Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,460,909 |
(C)9→10 |
intergenic (+243/‑123) |
fadL → / → b2345 |
FadL/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,460,900 | 1 | . | C | 76.0%
| 495.4
/ 167.0
| 205 | intergenic (+234/‑132) | fadL/b2345 | FadL/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (18/31); new base C (87/68); total (106/99) |
| Fisher's exact test for biased strand distribution p-value = 2.17e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 259 total aligned reads displayed.
GTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTA > NC_000913/2460808‑2460991
|
gcaTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑t > 2:1587816/3‑93 (MQ=255)
gTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑t < 1:6381858/93‑1 (MQ=255)
gTATCCACAGACAAACCTGAAGGGAAAGGCATAGTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑t < 1:4219625/93‑1 (MQ=255)
tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑c > 1:1148018/1‑93 (MQ=255)
tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑c < 1:9500942/93‑1 (MQ=255)
aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cc < 2:772245/93‑1 (MQ=255)
tCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑ccc > 2:8208889/1‑93 (MQ=255)
acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccc < 2:8667357/93‑1 (MQ=255)
acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccc > 2:4292250/1‑93 (MQ=255)
acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccc > 1:4128235/1‑93 (MQ=255)
caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑ccccccc > 2:9771498/1‑93 (MQ=255)
aGACAAACCTGAAGGGAAAGGCAGATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccccc < 1:6072488/93‑1 (MQ=255)
aCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccccccc < 2:991111/93‑2 (MQ=255)
cAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccccccct < 2:2152270/93‑3 (MQ=255)
aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccccccctgg < 2:9930683/93‑5 (MQ=255)
aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑ccccccccccctg > 1:9787210/1‑89 (MQ=255)
ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑t > 1:571863/1‑93 (MQ=255)
cTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑tt > 2:723844/1‑92 (MQ=255)
tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TAt > 2:7974543/1‑93 (MQ=255)
tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TAt < 1:1771386/93‑1 (MQ=255)
aaGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TCGC‑TATtg > 1:8507690/1‑93 (MQ=255)
aGGTAAAGGCATATTTTCAGGCCTTTTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTCCATTTCCAGGA‑T‑C‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATtgt < 2:6421962/93‑1 (MQ=255)
aGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATtgt < 2:2044513/93‑1 (MQ=255)
ggtaaaGGCATTTTTTCAGGCGTTCTTCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATtgtg < 1:4322832/90‑1 (MQ=255)
gAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTgcgc < 1:5132976/93‑1 (MQ=255)
aaaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTgcgc > 2:1567710/1‑93 (MQ=255)
aGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCa < 1:9774662/93‑1 (MQ=255)
ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCa < 1:6205088/93‑1 (MQ=255)
atatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATac < 2:9977938/93‑1 (MQ=255)
tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑CGGC‑TATTGTGCGCTCATcca > 1:7598404/1‑93 (MQ=255)
tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATacac > 2:9207993/1‑93 (MQ=255)
ttttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGC‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGGGCTCATACACt > 2:934095/1‑93 (MQ=255)
taGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCaaa < 1:6912274/92‑1 (MQ=255)
cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCaaa < 2:5962594/93‑1 (MQ=255)
cggCGTTCTTCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑ACCC‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCaaa < 2:5320009/92‑1 (MQ=255)
aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑ACCC‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCaaa < 2:3176052/93‑1 (MQ=255)
ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTa > 2:7622361/1‑93 (MQ=255)
ttCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TCCCCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTAAAAATaaa > 2:4342614/1‑93 (MQ=255)
ttCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATCCACTCCAATTtaaa > 2:4129562/1‑92 (MQ=255)
tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCCATGGG‑TATTGTTCGCTCGTACAGTCAAGTTAACGa > 1:4870590/1‑93 (MQ=255)
tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGAt < 1:4845040/93‑1 (MQ=255)
gtGCTCGTACTTCTCAAAGAGTTTACTTGTCTGCATTTCCAGGA‑G‑A‑‑CGC‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGAt < 1:2804892/92‑1 (MQ=255)
tcTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAg < 1:1752179/92‑1 (MQ=255)
gCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAg > 2:8283327/1‑93 (MQ=255)
ctctTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGt < 1:4625644/93‑1 (MQ=255)
cTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAgg < 2:9020227/93‑1 (MQ=255)
tCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGt < 1:6947752/93‑1 (MQ=255)
tCGGCCTTCCCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑ACCC‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAgg < 2:7881931/93‑1 (MQ=255)
cGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGtt < 1:1299927/93‑1 (MQ=255)
gTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTc < 2:7051149/93‑1 (MQ=255)
gTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTc < 2:2334308/93‑1 (MQ=255)
gTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCt > 2:1731994/1‑93 (MQ=255)
gTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCt > 1:8779054/1‑93 (MQ=255)
tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATT‑C‑‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCt < 1:6749795/93‑1 (MQ=255)
tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCta > 1:7242253/1‑93 (MQ=255)
cTTCTCAAAAATTTTTCTTTTCTGCATTTCCAGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaa < 2:1910093/93‑1 (MQ=255)
ttCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTTTGCGCTCATACACTCAAATTAAAGATAGGTTTtaaa > 1:7468330/1‑93 (MQ=255)
ttCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaa > 2:2952702/1‑93 (MQ=255)
ttCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaa > 1:3172239/1‑93 (MQ=255)
cAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataaa < 2:5455885/93‑1 (MQ=255)
cAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataaa > 1:2072873/1‑93 (MQ=255)
aaaGAGTTTTCTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TCCCCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataaa < 1:988860/93‑1 (MQ=255)
aaaGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TCCCCCCCCCCC‑TGGC‑AATTGTGCGCCCTTCCACTGCAATTAAAGATAGATTCtaaataat > 1:4949799/1‑92 (MQ=255)
aaaGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat < 2:1432264/93‑1 (MQ=255)
aaaGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat < 2:1154255/93‑1 (MQ=255)
aaGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTTTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaata > 2:9254596/1‑92 (MQ=255)
agagTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTTTGCGCTCATACACTCAAATTAAAGATAGGTTTTAAATAAATGa > 2:814196/1‑93 (MQ=255)
agagTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGGTATGTGCTaaataaataa > 2:5802615/1‑91 (MQ=255)
gagTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg > 2:5120404/1‑93 (MQ=255)
gagTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg > 2:5728497/1‑93 (MQ=255)
agTTTACTTTTCTGCATTTCCAGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGc < 2:2764034/93‑1 (MQ=255)
gTTTACTTTTGTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCg < 1:9233892/93‑1 (MQ=255)
gTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TCCCCCCCCCCC‑CGCCTTTTTGTGCGCCCATACACTCAAATTAAAAATGGTTTTTAAATAAATGAg > 2:3411051/1‑93 (MQ=255)
tttACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGt > 1:8147653/1‑93 (MQ=255)
tttACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGt > 1:5882185/1‑93 (MQ=255)
tACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑GGGC‑ATTTGGGGGCCCAAACCCCCAAA‑TAAAGATAGGGTTTAAATAAAAGGACGtttt > 2:2805047/1‑93 (MQ=255)
tACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt > 1:7827177/1‑93 (MQ=255)
ttttGTGCATTTCCAGGA‑T‑C‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt < 1:2503263/93‑1 (MQ=255)
ttttCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt > 2:4458926/1‑93 (MQ=255)
ttCTGCATTTCCAGGA‑TCC‑‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 1:8392782/93‑1 (MQ=255)
ttCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 2:8473245/93‑1 (MQ=255)
tCTGCATTTCCAGGA‑T‑A‑‑CGC‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt < 2:9853284/93‑1 (MQ=255)
cTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAg < 2:4608966/93‑1 (MQ=255)
cATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTc < 1:1072790/93‑1 (MQ=255)
aTTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAACTTACCGCTGGGTTCTAAATAAATCAGGGTTTTTTGAAATTCt > 1:6258657/1‑93 (MQ=255)
tttCCCGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 2:6557580/93‑1 (MQ=255)
tttCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACCCTCAAATTAAAGATAGGTTCTAAATAAATAAGGGTTTTTTGATAGtttt > 2:8357586/1‑90 (MQ=255)
tttCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCtt > 2:4474642/1‑92 (MQ=255)
tttCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 2:5478547/93‑1 (MQ=255)
tttCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 2:3003061/93‑1 (MQ=255)
tttCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAt < 1:6014176/93‑1 (MQ=255)
ccAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCCTACACTCAAATTAAAAAAAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt > 2:6114847/1‑93 (MQ=255)
ccAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt < 1:6151995/93‑1 (MQ=255)
ccAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt > 1:2702186/1‑93 (MQ=255)
ccAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt > 1:1001249/1‑93 (MQ=255)
cAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑CATTTTGCGCTCATACACTCAAATTAAAAATAAGGTCTAAATAAAATAGGGTTTTTTTTTAGTTTAtttt > 2:67278/1‑92 (MQ=255)
aGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa > 1:3462800/1‑93 (MQ=255)
aGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 2:367525/93‑1 (MQ=255)
gA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAtt > 1:4472611/1‑93 (MQ=255)
t‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAgg > 1:5640375/1‑93 (MQ=255)
|
GTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTA > NC_000913/2460808‑2460991
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTG > NC_000913/2460816‑2461002
|
AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC < SRR4302540.6140004/94‑1 (MQ=60)
AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC > SRR4302540.619331/1‑94 (MQ=60)
AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CA‑‑CTCCCCC > SRR4302540.6970309/1‑94 (MQ=60)
AGACAAACCTGAAGGGAAAGGCAGATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC < SRR4302540.6140003/94‑1 (MQ=60)
GACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑T > SRR4302540.9432717/1‑94 (MQ=60)
AAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCcctg > SRR4302540.9901880/1‑90 (MQ=60)
AACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCccccc > SRR4302540.7408810/1‑89 (MQ=60)
ACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCT > SRR4302540.578073/1‑94 (MQ=60)
ACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCctggca > SRR4302540.4103405/1‑88 (MQ=60)
CCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTAT > SRR4302540.9278300/1‑94 (MQ=60)
CTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCctgccttt > SRR4302540.827131/1‑86 (MQ=60)
TGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATT < SRR4302540.1790602/94‑1 (MQ=60)
TGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATT < SRR4302540.1790603/94‑1 (MQ=60)
GAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TCGCTATTG > SRR4302540.8606566/1‑94 (MQ=60)
GAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCctgcctcttg > SRR4302540.8606565/1‑84 (MQ=60)
AGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCC‑CC‑‑CCCCCCC‑TGGCTATTGT < SRR4302540.7740012/94‑1 (MQ=60)
GGTAAAGGCATTTTTTCAGGCGTTCTTCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGC < SRR4302540.4369897/94‑1 (MQ=60)
GGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCcctggcttttttg > SRR4302540.8228262/1‑81 (MQ=60)
GGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCcccgcctcttgtg > SRR4302540.5481230/1‑81 (MQ=60)
GGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGTA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCG > SRR4302540.4898993/1‑94 (MQ=60)
GAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT < SRR4302540.5188566/94‑1 (MQ=60)
AAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCccctgcccttgtgggt > SRR4302540.7403609/1‑78 (MQ=60)
AAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑C < SRR4302540.3396559/94‑1 (MQ=60)
AGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CA > SRR4302540.9740254/1‑94 (MQ=60)
AGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CAT < SRR4302540.9889246/94‑1 (MQ=60)
AGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑CGGCTATTttgggcccat > SRR4302540.2400523/1‑84 (MQ=60)
GGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CAT < SRR4302540.6274153/94‑1 (MQ=60)
GCATATTTTCCGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCCTTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑AC‑‑CCCCCCCcgtgcctttttgccgccctc > SRR4302540.7711308/1‑74 (MQ=60)
ATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACC > SRR4302540.8727301/1‑94 (MQ=60)
ATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACA > SRR4302540.7683778/1‑94 (MQ=60)
ATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑CGGCTATTGTGCGCT‑CATCCA > SRR4302540.7683779/1‑94 (MQ=60)
ATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCccctggctattgggcgcccctc > SRR4302540.1709336/1‑72 (MQ=60)
ATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCccctcccccttttcactcacgt > SRR4302540.3768027/1‑72 (MQ=60)
TATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACT > SRR4302540.5136487/1‑94 (MQ=60)
ATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑C‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTC < SRR4302540.4943616/94‑1 (MQ=60)
ATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACT < SRR4302540.4642217/94‑1 (MQ=60)
TTTCAGGCGTTCTGCTCGTCCTTCTGAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCctggccttgttcgccctaaccaccca > SRR4302540.9058630/1‑68 (MQ=60)
tcaggctttttccccgcCCTTCTAAAAGATTTTCCTTTTCGGCATTTCCAGGA‑T‑‑C‑‑C‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAAT < SRR4302540.2342404/77‑1 (MQ=58)
TAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAAT < SRR4302540.6989193/94‑1 (MQ=60)
CAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTTCTTTTCTGCATTTCCAGGA‑TC‑C‑‑C‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAAT < SRR4302540.6839817/94‑1 (MQ=60)
TGGCGTTCTGCTCCCCCTTCTCAAAGAGTTTTCTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCC‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAAT < SRR4302540.2419971/94‑1 (MQ=60)
gcgtggtTGCTCGTCCCTCTCAAAGAGTTTACTTTGCTGCATTTCACGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTA < SRR4302540.305992/87‑1 (MQ=60)
GGCGTTCTTCTCCTTCTTTTTAAAGAGTTTTCTTTTCTGGATTTCCAGGA‑T‑‑ACCC‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATT < SRR4302540.7177167/94‑1 (MQ=50)
GCGTTCTGCTCGTCCTTCTCAAAGGGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCCCCC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATT < SRR4302540.4454362/94‑1 (MQ=60)
CGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCctgcccattttcggctcataccctcaattaaaa > SRR4302540.8505968/1‑61 (MQ=60)
GTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAG < SRR4302540.1100362/94‑1 (MQ=60)
GTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAG > SRR4302540.3536477/1‑94 (MQ=60)
GTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAA > SRR4302540.2061091/1‑94 (MQ=60)
GTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCCCT‑CATCCACTCAAATTAAAA > SRR4302540.7478868/1‑94 (MQ=60)
TTCTTCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCC‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAG < SRR4302540.6408319/94‑1 (MQ=60)
TTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCATGGGTATTGTTCGCT‑CGTACAGTCAAGTTAACGA > SRR4302540.4922840/1‑94 (MQ=60)
GTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑T‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGA < SRR4302540.6643544/94‑1 (MQ=60)
TCTGCTCGTCCTTCTCAAAGAGTTTGCTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCC‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGA < SRR4302540.6392752/94‑1 (MQ=60)
TCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGAT < SRR4302540.487573/94‑1 (MQ=60)
TCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATA < SRR4302540.4896943/94‑1 (MQ=60)
ctgcgcgtcctttcaAAAGAGTTTCCTTTTCGGCATTTCCAGGA‑T‑‑ACCC‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGAT < SRR4302540.5575778/79‑1 (MQ=60)
GTGCTCGTACTTCTCAAAGAGTTTACTTGTCTGCATTTCCAGGA‑G‑‑A‑‑CGC‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATA < SRR4302540.2835186/94‑1 (MQ=60)
CTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCcctgctttttggtccccctcaccaccaaatcaaacaa > SRR4302540.9555487/1‑57 (MQ=60)
CTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑AC‑‑CCCCCCCatggctcttgtgccctcaatctctaaaataaaagctg > SRR4302540.9915447/1‑57 (MQ=60)
CTGCCCTTCCTTCTCAAATATTTTACTTTTCTGCATTTCCAGGA‑TCCC‑‑C‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGAT < SRR4302540.5575777/94‑1 (MQ=60)
TCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑AC‑C‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGG < SRR4302540.1771160/94‑1 (MQ=60)
GCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGG < SRR4302540.10037863/94‑1 (MQ=60)
GCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGG < SRR4302540.4687343/94‑1 (MQ=60)
GCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGG < SRR4302540.4310226/94‑1 (MQ=60)
CTCTTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTT < SRR4302540.4675208/94‑1 (MQ=60)
TCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGC‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTT > SRR4302540.10146980/1‑94 (MQ=60)
TCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTT < SRR4302540.7025072/94‑1 (MQ=60)
TCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCctcgctctcgtgcgcccacaaaatcaacttaaacaaagggt > SRR4302540.5804106/1‑53 (MQ=60)
TCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTC > SRR4302540.7447771/1‑94 (MQ=60)
CGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCC‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTT < SRR4302540.9893276/94‑1 (MQ=60)
CGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTC > SRR4302540.4979542/1‑94 (MQ=60)
CGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTC < SRR4302540.1313401/94‑1 (MQ=60)
CGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCT > SRR4302540.8880711/1‑94 (MQ=60)
GTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCcctgctcttggtctgtcttacactcaaactaaaaaatgcctct > SRR4302540.7607266/1‑51 (MQ=60)
GTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCcctgctcttcgcccccagacaactcaatttaagataggttcca > SRR4302540.7607265/1‑51 (MQ=60)
GTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTA > SRR4302540.7323038/1‑94 (MQ=60)
TCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATT‑‑C‑‑C‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTA < SRR4302540.6824371/94‑1 (MQ=60)
CTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑ACCC‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAA < SRR4302540.5831154/94‑1 (MQ=60)
CTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCC‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAA > SRR4302540.1753382/1‑94 (MQ=60)
CTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTTTGCGCT‑CATACACTCAAATTAAAGATAGGTTTTAAA > SRR4302540.7551649/1‑94 (MQ=60)
CTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAA > SRR4302540.3206725/1‑94 (MQ=60)
TTCTCAAAGAGTTTCCTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAAT < SRR4302540.5729274/94‑1 (MQ=60)
TCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATA < SRR4302540.3171198/94‑1 (MQ=60)
CTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCC‑CC‑‑CCCCCCC‑TGGCTCTTGTGGCCT‑CATACACTCAAATTAAAAATGGGTTTTAAATA > SRR4302540.714505/1‑94 (MQ=60)
CTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCctggcattgtgcggccctaaactcaaaatcaaaaaaaggtttaaataaa > SRR4302540.4080130/1‑45 (MQ=60)
TCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAA > SRR4302540.2095162/1‑94 (MQ=60)
CAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCC‑CC‑‑CCCCCCC‑TGGCAATTGTGCGCC‑CTTCCACTGCAATTAAAGATAGATTCTAAATAAT > SRR4302540.5003276/1‑94 (MQ=50)
AAAGAGTTTTCTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCC‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAAT < SRR4302540.998957/94‑1 (MQ=60)
AAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TCC‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGTTAGGTTCTAAATAAATG > SRR4302540.4603226/1‑94 (MQ=60)
AGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGC < SRR4302540.6998399/94‑1 (MQ=60)
GAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑AC‑C‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGC < SRR4302540.1256495/94‑1 (MQ=60)
AAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGC < SRR4302540.7294092/94‑1 (MQ=60)
AGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCG < SRR4302540.9249393/94‑1 (MQ=60)
AGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCCATTGTCCGCT‑AATACACTCAAATTAAAatcagcttttaaaaaaatgagct > SRR4302540.2523392/1‑71 (MQ=60)
AGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCctcggctattttggctcccaatctcccaataaaaaaaagatatttaaataaaatat > SRR4302540.8911202/1‑38 (MQ=60)
GTTTACTTTTGTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGT < SRR4302540.9344546/94‑1 (MQ=60)
GTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGT > SRR4302540.9694846/1‑94 (MQ=60)
GTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGT > SRR4302540.8242233/1‑94 (MQ=60)
GTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGT > SRR4302540.5947189/1‑94 (MQ=60)
GTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCcctgcccattttgcgcccttcccccaaaattaaaataaggttttaaaaaaataacag > SRR4302540.577674/1‑37 (MQ=60)
TTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TCGCTATTTTGCGCT‑CATcccctcaaataaaaaacaagtttttaaaaaaaaaaagctt > SRR4302540.3791210/1‑54 (MQ=44)
TTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTT < SRR4302540.7846676/94‑1 (MQ=60)
TTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTT > SRR4302540.7918647/1‑94 (MQ=60)
TTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTT > SRR4302540.6058353/1‑94 (MQ=60)
TACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACCCTCAAATTAAAGTAAGGTTCTAAATAATTAAGGGTTTT > SRR4302540.6110175/1‑94 (MQ=60)
TACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTT < SRR4302540.2781645/94‑1 (MQ=60)
TACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTT < SRR4302540.4262061/94‑1 (MQ=60)
CTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACCCAAATTAAAAATAGGTTTTAAATAAATAAGCGTTTTTT > SRR4302540.5923201/1‑94 (MQ=60)
CTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCCcgttgtctttggcgctccaacactccacttcacaataaggtctgaataaattaaggtttttt > SRR4302540.31937/1‑32 (MQ=60)
TTTTGTGCATTTCCAGGA‑T‑‑C‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTG < SRR4302540.2530278/94‑1 (MQ=60)
TTCTGCATTTCCAGGA‑TC‑C‑‑C‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAT < SRR4302540.8490182/94‑1 (MQ=60)
CTGCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAT > SRR4302540.3228346/1‑94 (MQ=60)
GCATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTC < SRR4302540.604608/94‑1 (MQ=60)
CATTTCCAGGA‑T‑‑T‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCT < SRR4302540.8544249/94‑1 (MQ=60)
CATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAACTTACCGCTGGGTTCTAAATAAATCAGGGTTTTTTGAAATTCT > SRR4302540.6328293/1‑94 (MQ=44)
CATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCT < SRR4302540.1083738/94‑1 (MQ=60)
CATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCT < SRR4302540.207912/94‑1 (MQ=60)
ATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGGCCC‑CTTATACTCAAATTAAAGAAAGGTTTTAATTAAATGAGCGTTTTTTaatcgtctt > SRR4302540.8710122/1‑85 (MQ=31)
ATTTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGttagtttt > SRR4302540.8392395/1‑86 (MQ=60)
TTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATT < SRR4302540.6080870/94‑1 (MQ=60)
TTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATTAGCGGTTTTTGATAGTCTATT > SRR4302540.7628509/1‑94 (MQ=60)
TTCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑GGGTTATTGGGGGCT‑CAGACACTCAAATTAAAGATGGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTTTT > SRR4302540.3641520/1‑94 (MQ=56)
TCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTT > SRR4302540.1011421/1‑94 (MQ=60)
TCCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTT > SRR4302540.2731341/1‑94 (MQ=60)
CCAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTC < SRR4302540.6220518/94‑1 (MQ=60)
CAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGC‑ATTTTGGCCTCCATACACTCAAATTAAAATTAGGTTCTAAATAAATGAGCGTTTTTTGATAGattttttct > SRR4302540.2941300/1‑85 (MQ=35)
AAGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCA > SRR4302540.3500496/1‑94 (MQ=60)
AGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT > SRR4302540.6279544/1‑94 (MQ=60)
AGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT > SRR4302540.6279259/1‑94 (MQ=60)
AGGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT < SRR4302540.1386113/94‑1 (MQ=60)
catttcccgggaacccCC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCT < SRR4302540.6829527/78‑1 (MQ=60)
GGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGGGTTTTTTGATAGTCTATTTCCTT > SRR4302540.792627/1‑94 (MQ=60)
GGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATT < SRR4302540.6223740/94‑1 (MQ=60)
GGA‑T‑‑A‑‑C‑TC‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATT > SRR4302540.4521120/1‑94 (MQ=60)
A‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGG > SRR4302540.5702458/1‑94 (MQ=60)
tgcaggattcacCC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTT < SRR4302540.6601293/82‑1 (MQ=60)
A‑‑C‑T‑‑‑CCCACCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGG > SRR4302540.4570819/1‑94 (MQ=60)
C‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAA < SRR4302540.8119452/94‑1 (MQ=60)
C‑C‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAA < SRR4302540.10134890/94‑1 (MQ=60)
ctcCC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACCCTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTA > SRR4302540.6384294/4‑94 (MQ=60)
cccCC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTA < SRR4302540.1710639/91‑1 (MQ=60)
CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATA < SRR4302540.6615949/94‑1 (MQ=60)
C‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATAT > SRR4302540.7193511/1‑94 (MQ=60)
CCCCCCC‑TGGCTATTGTGCGTT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTCTTGAGAGTCTATATCATTAGGTAATATA > SRR4302540.9033385/1‑94 (MQ=60)
CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATA > SRR4302540.2804888/1‑94 (MQ=60)
CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATA < SRR4302540.2579764/94‑1 (MQ=60)
CCTCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATA < SRR4302540.3286781/94‑1 (MQ=60)
CCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATA > SRR4302540.8953385/1‑94 (MQ=60)
CCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATT > SRR4302540.9072515/1‑94 (MQ=60)
CCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATT > SRR4302540.9529427/1‑94 (MQ=60)
CCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATT > SRR4302540.5260716/1‑94 (MQ=60)
CCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATT > SRR4302540.7305830/1‑94 (MQ=60)
CC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTT < SRR4302540.7304019/94‑1 (MQ=60)
CC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTT > SRR4302540.6248523/1‑94 (MQ=60)
C‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTG > SRR4302540.590413/1‑94 (MQ=60)
C‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTG > SRR4302540.6654555/1‑94 (MQ=60)
C‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTG > SRR4302540.10012650/1‑94 (MQ=60)
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AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑‑A‑‑C‑T‑‑‑CC‑‑CCCCCCC‑TGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTG > NC_000913/2460816‑2461002
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
