Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,465,657	T→C	Y365H (TAT→CAT)	intC →	putative prophage Sf6‑like integrase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,465,657	0	T	C	100.0%	1205.0 / NA	366	Y365H (TAT→CAT)	intC	putative prophage Sf6‑like integrase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (185/181); total (185/181)

Only 100 of 374 total aligned reads displayed.

AACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAG  >  NC_000913/2465567‑2465746

  cGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtct                                                                                       <  2:7075121/93‑1 (MQ=255)

   gAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtctc                                                                                      <  2:1695945/93‑1 (MQ=255)

   gAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtctc                                                                                      >  1:5466362/1‑93 (MQ=255)

    aGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCg                                                                                     >  1:8967905/1‑93 (MQ=255)

      cACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGAt                                                                                   >  1:4091766/1‑93 (MQ=255)

        cGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaa                                                                                 <  2:10013378/93‑1 (MQ=255)

        cGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaa                                                                                 >  1:2164600/1‑93 (MQ=255)

        cGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaa                                                                                 <  1:8795707/93‑1 (MQ=255)

         gAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaaa                                                                                <  2:9847952/93‑1 (MQ=255)

         gAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaaa                                                                                >  2:6836805/1‑93 (MQ=255)

         gAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaaa                                                                                <  1:6791196/93‑1 (MQ=255)

         gAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaaa                                                                                >  1:5667720/1‑93 (MQ=255)

         gAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaaa                                                                                >  1:5579015/1‑93 (MQ=255)

          aaTGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGCGGGATTTACAACCATGCTCAGCATCTCGATAAAc                                                                               >  1:2498617/1‑93 (MQ=255)

             ggCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCa                                                                            <  2:3554713/93‑1 (MQ=255)

             ggCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCa                                                                            <  2:8406479/93‑1 (MQ=255)

             ggCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCa                                                                            >  1:7213950/1‑93 (MQ=255)

             ggCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCa                                                                            <  2:2485881/93‑1 (MQ=255)

               ccTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCaga                                                                          <  1:9190156/93‑1 (MQ=255)

                ctgctgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCagag                                                                         <  2:3314778/93‑1 (MQ=255)

                 tgctgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAgaga                                                                        >  1:1280925/1‑93 (MQ=255)

                  gctgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGaa                                                                       <  2:4726289/93‑1 (MQ=255)

                   ctgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGaaa                                                                      <  1:1683823/93‑1 (MQ=255)

                    tgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAat                                                                     <  1:8166096/93‑1 (MQ=255)

                     gACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatg                                                                    >  2:2307821/1‑93 (MQ=255)

                      aCGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATACACGCAGAGAAatga                                                                   >  2:3057504/1‑93 (MQ=255)

                      aCGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatga                                                                   <  2:2736547/93‑1 (MQ=255)

                      aCGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatga                                                                   >  2:481057/1‑93 (MQ=255)

                       cGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatgat                                                                  <  1:4587062/93‑1 (MQ=255)

                        gCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatgatg                                                                 >  2:5342763/1‑93 (MQ=255)

                        gCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatgatg                                                                 <  1:6976589/93‑1 (MQ=255)

                          tATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCa                                                               <  2:5927256/93‑1 (MQ=255)

                           aTTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCaa                                                              >  2:9076792/1‑93 (MQ=255)

                           aTTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCaa                                                              <  1:307436/93‑1 (MQ=255)

                            ttGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAt                                                             >  2:3729711/1‑93 (MQ=255)

                             tGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAtg                                                            <  2:3865075/93‑1 (MQ=255)

                             tGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAtg                                                            <  2:1524635/93‑1 (MQ=255)

                                  tGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTggg                                                       >  1:5801827/1‑93 (MQ=255)

                                  tGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTggg                                                       >  1:4023404/1‑93 (MQ=255)

                                   gCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGc                                                      <  2:5431842/93‑1 (MQ=255)

                                   gCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGc                                                      <  1:1460677/93‑1 (MQ=255)

                                     aaCTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGGGGGAgg                                                    >  2:6888083/1‑93 (MQ=255)

                                      aCTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGa                                                   <  2:96246/93‑1 (MQ=255)

                                       cTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGAc                                                  <  2:578987/93‑1 (MQ=255)

                                         ggCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTg                                                <  2:6093998/93‑1 (MQ=255)

                                         ggCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGGGGGGCGACTg                                                >  1:6278490/1‑93 (MQ=255)

                                            acaTGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCt                                             >  2:6201372/1‑93 (MQ=255)

                                              aTGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtg                                           >  1:3459938/1‑93 (MQ=255)

                                               tGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGGCTGGCTtga                                          >  1:17629/1‑93 (MQ=255)

                                               tGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCtttg                                          >  2:7520329/1‑91 (MQ=255)

                                               tGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCttta                                          >  1:3886515/1‑91 (MQ=255)

                                               tGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtga                                          >  1:6372538/1‑93 (MQ=255)

                                                gCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtgat                                         <  1:18869/93‑1 (MQ=255)

                                                  aaaCGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTttatta                                       >  2:1124470/1‑91 (MQ=255)

                                                      ggcggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCACTGGTGGGCGGCCTGGCTTGATGACAAg                                   >  2:4305418/1‑93 (MQ=255)

                                                       gcggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAgg                                  >  2:9496694/1‑93 (MQ=255)

                                                       gcggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAgg                                  <  2:45631/93‑1 (MQ=255)

                                                       gcggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAgg                                  >  1:6064497/1‑93 (MQ=255)

                                                        cgtaTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGt                                 <  1:3961316/90‑1 (MQ=255)

                                                        cggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGt                                 <  1:3239337/93‑1 (MQ=255)

                                                        cggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGt                                 <  2:417922/93‑1 (MQ=255)

                                                         ggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAgggg                                >  1:3612322/1‑91 (MQ=255)

                                                          gATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTgg                               <  2:1316512/93‑1 (MQ=255)

                                                          gATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTgg                               <  1:5131413/93‑1 (MQ=255)

                                                          gATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTgg                               <  1:2901586/93‑1 (MQ=255)

                                                           aTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGGTGAGAAGggggg                              >  1:3742025/1‑92 (MQ=255)

                                                           aTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGGGGAGggggg                              >  2:6946759/1‑92 (MQ=255)

                                                           aTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGggggg                              >  1:7999013/1‑92 (MQ=255)

                                                            tCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGgggggg                             >  2:3498838/1‑91 (MQ=255)

                                                            tCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAg                             <  2:1496756/93‑1 (MQ=255)

                                                            tCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAg                             <  1:2286716/93‑1 (MQ=255)

                                                            tCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAg                             <  1:7538501/93‑1 (MQ=255)

                                                             cTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGt                            <  1:5295606/93‑1 (MQ=255)

                                                             cTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTCGAGt                            <  2:6488246/93‑1 (MQ=255)

                                                              tgtgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTg                           <  1:2811905/93‑1 (MQ=255)

                                                               gtgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGa                          <  1:8379548/93‑1 (MQ=255)

                                                               gtgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGa                          <  2:934932/93‑1 (MQ=255)

                                                                tgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAg                         <  2:776603/93‑1 (MQ=255)

                                                                  cGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCg                       <  2:2874915/93‑1 (MQ=255)

                                                                    tGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGGTGAGAAGGGGGAGTGAGCGAc                     >  2:8130350/1‑93 (MQ=255)

                                                                    tGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGAc                     <  1:8419314/93‑1 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCt                   <  2:9168651/93‑1 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCt                   <  2:5060578/93‑1 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCt                   <  2:5833910/93‑1 (MQ=255)

                                                                       gATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGTGAGCGACCtt                  >  1:7434005/1‑93 (MQ=255)

                                                                         tttACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCttta                >  2:6710797/1‑91 (MQ=255)

                                                                         tttACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaa                <  1:4746627/93‑1 (MQ=255)

                                                                          ttACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaac               <  1:4665040/93‑1 (MQ=255)

                                                                            aCAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaacaa             >  2:3987646/1‑93 (MQ=255)

                                                                            aCAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaacaa             <  1:6708158/93‑1 (MQ=255)

                                                                            aCAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGGGTGGGCGACCTTaacaa             >  1:7736449/1‑93 (MQ=255)

                                                                               aCCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGTGAGGGACCTTAAAAACtt          >  2:8646016/1‑92 (MQ=255)

                                                                                 cATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGGGCGGACTTAACAACAATc        >  2:7256193/1‑93 (MQ=255)

                                                                                 cATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATc        >  1:4379660/1‑93 (MQ=255)

                                                                                 cATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCCTAACCACTATc        >  2:6603854/1‑93 (MQ=255)

                                                                                  aTGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGGGTGAGCGACCTTAAAAACAATCg       >  1:9520683/1‑93 (MQ=255)

                                                                                   tGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGa      <  1:9740707/93‑1 (MQ=255)

                                                                                    gCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGaa     <  2:2093454/93‑1 (MQ=255)

                                                                                    gCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGGGAGGGACCTTAACAACTATCGaa     >  1:1030472/1‑93 (MQ=255)

                                                                                      tCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATa   <  1:3349400/93‑1 (MQ=255)

AACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAG  >  NC_000913/2465567‑2465746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 204 total aligned reads displayed.

ATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAGCACA  >  NC_000913/2465564‑2465750

ATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGC                                                                                               >  SRR4302540.3897811/1‑94 (MQ=60)

ATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGC                                                                                               >  SRR4302540.3569016/1‑94 (MQ=60)

ATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGC                                                                                               <  SRR4302540.5775609/94‑1 (MQ=60)

  GAACGAGCACGAATGGTCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGTATCTGTGCGTGGGATTTACAACCATGCTCAGCAT                                                                                             <  SRR4302540.3218843/94‑1 (MQ=60)

  GAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAT                                                                                             <  SRR4302540.901681/94‑1 (MQ=60)

    ACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCT                                                                                           <  SRR4302540.8481090/94‑1 (MQ=60)

     CGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTC                                                                                          >  SRR4302540.5526534/1‑94 (MQ=60)

     CGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTC                                                                                          >  SRR4302540.7109901/1‑94 (MQ=60)

      GAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCG                                                                                         >  SRR4302540.5419453/1‑94 (MQ=60)

      GAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCG                                                                                         >  SRR4302540.4699471/1‑94 (MQ=60)

      GAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCG                                                                                         >  SRR4302540.9074257/1‑94 (MQ=60)

        GCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGAT                                                                                       >  SRR4302540.5976995/1‑94 (MQ=60)

        GCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGAT                                                                                       >  SRR4302540.8483464/1‑94 (MQ=60)

        GCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGAT                                                                                       >  SRR4302540.4135909/1‑94 (MQ=60)

         CACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATA                                                                                      >  SRR4302540.8442061/1‑94 (MQ=60)

          ACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAA                                                                                     >  SRR4302540.2187915/1‑94 (MQ=60)

          ACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAA                                                                                     <  SRR4302540.3726525/94‑1 (MQ=60)

           CGAATGGCCTGCTGACGTTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAA                                                                                    <  SRR4302540.4197214/94‑1 (MQ=60)

           CGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAA                                                                                    >  SRR4302540.5640424/1‑94 (MQ=60)

           CGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAA                                                                                    <  SRR4302540.8897422/94‑1 (MQ=60)

           CGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAA                                                                                    >  SRR4302540.5730129/1‑94 (MQ=60)

           CGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAA                                                                                    <  SRR4302540.6784820/94‑1 (MQ=60)

            GAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAC                                                                                   >  SRR4302540.8892923/1‑94 (MQ=60)

            GAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAC                                                                                   >  SRR4302540.780187/1‑94 (MQ=60)

            GAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAC                                                                                   >  SRR4302540.8097462/1‑94 (MQ=60)

            GAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAC                                                                                   >  SRR4302540.9894458/1‑94 (MQ=60)

            GAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAC                                                                                   <  SRR4302540.6273184/94‑1 (MQ=60)

            GAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAC                                                                                   <  SRR4302540.7489090/94‑1 (MQ=60)

            GAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAC                                                                                   <  SRR4302540.6866303/94‑1 (MQ=60)

            GAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGCGGGATTTACAACCATGCTCAGCATCTCGATAAAC                                                                                   >  SRR4302540.2525560/1‑94 (MQ=60)

             AATGGCCTGCTTGCGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACG                                                                                  <  SRR4302540.2095150/94‑1 (MQ=60)

             AATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGCATTTACAACCATGCTCAGCATCTCGATAAACG                                                                                  >  SRR4302540.4022650/1‑94 (MQ=60)

             AATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGCGATTTACAACCATGCTCAGCATCTCGATAAACG                                                                                  >  SRR4302540.4022653/1‑94 (MQ=60)

              ATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGC                                                                                 >  SRR4302540.645575/1‑94 (MQ=60)

               TGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCA                                                                                <  SRR4302540.3035049/94‑1 (MQ=60)

               TGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCA                                                                                >  SRR4302540.7294365/1‑94 (MQ=60)

                  CCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAG                                                                             <  SRR4302540.9300373/94‑1 (MQ=60)

                  CCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAG                                                                             <  SRR4302540.860623/94‑1 (MQ=60)

                  CCTGCTGACGCTATTGAAGTGCAACAGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAAGCAGCG                                                                             >  SRR4302540.4189655/1‑94 (MQ=60)

                   CTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGA                                                                            >  SRR4302540.1294133/1‑94 (MQ=60)

                      CTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAAT                                                                         <  SRR4302540.1702095/94‑1 (MQ=60)

                      CTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAAT                                                                         >  SRR4302540.2938773/1‑94 (MQ=60)

                      CTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAAT                                                                         <  SRR4302540.7571382/94‑1 (MQ=60)

                      CTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAAT                                                                         <  SRR4302540.3147131/94‑1 (MQ=60)

                       TGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATG                                                                        <  SRR4302540.2680408/94‑1 (MQ=60)

                       TGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATG                                                                        <  SRR4302540.8260924/94‑1 (MQ=60)

                       TGACGCTAATGAAATGCAAAAGACAAATGCAAACGGCGGATCTGTGCGTGAGATTTAAAACCATGCTAAGCATCTCGATAAACGCAGAGAAATG                                                                        <  SRR4302540.7778951/94‑1 (MQ=50)

                        GACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGA                                                                       >  SRR4302540.5819318/1‑94 (MQ=60)

                        GACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGA                                                                       <  SRR4302540.3960969/94‑1 (MQ=60)

                         ACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGAT                                                                      <  SRR4302540.2467793/94‑1 (MQ=60)

                         ACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGAT                                                                      <  SRR4302540.3947670/94‑1 (MQ=60)

                          CGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATG                                                                     <  SRR4302540.4636464/94‑1 (MQ=60)

                          CGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATG                                                                     <  SRR4302540.4636467/94‑1 (MQ=60)

                          CGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATG                                                                     >  SRR4302540.4852865/1‑94 (MQ=60)

                          CGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATG                                                                     >  SRR4302540.1719656/1‑94 (MQ=60)

                          CGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATG                                                                     >  SRR4302540.1422428/1‑94 (MQ=60)

                           GCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGC                                                                    <  SRR4302540.8480227/94‑1 (MQ=60)

                           GCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGC                                                                    <  SRR4302540.7054106/94‑1 (MQ=60)

                           GCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGC                                                                    <  SRR4302540.7054107/94‑1 (MQ=60)

                            CTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCA                                                                   <  SRR4302540.2882581/94‑1 (MQ=60)

                             TATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAA                                                                  <  SRR4302540.3869082/94‑1 (MQ=60)

                              ATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTTCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAT                                                                 <  SRR4302540.9520562/94‑1 (MQ=60)

                              ATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAT                                                                 >  SRR4302540.2971892/1‑94 (MQ=60)

                              ATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAT                                                                 <  SRR4302540.310491/94‑1 (MQ=60)

                               TTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATG                                                                <  SRR4302540.1185579/94‑1 (MQ=60)

                               TTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATG                                                                <  SRR4302540.793499/94‑1 (MQ=60)

                               TTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATG                                                                <  SRR4302540.1201460/94‑1 (MQ=60)

                               TTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGACAAACGCAGAGAAATGATGCAATG                                                                >  SRR4302540.9862980/1‑94 (MQ=60)

                               TTGAAGTGCAACTAGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCGCAGCATCTCGATAAACGCAGAGAAATGATGCAATG                                                                <  SRR4302540.8600336/94‑1 (MQ=60)

                                TGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGG                                                               >  SRR4302540.3789791/1‑94 (MQ=60)

                                TGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGG                                                               >  SRR4302540.4517149/1‑94 (MQ=60)

                                TGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGG                                                               <  SRR4302540.5666659/94‑1 (MQ=60)

                                TGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGG                                                               >  SRR4302540.1970161/1‑94 (MQ=60)

                                 TAAGTGCAACTTGCACATGCAACCGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGT                                                              <  SRR4302540.954194/94‑1 (MQ=60)

                                  AAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTG                                                             <  SRR4302540.5738767/94‑1 (MQ=60)

                                   AGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGG                                                            <  SRR4302540.7991948/94‑1 (MQ=60)

                                    GTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGG                                                           >  SRR4302540.4066769/1‑94 (MQ=60)

                                    GTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGG                                                           >  SRR4302540.323436/1‑94 (MQ=60)

                                    GTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGG                                                           >  SRR4302540.5865933/1‑94 (MQ=60)

                                     TGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGC                                                          <  SRR4302540.5679122/94‑1 (MQ=60)

                                      GCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCG                                                         <  SRR4302540.1476588/94‑1 (MQ=60)

                                       CAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGGGG                                                        >  SRR4302540.3286998/1‑94 (MQ=60)

                                       CAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGG                                                        >  SRR4302540.6938954/1‑94 (MQ=60)

                                       CAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGG                                                        <  SRR4302540.3942925/94‑1 (MQ=60)

                                        AACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGA                                                       <  SRR4302540.738172/94‑1 (MQ=60)

                                        AACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGA                                                       >  SRR4302540.220094/1‑94 (MQ=60)

                                          CTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACT                                                     >  SRR4302540.9479368/1‑94 (MQ=60)

                                          CTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACT                                                     <  SRR4302540.1847694/94‑1 (MQ=60)

                                          CTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACT                                                     >  SRR4302540.2375737/1‑94 (MQ=60)

                                           TGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGACATGATGCAATGGTGGGCGGACTG                                                    <  SRR4302540.1837523/94‑1 (MQ=60)

                                           TGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTG                                                    >  SRR4302540.6348347/1‑94 (MQ=60)

                                           TGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGGGGGGCGACTG                                                    >  SRR4302540.6348348/1‑94 (MQ=60)

                                             GCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGC                                                  <  SRR4302540.5381982/94‑1 (MQ=60)

                                             GCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGC                                                  <  SRR4302540.5188525/94‑1 (MQ=60)

                                               ACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTT                                                >  SRR4302540.7633801/1‑94 (MQ=60)

                                               ACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTT                                                >  SRR4302540.5685494/1‑94 (MQ=60)

                                                CATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTG                                               >  SRR4302540.3497596/1‑94 (MQ=60)

                                                 ATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGcgggggggcgggcgtgg                                              >  SRR4302540.17825/1‑77 (MQ=60)

                                                 ATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGGCTGGCTTGA                                              >  SRR4302540.17824/1‑94 (MQ=60)

                                                 ATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTTA                                              >  SRR4302540.3928730/1‑94 (MQ=60)

                                                 ATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGT                                              >  SRR4302540.6443489/1‑94 (MQ=60)

                                                 ATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGA                                              >  SRR4302540.6723758/1‑94 (MQ=60)

                                                 ATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGA                                              >  SRR4302540.6443490/1‑94 (MQ=60)

                                                   GCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATG                                            <  SRR4302540.19071/94‑1 (MQ=60)

                                                   GCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATG                                            <  SRR4302540.6909524/94‑1 (MQ=60)

                                                   GCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATG                                            <  SRR4302540.2846718/94‑1 (MQ=60)

                                                     AAACGGCGGCTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGgttgacttg                                          >  SRR4302540.4689408/1‑85 (MQ=60)

                                                     AAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAG                                          >  SRR4302540.6351762/1‑94 (MQ=60)

                                                     AAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAG                                          <  SRR4302540.9270017/94‑1 (MQ=60)

                                                        CGGCGGATCTTTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAG                                       <  SRR4302540.1436941/94‑1 (MQ=60)

                                                        CGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAG                                       <  SRR4302540.1436942/94‑1 (MQ=60)

                                                         GGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGGTGAGAAGG                                      >  SRR4302540.9666200/1‑94 (MQ=60)

                                                         GGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGG                                      >  SRR4302540.6131914/1‑94 (MQ=60)

                                                           CGTATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTG                                    <  SRR4302540.4004039/94‑1 (MQ=60)

                                                           CGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTG                                    <  SRR4302540.5333478/94‑1 (MQ=60)

                                                           CGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTG                                    <  SRR4302540.3274582/94‑1 (MQ=60)

                                                           CGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGG                                    >  SRR4302540.3651817/1‑94 (MQ=60)

                                                            GGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGGTGAGAAagggg                                   >  SRR4302540.1154520/1‑89 (MQ=60)

                                                            GGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAagggg                                   >  SRR4302540.9133693/1‑89 (MQ=60)

                                                            GGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGG                                   >  SRR4302540.6287652/1‑94 (MQ=60)

                                                             GATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGGTGAGAAGGgggg                                  >  SRR4302540.3782854/1‑90 (MQ=60)

                                                             GATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGgggg                                  >  SRR4302540.8092124/1‑90 (MQ=60)

                                                             GATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGA                                  <  SRR4302540.2933252/94‑1 (MQ=60)

                                                             GATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGA                                  <  SRR4302540.4494997/94‑1 (MQ=60)

                                                             GATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGA                                  <  SRR4302540.5186988/94‑1 (MQ=60)

                                                             GATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGAGGA                                  >  SRR4302540.7193004/1‑94 (MQ=60)

                                                               TCTGTGCGTGGGATTTACCACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGT                                >  SRR4302540.63797/1‑94 (MQ=60)

                                                               TCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGT                                <  SRR4302540.7622943/94‑1 (MQ=60)

                                                               TCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGT                                <  SRR4302540.2311303/94‑1 (MQ=60)

                                                               TCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGT                                <  SRR4302540.3620117/94‑1 (MQ=60)

                                                               TCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGT                                <  SRR4302540.2311304/94‑1 (MQ=60)

                                                                CTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTG                               >  SRR4302540.8024395/1‑94 (MQ=60)

                                                                CTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTG                               <  SRR4302540.5353527/94‑1 (MQ=60)

                                                                CTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTG                               <  SRR4302540.9022079/94‑1 (MQ=60)

                                                                CTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGAGAGCGGACCGGCTTGTTGAGAAaggggaatg                               >  SRR4302540.4340955/1‑85 (MQ=60)

                                                                 TGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGggggggcg                              >  SRR4302540.7962855/1‑86 (MQ=60)

                                                                 TGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGA                              <  SRR4302540.2842268/94‑1 (MQ=60)

                                                                  GTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGggggggggg                             >  SRR4302540.8089831/1‑85 (MQ=60)

                                                                  GTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAG                             <  SRR4302540.8476782/94‑1 (MQ=60)

                                                                  GTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAAGGGGAGTGAG                             >  SRR4302540.291447/1‑94 (MQ=60)

                                                                   TGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGgggggggggg                            >  SRR4302540.1640881/1‑84 (MQ=60)

                                                                    gagaGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCG                           <  SRR4302540.1484268/90‑1 (MQ=60)

                                                                    GCGTGGGATTTACAAGCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCG                           <  SRR4302540.1484267/94‑1 (MQ=60)

                                                                    GCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCG                           >  SRR4302540.7570907/1‑94 (MQ=60)

                                                                    GCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGTGAGCG                           >  SRR4302540.3437894/1‑94 (MQ=60)

                                                                     CGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAAGGGGGGTGAGCGA                          >  SRR4302540.680790/1‑94 (MQ=60)

                                                                      GTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGGTGAGAAGGgggaggggcggac                         >  SRR4302540.4220101/1‑81 (MQ=60)

                                                                      GTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGgtgagggagggga                         >  SRR4302540.4759597/1‑81 (MQ=60)

                                                                       TGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGGGGGAGGGACC                        >  SRR4302540.913156/1‑94 (MQ=60)

                                                                       TGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACC                        <  SRR4302540.8517044/94‑1 (MQ=60)

                                                                        GGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCT                       <  SRR4302540.3408003/94‑1 (MQ=60)

                                                                        GGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCT                       <  SRR4302540.3648646/94‑1 (MQ=60)

                                                                         GGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGGGTGAGCGACCTT                      >  SRR4302540.7115059/1‑94 (MQ=60)

                                                                         GGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGTGAGCGACCTT                      >  SRR4302540.7516829/1‑94 (MQ=60)

                                                                         GGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCGTGATGAGAAAGGGGAGGGAGGGACCTT                      >  SRR4302540.3866774/1‑94 (MQ=60)

                                                                            TTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAAC                   <  SRR4302540.4797276/94‑1 (MQ=60)

                                                                             TTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACA                  <  SRR4302540.4131576/94‑1 (MQ=60)

                                                                             TTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACA                  <  SRR4302540.4868340/94‑1 (MQ=60)

                                                                             TTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACA                  <  SRR4302540.4131577/94‑1 (MQ=60)

                                                                             TTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACA                  <  SRR4302540.4714980/94‑1 (MQ=60)

                                                                             TTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGGGAGGGACCTTAACA                  >  SRR4302540.2310734/1‑94 (MQ=60)

                                                                              TACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGGGTGGGCGACCTTAACAA                 >  SRR4302540.7826769/1‑94 (MQ=60)

                                                                               ACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAAC                <  SRR4302540.6782189/94‑1 (MQ=60)

                                                                                CAACCATGCTCAGCATCTGGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTGGATGAGAAGGTGGAGTGAGCGACCTTAACAACT               <  SRR4302540.2528159/94‑1 (MQ=60)

                                                                                CAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGTGAGCGACCTTAACAACT               >  SRR4302540.8226129/1‑94 (MQ=60)

                                                                                 AACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGAgtggtttattgaggatggggggtgggcgaccttaaaaacga              >  SRR4302540.3668074/1‑53 (MQ=60)

                                                                                 AACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGGGAGCGACCTTAACAACTA              >  SRR4302540.6031146/1‑94 (MQ=60)

                                                                                  ACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTCGATGAGAAGGTGGAGTGAGCGACCTTAACAACTAT             <  SRR4302540.2569256/94‑1 (MQ=60)

                                                                                   CCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGCGAAAGTGGAGTGAGCGACCTTAAaaaacatc            >  SRR4302540.4427214/1‑86 (MQ=60)

                                                                                   CCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATC            <  SRR4302540.9018008/94‑1 (MQ=60)

                                                                                   CCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATC            <  SRR4302540.1643850/94‑1 (MQ=60)

                                                                                   CCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATC            >  SRR4302540.4427210/1‑94 (MQ=60)

                                                                                   CCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATC            <  SRR4302540.903691/94‑1 (MQ=60)

                                                                                    CATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCG           >  SRR4302540.5638839/1‑94 (MQ=60)

                                                                                    CATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCG           <  SRR4302540.9633800/94‑1 (MQ=60)

                                                                                    CATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCG           >  SRR4302540.6482305/1‑94 (MQ=60)

                                                                                    CATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGGGTGAGCGACCTTAAAAACAATCG           >  SRR4302540.9633429/1‑94 (MQ=60)

                                                                                    CATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGTGAGCGACCTTAACAACTATCG           >  SRR4302540.3345992/1‑94 (MQ=60)

                                                                                    CATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGGGAGCGACCTTAACAACTATTG           >  SRR4302540.2159662/1‑94 (MQ=60)

                                                                                     ATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGA          <  SRR4302540.8375267/94‑1 (MQ=60)

                                                                                     ATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGGGAGCGACCTTAACAACTATCGA          >  SRR4302540.3541877/1‑94 (MQ=60)

                                                                                      TGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGGAGGTGGAGTTAGCGACCTTAACAACTATCGAA         >  SRR4302540.4761708/1‑94 (MQ=60)

                                                                                      TGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAA         <  SRR4302540.9855051/94‑1 (MQ=60)

                                                                                      TGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGGGAGGGACCTTAACAACTATCGAA         >  SRR4302540.1040934/1‑94 (MQ=60)

                                                                                       GCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAAT        <  SRR4302540.3473782/94‑1 (MQ=60)

                                                                                        CTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGGGACCTTTACAACTATCGAATA       >  SRR4302540.4588034/1‑94 (MQ=60)

                                                                                        CTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGTGAGCGACCTTAACAACTATCGAATA       >  SRR4302540.5529236/1‑94 (MQ=60)

                                                                                         TCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAG      <  SRR4302540.3386123/94‑1 (MQ=60)

                                                                                         TCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAG      >  SRR4302540.8243968/1‑94 (MQ=60)

                                                                                         TCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAG      <  SRR4302540.965476/94‑1 (MQ=60)

                                                                                         TCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAG      >  SRR4302540.5589352/1‑94 (MQ=60)

                                                                                         TCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCAACCTTAACAACTATCGAATAC      >  SRR4302540.5213739/1‑94 (MQ=60)

                                                                                         TCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGGGAGGGACCTTAACAACTATCGAATAA      >  SRR4302540.4059163/1‑94 (MQ=60)

                                                                                         TCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGGGAGCGACCTTAACAACTATCGAATAG      >  SRR4302540.1751006/1‑94 (MQ=60)

                                                                                          CAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGGGTGAGGGACCTTAAAAACTATCGAATAGC     >  SRR4302540.4360589/1‑94 (MQ=60)

                                                                                          CAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAGC     <  SRR4302540.5860797/94‑1 (MQ=60)

                                                                                            GCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTTATTAGAAGGTGGAGTGAGAGACCTTAACAACTATCGTATAGCAC   >  SRR4302540.4955819/1‑94 (MQ=60)

                                                                                            GCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAGCAC   <  SRR4302540.2836584/94‑1 (MQ=60)

                                                                                             CATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAGCACA  <  SRR4302540.7511720/94‑1 (MQ=60)

                                                                                             CATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAGCACA  >  SRR4302540.6735312/1‑94 (MQ=60)

ATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAGCACA  >  NC_000913/2465564‑2465750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`