Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,463,325	A→G	D2G (GAC→GGC)	yfdC →	putative transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,463,325	0	A	G	94.1%	901.6 / 33.5	321	D2G (GAC→GGC)	yfdC	putative transport
Reads supporting (aligned to +/- strand): ref base A (9/10); new base G (132/169); total (141/180)
Fisher's exact test for biased strand distribution p-value = 8.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.69e-01

Only 100 of 330 total aligned reads displayed.

TCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACC  >  NC_000913/2463235‑2463414

  tACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAAc                                                                                       <  1:645996/93‑1 (MQ=255)

      ttttCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACa                                                                                   >  2:7796424/1‑93 (MQ=255)

      ttttCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACa                                                                                   >  2:2625027/1‑93 (MQ=255)

         tCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACaaaa                                                                                <  2:6686083/93‑1 (MQ=255)

          cAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAAt                                                                               <  1:7492989/93‑1 (MQ=255)

           agagTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAAtt                                                                              >  1:8682729/1‑93 (MQ=255)

           agagTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAAtt                                                                              <  1:681905/93‑1 (MQ=255)

            gagTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTg                                                                             >  1:8543570/1‑93 (MQ=255)

              gTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGAt                                                                           >  2:4566274/1‑93 (MQ=255)

                aaCTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCa                                                                         <  1:9999324/93‑1 (MQ=255)

                 aCTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCaa                                                                        >  2:368741/1‑93 (MQ=255)

                 aCTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCaa                                                                        <  1:4208616/93‑1 (MQ=255)

                  cTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAac                                                                       >  2:7317109/1‑93 (MQ=255)

                   tCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAaca                                                                      >  1:1534958/1‑93 (MQ=255)

                    cccGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAacac                                                                     <  2:884152/93‑1 (MQ=255)

                    cccGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAacac                                                                     <  2:4234913/93‑1 (MQ=255)

                      cGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAg                                                                   >  1:1089137/1‑93 (MQ=255)

                      cGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAg                                                                   >  2:9288969/1‑93 (MQ=255)

                        tCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACAGAGcg                                                                 <  2:6493144/93‑1 (MQ=255)

                        tCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGcg                                                                 >  1:4888773/1‑93 (MQ=255)

                        tCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGcg                                                                 >  2:9460263/1‑93 (MQ=255)

                         cAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGcga                                                                >  2:1824806/1‑93 (MQ=255)

                           gTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGcgacg                                                              >  1:8160520/1‑93 (MQ=255)

                              gCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGaaa                                                           <  2:8996374/93‑1 (MQ=255)

                              gCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGACTAACACAGcgacgcat                                                           >  1:8387420/1‑90 (MQ=255)

                               cGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAAt                                                          <  1:7559302/93‑1 (MQ=255)

                               cGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAAt                                                          <  1:409313/93‑1 (MQ=255)

                                gAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAAtt                                                         >  2:3002564/1‑93 (MQ=255)

                                gAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAAtt                                                         >  2:3591614/1‑93 (MQ=255)

                                gAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAAtt                                                         <  2:7039901/93‑1 (MQ=255)

                                gAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAANNGATCAACACAGCGACGAANtt                                                         >  1:781405/1‑93 (MQ=255)

                                  gCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGa                                                       <  1:2317336/93‑1 (MQ=255)

                                  gCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGa                                                       >  2:7901740/1‑93 (MQ=255)

                                    aaaaaaGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAg                                                     <  1:5448716/93‑1 (MQ=255)

                                    aaaaaaGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAg                                                     >  2:5016879/1‑93 (MQ=255)

                                     aaaaaGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGt                                                    <  1:1411179/93‑1 (MQ=255)

                                      aaaaGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGtt                                                   <  2:53954/93‑1 (MQ=255)

                                        aaGCCGCTACGCTTTAGCTATACGTGCTAATTCAATAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTga                                                 >  1:1848409/1‑93 (MQ=255)

                                        aaGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTga                                                 <  2:2463246/93‑1 (MQ=255)

                                         aGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTgag                                                <  1:2406295/93‑1 (MQ=255)

                                         aGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTgag                                                <  1:9904681/93‑1 (MQ=255)

                                          gCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGACGTTgaga                                               >  2:4813513/1‑93 (MQ=255)

                                           ccGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGagag                                              >  2:9747955/1‑93 (MQ=255)

                                            cgcgACGCTTTAGATATACGTTCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGc                                             <  1:6204704/93‑1 (MQ=255)

                                            cGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGc                                             <  2:3371107/93‑1 (MQ=255)

                                              cTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCga                                           <  1:8906460/93‑1 (MQ=255)

                                               tACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCgaa                                          <  1:3093279/93‑1 (MQ=255)

                                               tACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCgaa                                          >  1:3477588/1‑93 (MQ=255)

                                               tACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCgaa                                          >  2:6318239/1‑93 (MQ=255)

                                                  gCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCgaagaa                                       <  1:4481215/93‑1 (MQ=255)

                                                   cTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGaaa                                      <  2:1753829/93‑1 (MQ=255)

                                                    tttAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGaaaa                                     <  1:5108058/93‑1 (MQ=255)

                                                     ttAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGaaaaa                                    <  1:2171975/93‑1 (MQ=255)

                                                       aGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAaga                                  <  2:1037218/93‑1 (MQ=255)

                                                       aGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAaga                                  >  2:5931760/1‑93 (MQ=255)

                                                       aGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAaga                                  <  1:8192087/93‑1 (MQ=255)

                                                        gCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAagag                                 <  2:3852726/93‑1 (MQ=255)

                                                         cTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAgc                                >  2:3135562/1‑93 (MQ=255)

                                                         cTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAgc                                >  1:1708399/1‑93 (MQ=255)

                                                           ataCGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAgcgc                              >  1:3201095/1‑93 (MQ=255)

                                                            taCGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGcgcg                             >  1:1181066/1‑93 (MQ=255)

                                                            taCGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGcgcg                             <  1:6042646/93‑1 (MQ=255)

                                                            taCGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGcgcg                             <  1:9553083/93‑1 (MQ=255)

                                                                 gCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCaaa                        >  1:7404495/1‑93 (MQ=255)

                                                                  cTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCaaaa                       >  1:329909/1‑93 (MQ=255)

                                                                   tAATTCAAGAGAAGAGACCATGGTCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCaaaaa                      <  2:5517380/93‑1 (MQ=255)

                                                                   tAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCaaaaa                      >  2:1455138/1‑93 (MQ=255)

                                                                   tAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCaaaaa                      <  2:3413757/93‑1 (MQ=255)

                                                                    aaTTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGCGAGCGAAGAAAAAGAGAGCGTCaaaaaa                     >  1:6172263/1‑93 (MQ=255)

                                                                    aaTTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCaaaaaa                     >  1:9019836/1‑93 (MQ=255)

                                                                     aTTCAAGAGAAGAGACCATGGGCAACGACAAAAATGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCaaaaaaa                    <  1:9726532/93‑1 (MQ=255)

                                                                        cAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaatag                 >  2:166217/1‑93 (MQ=255)

                                                                         aagagaagagACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaataga                <  1:2642687/93‑1 (MQ=255)

                                                                         aagagaagagACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaataga                >  2:2820991/1‑93 (MQ=255)

                                                                          agagaagagaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaatagaa               >  1:9814587/1‑93 (MQ=255)

                                                                          agagaagagaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaatagaa               <  1:7695792/93‑1 (MQ=255)

                                                                           gagaagagaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaatagaaa              <  2:7698205/93‑1 (MQ=255)

                                                                             gaagagaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaatagaaata            >  2:754277/1‑93 (MQ=255)

                                                                             gaagagaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaatagaaata            <  2:5192746/93‑1 (MQ=255)

                                                                              aagagaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAaaatagaaatag           <  2:1129477/93‑1 (MQ=255)

                                                                               agagaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAaatagaaataga          <  1:3893184/93‑1 (MQ=255)

                                                                                gagaCCATGGGCAACGACAAAATTGATCAACACAGCGACGCAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGAt         >  1:91842/1‑93 (MQ=255)

                                                                                  gaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGa       <  1:8560796/93‑1 (MQ=255)

                                                                                  gaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGa       <  1:3615611/93‑1 (MQ=255)

                                                                                  gaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGa       >  2:4364808/1‑93 (MQ=255)

                                                                                  gaCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGa       <  2:409357/93‑1 (MQ=255)

                                                                                   aCCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGaa      <  2:1350861/93‑1 (MQ=255)

                                                                                    ccATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAg     <  1:4424979/93‑1 (MQ=255)

                                                                                    ccATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAg     <  1:5857359/93‑1 (MQ=255)

                                                                                    ataTGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAg     <  2:2214472/91‑1 (MQ=255)

                                                                                     cATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGa    <  2:8235715/93‑1 (MQ=255)

                                                                                     cATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGa    <  1:6981330/93‑1 (MQ=255)

                                                                                     cATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGa    <  1:9390475/93‑1 (MQ=255)

                                                                                     cATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGAGGAAGa    <  2:4054209/93‑1 (MQ=255)

                                                                                      aTGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGAc   <  2:8396577/93‑1 (MQ=255)

                                                                                       tGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGAcc  >  1:6700509/1‑93 (MQ=255)

                                                                                       tGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGAcc  <  2:253148/93‑1 (MQ=255)

                                                                                       tGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGAcc  >  2:9123788/1‑93 (MQ=255)

                                                                                       tGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGAcc  <  1:6895746/93‑1 (MQ=255)

                                                                                       tGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGAcc  >  2:1257999/1‑93 (MQ=255)

TCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACC  >  NC_000913/2463235‑2463414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGAC  >  NC_000913/2463232‑2463417

TTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGG                                                                                              >  SRR4302540.2021297/1‑94 (MQ=60)

TTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGC‑AAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGC                                                                                             <  SRR4302540.5338111/94‑1 (MQ=60)

TTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGC‑AAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGC                                                                                             <  SRR4302540.5338110/94‑1 (MQ=60)

  TTCTACATTTTCAGAGTACCTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCA                                                                                            <  SRR4302540.6766084/94‑1 (MQ=60)

  TTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCA                                                                                            >  SRR4302540.4954652/1‑94 (MQ=60)

  TTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCA                                                                                            <  SRR4302540.1567383/94‑1 (MQ=60)

  TTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCA                                                                                            <  SRR4302540.13423/94‑1 (MQ=60)

  TTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCA                                                                                            <  SRR4302540.3098552/94‑1 (MQ=60)

     TACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACG                                                                                         <  SRR4302540.652879/94‑1 (MQ=60)

       CATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGAC                                                                                       >  SRR4302540.5210788/1‑94 (MQ=60)

       CATTTCCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGAC                                                                                       <  SRR4302540.92425/94‑1 (MQ=60)

        ATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCGACGACA                                                                                      >  SRR4302540.689963/1‑94 (MQ=60)

        ATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACA                                                                                      >  SRR4302540.2306856/1‑94 (MQ=60)

             CAGAGTAGCTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATT                                                                                 <  SRR4302540.3544030/94‑1 (MQ=60)

             CAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACCAAATT                                                                                 >  SRR4302540.7699786/1‑94 (MQ=60)

             CAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATT                                                                                 <  SRR4302540.7576664/94‑1 (MQ=60)

             CAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATT                                                                                 >  SRR4302540.4829136/1‑94 (MQ=60)

             CAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATT                                                                                 >  SRR4302540.8783562/1‑94 (MQ=60)

             CAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCCCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAACATT                                                                                 >  SRR4302540.7154048/1‑94 (MQ=60)

              AGATTAACCCCCGTCAGTGGCTAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTG                                                                                <  SRR4302540.4556844/94‑1 (MQ=60)

              AGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTG                                                                                <  SRR4302540.689212/94‑1 (MQ=60)

              AGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTG                                                                                <  SRR4302540.4556845/94‑1 (MQ=60)

              AGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTG                                                                                >  SRR4302540.8642833/1‑94 (MQ=60)

               GAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGA                                                                               <  SRR4302540.9838370/94‑1 (MQ=60)

               GAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGA                                                                               >  SRR4302540.9627207/1‑94 (MQ=60)

               GAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGA                                                                               >  SRR4302540.174253/1‑94 (MQ=60)

               GAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGA                                                                               >  SRR4302540.2473808/1‑94 (MQ=60)

                AGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGAT                                                                              >  SRR4302540.4145996/1‑94 (MQ=60)

                 GTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATC                                                                             <  SRR4302540.526745/94‑1 (MQ=60)

                 GTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATC                                                                             >  SRR4302540.3328847/1‑94 (MQ=60)

                 GTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATC                                                                             >  SRR4302540.9451973/1‑94 (MQ=60)

                  TAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCA                                                                            >  SRR4302540.6976402/1‑94 (MQ=60)

                   AACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAA                                                                           <  SRR4302540.8928715/94‑1 (MQ=60)

                   AACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAA                                                                           <  SRR4302540.10115822/94‑1 (MQ=60)

                   AACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAA                                                                           <  SRR4302540.3201821/94‑1 (MQ=60)

                    ACTCCCGTCAGTTGCGAGCAAAAAAGTCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAAC                                                                          <  SRR4302540.8700271/94‑1 (MQ=60)

                    ACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAAC                                                                          <  SRR4302540.3712748/94‑1 (MQ=60)

                    ACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAAC                                                                          <  SRR4302540.4254433/94‑1 (MQ=60)

                    ACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAAC                                                                          >  SRR4302540.158813/1‑94 (MQ=60)

                    ACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAAC                                                                          >  SRR4302540.2871760/1‑94 (MQ=60)

                     CTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGGGACCATGGGCAACGACAAAATTGATCAACA                                                                         >  SRR4302540.6997736/1‑94 (MQ=60)

                     CTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACA                                                                         >  SRR4302540.1551941/1‑94 (MQ=60)

                      TCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACAC                                                                        >  SRR4302540.1656048/1‑94 (MQ=60)

                      TCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACAC                                                                        <  SRR4302540.3559685/94‑1 (MQ=60)

                      TCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACAC                                                                        <  SRR4302540.7638259/94‑1 (MQ=60)

                        CCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAG                                                                      <  SRR4302540.1342900/94‑1 (MQ=60)

                        CCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAG                                                                      >  SRR4302540.1100316/1‑94 (MQ=60)

                        CCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAG                                                                      <  SRR4302540.7608319/94‑1 (MQ=60)

                         CGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGC                                                                     >  SRR4302540.2201330/1‑94 (MQ=60)

                         CGTCAGTTACAAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGCCCATGGGCAACGACAAAATTGATCAACACAGC                                                                     <  SRR4302540.4028988/94‑1 (MQ=60)

                          GTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCG                                                                    >  SRR4302540.4941322/1‑94 (MQ=60)

                          GTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCG                                                                    >  SRR4302540.8256612/1‑94 (MQ=60)

                           TCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGA                                                                   <  SRR4302540.3759368/94‑1 (MQ=60)

                             AGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACG                                                                 <  SRR4302540.939070/94‑1 (MQ=60)

                             AGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACG                                                                 >  SRR4302540.8255278/1‑94 (MQ=60)

                             AGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACG                                                                 >  SRR4302540.8255279/1‑94 (MQ=60)

                               TTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAA                                                               >  SRR4302540.7806725/1‑94 (MQ=60)

                                TGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGACTAACACAGCGACGcat                                                              >  SRR4302540.8484737/1‑91 (MQ=60)

                                 GCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAAT                                                             >  SRR4302540.9239856/1‑94 (MQ=60)

                                 GCGAGCAAAAAACCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAAT                                                             <  SRR4302540.3173333/94‑1 (MQ=60)

                                  CGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATT                                                            <  SRR4302540.413594/94‑1 (MQ=60)

                                  CGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATT                                                            <  SRR4302540.7644077/94‑1 (MQ=60)

                                  CGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATT                                                            <  SRR4302540.7644078/94‑1 (MQ=60)

                                  CGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATT                                                            <  SRR4302540.8206804/94‑1 (MQ=60)

                                  CGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAANNGATCAACACAGCGACGAANTT                                                            >  SRR4302540.789727/1‑94 (MQ=60)

                                   GAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTG                                                           <  SRR4302540.4496200/94‑1 (MQ=60)

                                   GAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGAGCAACGACAAAATTGATCAACACAGCGACGAAATTG                                                           <  SRR4302540.7051841/94‑1 (MQ=60)

                                    AGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGA                                                          >  SRR4302540.6878426/1‑94 (MQ=60)

                                     GCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAA                                                         <  SRR4302540.2342283/94‑1 (MQ=60)

                                     GCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAA                                                         <  SRR4302540.1164806/94‑1 (MQ=60)

                                      CAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAG                                                        <  SRR4302540.8436848/94‑1 (MQ=60)

                                      CAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAG                                                        <  SRR4302540.6074617/94‑1 (MQ=60)

                                      CAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAG                                                        <  SRR4302540.4976103/94‑1 (MQ=60)

                                      CAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAG                                                        <  SRR4302540.6810536/94‑1 (MQ=60)

                                      CAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAG                                                        <  SRR4302540.6074616/94‑1 (MQ=60)

                                       AAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGT                                                       <  SRR4302540.5508672/94‑1 (MQ=60)

                                       AAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGT                                                       <  SRR4302540.6307634/94‑1 (MQ=60)

                                       AAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGT                                                       >  SRR4302540.8402017/1‑94 (MQ=60)

                                        AAAAAGCCGCTTCGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACATCGACGAAATTGAAGTT                                                      >  SRR4302540.9034932/1‑94 (MQ=60)

                                        AAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTT                                                      <  SRR4302540.1426393/94‑1 (MQ=60)

                                        AAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTT                                                      <  SRR4302540.2747774/94‑1 (MQ=60)

                                        AAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTT                                                      <  SRR4302540.3242998/94‑1 (MQ=60)

                                         AAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTG                                                     <  SRR4302540.759277/94‑1 (MQ=60)

                                          AAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAATAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGA                                                    >  SRR4302540.1868686/1‑94 (MQ=60)

                                           AAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAG                                                   <  SRR4302540.9702257/94‑1 (MQ=60)

                                           AAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAG                                                   <  SRR4302540.4165570/94‑1 (MQ=60)

                                           AAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAG                                                   <  SRR4302540.551127/94‑1 (MQ=60)

                                            AGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGA                                                  <  SRR4302540.10020396/94‑1 (MQ=60)

                                            AGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGA                                                  <  SRR4302540.2432240/94‑1 (MQ=60)

                                            AGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGA                                                  <  SRR4302540.1869779/94‑1 (MQ=60)

                                            AGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGG                                                  >  SRR4302540.8769618/1‑94 (MQ=60)

                                            AGCCGCTACGCTTTAGCTATACATGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGA                                                  <  SRR4302540.1303014/94‑1 (MQ=60)

                                               CGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCG                                               >  SRR4302540.903398/1‑94 (MQ=60)

                                               CGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCG                                               <  SRR4302540.1878612/94‑1 (MQ=60)

                                               CGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCG                                               <  SRR4302540.6273768/94‑1 (MQ=60)

                                               CGCGACGCTTTAGATATACGTTCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCG                                               <  SRR4302540.6273767/94‑1 (MQ=60)

                                                 CTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAA                                             >  SRR4302540.3515454/1‑94 (MQ=60)

                                                 CTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAA                                             >  SRR4302540.2363813/1‑94 (MQ=60)

                                                 CTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAA                                             >  SRR4302540.2238645/1‑94 (MQ=60)

                                                 CTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAA                                             >  SRR4302540.10000692/1‑94 (MQ=60)

                                                 CTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAA                                             <  SRR4302540.9009583/94‑1 (MQ=60)

                                                  TACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAG                                            <  SRR4302540.3127198/94‑1 (MQ=60)

                                                   ACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGA                                           <  SRR4302540.8627664/94‑1 (MQ=60)

                                                    CGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAA                                          <  SRR4302540.10032169/94‑1 (MQ=60)

                                                    CGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAA                                          >  SRR4302540.2371092/1‑94 (MQ=60)

                                                     GCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAA                                         <  SRR4302540.4529813/94‑1 (MQ=60)

                                                      CTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAA                                        >  SRR4302540.9641017/1‑94 (MQ=60)

                                                       TTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAA                                       <  SRR4302540.5163351/94‑1 (MQ=60)

                                                       TTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAA                                       >  SRR4302540.9550333/1‑94 (MQ=60)

                                                       TTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAA                                       <  SRR4302540.5514897/94‑1 (MQ=60)

                                                       TTTAGCTATACGTGCAAATACAAGAGAAAAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGCGCGAAGAAAAA                                       <  SRR4302540.9046237/94‑1 (MQ=60)

                                                        TTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAG                                      <  SRR4302540.8654811/94‑1 (MQ=60)

                                                        TTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAG                                      <  SRR4302540.2195397/94‑1 (MQ=60)

                                                        TTAGCGATACGTTCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAG                                      <  SRR4302540.8654812/94‑1 (MQ=60)

                                                         TAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGA                                     <  SRR4302540.8101637/94‑1 (MQ=60)

                                                         TAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGA                                     <  SRR4302540.2825040/94‑1 (MQ=60)

                                                         TAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGA                                     <  SRR4302540.6222098/94‑1 (MQ=60)

                                                         TAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGA                                     <  SRR4302540.7492666/94‑1 (MQ=60)

                                                          AGCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAG                                    <  SRR4302540.8287274/94‑1 (MQ=60)

                                                           GCTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGC                                   <  SRR4302540.112102/94‑1 (MQ=60)

                                                           GCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGC                                   <  SRR4302540.6057034/94‑1 (MQ=60)

                                                           GCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGC                                   <  SRR4302540.7327360/94‑1 (MQ=60)

                                                           GCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGC                                   >  SRR4302540.1726859/1‑94 (MQ=60)

                                                            CTATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCG                                  >  SRR4302540.2671543/1‑94 (MQ=60)

                                                             TATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGC                                 >  SRR4302540.3235857/1‑94 (MQ=60)

                                                             TATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGC                                 >  SRR4302540.4588946/1‑94 (MQ=60)

                                                              ATACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCG                                >  SRR4302540.1193262/1‑94 (MQ=60)

                                                               TACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGG                               >  SRR4302540.3366501/1‑94 (MQ=60)

                                                               TACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGG                               <  SRR4302540.6109762/94‑1 (MQ=60)

                                                               TACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGG                               <  SRR4302540.9666076/94‑1 (MQ=60)

                                                               TACGTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGG                               >  SRR4302540.3366502/1‑94 (MQ=60)

                                                                  GTGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAA                            <  SRR4302540.1845434/94‑1 (MQ=60)

                                                                   TGCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAA                           >  SRR4302540.7486987/1‑94 (MQ=60)

                                                                    GCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAA                          >  SRR4302540.333220/1‑94 (MQ=60)

                                                                    GCTAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAA                          >  SRR4302540.42406/1‑94 (MQ=60)

                                                                      TAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGCGAGCGAAGAAAAAGAGAGCGTCAAAAAA                        >  SRR4302540.6241031/1‑94 (MQ=60)

                                                                      TAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAA                        >  SRR4302540.9128069/1‑94 (MQ=60)

                                                                      TAATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAA                        <  SRR4302540.8554650/94‑1 (MQ=60)

                                                                       AATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAA                       <  SRR4302540.8503663/94‑1 (MQ=60)

                                                                        ATTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAAT                      >  SRR4302540.8207258/1‑94 (MQ=60)

                                                                        ATTCAAGAGAAGAGACCATGGGCAACGACAAAAATGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAAT                      <  SRR4302540.9840769/94‑1 (MQ=60)

                                                                         TTCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATA                     <  SRR4302540.6193533/94‑1 (MQ=60)

                                                                          TCAAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAG                    <  SRR4302540.6487364/94‑1 (MQ=60)

                                                                            AAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAA                  >  SRR4302540.4281511/1‑94 (MQ=60)

                                                                            AAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAA                  >  SRR4302540.9929440/1‑94 (MQ=60)

                                                                            AAGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAA                  <  SRR4302540.2671353/94‑1 (MQ=60)

                                                                             AGAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAA                 <  SRR4302540.7783491/94‑1 (MQ=60)

                                                                              GAGAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAAT                <  SRR4302540.8936819/94‑1 (MQ=60)

                                                                                GAAGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAG              <  SRR4302540.4262835/94‑1 (MQ=60)

                                                                                  AGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGCAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGAT            >  SRR4302540.92809/1‑94 (MQ=60)

                                                                                  AGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGAT            <  SRR4302540.3935444/94‑1 (MQ=60)

                                                                                  AGAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGAT            <  SRR4302540.2567470/94‑1 (MQ=60)

                                                                                  AGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGAT            <  SRR4302540.10081519/94‑1 (MQ=60)

                                                                                   GAGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATG           <  SRR4302540.6926677/94‑1 (MQ=60)

                                                                                   GAGACCATGGGCAACGACAAAATTGAACAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATG           <  SRR4302540.6926678/94‑1 (MQ=60)

                                                                                    AGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGA          <  SRR4302540.1483712/94‑1 (MQ=60)

                                                                                    AGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGA          <  SRR4302540.1483713/94‑1 (MQ=60)

                                                                                    AGACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGA          >  SRR4302540.4116475/1‑94 (MQ=60)

                                                                                     GACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAA         <  SRR4302540.3655151/94‑1 (MQ=60)

                                                                                     GACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAA         <  SRR4302540.6771510/94‑1 (MQ=60)

                                                                                     GACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAA         <  SRR4302540.9923887/94‑1 (MQ=60)

                                                                                     GACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAA         <  SRR4302540.3655150/94‑1 (MQ=60)

                                                                                     GACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAA         <  SRR4302540.1566012/94‑1 (MQ=60)

                                                                                     GACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAA         >  SRR4302540.6265581/1‑94 (MQ=60)

                                                                                     GACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAA         <  SRR4302540.8660223/94‑1 (MQ=60)

                                                                                      ACCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAG        <  SRR4302540.624262/94‑1 (MQ=60)

                                                                                       CCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGA       <  SRR4302540.983261/94‑1 (MQ=60)

                                                                                       CCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGA       <  SRR4302540.5922140/94‑1 (MQ=60)

                                                                                       CCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGA       <  SRR4302540.7855477/94‑1 (MQ=60)

                                                                                       CCATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGA       <  SRR4302540.4472921/94‑1 (MQ=60)

                                                                                        CATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGAC      <  SRR4302540.9502225/94‑1 (MQ=60)

                                                                                        CATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGAC      <  SRR4302540.7058876/94‑1 (MQ=60)

                                                                                        CATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGAC      <  SRR4302540.6718416/94‑1 (MQ=60)

                                                                                         ATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACC     >  SRR4302540.6774476/1‑94 (MQ=60)

                                                                                         ATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACC     >  SRR4302540.9958103/1‑94 (MQ=60)

                                                                                         ATGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACC     <  SRR4302540.9959189/94‑1 (MQ=60)

                                                                                          TGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCG    <  SRR4302540.7512308/94‑1 (MQ=60)

                                                                                          TGGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCG    <  SRR4302540.6972278/94‑1 (MQ=60)

                                                                                           GGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGA   <  SRR4302540.8197212/94‑1 (MQ=60)

                                                                                           GGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGA   <  SRR4302540.8191917/94‑1 (MQ=60)

                                                                                           GGGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGA   >  SRR4302540.4928200/1‑94 (MQ=60)

                                                                                            GGCAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGAC  <  SRR4302540.4562677/94‑1 (MQ=60)

TTTTCTACATTTTCAGAGTAACTCCCGTCAGTTGCGAGCAAAAAAGCCGCTACGCTTTAGCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGAC  >  NC_000913/2463232‑2463417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`