Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,458,650	+G	intergenic (‑161/+20)	b2342 ← / ← b2343	putative acyltransferase/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,458,646	1	.	G	99.2%	858.3 / ‑1.9	267	intergenic (‑157/+24)	b2342/b2343	putative acyltransferase/hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/1); new base G (133/132); total (134/133)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 299 total aligned reads displayed.

ACATTTAGCCAAGTGGAGAAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCC  >  NC_000913/2458554‑2458733

aCATTTAGCCAAGTGGAGAAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACa                                                                                           >  2:9688794/1‑93 (MQ=255)

aCATTTAGCCAAGTGGAGAAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACa                                                                                           >  1:4344970/1‑93 (MQ=255)

  aTTTAGCCAAGTGGAGAAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑gg                                                                                        <  2:5235499/93‑1 (MQ=255)

   tttAGCCAAGTGGAGAAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑ggg                                                                                       >  2:4216586/1‑93 (MQ=255)

    ttggCCAAGTGGAGAAAAGGGAAA‑GGGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑gggg                                                                                      <  2:2203295/90‑1 (MQ=255)

    ttAGCCAAGTGGAGAAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑gggg                                                                                      <  2:2752549/93‑1 (MQ=255)

     tAGCCAAGTGGAGAAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑ggggg                                                                                     <  2:812973/93‑2 (MQ=255)

      aGCCAAGTGGATAAAAGGGAAA‑GTGGGAGCTATTACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑gggggc                                                                                    <  1:9347317/93‑3 (MQ=255)

        ccAAGTGGAGAAAAGGGAAA‑GTTGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCAAGCAACTGACA‑gggggcgt                                                                                  >  1:1837000/1‑89 (MQ=255)

           aGTGGAGAAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑cgtacg                                                                               >  2:3717600/1‑93 (MQ=255)

               gagaAAAGAGAAG‑GGGGGAGCAATCACCCAGAAAAAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTAcc                                                                           <  1:3911104/93‑1 (MQ=255)

                agaAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTAccc                                                                          >  1:2809217/1‑93 (MQ=255)

                agaAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTAccc                                                                          >  1:3116698/1‑93 (MQ=255)

                  aaaaGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCga                                                                        <  1:6102391/93‑1 (MQ=255)

                    aaGGGAAAGGTGGGAGCAAGGACAAAGAGAAAAAAAAAAAAAAAAAAAAAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCgag                                                                       <  2:1952999/93‑1 (MQ=255)

                    aaGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCgaga                                                                      >  1:3847273/1‑93 (MQ=255)

                    aaGGGAAA‑GGGGGGGCAAAGACACAGAAAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCgaga                                                                      <  2:8041836/93‑1 (MQ=255)

                     aGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGagag                                                                     >  2:5034904/1‑93 (MQ=255)

                     aGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGagag                                                                     >  2:2339041/1‑93 (MQ=255)

                     aGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGagag                                                                     >  2:739160/1‑93 (MQ=255)

                        gAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGaa                                                                  <  2:3420814/93‑1 (MQ=255)

                         aaa‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAAt                                                                 <  2:8318953/93‑1 (MQ=255)

                             gTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTaa                                                              >  1:9914332/1‑93 (MQ=255)

                              tGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAAc                                                             >  1:3493703/1‑93 (MQ=255)

                              tGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAAc                                                             >  1:3189590/1‑93 (MQ=255)

                               gggAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACg                                                            >  2:6543038/1‑93 (MQ=255)

                                ggtgCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGc                                                           >  2:8544594/4‑93 (MQ=255)

                                 gAGCTATGACACAGAGATAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCa                                                          <  1:6504873/93‑1 (MQ=255)

                                 gAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCa                                                          <  2:2643611/93‑1 (MQ=255)

                                  aGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAg                                                         <  2:4871335/93‑1 (MQ=255)

                                  aGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAg                                                         <  1:10033432/93‑1 (MQ=255)

                                   gCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGa                                                        >  1:7253823/1‑93 (MQ=255)

                                    cTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGAc                                                       <  2:8680843/93‑1 (MQ=255)

                                     tATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGAcc                                                      >  2:3056038/1‑93 (MQ=255)

                                      aTGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGAccc                                                     >  2:2401601/1‑93 (MQ=255)

                                       tGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCa                                                    <  2:4586767/93‑1 (MQ=255)

                                          cacaGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCt                                                 >  2:9222126/1‑93 (MQ=255)

                                            caGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTgg                                               <  1:6641031/93‑1 (MQ=255)

                                            caGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTgg                                               >  2:6405523/1‑93 (MQ=255)

                                             agagagAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGa                                              >  1:2529796/1‑93 (MQ=255)

                                             agagagAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGa                                              >  1:5735711/1‑93 (MQ=255)

                                              gagagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTggca                                             >  2:2035006/1‑91 (MQ=255)

                                              gagagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaa                                             >  1:1390503/1‑93 (MQ=255)

                                              gagagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaa                                             <  1:4711827/93‑1 (MQ=255)

                                               agagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaaa                                            <  1:2547625/93‑1 (MQ=255)

                                                gagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaaaa                                           >  1:916885/1‑93 (MQ=255)

                                                gagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaaaa                                           >  1:7009535/1‑93 (MQ=255)

                                                 agaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAAt                                          >  1:3427242/1‑93 (MQ=255)

                                                 agaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAAt                                          >  1:8392833/1‑93 (MQ=255)

                                                 agaAAAAAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAAt                                          <  2:4475352/93‑1 (MQ=255)

                                                       gaagaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAt                                    >  2:9383911/1‑93 (MQ=255)

                                                       gaagaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAt                                    >  2:6341883/1‑93 (MQ=255)

                                                        aagaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAtt                                   >  2:7899601/1‑93 (MQ=255)

                                                        aagaagaAAAAAAAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAtt                                   <  1:5534403/93‑1 (MQ=255)

                                                         agaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAttt                                  >  2:1496726/1‑93 (MQ=255)

                                                         agaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAttt                                  >  1:5840141/1‑93 (MQ=255)

                                                          gaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTc                                 <  2:1289961/93‑1 (MQ=255)

                                                          gaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCACCATTTc                                 >  1:633091/1‑93 (MQ=255)

                                                           aagaGAGAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCa                                >  2:7206955/1‑93 (MQ=255)

                                                           aagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCa                                >  1:1019260/1‑93 (MQ=255)

                                                            agagAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAg                               >  1:7843034/1‑93 (MQ=255)

                                                             gagaAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGGTCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGc                              <  1:8020377/93‑1 (MQ=255)

                                                                 aaagaaaaCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCg                          <  1:50611/93‑1 (MQ=255)

                                                                 aaagaaaaCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCg                          >  1:6011100/1‑93 (MQ=255)

                                                                 aaagaaaaCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCg                          >  1:9628378/1‑93 (MQ=255)

                                                                 aaagaaaaCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCg                          <  1:8480700/93‑1 (MQ=255)

                                                                  aagaaaaCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGc                         >  2:8075311/1‑93 (MQ=255)

                                                                   ataaaaCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCa                        <  1:3663763/91‑1 (MQ=255)

                                                                   agaaaaCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCa                        >  1:2201464/1‑93 (MQ=255)

                                                                   agaaaaCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCa                        <  1:200458/93‑1 (MQ=255)

                                                                   agaaaaCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCa                        >  2:180581/1‑93 (MQ=255)

                                                                      aaaCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGc                     <  2:758617/93‑1 (MQ=255)

                                                                        aCGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCaa                   >  1:7423087/1‑93 (MQ=255)

                                                                           ccccTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAg                <  2:2770952/93‑1 (MQ=255)

                                                                           ccccTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAg                >  2:7766544/1‑93 (MQ=255)

                                                                           ccccTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAg                >  2:7055575/1‑93 (MQ=255)

                                                                            cccTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAgg               >  1:5314417/1‑92 (MQ=255)

                                                                            cccTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGt               >  1:1127736/1‑93 (MQ=255)

                                                                            cccTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGt               >  2:8924100/1‑93 (MQ=255)

                                                                             ccTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGCAAATCAGCATTTCAGCTTCGCAGGCAAAAGTg              >  1:7150420/1‑93 (MQ=255)

                                                                             ccTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTg              >  2:5520426/1‑93 (MQ=255)

                                                                             ccTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTg              >  2:6124175/1‑93 (MQ=255)

                                                                              cTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGa             <  1:5905502/93‑1 (MQ=255)

                                                                              cTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGa             <  1:3270112/93‑1 (MQ=255)

                                                                              cTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGa             <  2:3661400/93‑1 (MQ=255)

                                                                               tGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGaa            >  2:5605716/1‑93 (MQ=255)

                                                                               tGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGaa            >  1:6174810/1‑93 (MQ=255)

                                                                               tGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGAATTTCAGCTTCGCAGGCAAAGGTGaa            >  1:240164/1‑93 (MQ=255)

                                                                                gCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGaaa           >  1:1740147/1‑93 (MQ=255)

                                                                                  cAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATc         <  2:6757073/93‑1 (MQ=255)

                                                                                    gCAACTAACAGGGGG‑CGTACGTACCCGAGTGGAATTAACGCAGACCCAGCTGGAAAATGAGTAATTGAGCTTCGCAGGCAAAAGTTAAAACGa       >  2:6038659/1‑93 (MQ=255)

                                                                                     cAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGat      <  1:4558361/93‑1 (MQ=255)

                                                                                     cAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGat      <  2:3271481/93‑1 (MQ=255)

                                                                                      aaCTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGata     <  1:2955430/93‑1 (MQ=255)

                                                                                      aaCTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGata     <  1:8820885/93‑1 (MQ=255)

                                                                                       aCTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGatat    >  1:1621106/1‑93 (MQ=255)

                                                                                        cTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATc   >  1:6785143/1‑93 (MQ=255)

                                                                                         tGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc  <  2:9871182/93‑1 (MQ=255)

                                                                                         tGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc  <  2:8840073/93‑1 (MQ=255)

                                                                                         tGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc  >  2:1184336/1‑93 (MQ=255)

ACATTTAGCCAAGTGGAGAAAAGGGAAA‑GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCC  >  NC_000913/2458554‑2458733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACAC  >  NC_000913/2458557‑2458743

tttagccagttggaaaaaagggaaagttggaggattgacccagggagaaaaaaaaaaaaaAAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGG                                                                                                <  SRR4302540.2504083/34‑1 (MQ=60)

  TAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGGgc                                                                                              <  SRR4302540.9250494/94‑3 (MQ=60)

   AGCCAAGTGGATAAAAGGGAAAGTGGGAGCTATTACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGGgcg                                                                                             <  SRR4302540.9458664/94‑4 (MQ=60)

   AGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGGgcg                                                                                             >  SRR4302540.1670522/1‑91 (MQ=60)

    GCCAAGTGGAGAAAAGGGAAAGTTGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCAAGCAACTGACAGGGGG‑CGT                                                                                            >  SRR4302540.1857115/1‑94 (MQ=60)

     CCAAGTGGAGAAAAGGGAAAGTGGCAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTA                                                                                           >  SRR4302540.2975082/1‑94 (MQ=60)

      CAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTAC                                                                                          >  SRR4302540.7359030/1‑94 (MQ=60)

      CAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTAC                                                                                          <  SRR4302540.3321765/94‑1 (MQ=60)

      CAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTAC                                                                                          >  SRR4302540.309575/1‑94 (MQ=60)

      CAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTAC                                                                                          <  SRR4302540.978018/94‑1 (MQ=60)

        AGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGT                                                                                        >  SRR4302540.515354/1‑94 (MQ=60)

        AGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGT                                                                                        <  SRR4302540.1784997/94‑1 (MQ=60)

        AGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGT                                                                                        <  SRR4302540.1784732/94‑1 (MQ=60)

          TGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCACCTGTCAGCAACTGACAGGGGG‑CGTACGTAC                                                                                      >  SRR4302540.5967103/1‑94 (MQ=60)

           GGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACC                                                                                     <  SRR4302540.3433908/94‑1 (MQ=60)

           GGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACC                                                                                     >  SRR4302540.2245832/1‑94 (MQ=60)

            gagaaaagagaaggggggagcaatcacccagaaaaAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCC                                                                                    <  SRR4302540.3953481/59‑1 (MQ=60)

            GAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCC                                                                                    >  SRR4302540.3150773/1‑94 (MQ=60)

            GAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCC                                                                                    <  SRR4302540.6292738/94‑1 (MQ=60)

            GAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCC                                                                                    >  SRR4302540.2839553/1‑94 (MQ=60)

               AAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAG                                                                                 <  SRR4302540.471245/94‑1 (MQ=60)

               AAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAG                                                                                 <  SRR4302540.6170344/94‑1 (MQ=60)

               AAAAGGAAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAG                                                                                 <  SRR4302540.5750131/94‑1 (MQ=60)

                AAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGA                                                                                >  SRR4302540.3889109/1‑94 (MQ=60)

                AAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGA                                                                                >  SRR4302540.854176/1‑94 (MQ=60)

                 AAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAG                                                                               >  SRR4302540.7314212/1‑94 (MQ=60)

                   GGGAAAGTGGGAGCTATGACACAGAGAGAAAAGACGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGA                                                                             <  SRR4302540.6282660/94‑1 (MQ=60)

                     GAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAAT                                                                           <  SRR4302540.249293/94‑1 (MQ=60)

                      AAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATT                                                                          >  SRR4302540.1144613/1‑94 (MQ=60)

                       AAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTA                                                                         >  SRR4302540.2565527/1‑94 (MQ=60)

                        AGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAA                                                                        >  SRR4302540.10030125/1‑94 (MQ=60)

                         GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAAC                                                                       <  SRR4302540.748899/94‑1 (MQ=60)

                         GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAAC                                                                       >  SRR4302540.3224233/1‑94 (MQ=60)

                         GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAAC                                                                       >  SRR4302540.3531754/1‑94 (MQ=60)

                         GTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAAC                                                                       >  SRR4302540.3224234/1‑94 (MQ=60)

                          TGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACG                                                                      <  SRR4302540.5886316/94‑1 (MQ=60)

                            GGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCA                                                                    <  SRR4302540.5408713/94‑1 (MQ=60)

                            GGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCA                                                                    >  SRR4302540.3781921/1‑94 (MQ=60)

                             GAGCTATGACACAGAGATAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAG                                                                   <  SRR4302540.6577173/94‑1 (MQ=60)

                             GAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAG                                                                   <  SRR4302540.4672462/94‑1 (MQ=60)

                              AGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGA                                                                  <  SRR4302540.10150136/94‑1 (MQ=60)

                              AGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGA                                                                  >  SRR4302540.7334771/1‑94 (MQ=60)

                               GCTATGACACAGAGAGAAAAGAAGAAGAAAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGAC                                                                 <  SRR4302540.3914138/94‑1 (MQ=60)

                                taatgacaaaaaagagaaagaagagaaaaaaaaaaaacaccactgaCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGAAATTAACGCAGCCC                                                                <  SRR4302540.9064532/48‑1 (MQ=59)

                                CTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACC                                                                <  SRR4302540.6083890/94‑1 (MQ=60)

                                CTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACC                                                                <  SRR4302540.3975034/94‑1 (MQ=60)

                                CAATGACAAAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACC                                                                <  SRR4302540.3760923/94‑1 (MQ=60)

                                  ATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCA                                                              <  SRR4302540.4274162/94‑1 (MQ=60)

                                  ATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCA                                                              <  SRR4302540.5548474/94‑1 (MQ=60)

                                   TGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAG                                                             <  SRR4302540.6765147/94‑1 (MQ=60)

                                   TGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAG                                                             <  SRR4302540.5918378/94‑1 (MQ=60)

                                    GACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGC                                                            <  SRR4302540.8740943/94‑1 (MQ=60)

                                     ACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCT                                                           >  SRR4302540.3549529/1‑94 (MQ=60)

                                      CACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTG                                                          >  SRR4302540.6853478/1‑94 (MQ=60)

                                       ACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGG                                                         <  SRR4302540.1510432/94‑1 (MQ=60)

                                       ACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGG                                                         >  SRR4302540.1742761/1‑94 (MQ=60)

                                        TAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGA                                                        >  SRR4302540.2557093/1‑94 (MQ=60)

                                        CAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTCCCCGAGAGGAATTAACGCAGACCCAGCTGGA                                                        <  SRR4302540.6714515/94‑1 (MQ=60)

                                        CAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGA                                                        >  SRR4302540.5798896/1‑94 (MQ=60)

                                        CAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGA                                                        >  SRR4302540.5798897/1‑94 (MQ=60)

                                        CAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGA                                                        <  SRR4302540.6714516/94‑1 (MQ=60)

                                         AGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAA                                                       >  SRR4302540.5998196/1‑94 (MQ=60)

                                         AGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAA                                                       >  SRR4302540.1405386/1‑94 (MQ=60)

                                          GAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAA                                                      <  SRR4302540.4762177/94‑1 (MQ=60)

                                           AGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAA                                                     <  SRR4302540.2575080/94‑1 (MQ=60)

                                           AGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAA                                                     <  SRR4302540.8779015/94‑1 (MQ=60)

                                           AGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAA                                                     >  SRR4302540.926568/1‑94 (MQ=60)

                                           AGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAA                                                     >  SRR4302540.7087342/1‑94 (MQ=60)

                                            GAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAAT                                                    >  SRR4302540.3464488/1‑94 (MQ=60)

                                            GAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAAT                                                    >  SRR4302540.8490233/1‑94 (MQ=60)

                                            GAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAAT                                                    >  SRR4302540.7154560/1‑94 (MQ=60)

                                             AGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATC                                                   <  SRR4302540.9657462/94‑1 (MQ=60)

                                              GAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCA                                                  >  SRR4302540.7041601/1‑94 (MQ=60)

                                                AAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGC                                                >  SRR4302540.9618298/1‑94 (MQ=60)

                                                AAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATAAACGCAGACCCAGCTGGAAAATCAGC                                                >  SRR4302540.3017552/1‑94 (MQ=60)

                                                AAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCA                                               >  SRR4302540.9777741/1‑94 (MQ=60)

                                                 AAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCA                                               <  SRR4302540.2865249/94‑1 (MQ=60)

                                                  AGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAT                                              >  SRR4302540.6462769/1‑94 (MQ=60)

                                                  AGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAT                                              >  SRR4302540.649213/1‑94 (MQ=60)

                                                  AGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAT                                              >  SRR4302540.6674475/1‑94 (MQ=60)

                                                    AAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTT                                            >  SRR4302540.5904722/1‑94 (MQ=60)

                                                    AAGAAGAAAAAAAAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTT                                            <  SRR4302540.5595346/94‑1 (MQ=60)

                                                     AGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCACCATTTC                                           >  SRR4302540.639821/1‑94 (MQ=60)

                                                      aaggagagaagagcACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCA                                          <  SRR4302540.9139700/80‑1 (MQ=60)

                                                      GAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCA                                          <  SRR4302540.2566549/94‑1 (MQ=60)

                                                      GAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCA                                          <  SRR4302540.612846/94‑1 (MQ=60)

                                                      GAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCA                                          <  SRR4302540.1247233/94‑1 (MQ=60)

                                                      GAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCA                                          >  SRR4302540.1029606/1‑94 (MQ=60)

                                                       AAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAG                                         <  SRR4302540.7889080/94‑1 (MQ=60)

                                                       AAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAG                                         >  SRR4302540.22136/1‑94 (MQ=60)

                                                       AAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAG                                         >  SRR4302540.7934680/1‑94 (MQ=60)

                                                        AGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGC                                        >  SRR4302540.4871469/1‑94 (MQ=60)

                                                        AGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGC                                        <  SRR4302540.9396311/94‑1 (MQ=60)

                                                         GAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGGTCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCT                                       <  SRR4302540.8113659/94‑1 (MQ=60)

                                                            AAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCG                                    >  SRR4302540.6077758/1‑94 (MQ=60)

                                                            AAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCG                                    >  SRR4302540.9741840/1‑94 (MQ=60)

                                                            AAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCG                                    >  SRR4302540.9369984/1‑94 (MQ=60)

                                                             AAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGC                                   >  SRR4302540.8535448/1‑94 (MQ=60)

                                                             AAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGC                                   <  SRR4302540.8579210/94‑1 (MQ=60)

                                                             AAAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGC                                   <  SRR4302540.51119/94‑1 (MQ=60)

                                                              AAGAAACCGCCCC‑GGCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAG                                 <  SRR4302540.9996631/94‑1 (MQ=60)

                                                              AAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCA                                  >  SRR4302540.2225244/1‑94 (MQ=60)

                                                              AAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCA                                  <  SRR4302540.327951/94‑1 (MQ=60)

                                                              AAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCA                                  <  SRR4302540.3583944/94‑1 (MQ=60)

                                                              AAGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCA                                  <  SRR4302540.1045487/94‑1 (MQ=60)

                                                               ATAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAG                                 <  SRR4302540.3703861/94‑1 (MQ=60)

                                                               AGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAG                                 <  SRR4302540.202432/94‑1 (MQ=60)

                                                               AGAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAG                                 <  SRR4302540.1097440/94‑1 (MQ=60)

                                                                GAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGG                                >  SRR4302540.4971835/1‑94 (MQ=60)

                                                                GAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACACAGCTGGAAAATCAGCATTTCAGCTTCGCACG                                >  SRR4302540.8079705/1‑94 (MQ=60)

                                                                AAAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGG                                <  SRR4302540.7236523/94‑1 (MQ=60)

                                                                 AAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGC                               <  SRR4302540.7926628/94‑1 (MQ=60)

                                                                 AAAACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGC                               >  SRR4302540.5894705/1‑94 (MQ=60)

                                                                   AACGCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAA                             >  SRR4302540.7505778/1‑94 (MQ=60)

                                                                      CCCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAG                          <  SRR4302540.2827154/94‑1 (MQ=60)

                                                                       CCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGT                         >  SRR4302540.1139469/1‑94 (MQ=60)

                                                                       CCCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGG                         >  SRR4302540.5372611/1‑94 (MQ=60)

                                                                        CCCTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGCAAATCAGCATTTCAGCTTCGCAGGCAAAAGTG                        >  SRR4302540.7230103/1‑94 (MQ=60)

                                                                          CTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAA                      >  SRR4302540.6243607/1‑94 (MQ=60)

                                                                          CTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAA                      <  SRR4302540.3305804/94‑1 (MQ=60)

                                                                          CTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAA                      <  SRR4302540.3305805/94‑1 (MQ=60)

                                                                          CTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAA                      >  SRR4302540.242490/1‑94 (MQ=60)

                                                                          CTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAA                      <  SRR4302540.5970733/94‑1 (MQ=60)

                                                                          CTGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGAATTTCAGCTTCGCAGGCAAAGGTGAA                      >  SRR4302540.242489/1‑94 (MQ=60)

                                                                           TGCCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAA                     >  SRR4302540.1758969/1‑94 (MQ=60)

                                                                             CCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATC                   >  SRR4302540.7131090/1‑94 (MQ=60)

                                                                             CCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATC                   <  SRR4302540.8470275/94‑1 (MQ=60)

                                                                             CCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATC                   <  SRR4302540.3499712/94‑1 (MQ=60)

                                                                             CCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATC                   >  SRR4302540.1896640/1‑94 (MQ=60)

                                                                             CCAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTGCAGCTTCGCAGGCAAAAGTGAAATC                   <  SRR4302540.3499711/94‑1 (MQ=60)

                                                                              CAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCACACGTGAAATCG                  >  SRR4302540.3156671/1‑94 (MQ=60)

                                                                              CAGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCG                  <  SRR4302540.2229148/94‑1 (MQ=60)

                                                                               AGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGA                 >  SRR4302540.1013913/1‑94 (MQ=60)

                                                                               AGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGA                 >  SRR4302540.10047205/1‑94 (MQ=60)

                                                                               AGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGA                 >  SRR4302540.8054652/1‑94 (MQ=60)

                                                                               AGCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTAAAATCGA                 >  SRR4302540.1888427/1‑94 (MQ=60)

                                                                                GCAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGAT                <  SRR4302540.4399981/94‑1 (MQ=60)

                                                                                 CAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATA               <  SRR4302540.3896232/94‑1 (MQ=60)

                                                                                 CAACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATA               <  SRR4302540.4607628/94‑1 (MQ=60)

                                                                                  AACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATAT              <  SRR4302540.8376787/94‑1 (MQ=60)

                                                                                  AACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATAT              >  SRR4302540.1638876/1‑94 (MQ=60)

                                                                                  AACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATAT              <  SRR4302540.2987981/94‑1 (MQ=60)

                                                                                  AACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATAT              >  SRR4302540.1638877/1‑94 (MQ=60)

                                                                                  AACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATAT              <  SRR4302540.8922879/94‑1 (MQ=60)

                                                                                  AACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATAT              <  SRR4302540.217410/94‑1 (MQ=60)

                                                                                   ACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATC             >  SRR4302540.6860171/1‑94 (MQ=60)

                                                                                   ACTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATC             <  SRR4302540.6223272/94‑1 (MQ=60)

                                                                                    CTGACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCC            >  SRR4302540.6189349/1‑94 (MQ=60)

                                                                                      GACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAG          <  SRR4302540.1380509/94‑1 (MQ=60)

                                                                                      GACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCCTCGCAGGCAAAAGTGAAATCGATATCCAG          <  SRR4302540.5303577/94‑1 (MQ=60)

                                                                                       ACAGGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGG         <  SRR4302540.3248707/94‑1 (MQ=60)

                                                                                        cagGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGC        >  SRR4302540.2153506/4‑94 (MQ=60)

                                                                                         agGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCG       <  SRR4302540.10059789/92‑1 (MQ=60)

                                                                                         agGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCG       <  SRR4302540.10059788/92‑1 (MQ=60)

                                                                                         agGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCG       >  SRR4302540.989418/3‑94 (MQ=60)

                                                                                         agGGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCG       >  SRR4302540.9928097/3‑94 (MQ=60)

                                                                                            GGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCAC    >  SRR4302540.4981892/1‑94 (MQ=60)

                                                                                            GGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCAC    >  SRR4302540.273856/1‑94 (MQ=60)

                                                                                             GG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACA   >  SRR4302540.3730444/1‑94 (MQ=60)

                                                                                              G‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACAC  >  SRR4302540.7055641/1‑94 (MQ=60)

TTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACA‑GGGG‑CGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACAC  >  NC_000913/2458557‑2458743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`