Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,487,208	(A)_6→5	coding (20/1185 nt)	yfdE ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,487,203	0	A	.	99.2%	1752.9 / 3.9	388	coding (25/1185 nt)	yfdE	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/3); new base . (204/180); total (205/183)
Fisher's exact test for biased strand distribution p-value = 1.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01

Only 100 of 437 total aligned reads displayed.

GAAAGGTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGAAAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACA  >  NC_000913/2487111‑2487293

gAAAGGTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGa                                                                                            <  2:7281782/93‑1 (MQ=255)

 aaaGGTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGaa                                                                                           >  1:5869813/1‑93 (MQ=255)

 aaaGGTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGACCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGaa                                                                                           >  2:6840832/1‑93 (MQ=255)

  aaGGTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGaaa                                                                                          >  2:3391391/1‑93 (MQ=255)

    ggTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGaaaaa                                                                                        <  2:3227761/93‑1 (MQ=255)

    ggTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGaaaaa                                                                                        >  2:1984793/1‑93 (MQ=255)

      tCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGaaaaagc                                                                                      >  1:7082370/1‑91 (MQ=255)

       ccATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGaaaaagcc                                                                                     >  2:9889137/1‑90 (MQ=255)

        cATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGaaaaagccg                                                                                    >  2:9000998/1‑89 (MQ=255)

        cATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGaaaaagccg                                                                                    >  2:7909568/1‑89 (MQ=255)

        cATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGaaaaagccg                                                                                    <  2:6087447/93‑5 (MQ=255)

         aTTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGa                                                                                  >  1:7994752/1‑93 (MQ=255)

          ttAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGaa                                                                                 >  2:4491138/1‑93 (MQ=255)

          ttAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGaa                                                                                 >  2:4902386/1‑93 (MQ=255)

           tAAGGACATGTGTCATATCGATAACTAATACGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAg                                                                                <  1:6028174/93‑1 (MQ=255)

           tAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAg                                                                                >  1:4935439/1‑93 (MQ=255)

            aaGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAgg                                                                               >  2:3070262/1‑93 (MQ=255)

            aaGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAgg                                                                               <  2:2127942/93‑1 (MQ=255)

             aGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGt                                                                              <  2:5066825/93‑1 (MQ=255)

             aGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGt                                                                              <  1:5173704/93‑1 (MQ=255)

             aGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGt                                                                              >  1:9498034/1‑93 (MQ=255)

             aGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGt                                                                              <  1:8490410/93‑1 (MQ=255)

              ggACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTg                                                                             <  1:266258/93‑1 (MQ=255)

               gACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGa                                                                            >  2:2681929/1‑93 (MQ=255)

                     tgtCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGac                                                                      >  2:6025514/1‑93 (MQ=255)

                      gtCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGaca                                                                     >  1:2798233/1‑93 (MQ=255)

                       tCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGacac                                                                    >  1:1506687/1‑93 (MQ=255)

                        cATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACt                                                                   <  1:1148627/93‑1 (MQ=255)

                        cATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACt                                                                   >  1:10023538/1‑93 (MQ=255)

                        cATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACt                                                                   <  2:3482003/93‑1 (MQ=255)

                         atatCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACtt                                                                  >  2:5700811/1‑93 (MQ=255)

                         atatCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACtt                                                                  <  2:6429610/93‑1 (MQ=255)

                         atatCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACtt                                                                  <  1:368543/93‑1 (MQ=255)

                          tatCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTc                                                                 >  2:8602303/1‑93 (MQ=255)

                          tatCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTc                                                                 <  2:8289976/93‑1 (MQ=255)

                           atCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCg                                                                <  2:411459/93‑1 (MQ=255)

                            tCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCgg                                                               <  1:230254/93‑1 (MQ=255)

                             cGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGc                                                              >  2:8788645/1‑93 (MQ=255)

                                tAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCAtt                                                           <  2:7400590/93‑1 (MQ=255)

                                  aCTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTa                                                         <  2:5814950/93‑1 (MQ=255)

                                    taataaGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATg                                                       >  1:734940/1‑93 (MQ=255)

                                     aataaGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGAAAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATg                                                       <  2:1057146/93‑1 (MQ=255)

                                     aataaGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGt                                                      <  2:7759017/93‑1 (MQ=255)

                                     aataaGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGt                                                      >  1:429871/1‑93 (MQ=255)

                                       taaGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTaa                                                    <  1:9399814/93‑1 (MQ=255)

                                       taaGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTaa                                                    <  1:7909567/93‑1 (MQ=255)

                                        aaGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTaaa                                                   <  2:4781604/93‑1 (MQ=255)

                                        aaGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTaaa                                                   <  2:2536785/93‑1 (MQ=255)

                                        aaGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGGGACAAGACACTTCGGCATTTATGTaaa                                                   >  1:1721095/1‑93 (MQ=255)

                                         aGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTaaaa                                                  >  1:7227803/1‑93 (MQ=255)

                                            cTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCa                                               >  2:7588649/1‑93 (MQ=255)

                                             ttCAAACGGCCCTTTGCTTTCATTATTTGTGATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCaa                                              >  1:5505329/1‑93 (MQ=255)

                                             ttCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTCACAAGACACTTCGGCATTTATGTAAAATCaa                                              >  2:9819735/1‑93 (MQ=255)

                                              tCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAAt                                             <  2:6718898/93‑1 (MQ=255)

                                               cAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATa                                            <  1:4552151/93‑1 (MQ=255)

                                               cAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCAGTTATGTAAAATCAATa                                            <  1:5430479/93‑1 (MQ=255)

                                                 aaCGGCCCTTTGCTTTCATTATTTGTCATTTGCTTTTGCCTTG‑AAAAAGCGGAAGGGGAAAAGAACTTTCGCCTTTTTTGAAAAATCAATaca                                          >  1:4092131/1‑91 (MQ=255)

                                                 aaCGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAAc                                          >  2:1535710/1‑93 (MQ=255)

                                                  aCGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACa                                         <  2:7808729/93‑1 (MQ=255)

                                                  aCGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACa                                         >  1:7644812/1‑93 (MQ=255)

                                                    ggCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATg                                       >  1:7713489/1‑93 (MQ=255)

                                                     gCCTTTTGTTTTCATTTTTTGTCATTGGTTTATG‑CTTAAAAAAAGCCGAAGGTAAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGa                                      <  1:1913858/93‑1 (MQ=255)

                                                     gCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGa                                      >  1:8690781/1‑93 (MQ=255)

                                                      cccTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGat                                     >  2:5461420/1‑93 (MQ=255)

                                                       ccTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGatt                                    <  2:7193711/93‑1 (MQ=255)

                                                         tttGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGattaa                                  >  2:3526640/1‑93 (MQ=255)

                                                         tttGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGattaa                                  >  2:4217387/1‑93 (MQ=255)

                                                         tttGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGattaa                                  <  1:216247/93‑1 (MQ=255)

                                                         tttGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGattaa                                  >  1:5640677/1‑93 (MQ=255)

                                                              tttCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATg                             <  1:3171732/93‑1 (MQ=255)

                                                              tttCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATg                             >  2:2435521/1‑93 (MQ=255)

                                                              tttCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATg                             >  1:6525426/1‑93 (MQ=255)

                                                              tttCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCAAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATg                             <  2:4353186/93‑1 (MQ=255)

                                                                 cATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACCCTTCGGAATTTATGTAAAATCAATAACATGATTAATTATGgaa                          >  1:626537/1‑93 (MQ=255)

                                                                  attattTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAAc                         <  2:3971829/93‑1 (MQ=255)

                                                                   ttattTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAAcc                        >  2:3893498/1‑93 (MQ=255)

                                                                   ttattTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAAcc                        <  2:2299296/93‑1 (MQ=255)

                                                                    tattTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCa                       >  1:1586153/1‑93 (MQ=255)

                                                                    tattTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCa                       <  2:4632149/93‑1 (MQ=255)

                                                                    tattTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCa                       <  2:9349716/93‑1 (MQ=255)

                                                                      tttGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGt                     >  1:4698829/1‑93 (MQ=255)

                                                                      tttGTCAGTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGt                     <  1:8379891/93‑1 (MQ=255)

                                                                       ttGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTc                    <  1:9100552/93‑1 (MQ=255)

                                                                        tGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCg                   <  2:1747711/93‑1 (MQ=255)

                                                                         gTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGa                  <  2:8167783/93‑1 (MQ=255)

                                                                          tCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGAc                 >  2:943585/1‑93 (MQ=255)

                                                                           cATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACt                <  2:5263032/93‑1 (MQ=255)

                                                                            aTTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTg               <  2:1843187/93‑1 (MQ=255)

                                                                             tttGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGa              >  1:6705510/1‑93 (MQ=255)

                                                                             tttGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGa              <  2:3689793/93‑1 (MQ=255)

                                                                               tGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACa            <  1:490508/93‑1 (MQ=255)

                                                                                 cTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATa          >  1:3065853/1‑93 (MQ=255)

                                                                                  ttATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATaa         <  2:1633385/93‑1 (MQ=255)

                                                                                   tATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATaaa        >  1:8076882/1‑93 (MQ=255)

                                                                                    aTGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAAt       >  1:3887800/1‑93 (MQ=255)

                                                                                     tGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATc      >  1:3422743/1‑93 (MQ=255)

                                                                                     tGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATc      >  1:987129/1‑93 (MQ=255)

                                                                                     tGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATc      >  2:9520585/1‑93 (MQ=255)

                                                                                       ccTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCca    >  2:2724402/1‑93 (MQ=255)

                                                                                         ttGAAAAAA‑CCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCcaca  <  2:8035194/93‑1 (MQ=255)

GAAAGGTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGAAAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACA  >  NC_000913/2487111‑2487293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 205 total aligned reads displayed.

GGTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGAAAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCC  >  NC_000913/2487115‑2487301

GGTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGAAAAAG                                                                                               <  SRR4302540.1525232/94‑1 (MQ=60)

  TCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCC                                                                                            <  SRR4302540.4705555/94‑1 (MQ=60)

  TCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCC                                                                                            <  SRR4302540.4705556/94‑1 (MQ=60)

   CCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCG                                                                                           >  SRR4302540.2020715/1‑94 (MQ=60)

    CATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGA                                                                                          <  SRR4302540.6909511/94‑1 (MQ=60)

    CATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGA                                                                                          >  SRR4302540.8087818/1‑94 (MQ=60)

    CATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGA                                                                                          >  SRR4302540.2993914/1‑94 (MQ=60)

    CATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGA                                                                                          <  SRR4302540.4473842/94‑1 (MQ=60)

    CATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGA                                                                                          >  SRR4302540.4496354/1‑94 (MQ=60)

     ATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAA                                                                                         >  SRR4302540.3005245/1‑94 (MQ=60)

      TTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAG                                                                                        >  SRR4302540.4988671/1‑94 (MQ=60)

       TAAGGACATGTGTCATATCGATAACTAATACGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGG                                                                                       <  SRR4302540.6095064/94‑1 (MQ=60)

       TAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGG                                                                                       <  SRR4302540.6095063/94‑1 (MQ=60)

        AAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGT                                                                                      >  SRR4302540.9610592/1‑94 (MQ=60)

         AGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTG                                                                                     <  SRR4302540.8589061/94‑1 (MQ=60)

         AGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTG                                                                                     <  SRR4302540.5230015/94‑1 (MQ=60)

          GGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGA                                                                                    <  SRR4302540.8102293/94‑1 (MQ=60)

          GGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGA                                                                                    <  SRR4302540.268872/94‑1 (MQ=60)

          GGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGA                                                                                    <  SRR4302540.268873/94‑1 (MQ=60)

           GACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAA                                                                                   <  SRR4302540.1184906/94‑1 (MQ=60)

           GACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAA                                                                                   <  SRR4302540.3130462/94‑1 (MQ=60)

           GACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAA                                                                                   <  SRR4302540.5233416/94‑1 (MQ=60)

            ACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAA                                                                                  >  SRR4302540.9253381/1‑94 (MQ=60)

             CATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAA                                                                                 >  SRR4302540.2587506/1‑94 (MQ=60)

             CATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAA                                                                                 >  SRR4302540.7394061/1‑94 (MQ=60)

             CATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAA                                                                                 <  SRR4302540.9410471/94‑1 (MQ=60)

              ATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAG                                                                                <  SRR4302540.8628037/94‑1 (MQ=60)

              ATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATGTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAG                                                                                <  SRR4302540.8628036/94‑1 (MQ=60)

               TGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGA                                                                               <  SRR4302540.5905963/94‑1 (MQ=60)

                GTGTCATATCGATAACTAATAAGCCTTCCAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTACGCCTTG‑AAAAAGCCGAAGGTGAAAAGAC                                                                              >  SRR4302540.7002246/1‑94 (MQ=60)

                GTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGAC                                                                              >  SRR4302540.831833/1‑94 (MQ=60)

                 TGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACA                                                                             >  SRR4302540.2828447/1‑94 (MQ=60)

                  GTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACAC                                                                            >  SRR4302540.7730937/1‑94 (MQ=60)

                  GTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACAC                                                                            >  SRR4302540.1824078/1‑94 (MQ=60)

                  GTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACAC                                                                            >  SRR4302540.1824077/1‑94 (MQ=60)

                  GTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACAC                                                                            >  SRR4302540.6902043/1‑94 (MQ=60)

                  GTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACAC                                                                            >  SRR4302540.1523318/1‑94 (MQ=60)

                   TCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACT                                                                           >  SRR4302540.4980346/1‑94 (MQ=60)

                   TCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACT                                                                           <  SRR4302540.3722821/94‑1 (MQ=60)

                   TCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACT                                                                           >  SRR4302540.10140172/1‑94 (MQ=60)

                   TCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACT                                                                           >  SRR4302540.8110191/1‑94 (MQ=60)

                   TCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACT                                                                           <  SRR4302540.9243611/94‑1 (MQ=60)

                   TCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACT                                                                           <  SRR4302540.2325048/94‑1 (MQ=60)

                    CATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTT                                                                          <  SRR4302540.1160333/94‑1 (MQ=60)

                    CATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTT                                                                          <  SRR4302540.1160602/94‑1 (MQ=60)

                     ATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTC                                                                         >  SRR4302540.6258477/1‑94 (MQ=60)

                     ATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTC                                                                         >  SRR4302540.4213041/1‑94 (MQ=60)

                     ATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTC                                                                         <  SRR4302540.372342/94‑1 (MQ=60)

                      TATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCG                                                                        <  SRR4302540.3686492/94‑1 (MQ=60)

                       ATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGG                                                                       >  SRR4302540.8722021/1‑94 (MQ=60)

                        TCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGC                                                                      <  SRR4302540.232481/94‑1 (MQ=60)

                        TCGATAACTAATAAGCCTTCAAACGGACCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGC                                                                      <  SRR4302540.817964/94‑1 (MQ=60)

                         CGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCA                                                                     <  SRR4302540.4986692/94‑1 (MQ=60)

                         CGATAACTAATAAGCCTGCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCA                                                                     <  SRR4302540.5142438/94‑1 (MQ=60)

                            TAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTT                                                                  <  SRR4302540.9155674/94‑1 (MQ=60)

                             AACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTA                                                                 >  SRR4302540.7216877/1‑94 (MQ=60)

                              ACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTAT                                                                <  SRR4302540.9041143/94‑1 (MQ=60)

                              ACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTAT                                                                <  SRR4302540.8559292/94‑1 (MQ=60)

                              ACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTAT                                                                <  SRR4302540.2951073/94‑1 (MQ=60)

                              ACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTAT                                                                <  SRR4302540.9135244/94‑1 (MQ=60)

                               CTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATG                                                               >  SRR4302540.9936000/1‑94 (MQ=60)

                               CTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATG                                                               >  SRR4302540.742798/1‑94 (MQ=60)

                               CTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATG                                                               >  SRR4302540.10106253/1‑94 (MQ=60)

                               CTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATG                                                               <  SRR4302540.9538624/94‑1 (MQ=60)

                                TAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGT                                                              >  SRR4302540.856536/1‑94 (MQ=60)

                                TAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGT                                                              >  SRR4302540.434399/1‑94 (MQ=60)

                                TAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGT                                                              <  SRR4302540.6266868/94‑1 (MQ=60)

                                TAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGT                                                              >  SRR4302540.2529824/1‑94 (MQ=60)

                                TAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGT                                                              >  SRR4302540.585156/1‑94 (MQ=60)

                                 AATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTA                                                             <  SRR4302540.9580163/94‑1 (MQ=60)

                                 AATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTA                                                             >  SRR4302540.5283909/1‑94 (MQ=60)

                                  ATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAA                                                            >  SRR4302540.6526351/1‑94 (MQ=60)

                                  ATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAA                                                            >  SRR4302540.5503032/1‑94 (MQ=60)

                                   TAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAA                                                           <  SRR4302540.9511647/94‑1 (MQ=60)

                                   TAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAA                                                           <  SRR4302540.8001798/94‑1 (MQ=60)

                                   TAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAA                                                           <  SRR4302540.8001796/94‑1 (MQ=60)

                                   TAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAA                                                           <  SRR4302540.366316/94‑1 (MQ=60)

                                   TAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAA                                                           <  SRR4302540.2026384/94‑1 (MQ=60)

                                   TAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGGGACAAGACACTTCGGCATTTATGTAAA                                                           >  SRR4302540.1739672/1‑94 (MQ=60)

                                    AAGCCTTCCATCGGCCCTTTGCTTTCATTATTTGTCATGTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAA                                                          <  SRR4302540.5282921/94‑1 (MQ=60)

                                    AAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAA                                                          >  SRR4302540.7308400/1‑94 (MQ=60)

                                      GCCTTCAAACGGCCCTTTGCTTTCATTCTTTGTCATTTGCTTATGCCTTG‑AAACAGCCGAAGGTGAAGAGCCACTTCGGCATTTATGTAACATC                                                        >  SRR4302540.7633879/1‑94 (MQ=60)

                                      GCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATC                                                        >  SRR4302540.7633877/1‑94 (MQ=60)

                                       CCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCA                                                       >  SRR4302540.1192685/1‑94 (MQ=60)

                                       CCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCA                                                       >  SRR4302540.7823511/1‑94 (MQ=60)

                                        CTTCAAACGGCCCTTTGCTTTCATTATTTGTGATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAA                                                      >  SRR4302540.5565960/1‑94 (MQ=60)

                                        CTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAA                                                      >  SRR4302540.7632900/1‑94 (MQ=60)

                                        CTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAA                                                      >  SRR4302540.8148583/1‑94 (MQ=60)

                                        CTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAA                                                      >  SRR4302540.4903163/1‑94 (MQ=60)

                                         TTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAAT                                                     <  SRR4302540.7171686/94‑1 (MQ=60)

                                         TTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTCCGGCATTTATGTAAAATCAAT                                                     <  SRR4302540.271209/94‑1 (MQ=60)

                                          TCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATA                                                    <  SRR4302540.3256696/94‑1 (MQ=60)

                                          TCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATA                                                    >  SRR4302540.5594336/1‑94 (MQ=60)

                                           CAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCGTTTATGTAAAATCAATAA                                                   >  SRR4302540.1155272/1‑94 (MQ=60)

                                           CAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAA                                                   >  SRR4302540.3176845/1‑94 (MQ=60)

                                           CAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAA                                                   <  SRR4302540.4601377/94‑1 (MQ=60)

                                           CAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCAGTTATGTAAAATCAATAA                                                   <  SRR4302540.5490201/94‑1 (MQ=60)

                                           CAAACGGCCCTTTGCTTTCATTATTTGGCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAA                                                   <  SRR4302540.5490202/94‑1 (MQ=60)

                                             AACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACA                                                 >  SRR4302540.4461355/1‑94 (MQ=60)

                                             AACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACA                                                 >  SRR4302540.7730859/1‑94 (MQ=60)

                                               CGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATG                                               >  SRR4302540.7802355/1‑94 (MQ=60)

                                               CGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATG                                               >  SRR4302540.7802354/1‑94 (MQ=60)

                                                GGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGA                                              >  SRR4302540.8791682/1‑94 (MQ=60)

                                                 GCCTTTTGTTTTCATTTTTTGTCATTGGTTTATG‑CTTAAAAAAAGCCGAAGGTAAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGAT                                             <  SRR4302540.1934754/94‑1 (MQ=60)

                                                 GCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGAT                                             <  SRR4302540.5625888/94‑1 (MQ=60)

                                                   CCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTA                                           <  SRR4302540.2141852/94‑1 (MQ=60)

                                                   CCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTA                                           >  SRR4302540.1691576/1‑94 (MQ=60)

                                                   CCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTA                                           <  SRR4302540.2757188/94‑1 (MQ=60)

                                                   CCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTA                                           >  SRR4302540.3775491/1‑94 (MQ=60)

                                                   CCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGAATTTATGTAAAATCAATAACATGATTA                                           >  SRR4302540.3933315/1‑94 (MQ=60)

                                                    CTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAA                                          >  SRR4302540.2649950/1‑94 (MQ=60)

                                                    CTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAA                                          >  SRR4302540.5702762/1‑94 (MQ=60)

                                                    CTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAA                                          >  SRR4302540.5702761/1‑94 (MQ=60)

                                                    CTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAA                                          >  SRR4302540.6652400/1‑94 (MQ=60)

                                                    CTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAA                                          >  SRR4302540.4020874/1‑94 (MQ=60)

                                                    CTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAA                                          <  SRR4302540.6782160/94‑1 (MQ=60)

                                                     TTTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAAT                                         <  SRR4302540.218358/94‑1 (MQ=60)

                                                      TTGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATT                                        <  SRR4302540.4523242/94‑1 (MQ=60)

                                                       TGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTA                                       <  SRR4302540.9034334/94‑1 (MQ=60)

                                                       TGCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTA                                       >  SRR4302540.1827119/1‑94 (MQ=60)

                                                        GCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTAT                                      >  SRR4302540.6058431/1‑94 (MQ=60)

                                                        GCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTAT                                      <  SRR4302540.9522680/94‑1 (MQ=60)

                                                        GCTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTAT                                      >  SRR4302540.7227005/1‑94 (MQ=60)

                                                         CTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATG                                     >  SRR4302540.7418307/1‑94 (MQ=60)

                                                         CTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATG                                     >  SRR4302540.1965754/1‑94 (MQ=60)

                                                         CTTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATG                                     >  SRR4302540.6597896/1‑94 (MQ=60)

                                                          TTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGA                                    <  SRR4302540.3206213/94‑1 (MQ=60)

                                                          TTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGA                                    >  SRR4302540.9666608/1‑94 (MQ=60)

                                                          TTTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGA                                    >  SRR4302540.1642541/1‑94 (MQ=60)

                                                           TTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAA                                   <  SRR4302540.2220610/94‑1 (MQ=60)

                                                           TTCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAA                                   <  SRR4302540.2325076/94‑1 (MQ=60)

                                                            TCATTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACCCTTCGGAATTTATGTAAAATCAATAACATGATTAATTATGGAA                                  >  SRR4302540.633206/1‑94 (MQ=60)

                                                               TTATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCA                               >  SRR4302540.1603480/1‑94 (MQ=60)

                                                                TATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAG                              <  SRR4302540.7872546/94‑1 (MQ=60)

                                                                TATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAG                              <  SRR4302540.4288224/94‑1 (MQ=60)

                                                                TATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAG                              <  SRR4302540.3853376/94‑1 (MQ=60)

                                                                 ATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGT                             <  SRR4302540.144883/94‑1 (MQ=60)

                                                                 ATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGT                             <  SRR4302540.4772171/94‑1 (MQ=60)

                                                                 ATTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGT                             >  SRR4302540.4749056/1‑94 (MQ=60)

                                                                  TTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTC                            <  SRR4302540.4214606/94‑1 (MQ=60)

                                                                  TTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTC                            <  SRR4302540.163933/94‑1 (MQ=60)

                                                                  TTTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTC                            >  SRR4302540.5851211/1‑94 (MQ=60)

                                                                  TTTGTCAGTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTC                            <  SRR4302540.8477128/94‑1 (MQ=60)

                                                                   TTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCG                           <  SRR4302540.9209900/94‑1 (MQ=60)

                                                                   TTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCG                           <  SRR4302540.8399396/94‑1 (MQ=60)

                                                                   TTGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCG                           >  SRR4302540.6413630/1‑94 (MQ=60)

                                                                    TGTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGA                          <  SRR4302540.3739350/94‑1 (MQ=60)

                                                                     GTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGAC                         >  SRR4302540.6015679/1‑94 (MQ=60)

                                                                     GTCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGAC                         >  SRR4302540.6223012/1‑94 (MQ=60)

                                                                      TCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACT                        >  SRR4302540.319166/1‑94 (MQ=60)

                                                                      TCATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACT                        <  SRR4302540.6569890/94‑1 (MQ=60)

                                                                       CATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTG                       >  SRR4302540.4986763/1‑94 (MQ=60)

                                                                        ATTTGCTTATGCCTTGAAAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTG                       <  SRR4302540.7777651/94‑1 (MQ=60)

                                                                        ATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAAcaattaaattgattatttttgaactcggtcgagtac                      >  SRR4302540.394819/1‑58 (MQ=60)

                                                                        ATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGA                      >  SRR4302540.5107637/1‑94 (MQ=60)

                                                                        ATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGA                      >  SRR4302540.6779514/1‑94 (MQ=60)

                                                                        ATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGA                      >  SRR4302540.6608880/1‑94 (MQ=60)

                                                                        ATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGA                      >  SRR4302540.4923193/1‑94 (MQ=60)

                                                                        ATTTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGA                      >  SRR4302540.5232397/1‑94 (MQ=60)

                                                                          TTGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACA                    >  SRR4302540.9744499/1‑94 (MQ=60)

                                                                           TGCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACAT                   <  SRR4302540.495761/94‑1 (MQ=60)

                                                                            GCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATA                  <  SRR4302540.67563/94‑1 (MQ=60)

                                                                            GCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATA                  >  SRR4302540.1550061/1‑94 (MQ=60)

                                                                            GCTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATA                  >  SRR4302540.3099490/1‑94 (MQ=60)

                                                                             CTTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAA                 >  SRR4302540.9966627/1‑94 (MQ=60)

                                                                              TTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAA                >  SRR4302540.8170618/1‑94 (MQ=60)

                                                                              TTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAA                >  SRR4302540.3451185/1‑94 (MQ=60)

                                                                              TTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAA                <  SRR4302540.8036988/94‑1 (MQ=60)

                                                                              TTATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAA                <  SRR4302540.5509354/94‑1 (MQ=60)

                                                                               TATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAAT               >  SRR4302540.3930023/1‑94 (MQ=60)

                                                                               TATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAAT               <  SRR4302540.4830105/94‑1 (MQ=60)

                                                                                ATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATC              >  SRR4302540.3459958/1‑94 (MQ=60)

                                                                                ATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATC              >  SRR4302540.3459765/1‑94 (MQ=60)

                                                                                ATGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATC              <  SRR4302540.1583479/94‑1 (MQ=60)

                                                                                 TGCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCC             >  SRR4302540.8087086/1‑94 (MQ=60)

                                                                                  GCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCA            <  SRR4302540.8506901/94‑1 (MQ=60)

                                                                                  GCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCA            >  SRR4302540.7403273/1‑94 (MQ=60)

                                                                                  GCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCA            >  SRR4302540.3865081/1‑94 (MQ=60)

                                                                                  GCCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCA            >  SRR4302540.8419752/1‑94 (MQ=60)

                                                                                   tccgtgAAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCA            <  SRR4302540.8506900/88‑1 (MQ=60)

                                                                                   CCTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCAC           >  SRR4302540.9221616/1‑94 (MQ=60)

                                                                                    CTTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACA          >  SRR4302540.2137621/1‑94 (MQ=60)

                                                                                    CTTG‑AAAAAGCCGAAGGGGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGACACCAGTCGACTGACATAAATCCACA          >  SRR4302540.2878020/1‑94 (MQ=60)

                                                                                     TTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAA         >  SRR4302540.7229509/1‑94 (MQ=60)

                                                                                     TTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAA         >  SRR4302540.6622082/1‑94 (MQ=60)

                                                                                     TTG‑AAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAA         <  SRR4302540.2566866/94‑1 (MQ=60)

                                                                                       tgAAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAG        <  SRR4302540.6297756/92‑1 (MQ=60)

                                                                                        GAAAAAGCCGATGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATACATCAACAAGG       >  SRR4302540.279362/1‑94 (MQ=60)

                                                                                        GAAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGG       >  SRR4302540.4408146/1‑94 (MQ=60)

                                                                                        GAAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGG       >  SRR4302540.279360/1‑94 (MQ=60)

                                                                                          AAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGA     <  SRR4302540.3435062/94‑1 (MQ=60)

                                                                                          AAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGA     <  SRR4302540.847633/94‑1 (MQ=60)

                                                                                          AAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGA     >  SRR4302540.7572559/1‑94 (MQ=60)

                                                                                          AAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGA     <  SRR4302540.9900217/94‑1 (MQ=60)

                                                                                          AAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGA     >  SRR4302540.122510/1‑94 (MQ=60)

                                                                                          AAAAGCCGAAGGAGAAAAGACACTTAGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGG     >  SRR4302540.69115/1‑94 (MQ=60)

                                                                                           AAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAG    >  SRR4302540.7329800/1‑94 (MQ=60)

                                                                                           AAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAG    <  SRR4302540.7611345/94‑1 (MQ=60)

                                                                                            AAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGC   <  SRR4302540.7931973/94‑1 (MQ=60)

                                                                                             AGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCC  <  SRR4302540.4190847/94‑1 (MQ=60)

GGTCCATTAAGGACATGTGTCATATCGATAACTAATAAGCCTTCAAACGGCCCTTTGCTTTCATTATTTGTCATTTGCTTATGCCTTGAAAAAAGCCGAAGGTGAAAAGACACTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCC  >  NC_000913/2487115‑2487301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`