Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,486,485 |
T→C |
Y248C (TAC→TGC) |
yfdE ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,486,485 | 0 | T | C | 100.0%
| 699.3
/ NA
| 214 | Y248C (TAC→TGC) | yfdE | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (92/122); total (92/122) |
Only 100 of 218 total aligned reads displayed.
GCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCA > NC_000913/2486395‑2486574
|
gCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAg > 2:199672/1‑93 (MQ=255)
gCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTACCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAg < 2:1687538/93‑1 (MQ=255)
ccTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAgg < 2:4906870/93‑1 (MQ=255)
ccTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAgg < 2:481277/93‑1 (MQ=255)
cTGTCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAggg < 2:4945586/93‑1 (MQ=255)
cTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAggg < 2:3474596/93‑1 (MQ=255)
cTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAggg > 2:833692/1‑93 (MQ=255)
cTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAggg < 1:4075942/93‑1 (MQ=255)
gCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATg > 1:3148060/1‑93 (MQ=255)
aTAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGc > 2:3915557/1‑93 (MQ=255)
aaCGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGa < 1:5155749/93‑1 (MQ=255)
aCGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGAt < 2:2750113/93‑1 (MQ=255)
aCGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGAt < 1:2549003/93‑1 (MQ=255)
cGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGAtt > 1:3472472/1‑93 (MQ=255)
cAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTc > 2:2340646/1‑93 (MQ=255)
gAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTccc > 1:3673394/1‑93 (MQ=255)
gAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTccc > 1:5353425/1‑93 (MQ=255)
aaaaaaGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCATGGATGGCGATTTCTCa > 1:4872045/1‑93 (MQ=255)
aaaaaaGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCa < 2:3517208/93‑1 (MQ=255)
aaaaaGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAg > 2:1800760/1‑93 (MQ=255)
aaaaGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGa < 2:2856546/93‑1 (MQ=255)
aaaaGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGa < 1:1068866/93‑1 (MQ=255)
aaaaGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGa > 1:3280582/1‑93 (MQ=255)
aaaGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGAc > 2:2658432/1‑93 (MQ=255)
aGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGt < 2:5551628/93‑1 (MQ=255)
gCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGtt < 1:120706/93‑1 (MQ=255)
gCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGtt < 1:4915134/93‑1 (MQ=255)
cTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTtg > 2:3587440/1‑93 (MQ=255)
ttCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCCATTTCCCAGCCGTTgtgg < 1:915170/92‑1 (MQ=255)
tCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTgtggt > 2:4145424/1‑93 (MQ=255)
tCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTgtggt < 2:5611620/93‑1 (MQ=255)
tCATAACCACAACAAATCGTAATCAGATTATCCTGAGTATTGAAAACATCAAAAGGTGCAATGCAGGGATGGCGATTTCCCAGACGTTgtggt < 1:1381445/93‑1 (MQ=255)
aTTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGa > 2:467734/1‑93 (MQ=255)
aTTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGa > 1:828978/1‑93 (MQ=255)
aTTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGa > 1:1150961/1‑93 (MQ=255)
ttACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAc > 1:1992978/1‑93 (MQ=255)
aCCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACtt > 1:2761410/1‑93 (MQ=255)
ccACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTc > 2:4505104/1‑93 (MQ=255)
ccACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTc < 1:1470433/93‑1 (MQ=255)
aacaaATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAg < 1:2285343/93‑1 (MQ=255)
acaaATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGt < 2:5062552/93‑1 (MQ=255)
caaATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGtt > 2:5858137/1‑93 (MQ=255)
aaaTCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTg > 2:5497741/1‑93 (MQ=255)
aaTCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGc < 2:2551635/93‑1 (MQ=255)
aaTCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGc < 1:2813599/93‑1 (MQ=255)
aaTCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGc < 1:3220771/93‑1 (MQ=255)
tAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatat < 1:5281918/93‑1 (MQ=255)
aaTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatata < 1:4749060/93‑1 (MQ=255)
aaTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatata < 1:1764542/93‑1 (MQ=255)
aaTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatata > 2:6229705/1‑93 (MQ=255)
aaTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatata < 1:5596321/93‑1 (MQ=255)
aTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatatat < 2:5820082/93‑1 (MQ=255)
aTCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGatatat > 2:2617898/1‑93 (MQ=255)
tCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATg > 1:754101/1‑93 (MQ=255)
tCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATg > 1:3877444/1‑93 (MQ=255)
cGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGc < 2:6091492/93‑1 (MQ=255)
cGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGc > 1:4139616/1‑93 (MQ=255)
cGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGc > 2:4350439/1‑93 (MQ=255)
ggCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGcc < 2:1485958/93‑1 (MQ=255)
tATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCa > 1:6142805/1‑93 (MQ=255)
tATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCa < 2:531165/93‑1 (MQ=255)
tCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGa > 2:4138539/1‑93 (MQ=255)
ccTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGAc < 1:5928665/93‑1 (MQ=255)
gAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAt < 2:3390591/93‑1 (MQ=255)
gAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAt < 2:5214899/93‑1 (MQ=255)
aGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATg < 1:4512059/93‑1 (MQ=255)
tATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCt > 2:1204712/1‑93 (MQ=255)
tATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCt > 2:2825764/1‑93 (MQ=255)
tATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCt > 2:1956031/1‑93 (MQ=255)
tATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCt < 2:2374194/93‑1 (MQ=255)
aTTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTc < 1:3775561/93‑1 (MQ=255)
aTTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTc > 1:4587304/1‑93 (MQ=255)
aTTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTc < 1:6013597/93‑1 (MQ=255)
ttGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTcc > 2:3944003/1‑93 (MQ=255)
ttGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGATcc > 1:3742656/1‑93 (MQ=255)
tGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTccg > 2:4872940/1‑92 (MQ=255)
tGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCa < 1:6061733/93‑1 (MQ=255)
tGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCa < 1:6234103/93‑1 (MQ=255)
gAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAg > 1:4378010/1‑93 (MQ=255)
aaaaCATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGa < 2:3646944/93‑1 (MQ=255)
aaaCATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGaa < 2:308/93‑1 (MQ=255)
aaaCATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGaa > 2:1726919/1‑93 (MQ=255)
aTCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACt > 2:953577/1‑93 (MQ=255)
aTCAAAAGGTGCCATGCAGGGATGGCGATTGCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACt < 2:244038/93‑1 (MQ=255)
tCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTc > 1:5246253/1‑93 (MQ=255)
tCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTc < 2:5709730/93‑1 (MQ=255)
tCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTc < 2:3706841/93‑1 (MQ=255)
cAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCa > 1:5031824/1‑93 (MQ=255)
cAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCa < 1:591816/93‑1 (MQ=255)
cAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCa < 1:5638562/93‑1 (MQ=255)
aaaaGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAg < 2:3993074/93‑1 (MQ=255)
aaaaGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAg < 2:2916581/93‑1 (MQ=255)
aaaaGGGGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCACACCATGCTCCAGAAAACTCAg > 1:3783626/1‑93 (MQ=255)
aaGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCg > 1:953051/1‑93 (MQ=255)
aGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGt < 2:5395833/93‑1 (MQ=255)
ggTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTg < 1:2606229/93‑1 (MQ=255)
tGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGc < 2:86805/93‑1 (MQ=255)
gCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCa < 1:3710084/93‑1 (MQ=255)
gCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCa < 1:3059732/93‑1 (MQ=255)
ccATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCAt < 1:5467745/93‑1 (MQ=255)
|
GCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCA > NC_000913/2486395‑2486574
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAACA > NC_000913/2486392‑2486578
|
AGTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGC < SRR4302533.5400073/94‑1 (MQ=60)
GTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCA < SRR4302533.1173434/94‑1 (MQ=60)
TGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAG < SRR4302533.2399536/94‑1 (MQ=60)
GCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGG < SRR4302533.718201/94‑1 (MQ=60)
GCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGG > SRR4302533.2814475/1‑94 (MQ=60)
CTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGA < SRR4302533.4100753/94‑1 (MQ=60)
TGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGAT < SRR4302533.5731549/94‑1 (MQ=60)
GGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATG > SRR4302533.3167413/1‑94 (MQ=60)
ATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCG < SRR4302533.3948777/94‑1 (MQ=60)
ATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCG < SRR4302533.3806345/94‑1 (MQ=60)
AACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGAT < SRR4302533.5186882/94‑1 (MQ=60)
ACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATT < SRR4302533.2564695/94‑1 (MQ=60)
ACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATT > SRR4302533.3493901/1‑94 (MQ=60)
CGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTT > SRR4302533.3255828/1‑94 (MQ=60)
CAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCC > SRR4302533.5208784/1‑94 (MQ=60)
AGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATGAAAAGGTGCCATGCAGGGATGGCGAATTCCC > SRR4302533.3695970/1‑94 (MQ=60)
AGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCC > SRR4302533.3695969/1‑94 (MQ=60)
AGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCC < SRR4302533.1099530/94‑1 (MQ=60)
AGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCC > SRR4302533.5385555/1‑94 (MQ=60)
GAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCATGGATGGCGATTTCTCA > SRR4302533.4901566/1‑94 (MQ=60)
AAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGA > SRR4302533.3300834/1‑94 (MQ=60)
AAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGA > SRR4302533.2890062/1‑94 (MQ=60)
AAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGAC > SRR4302533.5672592/1‑94 (MQ=60)
AAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGAC < SRR4302533.4870895/94‑1 (MQ=60)
AAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGAC < SRR4302533.1075160/94‑1 (MQ=60)
AAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGT > SRR4302533.4132039/1‑94 (MQ=60)
AGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTT < SRR4302533.2161734/94‑1 (MQ=60)
GCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTG < SRR4302533.930854/94‑1 (MQ=60)
GCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTG < SRR4302533.4944908/94‑1 (MQ=60)
GCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTG < SRR4302533.121470/94‑1 (MQ=60)
TTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTG > SRR4302533.4203056/1‑94 (MQ=60)
TTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCCATTTCCCAGCCGTTGTGGT < SRR4302533.920549/94‑1 (MQ=60)
TCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTG < SRR4302533.866245/94‑1 (MQ=60)
TCATAACCACAACAAATCGTAATCAGATTATCCTGAGTATTGAAAACATCAAAAGGTGCAATGCAGGGATGGCGATTTCCCAGACGTTGTGGTG < SRR4302533.1389761/94‑1 (MQ=60)
CATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGA > SRR4302533.833840/1‑94 (MQ=60)
CATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGA > SRR4302533.1157856/1‑94 (MQ=60)
ATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAC > SRR4302533.129413/1‑94 (MQ=60)
ATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGAC > SRR4302533.2005200/1‑94 (MQ=60)
TTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACT < SRR4302533.5282657/94‑1 (MQ=60)
TTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACT < SRR4302533.5957913/94‑1 (MQ=60)
TACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTT > SRR4302533.2778336/1‑94 (MQ=60)
CCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCC < SRR4302533.1479295/94‑1 (MQ=60)
CACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCC > SRR4302533.1183463/1‑94 (MQ=60)
ACAACAAATCGTAATCGGCTTATCCTGAGTATTGTAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCA < SRR4302533.5352243/94‑1 (MQ=60)
CAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAG > SRR4302533.5524559/1‑94 (MQ=60)
AACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGT < SRR4302533.2299490/94‑1 (MQ=60)
ACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTT < SRR4302533.3341405/94‑1 (MQ=60)
CAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTG > SRR4302533.1676357/1‑94 (MQ=60)
AATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCG < SRR4302533.2830915/94‑1 (MQ=60)
AATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCG < SRR4302533.4728268/94‑1 (MQ=60)
AATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCG < SRR4302533.3240631/94‑1 (MQ=60)
GTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATAT > SRR4302533.4482902/1‑94 (MQ=60)
TAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATA > SRR4302533.6160068/1‑94 (MQ=60)
TAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATA < SRR4302533.5313565/94‑1 (MQ=60)
AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT < SRR4302533.1775286/94‑1 (MQ=60)
AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT < SRR4302533.4940058/94‑1 (MQ=60)
AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT < SRR4302533.5630134/94‑1 (MQ=60)
AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT < SRR4302533.4777855/94‑1 (MQ=60)
AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAT < SRR4302533.4758615/94‑1 (MQ=60)
AATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATAG > SRR4302533.3910490/1‑94 (MQ=60)
ATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATG > SRR4302533.758540/1‑94 (MQ=60)
ATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATG > SRR4302533.3901108/1‑94 (MQ=60)
TCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGC > SRR4302533.4164724/1‑94 (MQ=60)
GCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCAT < SRR4302533.5427508/94‑1 (MQ=60)
CTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATC > SRR4302533.795377/1‑94 (MQ=60)
TTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCA > SRR4302533.6179796/1‑94 (MQ=60)
TATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAG < SRR4302533.3761341/94‑1 (MQ=60)
ATCCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGA > SRR4302533.4592123/1‑94 (MQ=60)
CCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACC > SRR4302533.3876578/1‑94 (MQ=60)
CCTGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACC < SRR4302533.5964500/94‑1 (MQ=60)
TGAGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCAT > SRR4302533.2533188/1‑94 (MQ=60)
AGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGC > SRR4302533.5926466/1‑94 (MQ=60)
AGTATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGC < SRR4302533.4539381/94‑1 (MQ=60)
TATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTC > SRR4302533.1444008/1‑94 (MQ=60)
TATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTC > SRR4302533.4615092/1‑94 (MQ=60)
ATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCC < SRR4302533.3798704/94‑1 (MQ=60)
ATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCC < SRR4302533.6050038/94‑1 (MQ=60)
ATTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGATCC > SRR4302533.3765611/1‑94 (MQ=60)
TTGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCA < SRR4302533.5285081/94‑1 (MQ=60)
TGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAG < SRR4302533.6098428/94‑1 (MQ=60)
TGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAG > SRR4302533.4404442/1‑94 (MQ=60)
TGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAG < SRR4302533.6271427/94‑1 (MQ=60)
TGAAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAG < SRR4302533.2644705/94‑1 (MQ=60)
AAAACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAA > SRR4302533.5118332/1‑94 (MQ=60)
ACATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAAC < SRR4302533.3173998/94‑1 (MQ=60)
ATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTC < SRR4302533.3086253/94‑1 (MQ=60)
ATCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTC > SRR4302533.5277800/1‑94 (MQ=60)
TCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCA < SRR4302533.3781760/94‑1 (MQ=60)
TCAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCA > SRR4302533.5062289/1‑94 (MQ=60)
CAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAG < SRR4302533.2870753/94‑1 (MQ=60)
CAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAG < SRR4302533.5672652/94‑1 (MQ=60)
CAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAG > SRR4302533.1910296/1‑94 (MQ=60)
CAAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAG < SRR4302533.595311/94‑1 (MQ=60)
CAAAAGGGGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCACACCATGCTCCAGAAAACTCAG > SRR4302533.3806793/1‑94 (MQ=60)
AAAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGC < SRR4302533.5047581/94‑1 (MQ=60)
AAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGTAAACTGAGCG > SRR4302533.3495625/1‑94 (MQ=60)
AAAGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCG > SRR4302533.958649/1‑94 (MQ=60)
AGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTG < SRR4302533.6072521/94‑1 (MQ=60)
AGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTG > SRR4302533.6231549/1‑94 (MQ=60)
AGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTG > SRR4302533.2575185/1‑94 (MQ=60)
AGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTG < SRR4302533.660614/94‑1 (MQ=60)
AGGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTG < SRR4302533.1908052/94‑1 (MQ=60)
GGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGG > SRR4302533.596950/1‑94 (MQ=60)
GGTGCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGG < SRR4302533.2622237/94‑1 (MQ=60)
GCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCAT < SRR4302533.3732869/94‑1 (MQ=60)
GCCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCAT < SRR4302533.3078508/94‑1 (MQ=60)
CCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATC < SRR4302533.3682984/94‑1 (MQ=60)
CCATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATC < SRR4302533.5500699/94‑1 (MQ=60)
ATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAA > SRR4302533.2078880/1‑94 (MQ=60)
ATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAA > SRR4302533.6308473/1‑94 (MQ=60)
ATGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAA > SRR4302533.3281655/1‑94 (MQ=60)
TGCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAA > SRR4302533.96461/1‑94 (MQ=60)
GCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAAC > SRR4302533.1271305/1‑94 (MQ=60)
GCAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAAC < SRR4302533.3383305/94‑1 (MQ=60)
CAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAACA > SRR4302533.1029236/1‑94 (MQ=60)
|
AGTGCCTGGCATAACGCAGAAAAAAGCTTGTCATTACCACAACAAATCGTAATCGGCTTATCCTGAGTATTGAAAACATCAAAAGGTGCCATGTAGGGATGGCGATTTCCCAGACGTTGTGGTGACTTCCCAGTTGCGATATATGCCATCAGACCATGCTCCAGAAAACTCAGCGTGGCATCAAACA > NC_000913/2486392‑2486578
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
