Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,486,485 T→C Y248C (TAC→TGC)  yfdE ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,486,4850TC91.3% 968.8 / 62.8 357Y248C (TAC→TGC) yfdEhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (9/22);  new base C (151/175);  total (160/197)
Fisher's exact test for biased strand distribution p-value = 8.79e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01

Only 100 of 362 total aligned reads displayed.

GCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAA  >  NC_000913/2486395‑2486576
                                                                                          |                                                                                           
  cTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAggg                                                                                         <  1:5848962/93‑1 (MQ=255)
  cTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAggg                                                                                         <  2:1712150/93‑1 (MQ=255)
   tGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGa                                                                                        >  1:9273153/1‑93 (MQ=255)
   tGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGa                                                                                        <  1:2897880/93‑1 (MQ=255)
    ggCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGCGCCATGCAGGGAt                                                                                       >  1:5781684/1‑93 (MQ=255)
     gCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATg                                                                                      <  1:2014814/93‑1 (MQ=255)
     gCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATg                                                                                      <  2:5970226/93‑1 (MQ=255)
      cATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATgg                                                                                     <  2:2004748/93‑1 (MQ=255)
       aTAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGc                                                                                    >  1:5682916/1‑93 (MQ=255)
        tAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCg                                                                                   >  1:1232505/1‑93 (MQ=255)
        tAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCg                                                                                   >  1:2082571/1‑93 (MQ=255)
         aaCGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGa                                                                                  >  1:3717684/1‑93 (MQ=255)
          aCGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGAt                                                                                 <  2:4319302/93‑1 (MQ=255)
            gCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGAttt                                                                               <  1:6680794/93‑1 (MQ=255)
              aGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTcc                                                                             <  1:6015381/93‑1 (MQ=255)
              aGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTcc                                                                             >  1:175022/1‑93 (MQ=255)
               gAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTccc                                                                            >  2:2213123/1‑93 (MQ=255)
               gAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTccc                                                                            <  2:5192343/93‑1 (MQ=255)
                  aaaaGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGa                                                                         <  2:2456338/93‑1 (MQ=255)
                   aaaGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGAc                                                                        >  1:7137116/1‑93 (MQ=255)
                     aGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGt                                                                      <  2:9583659/93‑1 (MQ=255)
                        ttGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTtgg                                                                   >  2:8658455/1‑92 (MQ=255)
                         tGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTtgtg                                                                  <  1:5983574/93‑1 (MQ=255)
                         tGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTtgtg                                                                  >  2:8289582/1‑93 (MQ=255)
                         tGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTtgtg                                                                  >  1:2350229/1‑93 (MQ=255)
                          ttCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTgtgg                                                                 <  1:8551053/92‑1 (MQ=255)
                          gTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGCTGGCGATTTCCCAGACGTTgtgg                                                                 >  2:5085071/1‑93 (MQ=255)
                          gTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTgtgg                                                                 >  1:8714533/1‑93 (MQ=255)
                           tCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTgtggt                                                                <  1:4356112/93‑1 (MQ=255)
                           tCATGACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTACCCAGACGTTgtggt                                                                <  2:386107/93‑1 (MQ=255)
                             aTTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGa                                                              <  2:7382743/93‑1 (MQ=255)
                              ttACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAc                                                             >  2:6741010/1‑93 (MQ=255)
                              ttACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAc                                                             >  2:500538/1‑93 (MQ=255)
                              ttACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAc                                                             >  1:6866453/1‑93 (MQ=255)
                               tACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACt                                                            >  2:5744239/1‑93 (MQ=255)
                               tACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACt                                                            <  2:8847906/93‑1 (MQ=255)
                                aCCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACtt                                                           >  2:6210437/1‑93 (MQ=255)
                                   acaacaAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTccc                                                        >  2:3758437/1‑93 (MQ=255)
                                    caacaaATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCa                                                       <  1:3919068/93‑1 (MQ=255)
                                     aacaaATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAg                                                      >  1:5492323/1‑93 (MQ=255)
                                      acaaATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGt                                                     <  1:3579579/93‑1 (MQ=255)
                                      acaaATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGt                                                     <  2:6653084/93‑1 (MQ=255)
                                        aaaTCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTg                                                   >  2:7115159/1‑93 (MQ=255)
                                          aTCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCg                                                 >  1:8054459/1‑93 (MQ=255)
                                           tCGTAATCGGCTTATCCTGAGGATTGAAAACATCAAAAGGTGCAATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTgaga                                                >  1:7599055/1‑93 (MQ=255)
                                            cGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGat                                               <  1:4204668/93‑1 (MQ=255)
                                            cGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGat                                               <  2:6866560/93‑1 (MQ=255)
                                             gTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGata                                              >  1:676495/1‑93 (MQ=255)
                                             gTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGata                                              >  1:1087297/1‑93 (MQ=255)
                                              tAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatat                                             <  1:5300444/93‑1 (MQ=255)
                                               aaTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatata                                            <  2:8084664/93‑1 (MQ=255)
                                               aaTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatata                                            <  1:9171980/93‑1 (MQ=255)
                                               aaTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatata                                            <  1:6395157/93‑1 (MQ=255)
                                               aaTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatata                                            <  1:7040088/93‑1 (MQ=255)
                                                aTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatatat                                           >  2:1151150/1‑93 (MQ=255)
                                                 tCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATg                                          <  2:36457/93‑1 (MQ=255)
                                                 tCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATg                                          >  1:8391274/1‑93 (MQ=255)
                                                  cGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGc                                         <  2:9752420/93‑1 (MQ=255)
                                                   ggCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGcc                                        >  2:798116/1‑93 (MQ=255)
                                                   ggCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGcc                                        <  1:60896/93‑1 (MQ=255)
                                                    gCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCa                                       <  1:993140/93‑1 (MQ=255)
                                                    gCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCa                                       >  1:7437545/1‑93 (MQ=255)
                                                     cTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCAt                                      <  1:4690690/93‑1 (MQ=255)
                                                     cTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCAt                                      <  1:626565/93‑1 (MQ=255)
                                                      ttATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATc                                     <  1:5127683/93‑1 (MQ=255)
                                                      ttATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGAGGTGACTTCCCAGTTGCGATATATGCCATc                                     <  2:5440741/93‑1 (MQ=255)
                                                         tCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGa                                  <  2:7833895/93‑1 (MQ=255)
                                                         tCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGa                                  <  1:7884952/93‑1 (MQ=255)
                                                         tCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGa                                  <  1:6167783/93‑1 (MQ=255)
                                                          ccTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCTTCCGAc                                 >  1:1369748/1‑93 (MQ=255)
                                                          ccTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGAc                                 <  1:9070791/93‑1 (MQ=255)
                                                           cTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGTCATCAGAcc                                <  1:6512612/93‑1 (MQ=255)
                                                            tGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCa                               <  1:9459962/93‑1 (MQ=255)
                                                             gAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAt                              <  1:2538666/93‑1 (MQ=255)
                                                             gAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAt                              <  1:1404561/93‑1 (MQ=255)
                                                             gAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAt                              >  2:1652005/1‑93 (MQ=255)
                                                             gAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAt                              >  1:3120299/1‑93 (MQ=255)
                                                             gAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAt                              <  1:4049308/93‑1 (MQ=255)
                                                              aGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATg                             <  1:1799466/93‑1 (MQ=255)
                                                               gTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGc                            <  1:1556887/93‑1 (MQ=255)
                                                                tATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCt                           >  2:4695599/1‑93 (MQ=255)
                                                                tATTGAAAACATCAAAAGGCGCCATGCAGGGATGGCGCTTTCCCAGACGCTGAGTTGACTTCCCAGTTGCGATATATTCCATCACACCATGCt                           >  2:2870458/1‑93 (MQ=255)
                                                                 aTTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTc                          >  2:7656532/1‑93 (MQ=255)
                                                                  ttGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTcc                         <  1:5175442/93‑1 (MQ=255)
                                                                  ttGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTcc                         <  2:1231399/93‑1 (MQ=255)
                                                                   tGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCa                        >  2:2635758/1‑93 (MQ=255)
                                                                   tGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCa                        <  1:490596/93‑1 (MQ=255)
                                                                   tGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCa                        >  1:8255597/1‑93 (MQ=255)
                                                                     aaaaCATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGa                      >  1:9591443/1‑93 (MQ=255)
                                                                        aCATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGaaaa                   <  2:10034699/93‑1 (MQ=255)
                                                                        aCATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGaaaa                   <  2:1342651/93‑1 (MQ=255)
                                                                           tCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTc                >  2:9313309/1‑93 (MQ=255)
                                                                            cAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTTACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCa               <  1:9760745/93‑1 (MQ=255)
                                                                             aaaaGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCATTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAg              >  1:6448904/1‑93 (MQ=255)
                                                                                   tGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGc        <  2:6132318/93‑1 (MQ=255)
                                                                                   ggCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGc        <  2:1795693/92‑1 (MQ=255)
                                                                                      cATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATc     <  2:9400428/93‑1 (MQ=255)
                                                                                       aTGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCa    <  2:4138514/93‑1 (MQ=255)
                                                                                         gTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCaaa  <  2:3968335/93‑1 (MQ=255)
                                                                                         atAGGGATCAAGATTGCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCaaa  <  2:8215984/92‑1 (MQ=255)
                                                                                          |                                                                                           
GCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAA  >  NC_000913/2486395‑2486576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 224 total aligned reads displayed.
AGTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAACA  >  NC_000913/2486392‑2486578
                                                                                             |                                                                                             
AGTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGC                                                                                               >  SRR4302540.6200621/1‑94 (MQ=60)
AGTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGC                                                                                               <  SRR4302540.8618262/94‑1 (MQ=60)
AGTGCCTGGCATAACGCAGAAAAAAGCTTGACATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGC                                                                                               <  SRR4302540.4958570/94‑1 (MQ=60)
 GTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCA                                                                                              <  SRR4302540.8185994/94‑1 (MQ=60)
 GTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCA                                                                                              <  SRR4302540.3174138/94‑1 (MQ=60)
 GTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCA                                                                                              >  SRR4302540.3046157/1‑94 (MQ=60)
 GTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCA                                                                                              >  SRR4302540.7641919/1‑94 (MQ=60)
 GTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCA                                                                                              <  SRR4302540.5921354/94‑1 (MQ=60)
  TGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAG                                                                                             <  SRR4302540.4006097/94‑1 (MQ=60)
  TGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAG                                                                                             <  SRR4302540.147513/94‑1 (MQ=60)
  TGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAG                                                                                             <  SRR4302540.3462562/94‑1 (MQ=60)
   GCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGG                                                                                            <  SRR4302540.4640899/94‑1 (MQ=60)
   GCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGG                                                                                            >  SRR4302540.7046128/1‑94 (MQ=60)
    CCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGTCATGCAGGG                                                                                           >  SRR4302540.7393428/1‑94 (MQ=60)
     CTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACGTCCAAAGGTGCCATGCAGGGA                                                                                          >  SRR4302540.6014222/1‑94 (MQ=60)
     CTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACGTCAAAAGGTGCCATGCAGGGT                                                                                          >  SRR4302540.6014223/1‑94 (MQ=60)
     CTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGA                                                                                          <  SRR4302540.5913650/94‑1 (MQ=60)
     CTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGA                                                                                          >  SRR4302540.9384029/1‑94 (MQ=60)
     CTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGA                                                                                          <  SRR4302540.7942144/94‑1 (MQ=60)
     CTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGA                                                                                          >  SRR4302540.9863678/1‑94 (MQ=60)
      TGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGAT                                                                                         <  SRR4302540.6159478/94‑1 (MQ=60)
      TGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGAT                                                                                         <  SRR4302540.2929490/94‑1 (MQ=60)
      TGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGAT                                                                                         <  SRR4302540.6625768/94‑1 (MQ=60)
      TGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGAT                                                                                         <  SRR4302540.3938999/94‑1 (MQ=60)
       GGCATAACGCAGACACAAGCTTGTCATTACCACTACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATG                                                                                        <  SRR4302540.9089322/94‑1 (MQ=60)
       GGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGGGCCATGCAGCGATG                                                                                        >  SRR4302540.9182450/1‑94 (MQ=60)
        GCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGG                                                                                       <  SRR4302540.2036591/94‑1 (MQ=60)
         CATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGC                                                                                      <  SRR4302540.8204143/94‑1 (MQ=60)
         CATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGC                                                                                      >  SRR4302540.5745484/1‑94 (MQ=60)
         CATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGC                                                                                      >  SRR4302540.4698398/1‑94 (MQ=60)
          ATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCG                                                                                     >  SRR4302540.3777790/1‑94 (MQ=60)
          ATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCG                                                                                     >  SRR4302540.2049964/1‑94 (MQ=60)
          ATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCG                                                                                     >  SRR4302540.2104941/1‑94 (MQ=60)
          ATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCG                                                                                     >  SRR4302540.5874566/1‑94 (MQ=60)
          ATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCG                                                                                     >  SRR4302540.1245089/1‑94 (MQ=60)
          ATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCG                                                                                     >  SRR4302540.1702675/1‑94 (MQ=60)
           TAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGA                                                                                    >  SRR4302540.3758246/1‑94 (MQ=60)
           TAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGA                                                                                    <  SRR4302540.1412349/94‑1 (MQ=60)
            AACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGAT                                                                                   <  SRR4302540.3654831/94‑1 (MQ=60)
            AACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGAT                                                                                   <  SRR4302540.9254363/94‑1 (MQ=60)
            AACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGAT                                                                                   >  SRR4302540.1256898/1‑94 (MQ=60)
             ACGCAGAAAAAAGCTTGTCATTACCACAACAAATAGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATT                                                                                  >  SRR4302540.1518527/1‑94 (MQ=60)
              CGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTT                                                                                 >  SRR4302540.5626350/1‑94 (MQ=60)
                CAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCC                                                                               >  SRR4302540.176765/1‑94 (MQ=60)
                CAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCC                                                                               >  SRR4302540.7121615/1‑94 (MQ=60)
                CAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCC                                                                               <  SRR4302540.3081611/94‑1 (MQ=60)
                CAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCC                                                                               <  SRR4302540.9633607/94‑1 (MQ=60)
                 AGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCC                                                                              <  SRR4302540.6082089/94‑1 (MQ=60)
                 AGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCC                                                                              >  SRR4302540.10001636/1‑94 (MQ=60)
                   AAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAG                                                                            >  SRR4302540.1192871/1‑94 (MQ=60)
                   AAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAG                                                                            <  SRR4302540.6358799/94‑1 (MQ=60)
                    AAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGA                                                                           >  SRR4302540.6709406/1‑94 (MQ=60)
                     AAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGAC                                                                          <  SRR4302540.8123352/94‑1 (MQ=60)
                     AAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGAC                                                                          >  SRR4302540.7216634/1‑94 (MQ=60)
                     AAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGAC                                                                          <  SRR4302540.1417475/94‑1 (MQ=60)
                      AAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACG                                                                         <  SRR4302540.521731/94‑1 (MQ=60)
                      AAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACG                                                                         <  SRR4302540.6076901/94‑1 (MQ=60)
                        AGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTT                                                                       >  SRR4302540.2597266/1‑94 (MQ=60)
                         GCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTG                                                                      >  SRR4302540.6265088/1‑94 (MQ=60)
                          CTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGT                                                                     >  SRR4302540.8697154/1‑94 (MQ=60)
                          CTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGT                                                                     <  SRR4302540.8095838/94‑1 (MQ=60)
                          CCTGTCCTTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGT                                                                     <  SRR4302540.4217616/94‑1 (MQ=60)
                           TTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTG                                                                    >  SRR4302540.3968508/1‑94 (MQ=60)
                           TTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTG                                                                    <  SRR4302540.6636549/94‑1 (MQ=60)
                            TGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGG                                                                   >  SRR4302540.1450320/1‑94 (MQ=60)
                            TGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGG                                                                   >  SRR4302540.8815703/1‑94 (MQ=60)
                            TGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGG                                                                   <  SRR4302540.6049543/94‑1 (MQ=60)
                            TGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGG                                                                   <  SRR4302540.6049839/94‑1 (MQ=60)
                             TTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGT                                                                  <  SRR4302540.8650380/94‑1 (MQ=60)
                             GTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGT                                                                  <  SRR4302540.8501849/94‑1 (MQ=60)
                              TCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTG                                                                 <  SRR4302540.4403493/94‑1 (MQ=60)
                                ATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCCAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAT                                                               >  SRR4302540.1110316/1‑94 (MQ=60)
                                ATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAT                                                               >  SRR4302540.7757141/1‑94 (MQ=60)
                                ATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAC                                                               <  SRR4302540.4976391/94‑1 (MQ=60)
                                ATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAC                                                               <  SRR4302540.651191/94‑1 (MQ=60)
                                ATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAC                                                               <  SRR4302540.651192/94‑1 (MQ=60)
                                ATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAC                                                               >  SRR4302540.699180/1‑94 (MQ=60)
                                ATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAC                                                               >  SRR4302540.6942566/1‑94 (MQ=60)
                                 TTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACT                                                              >  SRR4302540.9327423/1‑94 (MQ=60)
                                  TACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTT                                                             >  SRR4302540.5044525/1‑94 (MQ=60)
                                  TACCACAACAAATCGTAATAGGCTTATCCTGAGTATTGAAAACATCAACCGGTCACCAGAAGGGATGGCGATTTCCCAGACGTTGTGGTCACTT                                                             >  SRR4302540.5044797/1‑94 (MQ=53)
                                   ACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTC                                                            >  SRR4302540.1813688/1‑94 (MQ=60)
                                    CCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCAGGACGTTGTGGTGACTTCC                                                           >  SRR4302540.1380370/1‑94 (MQ=60)
                                    CCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCC                                                           <  SRR4302540.7135044/94‑1 (MQ=60)
                                     CACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCC                                                          <  SRR4302540.9559872/94‑1 (MQ=60)
                                     CACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCC                                                          <  SRR4302540.6416622/94‑1 (MQ=60)
                                     CACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCC                                                          >  SRR4302540.2196944/1‑94 (MQ=60)
                                       CAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAG                                                        <  SRR4302540.6862778/94‑1 (MQ=60)
                                       CAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAG                                                        >  SRR4302540.5552795/1‑94 (MQ=60)
                                       CAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAG                                                        <  SRR4302540.6862779/94‑1 (MQ=60)
                                       CAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAG                                                        <  SRR4302540.3255292/94‑1 (MQ=60)
                                       CAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAG                                                        <  SRR4302540.765324/94‑1 (MQ=60)
                                       CAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAG                                                        <  SRR4302540.3961494/94‑1 (MQ=60)
                                         ACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGTCGATTTCCCAGACGTTGTGGTGACTTCCCAGTT                                                      >  SRR4302540.9844199/1‑94 (MQ=60)
                                         ACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTT                                                      <  SRR4302540.3618675/94‑1 (MQ=60)
                                         ACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTT                                                      <  SRR4302540.5133685/94‑1 (MQ=60)
                                          CAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTG                                                     >  SRR4302540.5345197/1‑94 (MQ=60)
                                           AAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGC                                                    <  SRR4302540.4820870/94‑1 (MQ=60)
                                            AATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCG                                                   >  SRR4302540.8147994/1‑94 (MQ=60)
                                             ATCGTAATCGGCTTATCCTGAGGATTGAAAACATCAAAAGGTGCAATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGAGA                                                  >  SRR4302540.7684439/1‑94 (MQ=60)
                                              TCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGAT                                                 <  SRR4302540.4111554/94‑1 (MQ=60)
                                               CGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATA                                                <  SRR4302540.4250427/94‑1 (MQ=60)
                                               CGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATA                                                >  SRR4302540.6117434/1‑94 (MQ=60)
                                               CGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATA                                                >  SRR4302540.683735/1‑94 (MQ=60)
                                               CGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATA                                                >  SRR4302540.1098445/1‑94 (MQ=60)
                                                GTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATAT                                               <  SRR4302540.5883729/94‑1 (MQ=60)
                                                GTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATAT                                               >  SRR4302540.847788/1‑94 (MQ=60)
                                                 TAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATA                                              <  SRR4302540.5358439/94‑1 (MQ=60)
                                                 TAATCGGCTTATCCTGAGGATTGAAAACATCAAAAGGTGCCATGCAGGGATGGGGATTTCCCAGAAGTTGTGTTGACTTCCCAGTTGCGATATA                                              >  SRR4302540.5383065/1‑94 (MQ=60)
                                                  AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT                                             <  SRR4302540.3085147/94‑1 (MQ=60)
                                                  AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT                                             <  SRR4302540.6466345/94‑1 (MQ=60)
                                                  AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT                                             <  SRR4302540.5715823/94‑1 (MQ=60)
                                                  AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT                                             <  SRR4302540.7037576/94‑1 (MQ=60)
                                                  AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT                                             <  SRR4302540.9282008/94‑1 (MQ=60)
                                                  AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT                                             <  SRR4302540.7118358/94‑1 (MQ=60)
                                                  AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT                                             >  SRR4302540.2140359/1‑94 (MQ=60)
                                                   ATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATG                                            >  SRR4302540.8488645/1‑94 (MQ=60)
                                                   ATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATG                                            <  SRR4302540.3020808/94‑1 (MQ=60)
                                                   ATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATA                                            <  SRR4302540.8264809/94‑1 (MQ=60)
                                                     CGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCC                                          >  SRR4302540.1716315/1‑94 (MQ=60)
                                                     CGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCC                                          <  SRR4302540.9271405/94‑1 (MQ=60)
                                                     CGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCC                                          >  SRR4302540.4017895/1‑94 (MQ=60)
                                                      GGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCA                                         <  SRR4302540.61510/94‑1 (MQ=60)
                                                      GGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCA                                         >  SRR4302540.7520418/1‑94 (MQ=60)
                                                       GCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCAT                                        <  SRR4302540.1003261/94‑1 (MQ=60)
                                                        CTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATC                                       <  SRR4302540.633234/94‑1 (MQ=60)
                                                        CTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATC                                       <  SRR4302540.4740845/94‑1 (MQ=60)
                                                        CTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATC                                       >  SRR4302540.3276010/1‑94 (MQ=60)
                                                         TTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCA                                      <  SRR4302540.55858/94‑1 (MQ=60)
                                                         TTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCA                                      >  SRR4302540.6279060/1‑94 (MQ=60)
                                                         TTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCA                                      <  SRR4302540.5183218/94‑1 (MQ=60)
                                                          TATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGGCATCAA                                     >  SRR4302540.7666201/1‑94 (MQ=60)
                                                          TATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAG                                     >  SRR4302540.7666200/1‑94 (MQ=60)
                                                          TATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAG                                     <  SRR4302540.6580263/94‑1 (MQ=60)
                                                          TATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAG                                     <  SRR4302540.9047722/94‑1 (MQ=60)
                                                          TATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAG                                     <  SRR4302540.1638676/94‑1 (MQ=60)
                                                           ATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGA                                    >  SRR4302540.2165949/1‑94 (MQ=60)
                                                            TCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCTTCCGAC                                   >  SRR4302540.1384264/1‑94 (MQ=60)
                                                            TCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGAC                                   <  SRR4302540.6236500/94‑1 (MQ=60)
                                                            TCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGAC                                   <  SRR4302540.7977010/94‑1 (MQ=60)
                                                             CCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACC                                  <  SRR4302540.6087852/94‑1 (MQ=60)
                                                             CCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACC                                  >  SRR4302540.5811366/1‑94 (MQ=60)
                                                             CCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACC                                  <  SRR4302540.9179725/94‑1 (MQ=60)
                                                              CTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGTCATCAGACCA                                 <  SRR4302540.6584958/94‑1 (MQ=60)
                                                              CTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCA                                 >  SRR4302540.6872531/1‑94 (MQ=60)
                                                              CTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCA                                 <  SRR4302540.1953394/94‑1 (MQ=60)
                                                               TGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAT                                >  SRR4302540.6768173/1‑94 (MQ=60)
                                                               TGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCTCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAT                                >  SRR4302540.6778476/1‑94 (MQ=60)
                                                               TGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAT                                <  SRR4302540.9572208/94‑1 (MQ=60)
                                                               TGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAT                                >  SRR4302540.1770441/1‑94 (MQ=60)
                                                               TGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAT                                >  SRR4302540.3154403/1‑94 (MQ=60)
                                                                GAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATG                               <  SRR4302540.2566039/94‑1 (MQ=60)
                                                                GAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATG                               <  SRR4302540.2566040/94‑1 (MQ=60)
                                                                GAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATG                               <  SRR4302540.1419686/94‑1 (MQ=60)
                                                                GAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATG                               <  SRR4302540.4092964/94‑1 (MQ=60)
                                                                GAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATG                               <  SRR4302540.241392/94‑1 (MQ=60)
                                                                 AGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGC                              >  SRR4302540.9304530/1‑94 (MQ=60)
                                                                 AGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGC                              <  SRR4302540.1819055/94‑1 (MQ=60)
                                                                 AGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGC                              >  SRR4302540.5772622/1‑94 (MQ=60)
                                                                 AGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGC                              <  SRR4302540.5310620/94‑1 (MQ=60)
                                                                  GTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCT                             <  SRR4302540.1574003/94‑1 (MQ=60)
                                                                    ATTGAAAACATCAAAAGGTGCCATTCAGGGATGGCGATTTTCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCC                           >  SRR4302540.2088630/1‑94 (MQ=60)
                                                                     TTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCA                          <  SRR4302540.4381398/94‑1 (MQ=60)
                                                                     TTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCA                          >  SRR4302540.8351546/1‑94 (MQ=60)
                                                                     TTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCA                          <  SRR4302540.5231767/94‑1 (MQ=60)
                                                                     TTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGGGACTTCCCAGTGGCGATATATGCCATCAGACCATGCACCA                          <  SRR4302540.4381397/94‑1 (MQ=60)
                                                                      TGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAG                         <  SRR4302540.495849/94‑1 (MQ=60)
                                                                      TGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAG                         <  SRR4302540.1865334/94‑1 (MQ=60)
                                                                       GAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGA                        >  SRR4302540.9704644/1‑94 (MQ=60)
                                                                       GAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGA                        >  SRR4302540.9704643/1‑94 (MQ=60)
                                                                        AAAACATCAAAATGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAA                       >  SRR4302540.3712019/1‑94 (MQ=60)
                                                                         AAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAA                      <  SRR4302540.5375276/94‑1 (MQ=60)
                                                                          AACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAA                     >  SRR4302540.9410948/1‑94 (MQ=60)
                                                                            CATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACT                   <  SRR4302540.8531836/94‑1 (MQ=60)
                                                                            CATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACT                   >  SRR4302540.5834269/1‑94 (MQ=60)
                                                                            CATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACT                   <  SRR4302540.4269917/94‑1 (MQ=60)
                                                                              TCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCA                 >  SRR4302540.9532740/1‑94 (MQ=60)
                                                                              TCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCA                 <  SRR4302540.8353326/94‑1 (MQ=60)
                                                                               CAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTTACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAG                <  SRR4302540.9875236/94‑1 (MQ=60)
                                                                               CAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAG                <  SRR4302540.2456878/94‑1 (MQ=60)
                                                                               CAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCATTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAG                >  SRR4302540.6520691/1‑94 (MQ=60)
                                                                               CAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAG                >  SRR4302540.6520692/1‑94 (MQ=60)
                                                                                 AAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCG              <  SRR4302540.9050297/94‑1 (MQ=60)
                                                                                 AAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCG              <  SRR4302540.8643527/94‑1 (MQ=60)
                                                                                  AAGGTGCCATGCAGGGATGGCGATTTTCCAGAAGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGT             >  SRR4302540.9926663/1‑94 (MQ=60)
                                                                                   AGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTG            <  SRR4302540.10063725/94‑1 (MQ=60)
                                                                                    GGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGG           >  SRR4302540.2602649/1‑94 (MQ=60)
                                                                                    GGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGG           >  SRR4302540.6186188/1‑94 (MQ=60)
                                                                                     GTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGC          <  SRR4302540.4832257/94‑1 (MQ=60)
                                                                                      GGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCA         <  SRR4302540.5271621/94‑1 (MQ=60)
                                                                                       GCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCAT        <  SRR4302540.7343066/94‑1 (MQ=60)
                                                                                        CCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATC       >  SRR4302540.6382366/1‑94 (MQ=60)
                                                                                          ATGCAGGGATGGCGATTTCCTAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAA     >  SRR4302540.9740952/1‑94 (MQ=60)
                                                                                          ATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAA     <  SRR4302540.6145388/94‑1 (MQ=60)
                                                                                          ATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAA     >  SRR4302540.9477414/1‑94 (MQ=60)
                                                                                          ATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAA     >  SRR4302540.2527573/1‑94 (MQ=60)
                                                                                          ATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAA     >  SRR4302540.1249518/1‑94 (MQ=60)
                                                                                           TGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAA    <  SRR4302540.3209510/94‑1 (MQ=60)
                                                                                             GAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAACA  <  SRR4302540.2699478/94‑1 (MQ=60)
                                                                                             CAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAACA  >  SRR4302540.2892609/1‑94 (MQ=60)
                                                                                             |                                                                                             
AGTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAACA  >  NC_000913/2486392‑2486578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑