/1‑93 (MQ=255)
|
GCCTGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTA > NC_000913/2458176‑2458356
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCACCATCT > NC_000913/2458179‑2458365
|
TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGC > SRR4302533.3267654/1‑94 (MQ=60)
TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGC > SRR4302533.3877254/1‑94 (MQ=60)
TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGC > SRR4302533.871907/1‑94 (MQ=60)
TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGC > SRR4302533.1999079/1‑94 (MQ=60)
TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGC > SRR4302533.2339776/1‑94 (MQ=60)
GAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTT > SRR4302533.2947744/1‑94 (MQ=60)
AACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCATTGTT‑GGGGCTTCA < SRR4302533.2508413/94‑1 (MQ=60)
AACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCA < SRR4302533.2075585/94‑1 (MQ=60)
ACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAG > SRR4302533.6124086/1‑94 (MQ=60)
CTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGG > SRR4302533.5867121/1‑94 (MQ=60)
CTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGG > SRR4302533.5522904/1‑94 (MQ=60)
CTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGG < SRR4302533.4621958/94‑1 (MQ=60)
AGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTT < SRR4302533.2472450/94‑1 (MQ=60)
GCAAGCGCGGCTGACGCTGTGAGCATCGGTATATACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTA < SRR4302533.2054003/94‑1 (MQ=60)
GCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTA > SRR4302533.167712/1‑94 (MQ=60)
GCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTA < SRR4302533.6044132/94‑1 (MQ=60)
GCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTA > SRR4302533.827374/1‑94 (MQ=60)
GCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTA > SRR4302533.190406/1‑94 (MQ=60)
CAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTAC < SRR4302533.4498904/94‑1 (MQ=60)
CAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTAC < SRR4302533.3015199/94‑1 (MQ=60)
CAAGCGCGGCTGACACTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTAC < SRR4302533.1073002/94‑1 (MQ=60)
AAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCCCAATGTT‑GGGGCTTCAGGCATTTGTACG < SRR4302533.3856788/94‑1 (MQ=60)
CGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACC > SRR4302533.61791/1‑94 (MQ=60)
CGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTG < SRR4302533.4441522/94‑1 (MQ=60)
GCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGAC < SRR4302533.733108/94‑1 (MQ=60)
GCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGAC > SRR4302533.1317415/1‑94 (MQ=60)
GCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGAC < SRR4302533.603524/94‑1 (MQ=60)
CTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACC > SRR4302533.6158246/1‑94 (MQ=60)
CTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACC < SRR4302533.6261191/94‑1 (MQ=60)
TGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCA > SRR4302533.223989/1‑94 (MQ=60)
ACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAA > SRR4302533.113682/1‑94 (MQ=60)
CGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAG < SRR4302533.2788274/94‑1 (MQ=60)
GCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGA > SRR4302533.4205240/1‑94 (MQ=60)
CTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAC > SRR4302533.5121541/1‑94 (MQ=60)
CTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAC > SRR4302533.1268200/1‑94 (MQ=60)
CTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTACACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGAC > SRR4302533.3001109/1‑94 (MQ=60)
TGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACC > SRR4302533.3302491/1‑94 (MQ=60)
AGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTT < SRR4302533.1134640/94‑1 (MQ=60)
AGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTT < SRR4302533.87368/94‑1 (MQ=60)
GCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTG < SRR4302533.1399190/94‑1 (MQ=60)
ATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTT > SRR4302533.1213165/1‑94 (MQ=60)
TCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTC < SRR4302533.1893743/94‑1 (MQ=60)
CGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCA < SRR4302533.4182233/94‑1 (MQ=60)
CGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCA < SRR4302533.599259/94‑1 (MQ=60)
CGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCA < SRR4302533.496444/94‑1 (MQ=60)
GTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAAT < SRR4302533.667315/94‑1 (MQ=60)
TATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATC > SRR4302533.3103642/1‑94 (MQ=60)
TATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATC < SRR4302533.2559972/94‑1 (MQ=60)
TATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATC < SRR4302533.1496172/94‑1 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA > SRR4302533.2977120/1‑94 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA < SRR4302533.3932817/94‑1 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA > SRR4302533.6058963/1‑94 (MQ=60)
ATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCA > SRR4302533.4533468/1‑94 (MQ=60)
TGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCAC > SRR4302533.607797/1‑94 (MQ=60)
TTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACT < SRR4302533.2382685/94‑1 (MQ=60)
GTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACT < SRR4302533.230888/94‑1 (MQ=60)
GTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACT < SRR4302533.6343897/94‑1 (MQ=60)
TACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTT > SRR4302533.5201467/1‑94 (MQ=60)
CATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCG > SRR4302533.3647284/1‑94 (MQ=60)
ATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGG < SRR4302533.5409018/94‑1 (MQ=60)
ATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGG > SRR4302533.4571401/1‑94 (MQ=60)
TTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGC > SRR4302533.1570239/1‑94 (MQ=60)
TCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCG > SRR4302533.5794307/1‑94 (MQ=60)
TCATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCG > SRR4302533.4825278/1‑94 (MQ=60)
CATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGG > SRR4302533.2090913/1‑94 (MQ=60)
CATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGG > SRR4302533.365043/1‑94 (MQ=60)
ATTCCCTTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGG < SRR4302533.2805300/94‑1 (MQ=60)
ATTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGG > SRR4302533.4028746/1‑94 (MQ=60)
TTCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGG < SRR4302533.5095133/94‑1 (MQ=60)
TCCCGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGA > SRR4302533.348421/1‑94 (MQ=60)
CGTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAGTCACTTCGGCGGGGATCT > SRR4302533.4102913/1‑94 (MQ=60)
GTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTC > SRR4302533.1420650/1‑94 (MQ=60)
GTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTC < SRR4302533.4368208/94‑1 (MQ=60)
GTACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTC < SRR4302533.5779042/94‑1 (MQ=60)
TACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCG < SRR4302533.4833234/94‑1 (MQ=60)
TACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCG < SRR4302533.5245713/94‑1 (MQ=60)
TACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCG > SRR4302533.1287941/1‑94 (MQ=60)
ACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGC > SRR4302533.2398737/1‑94 (MQ=60)
ACCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGC > SRR4302533.5375045/1‑94 (MQ=60)
CCGAGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCT < SRR4302533.1780845/94‑1 (MQ=60)
AGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCG < SRR4302533.5950566/94‑1 (MQ=60)
AGAACAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCG < SRR4302533.3664747/94‑1 (MQ=60)
CAATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCC > SRR4302533.202713/1‑94 (MQ=60)
ATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAG < SRR4302533.1157526/94‑1 (MQ=60)
ATTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAG < SRR4302533.5816533/94‑1 (MQ=60)
TTTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGC < SRR4302533.4294900/94‑1 (MQ=60)
TTCACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCA > SRR4302533.5636758/1‑94 (MQ=60)
CACGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGT > SRR4302533.1442459/1‑94 (MQ=60)
CGCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTC > SRR4302533.6261722/1‑94 (MQ=60)
GCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCG > SRR4302533.4035665/1‑94 (MQ=60)
GCGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCG < SRR4302533.634936/94‑1 (MQ=60)
CGCAATGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGC > SRR4302533.2837608/1‑94 (MQ=60)
TGTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACC < SRR4302533.2134647/94‑1 (MQ=60)
GTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCA < SRR4302533.717395/94‑1 (MQ=60)
GTT‑GGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCA > SRR4302533.5636585/1‑94 (MQ=60)
TTGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCAC > SRR4302533.473217/1‑94 (MQ=60)
TTGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCAC > SRR4302533.1899236/1‑94 (MQ=60)
TTGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCAC < SRR4302533.2291996/94‑1 (MQ=60)
TTGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCAC < SRR4302533.4867902/94‑1 (MQ=60)
TGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCACC < SRR4302533.5548790/94‑1 (MQ=60)
GGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCACCAT < SRR4302533.1540166/94‑1 (MQ=60)
GGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCACCAT > SRR4302533.1124814/1‑94 (MQ=60)
GGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCACCATC < SRR4302533.6233475/94‑1 (MQ=60)
GCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCACCATCT < SRR4302533.5430922/94‑1 (MQ=60)
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TGGAAACTGGTAGCGCAAGCGCGGCTGACGCTGTAAGCATCGGTATGTACATTCATTCCCGTACCGAGAACAATTTCACGCGCAATGTTGGGGGCTTCAGGCATTTGTACGACCTGACCAAAGACCAGTTGTTCAATCACTTCGGCGGGGATCTCGCTGCGTGCCAGCAGTTCGCCTACCACCATCT > NC_000913/2458179‑2458365
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
