Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,561,503 A→G intergenic (+366/‑94) b2447 → / → b2448 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,561,5030AG99.8% 1387.0 / NA 425intergenic (+366/‑94)b2447/b2448hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (232/192);  total (232/193)
Fisher's exact test for biased strand distribution p-value = 4.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 435 total aligned reads displayed.

CACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTG  >  NC_000913/2561413‑2561592
                                                                                          |                                                                                         
   caAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTcc                                                                                      <  2:4583821/93‑1 (MQ=255)
    aaaGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTccc                                                                                     >  2:9314515/1‑93 (MQ=255)
     aaGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCca                                                                                    >  1:3238643/1‑93 (MQ=255)
          aacaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaac                                                                               <  2:1835216/93‑1 (MQ=255)
          aacaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaac                                                                               <  2:6121485/93‑1 (MQ=255)
           acacGATGGGAGGTGAATTTTGTGATGCAGATCCCTTTTTCCCTTCAGGCATTTTTGTTTAATAAAATCAACGAAAGGCGGTTCCcaacaaca                                                                              <  2:2926161/93‑1 (MQ=255)
           acaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaaca                                                                              >  2:9188193/1‑93 (MQ=255)
           acaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaaca                                                                              >  1:2690478/1‑93 (MQ=255)
            caaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaacaa                                                                             >  1:10010658/1‑93 (MQ=255)
            caaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaacaa                                                                             >  2:6432239/1‑93 (MQ=255)
             aaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACaaa                                                                            <  2:7414056/93‑1 (MQ=255)
              aGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACaaaa                                                                           <  1:8114798/93‑1 (MQ=255)
              aGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACaaaa                                                                           <  1:8539151/93‑1 (MQ=255)
                aTGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATa                                                                         >  1:7588772/1‑93 (MQ=255)
                 tGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATaa                                                                        >  1:1164119/1‑93 (MQ=255)
                  gggAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATaaa                                                                       <  2:6696389/93‑1 (MQ=255)
                  gggAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATaaa                                                                       >  2:8236587/1‑93 (MQ=255)
                  gggAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATaaa                                                                       >  2:9695179/1‑93 (MQ=255)
                    gagaTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGa                                                                     <  2:417561/93‑1 (MQ=255)
                    gAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAGCGAAAGGCGGTTCCCAACAACAAAATAAAGa                                                                     >  1:2352819/1‑93 (MQ=255)
                    gAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGa                                                                     <  1:818022/93‑1 (MQ=255)
                    gAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGa                                                                     <  1:5835569/93‑1 (MQ=255)
                    gAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGa                                                                     >  1:5332555/1‑93 (MQ=255)
                      ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATg                                                                   <  2:7125991/93‑1 (MQ=255)
                      ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATg                                                                   <  2:8086485/93‑1 (MQ=255)
                      ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATg                                                                   >  1:9418738/1‑93 (MQ=255)
                      ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATg                                                                   <  1:9051517/93‑1 (MQ=255)
                      ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATg                                                                   >  1:2567345/1‑93 (MQ=255)
                      ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATg                                                                   <  1:4353368/93‑1 (MQ=255)
                          aaTTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAg                                                               >  1:8669472/1‑93 (MQ=255)
                           aTTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAgg                                                              >  2:6631578/1‑93 (MQ=255)
                              ttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTaa                                                           >  1:646901/1‑93 (MQ=255)
                               tgtgATGCAGATCGCTTTTTCGCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTaaa                                                          >  2:9888658/1‑93 (MQ=255)
                                 tgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTaaaaa                                                        <  2:4915507/93‑1 (MQ=255)
                                  gATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAAt                                                       <  2:768331/93‑1 (MQ=255)
                                  gATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAAt                                                       <  1:5149544/93‑1 (MQ=255)
                                    tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGa                                                     <  2:1701803/93‑1 (MQ=255)
                                    tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGa                                                     >  2:9015916/1‑93 (MQ=255)
                                    tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGa                                                     >  1:4490261/1‑93 (MQ=255)
                                      cAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGaaa                                                   <  2:1467649/93‑1 (MQ=255)
                                       aGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAc                                                  >  1:5229774/1‑93 (MQ=255)
                                        gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACg                                                 <  1:6347389/93‑1 (MQ=255)
                                         aTCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACgg                                                >  1:8817164/1‑93 (MQ=255)
                                          tCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGt                                               >  1:6206261/1‑93 (MQ=255)
                                           cGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTg                                              <  1:4100836/93‑1 (MQ=255)
                                             cTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTggg                                            >  1:1715408/1‑93 (MQ=255)
                                              tttttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGa                                           >  2:3358247/1‑93 (MQ=255)
                                              tttttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGa                                           <  1:673440/93‑1 (MQ=255)
                                               ttttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGaa                                          <  1:4873194/93‑1 (MQ=255)
                                               ttttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGaa                                          >  1:9162409/1‑93 (MQ=255)
                                                tttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAg                                         >  2:1137495/1‑93 (MQ=255)
                                                tttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAg                                         >  1:5514850/1‑93 (MQ=255)
                                                 ttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAgg                                        >  2:3575777/1‑92 (MQ=255)
                                                  tCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTg                                       <  2:1502815/93‑1 (MQ=255)
                                                   cccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTgg                                      >  1:3612019/1‑93 (MQ=255)
                                                   cccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTgg                                      >  1:6113627/1‑93 (MQ=255)
                                                   cccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTgg                                      >  1:5992095/1‑93 (MQ=255)
                                                    ccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGc                                     <  2:8683741/93‑1 (MQ=255)
                                                      ttCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCtt                                   >  1:3359629/1‑93 (MQ=255)
                                                      ttCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCtt                                   >  1:2039051/1‑93 (MQ=255)
                                                      ttCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCtt                                   <  2:3632508/93‑1 (MQ=255)
                                                       tCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACTGAGGGAAGTGGCttt                                  >  1:7148291/1‑93 (MQ=255)
                                                       tCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCttt                                  >  1:2909504/1‑93 (MQ=255)
                                                        cAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTa                                 <  2:5316564/93‑1 (MQ=255)
                                                         aGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTAc                                >  2:6301024/1‑93 (MQ=255)
                                                          ggCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACt                               >  1:896007/1‑93 (MQ=255)
                                                          ggCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACt                               >  1:7953765/1‑93 (MQ=255)
                                                           gCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTg                              <  2:944246/93‑1 (MQ=255)
                                                            cATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTgg                             <  2:7806686/93‑1 (MQ=255)
                                                             aTTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGt                            >  1:2554143/1‑93 (MQ=255)
                                                               ttttGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGa                          <  2:3089576/93‑1 (MQ=255)
                                                                tttGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGCGGATTTACTGGGGag                         >  1:8731828/1‑92 (MQ=255)
                                                                  tGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATgg                       >  2:7182380/1‑93 (MQ=255)
                                                                   gTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGt                      >  2:6944942/1‑93 (MQ=255)
                                                                    tttAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTa                     >  1:6778526/1‑93 (MQ=255)
                                                                     ttAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTaa                    <  1:7074079/93‑1 (MQ=255)
                                                                       aaTTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATg                  >  2:2371440/1‑93 (MQ=255)
                                                                       aaTTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATg                  >  1:7496500/1‑93 (MQ=255)
                                                                        aTTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGt                 <  1:56707/93‑1 (MQ=255)
                                                                        aTTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGt                 <  2:5933535/93‑1 (MQ=255)
                                                                         ttCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt                <  1:3876005/93‑1 (MQ=255)
                                                                         ttCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt                <  1:311722/93‑1 (MQ=255)
                                                                          tcaatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTg               >  1:7563905/1‑93 (MQ=255)
                                                                           caatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg              <  1:4006086/93‑1 (MQ=255)
                                                                            aatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGt             >  1:3453755/1‑93 (MQ=255)
                                                                            aatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGt             <  1:9613868/93‑1 (MQ=255)
                                                                            aatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGt             >  2:3919658/1‑93 (MQ=255)
                                                                            aatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGt             <  1:3922759/93‑1 (MQ=255)
                                                                             atcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt            <  1:2788218/93‑1 (MQ=255)
                                                                               caaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTg          >  2:5013535/1‑93 (MQ=255)
                                                                               caaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTg          >  1:9893232/1‑93 (MQ=255)
                                                                                aaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGc         >  2:4750251/1‑93 (MQ=255)
                                                                                 aCGAAATGCGGTTCCCAACAACAAAGTAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt        <  2:9617671/93‑1 (MQ=255)
                                                                                 aCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt        <  2:5126599/93‑1 (MQ=255)
                                                                                   gAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt      >  2:2749331/1‑93 (MQ=255)
                                                                                    aaaGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTa     <  2:2209541/93‑1 (MQ=255)
                                                                                    aaaGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTa     <  1:2183921/93‑1 (MQ=255)
                                                                                    aaaGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTa     >  2:4338385/1‑93 (MQ=255)
                                                                                      aGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt   <  2:7606499/93‑1 (MQ=255)
                                                                                       ggCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTg  <  1:4146257/93‑1 (MQ=255)
                                                                                          |                                                                                         
CACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTG  >  NC_000913/2561413‑2561592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 259 total aligned reads displayed.
TCCCACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT  >  NC_000913/2561410‑2561596
                                                                                             |                                                                                             
 CCCACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGG                                                                                              <  SRR4302540.1748846/94‑1 (MQ=60)
 CCCACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGG                                                                                              >  SRR4302540.5660669/1‑94 (MQ=60)
  CCACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGT                                                                                             >  SRR4302540.3167514/1‑94 (MQ=60)
   CACCAAAGCCAACAAGATGGGAGGTGACTTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTT                                                                                            >  SRR4302540.5291568/1‑94 (MQ=60)
       AAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCA                                                                                        >  SRR4302540.2757514/1‑94 (MQ=60)
       AAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCA                                                                                        >  SRR4302540.3273874/1‑94 (MQ=60)
          GCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACA                                                                                     <  SRR4302540.883777/94‑1 (MQ=60)
           CCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAA                                                                                    >  SRR4302540.7393307/1‑94 (MQ=60)
           CCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAA                                                                                    <  SRR4302540.8395121/94‑1 (MQ=60)
            CAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAAC                                                                                   <  SRR4302540.5631149/94‑1 (MQ=60)
             AACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACA                                                                                  >  SRR4302540.2719545/1‑94 (MQ=60)
             AACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACA                                                                                  <  SRR4302540.2465035/94‑1 (MQ=60)
              ACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAA                                                                                 >  SRR4302540.10127223/1‑94 (MQ=60)
               CAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAA                                                                                <  SRR4302540.4059581/94‑1 (MQ=60)
                AAGATGGGAGGTGAATTTTGTGATGCAGATCTCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAA                                                                               <  SRR4302540.3439497/94‑1 (MQ=60)
                AAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAA                                                                               <  SRR4302540.5762393/94‑1 (MQ=60)
                 AGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAAT                                                                              <  SRR4302540.8638377/94‑1 (MQ=60)
                 AGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAAT                                                                              >  SRR4302540.2760165/1‑94 (MQ=60)
                 AGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAAT                                                                              >  SRR4302540.2760164/1‑94 (MQ=60)
                 AGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAAT                                                                              <  SRR4302540.8208981/94‑1 (MQ=60)
                 AGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAAT                                                                              <  SRR4302540.8208980/94‑1 (MQ=60)
                  GATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATA                                                                             >  SRR4302540.7674004/1‑94 (MQ=60)
                   ATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAA                                                                            <  SRR4302540.1592510/94‑1 (MQ=60)
                   ATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAA                                                                            >  SRR4302540.1176200/1‑94 (MQ=60)
                      GGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAGCGAAAGGCGGTTCCCAACAACAAAATAAAGA                                                                         >  SRR4302540.2378158/1‑94 (MQ=60)
                      GGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGA                                                                         >  SRR4302540.5390988/1‑94 (MQ=60)
                       GAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGAT                                                                        >  SRR4302540.4270492/1‑94 (MQ=60)
                       GAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGAT                                                                        <  SRR4302540.3130567/94‑1 (MQ=60)
                       GAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGAT                                                                        <  SRR4302540.826714/94‑1 (MQ=60)
                       GAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGAT                                                                        <  SRR4302540.5900092/94‑1 (MQ=60)
                       GAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCGTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGAT                                                                        <  SRR4302540.8801036/94‑1 (MQ=60)
                        AGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATG                                                                       >  SRR4302540.2595026/1‑94 (MQ=60)
                        AGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATG                                                                       >  SRR4302540.9295310/1‑94 (MQ=60)
                        AGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTGCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATG                                                                       <  SRR4302540.9730720/94‑1 (MQ=60)
                         GGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGG                                                                      <  SRR4302540.9160176/94‑1 (MQ=60)
                         GGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGG                                                                      <  SRR4302540.4400720/94‑1 (MQ=60)
                          GTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGG                                                                     <  SRR4302540.743241/94‑1 (MQ=60)
                          GTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGG                                                                     <  SRR4302540.7130283/94‑1 (MQ=60)
                            GAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAG                                                                   >  SRR4302540.8770175/1‑94 (MQ=60)
                            GAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAG                                                                   >  SRR4302540.2323932/1‑94 (MQ=60)
                              ATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGT                                                                 >  SRR4302540.953985/1‑94 (MQ=60)
                                TTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAA                                                               >  SRR4302540.653789/1‑94 (MQ=60)
                                  TGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA                                                             >  SRR4302540.61392/1‑94 (MQ=60)
                                    TGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAAT                                                           <  SRR4302540.8099777/94‑1 (MQ=60)
                                     GATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATG                                                          >  SRR4302540.5364274/1‑94 (MQ=60)
                                     GATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATG                                                          <  SRR4302540.7659813/94‑1 (MQ=60)
                                     GATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATG                                                          <  SRR4302540.5205373/94‑1 (MQ=60)
                                     GATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATG                                                          >  SRR4302540.1115509/1‑94 (MQ=60)
                                      ATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGA                                                         <  SRR4302540.8885440/94‑1 (MQ=60)
                                      ATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGA                                                         >  SRR4302540.4538953/1‑94 (MQ=60)
                                       TGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAA                                                        <  SRR4302540.7703043/94‑1 (MQ=60)
                                         CAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAC                                                      >  SRR4302540.5286807/1‑94 (MQ=60)
                                         CAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAC                                                      >  SRR4302540.5244385/1‑94 (MQ=60)
                                         CAGATCGCTTTTTCCCTGCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAC                                                      <  SRR4302540.4041018/94‑1 (MQ=60)
                                          AGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACG                                                     <  SRR4302540.5868280/94‑1 (MQ=60)
                                          AGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACG                                                     >  SRR4302540.7210868/1‑94 (MQ=60)
                                          AGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGGAAAAATGAAACG                                                     >  SRR4302540.7764758/1‑94 (MQ=60)
                                           GATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACTG                                                    >  SRR4302540.8263402/1‑94 (MQ=60)
                                           GATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGG                                                    <  SRR4302540.3508586/94‑1 (MQ=60)
                                           GATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGG                                                    >  SRR4302540.8919107/1‑94 (MQ=60)
                                           GATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGG                                                    <  SRR4302540.6418067/94‑1 (MQ=60)
                                           GATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGG                                                    >  SRR4302540.1143390/1‑94 (MQ=60)
                                           GATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGG                                                    >  SRR4302540.4012177/1‑94 (MQ=60)
                                           GATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGAAAAAATGAAACGG                                                    >  SRR4302540.834903/1‑94 (MQ=60)
                                            ATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGT                                                   >  SRR4302540.6275342/1‑94 (MQ=60)
                                            ATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGT                                                   <  SRR4302540.3503840/94‑1 (MQ=60)
                                            ATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGT                                                   <  SRR4302540.3323257/94‑1 (MQ=60)
                                            ATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGT                                                   <  SRR4302540.811988/94‑1 (MQ=60)
                                            ATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGGTCCCAATAACAAAATAAAGATTGGTGGTAAATATGAAACTGT                                                   >  SRR4302540.9069483/1‑94 (MQ=60)
                                             TCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTG                                                  <  SRR4302540.604094/94‑1 (MQ=60)
                                             TCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTG                                                  <  SRR4302540.897461/94‑1 (MQ=60)
                                              CGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGG                                                 <  SRR4302540.6207011/94‑1 (MQ=60)
                                              CGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGG                                                 >  SRR4302540.2588162/1‑94 (MQ=60)
                                              CGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGG                                                 >  SRR4302540.2588163/1‑94 (MQ=60)
                                              CGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGG                                                 >  SRR4302540.9505033/1‑94 (MQ=60)
                                              CGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGG                                                 <  SRR4302540.4145078/94‑1 (MQ=60)
                                               GCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGG                                                >  SRR4302540.10011212/1‑94 (MQ=60)
                                               GCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGG                                                <  SRR4302540.3564807/94‑1 (MQ=60)
                                               GCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGG                                                >  SRR4302540.1733935/1‑94 (MQ=60)
                                                CTTTTTCCCTTCAGGTATTTTTGTTTAATTCAATCAACGAAAGGCGGATCCCAACAACTTAATAAAGATGGGTTGTAAATATGAAACGGTGGGA                                               >  SRR4302540.9076408/1‑94 (MQ=60)
                                                CTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGA                                               <  SRR4302540.417136/94‑1 (MQ=60)
                                                CTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGA                                               >  SRR4302540.2508604/1‑94 (MQ=60)
                                                 TTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAA                                              <  SRR4302540.680649/94‑1 (MQ=60)
                                                  TTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAG                                             >  SRR4302540.5575594/1‑94 (MQ=60)
                                                  TTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAG                                             >  SRR4302540.9056912/1‑94 (MQ=60)
                                                  TTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAG                                             <  SRR4302540.5430656/94‑1 (MQ=60)
                                                  TTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAG                                             <  SRR4302540.4925481/94‑1 (MQ=60)
                                                  TTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAG                                             <  SRR4302540.3456082/94‑1 (MQ=60)
                                                  TTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAG                                             >  SRR4302540.1943068/1‑94 (MQ=60)
                                                  TTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAG                                             <  SRR4302540.2013221/94‑1 (MQ=60)
                                                   TTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGT                                            <  SRR4302540.6483975/94‑1 (MQ=60)
                                                     TCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGG                                          >  SRR4302540.6181710/1‑94 (MQ=60)
                                                     TCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGG                                          >  SRR4302540.3651506/1‑94 (MQ=60)
                                                     TCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGG                                          >  SRR4302540.6058481/1‑94 (MQ=60)
                                                       CCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCT                                        <  SRR4302540.3086746/94‑1 (MQ=60)
                                                        CTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTT                                       >  SRR4302540.2061028/1‑94 (MQ=60)
                                                        CTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTT                                       >  SRR4302540.3254400/1‑94 (MQ=60)
                                                        CTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTT                                       >  SRR4302540.3396417/1‑94 (MQ=60)
                                                         TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACTGAGGGAAGTGGCTTT                                      >  SRR4302540.7227947/1‑94 (MQ=60)
                                                         TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGCAGTGGCTTT                                      >  SRR4302540.2941294/1‑94 (MQ=60)
                                                         TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT                                      >  SRR4302540.401027/1‑94 (MQ=60)
                                                         TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT                                      <  SRR4302540.6292213/94‑1 (MQ=60)
                                                         TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT                                      >  SRR4302540.3689211/1‑94 (MQ=60)
                                                         TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT                                      <  SRR4302540.6724875/94‑1 (MQ=60)
                                                         TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT                                      >  SRR4302540.9445868/1‑94 (MQ=60)
                                                         TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT                                      >  SRR4302540.5688226/1‑94 (MQ=60)
                                                         TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT                                      >  SRR4302540.2941295/1‑94 (MQ=60)
                                                         TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT                                      <  SRR4302540.1742550/94‑1 (MQ=60)
                                                          TCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTA                                     >  SRR4302540.8921342/1‑94 (MQ=60)
                                                           CAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAcaaccaaataaaaaagggaagttaaaatgaaaacgggggaaaggggtttaac                                    >  SRR4302540.6216135/1‑42 (MQ=60)
                                                           CAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTAC                                    <  SRR4302540.3302264/94‑1 (MQ=60)
                                                           CAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTAC                                    <  SRR4302540.8650979/94‑1 (MQ=60)
                                                           CAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTAC                                    >  SRR4302540.8677660/1‑94 (MQ=60)
                                                           CAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTAC                                    >  SRR4302540.2471135/1‑94 (MQ=60)
                                                           CAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTAC                                    >  SRR4302540.6216136/1‑94 (MQ=60)
                                                           CAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTAC                                    <  SRR4302540.4902749/94‑1 (MQ=60)
                                                            AGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACT                                   >  SRR4302540.5159916/1‑94 (MQ=60)
                                                            AGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACT                                   >  SRR4302540.905525/1‑94 (MQ=60)
                                                            AGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACT                                   <  SRR4302540.5444633/94‑1 (MQ=60)
                                                            AGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACT                                   >  SRR4302540.8046477/1‑94 (MQ=60)
                                                            AGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACT                                   <  SRR4302540.6365823/94‑1 (MQ=60)
                                                            AGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACT                                   <  SRR4302540.8644504/94‑1 (MQ=60)
                                                             GGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTG                                  >  SRR4302540.6449635/1‑94 (MQ=60)
                                                             GGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTG                                  >  SRR4302540.4631540/1‑94 (MQ=60)
                                                             GGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTG                                  >  SRR4302540.1641970/1‑94 (MQ=60)
                                                              GCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGG                                 <  SRR4302540.8194000/94‑1 (MQ=60)
                                                              GCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGG                                 <  SRR4302540.3233198/94‑1 (MQ=60)
                                                              GCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGG                                 <  SRR4302540.3921572/94‑1 (MQ=60)
                                                              GCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGG                                 <  SRR4302540.9302308/94‑1 (MQ=60)
                                                              GCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGG                                 >  SRR4302540.4914378/1‑94 (MQ=60)
                                                               CATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGT                                >  SRR4302540.9174624/1‑94 (MQ=60)
                                                               CATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGT                                >  SRR4302540.2581662/1‑94 (MQ=60)
                                                               CATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGT                                >  SRR4302540.3699297/1‑94 (MQ=60)
                                                               CATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGT                                >  SRR4302540.9174625/1‑94 (MQ=60)
                                                                ATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTG                               >  SRR4302540.393322/1‑94 (MQ=60)
                                                                ATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTG                               >  SRR4302540.598546/1‑94 (MQ=60)
                                                                ATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTG                               >  SRR4302540.9566297/1‑94 (MQ=60)
                                                                  TTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGAT                             >  SRR4302540.8833230/1‑94 (MQ=60)
                                                                  TTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGCGGATTTACTGGggag                             >  SRR4302540.8833232/1‑90 (MQ=60)
                                                                   TTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATG                            >  SRR4302540.4168520/1‑94 (MQ=60)
                                                                    TTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGG                           <  SRR4302540.6840778/94‑1 (MQ=60)
                                                                      GTTTAATTCAATCAACGAAAGGCGGTTCCCCACAACAAAATAAAGATGGGAGGTAACAATGAACCGGTGGGAcgggcttttactggagatgtta                         >  SRR4302540.4506492/1‑72 (MQ=60)
                                                                      GTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTA                         >  SRR4302540.6853454/1‑94 (MQ=60)
                                                                      GTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTA                         <  SRR4302540.7059427/94‑1 (MQ=60)
                                                                      GTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTA                         >  SRR4302540.4506493/1‑94 (MQ=60)
                                                                      GTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTA                         >  SRR4302540.2119174/1‑94 (MQ=60)
                                                                      GTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGCAAAAATGACACGGTGGGAAGTGGCTTTACTGGTGATGGGA                         >  SRR4302540.5380210/1‑94 (MQ=60)
                                                                        TTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAAT                       <  SRR4302540.7152789/94‑1 (MQ=60)
                                                                         TAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATG                      >  SRR4302540.521030/1‑94 (MQ=60)
                                                                         TAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATG                      >  SRR4302540.7580241/1‑94 (MQ=60)
                                                                         TAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATG                      >  SRR4302540.7580242/1‑94 (MQ=60)
                                                                         TAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATG                      <  SRR4302540.288966/94‑1 (MQ=60)
                                                                         TAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATG                      >  SRR4302540.3081877/1‑94 (MQ=60)
                                                                          AATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGT                     >  SRR4302540.6696927/1‑94 (MQ=60)
                                                                          AATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGT                     >  SRR4302540.4053023/1‑94 (MQ=60)
                                                                           ATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTT                    <  SRR4302540.57275/94‑1 (MQ=60)
                                                                            TTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTG                   <  SRR4302540.314818/94‑1 (MQ=60)
                                                                            TTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTG                   >  SRR4302540.4366371/1‑94 (MQ=60)
                                                                            TTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTG                   >  SRR4302540.7648742/1‑94 (MQ=60)
                                                                            TTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTG                   <  SRR4302540.3918134/94‑1 (MQ=60)
                                                                            TTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGCGGGAAGTGGATTTACTGGGGAGGGCAATGTTG                   >  SRR4302540.7648743/1‑94 (MQ=60)
                                                                             TCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGCGGGAAGTGGCTTTACTGGTGATGGTAATGTTGG                  >  SRR4302540.10078816/1‑94 (MQ=60)
                                                                              CAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGT                 >  SRR4302540.3491335/1‑94 (MQ=60)
                                                                              CAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGT                 <  SRR4302540.4049218/94‑1 (MQ=60)
                                                                              CAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGT                 <  SRR4302540.2352527/94‑1 (MQ=60)
                                                                              CAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGT                 <  SRR4302540.2153880/94‑1 (MQ=60)
                                                                               AATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTT                >  SRR4302540.6601889/1‑94 (MQ=60)
                                                                               AATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTT                <  SRR4302540.9727217/94‑1 (MQ=60)
                                                                               AATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTT                <  SRR4302540.3965213/94‑1 (MQ=60)
                                                                                ATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTT               <  SRR4302540.2184208/94‑1 (MQ=60)
                                                                                ATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTT               >  SRR4302540.9037088/1‑94 (MQ=60)
                                                                                ATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTT               >  SRR4302540.2682146/1‑94 (MQ=60)
                                                                                ATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTT               <  SRR4302540.2818329/94‑1 (MQ=60)
                                                                                ATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTT               <  SRR4302540.8034760/94‑1 (MQ=60)
                                                                                ATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTT               <  SRR4302540.7189704/94‑1 (MQ=60)
                                                                                ATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTT               <  SRR4302540.7189702/94‑1 (MQ=60)
                                                                                ATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGGGGGAAGTGGGTTTACTGGTGATGGTAGTGTTGGTTG               >  SRR4302540.7580906/1‑94 (MQ=60)
                                                                                 TCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTG              >  SRR4302540.10008757/1‑94 (MQ=60)
                                                                                  CAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGC             >  SRR4302540.973324/1‑94 (MQ=60)
                                                                                  CAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGGGGGAAGGGGCTTTACTGGTGATGGTAATGTTGGTTTGC             >  SRR4302540.7077910/1‑94 (MQ=60)
                                                                                   AACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCT            <  SRR4302540.7581871/94‑1 (MQ=60)
                                                                                     CGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGT          >  SRR4302540.6125687/1‑94 (MQ=60)
                                                                                     CGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGT          >  SRR4302540.5840243/1‑94 (MQ=60)
                                                                                      GAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTA         >  SRR4302540.6838787/1‑94 (MQ=60)
                                                                                      GAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGGGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTtctggt         >  SRR4302540.1438406/1‑88 (MQ=60)
                                                                                       AAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAT        <  SRR4302540.2207494/94‑1 (MQ=60)
                                                                                        AAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATT       <  SRR4302540.4153812/94‑1 (MQ=60)
                                                                                        AAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGAAATGTTGGTTTGCTGTATT       >  SRR4302540.5015469/1‑94 (MQ=60)
                                                                                         AGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTG      <  SRR4302540.2652861/94‑1 (MQ=60)
                                                                                          GGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGA     <  SRR4302540.4191130/94‑1 (MQ=60)
                                                                                           GCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAA    <  SRR4302540.1278058/94‑1 (MQ=60)
                                                                                            CGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAC   <  SRR4302540.3449907/94‑1 (MQ=60)
                                                                                            CGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAC   >  SRR4302540.4124480/1‑94 (MQ=60)
                                                                                            CGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAC   <  SRR4302540.5037259/94‑1 (MQ=60)
                                                                                            CGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAC   >  SRR4302540.4368/1‑94 (MQ=60)
                                                                                             GGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT  <  SRR4302540.9267819/94‑1 (MQ=60)
                                                                                             GGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT  >  SRR4302540.9627417/1‑94 (MQ=60)
                                                                                             GGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT  <  SRR4302540.5755228/94‑1 (MQ=60)
                                                                                             GGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT  >  SRR4302540.6668533/1‑94 (MQ=60)
                                                                                             GGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT  <  SRR4302540.8931418/94‑1 (MQ=60)
                                                                                             |                                                                                             
TCCCACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT  >  NC_000913/2561410‑2561596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑