Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,561,503 |
A→G |
intergenic (+366/‑94) |
b2447 → / → b2448 |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,561,503 | 0 | A | G | 100.0%
| 682.7
/ NA
| 211 | intergenic (+366/‑94) | b2447/b2448 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/97); total (114/97) |
Only 100 of 212 total aligned reads displayed.
CACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTG > NC_000913/2561413‑2561592
|
caccaAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGt > 2:4166931/1‑93 (MQ=255)
accaAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGtt > 2:617795/1‑93 (MQ=255)
caAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTcc < 1:4075316/93‑1 (MQ=255)
caAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTcc > 1:373528/1‑93 (MQ=255)
caAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTcc > 2:3226210/1‑93 (MQ=255)
aaGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCca > 2:317827/1‑93 (MQ=255)
aGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaa < 1:2573311/93‑1 (MQ=255)
gCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaac > 2:89469/1‑93 (MQ=255)
gCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaac < 2:4386109/93‑1 (MQ=255)
ccAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaaca > 2:5962811/1‑93 (MQ=255)
caacaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaa > 2:7108/1‑93 (MQ=255)
aacaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaac > 2:2758642/1‑93 (MQ=255)
aacaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaac > 1:228270/1‑93 (MQ=255)
aacaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaac > 2:2235076/1‑93 (MQ=255)
acaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaaca < 2:3321605/93‑1 (MQ=255)
acaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaaca < 1:2885307/93‑1 (MQ=255)
acaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaaca > 2:3031087/1‑93 (MQ=255)
caaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaacaa < 2:3908653/93‑1 (MQ=255)
caaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaacaa < 1:3948135/93‑1 (MQ=255)
aGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACaaaa > 2:3636985/1‑93 (MQ=255)
gATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAAt > 1:6108476/1‑93 (MQ=255)
tGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATaa > 1:5880464/1‑93 (MQ=255)
gggAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATaaa < 2:3769969/93‑1 (MQ=255)
gggAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATaaa < 2:1899278/93‑1 (MQ=255)
ggAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAg > 2:3716609/1‑93 (MQ=255)
ggAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAg < 1:3914075/93‑1 (MQ=255)
gAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGa < 2:3089470/93‑1 (MQ=255)
gAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGa < 2:2688348/93‑1 (MQ=255)
gAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGa < 2:5217292/93‑1 (MQ=255)
aGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGAt < 2:178429/93‑1 (MQ=255)
aGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGAt > 1:5573660/1‑93 (MQ=255)
ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATg > 1:2869198/1‑93 (MQ=255)
tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATggg < 1:3069936/93‑1 (MQ=255)
gAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGa < 1:4632843/93‑1 (MQ=255)
aTTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAgg > 2:5505640/1‑93 (MQ=255)
tttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTa > 2:2705033/1‑93 (MQ=255)
tttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTa > 1:1028680/1‑93 (MQ=255)
ttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTaa > 1:3146117/1‑93 (MQ=255)
tgtgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTaaa < 1:91500/93‑1 (MQ=255)
tgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTaaaaa > 1:1545882/1‑93 (MQ=255)
aTGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATg < 2:200853/93‑1 (MQ=255)
aTGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATg > 2:6293384/1‑93 (MQ=255)
gCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGAAAAAATGaa > 1:5282684/1‑93 (MQ=255)
cAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGaaa < 1:192699/93‑1 (MQ=255)
aGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAc < 1:1015595/93‑1 (MQ=255)
gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACg < 1:949546/93‑1 (MQ=255)
gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACg > 1:5392492/1‑93 (MQ=255)
aTCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACgg < 2:6035980/93‑1 (MQ=255)
aTCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACgg < 2:5064437/93‑1 (MQ=255)
aTCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACgg < 2:831167/93‑1 (MQ=255)
tCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACggg > 1:3403090/1‑92 (MQ=255)
cGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTg < 2:2458476/93‑1 (MQ=255)
cGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTg > 1:5833065/1‑93 (MQ=255)
gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTgg > 2:450758/1‑93 (MQ=255)
gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTgg < 1:718282/93‑1 (MQ=255)
gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTgg > 1:389158/1‑93 (MQ=255)
gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTgg > 2:2304491/1‑93 (MQ=255)
tttttCCCTTCAGGCATTTTTGTTTAATTCAATCAGCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGa > 1:1982790/1‑93 (MQ=255)
tttttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGa < 1:4130957/93‑1 (MQ=255)
tCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTg > 2:1014187/1‑93 (MQ=255)
tCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTg > 2:6248988/1‑93 (MQ=255)
ccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGc > 2:1399118/1‑93 (MQ=255)
ccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGc < 2:855605/93‑1 (MQ=255)
cTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCt > 1:2642367/1‑93 (MQ=255)
cTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCt > 2:570393/1‑93 (MQ=255)
tCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCttt > 1:5750597/1‑93 (MQ=255)
ggCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACt > 2:3974356/1‑93 (MQ=255)
gCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTg < 1:693885/93‑1 (MQ=255)
gCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTg > 2:5607650/1‑93 (MQ=255)
gCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTg < 1:5530577/93‑1 (MQ=255)
aTTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGt < 1:3090431/93‑1 (MQ=255)
tttttGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTg > 2:2219445/1‑93 (MQ=255)
ttttGTTTAATTCAATCAACGAAAGGCGGTTCCGCACAACAAAATAAAGATGGGAGGTACAAATGAAACGGTGGGAAGTGGCTTTACTGGTGa > 2:969823/1‑93 (MQ=255)
ttttGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGa < 1:6234039/93‑1 (MQ=255)
tttGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGAt > 2:4830475/1‑93 (MQ=255)
tGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATgg > 1:6187182/1‑93 (MQ=255)
gTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGt < 1:745692/93‑1 (MQ=255)
ttAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTaa < 2:593344/93‑1 (MQ=255)
ttCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt > 1:202432/1‑93 (MQ=255)
ttCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt < 1:3460997/93‑1 (MQ=255)
tcaatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTg < 1:4662619/93‑1 (MQ=255)
caatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg < 2:5327042/93‑1 (MQ=255)
caatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg > 2:5405672/1‑93 (MQ=255)
aatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGt < 1:452350/93‑1 (MQ=255)
aatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGt < 1:979237/93‑1 (MQ=255)
atcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt > 1:1229736/1‑93 (MQ=255)
atcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt < 1:6027636/93‑1 (MQ=255)
atcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt < 2:4938373/93‑1 (MQ=255)
tcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGttt > 2:213116/1‑93 (MQ=255)
caaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTg > 1:162889/1‑93 (MQ=255)
aaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGc < 2:4550020/93‑1 (MQ=255)
aaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGc > 2:3572022/1‑93 (MQ=255)
aaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGGAATGTTGGTTTGc > 1:2426755/1‑93 (MQ=255)
cGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg > 2:1218173/1‑93 (MQ=255)
gAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt > 1:5839652/1‑93 (MQ=255)
aaaGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTa > 2:4649605/1‑93 (MQ=255)
aaaGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTa > 2:1359343/1‑93 (MQ=255)
aGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt > 1:5602383/1‑93 (MQ=255)
aGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt < 1:4860205/93‑1 (MQ=255)
ggCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTg < 2:2610524/93‑1 (MQ=255)
|
CACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTG > NC_000913/2561413‑2561592
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCCACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT > NC_000913/2561410‑2561596
|
TCCCACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCG > SRR4302533.3297643/1‑94 (MQ=60)
CCCACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGG < SRR4302533.2871526/94‑1 (MQ=60)
CCACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGT > SRR4302533.2386954/1‑94 (MQ=60)
CCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCC > SRR4302533.375784/1‑94 (MQ=60)
CAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCC < SRR4302533.4100125/94‑1 (MQ=60)
AAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCA < SRR4302533.344118/94‑1 (MQ=60)
AGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAAC < SRR4302533.2589141/94‑1 (MQ=60)
GCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACA > SRR4302533.2732046/1‑94 (MQ=60)
GCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACA < SRR4302533.3269312/94‑1 (MQ=60)
CAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAAC > SRR4302533.229687/1‑94 (MQ=60)
CAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAAC > SRR4302533.5885924/1‑94 (MQ=60)
AACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACA < SRR4302533.3200004/94‑1 (MQ=60)
ACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAA < SRR4302533.554047/94‑1 (MQ=60)
ACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAA < SRR4302533.2903048/94‑1 (MQ=60)
CAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAA < SRR4302533.3972211/94‑1 (MQ=60)
CAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAA < SRR4302533.706954/94‑1 (MQ=60)
AAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAA < SRR4302533.3799524/94‑1 (MQ=60)
AGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAAT > SRR4302533.6145355/1‑94 (MQ=60)
ATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAA > SRR4302533.5916000/1‑94 (MQ=60)
TGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAAC‑ACAAAATAAAG < SRR4302533.4128528/94‑1 (MQ=60)
GGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAATAAAATAAAG < SRR4302533.1028464/94‑1 (MQ=60)
GGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAG < SRR4302533.250390/94‑1 (MQ=60)
GGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTGCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAG < SRR4302533.5672246/94‑1 (MQ=60)
GGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGA < SRR4302533.3937984/94‑1 (MQ=60)
GAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGAT < SRR4302533.641168/94‑1 (MQ=60)
GAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGAT < SRR4302533.6310522/94‑1 (MQ=60)
GAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGAT > SRR4302533.5607344/1‑94 (MQ=60)
AGGTGAATTTTGTGATGCAGATCGGTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCACCGAAAGGCGGTTGCCAACAACAAAATCAAGATG > SRR4302533.2886853/1‑94 (MQ=60)
AGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGGAAGGCGGTTCCCAACAACAAAATAAAGATG > SRR4302533.4282013/1‑94 (MQ=60)
AGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATG < SRR4302533.571945/94‑1 (MQ=60)
AGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATG > SRR4302533.2886852/1‑94 (MQ=60)
GGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGG > SRR4302533.3114113/1‑94 (MQ=60)
TGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGA < SRR4302533.3088784/94‑1 (MQ=60)
TAATTTTGTGATGCAGGTCGCTTTTTCCCTACAGGCATTTCTGTTTAATACAATCAACGAAAGGCGGTTCCCAGCAACAAAATAAAGATGGGAG < SRR4302533.5543990/94‑1 (MQ=60)
GAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAG < SRR4302533.4660918/94‑1 (MQ=60)
TTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTA > SRR4302533.1034720/1‑94 (MQ=60)
TTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAA < SRR4302533.2971477/94‑1 (MQ=60)
TTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAA > SRR4302533.3165463/1‑94 (MQ=60)
TTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAA > SRR4302533.2031314/1‑94 (MQ=60)
TGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA < SRR4302533.92080/94‑1 (MQ=60)
GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAA > SRR4302533.1555198/1‑94 (MQ=60)
GATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATG > SRR4302533.5874596/1‑94 (MQ=60)
TGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGAAAAAATGAA > SRR4302533.5314331/1‑94 (MQ=60)
CAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAC < SRR4302533.3608618/94‑1 (MQ=60)
CAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAC < SRR4302533.193913/94‑1 (MQ=60)
CAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAC < SRR4302533.1001510/94‑1 (MQ=60)
AGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACG > SRR4302533.4043425/1‑94 (MQ=60)
AGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACG > SRR4302533.5424891/1‑94 (MQ=60)
AGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACG < SRR4302533.1021562/94‑1 (MQ=60)
AGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACG < SRR4302533.3934908/94‑1 (MQ=60)
GATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGG < SRR4302533.955122/94‑1 (MQ=60)
GATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGG > SRR4302533.521262/1‑94 (MQ=60)
ATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGG > SRR4302533.3424103/1‑94 (MQ=60)
TCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTG > SRR4302533.5868318/1‑94 (MQ=60)
CGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGG > SRR4302533.391507/1‑94 (MQ=60)
CGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGG < SRR4302533.5865256/94‑1 (MQ=60)
CGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGG > SRR4302533.4344838/1‑94 (MQ=60)
GCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGG < SRR4302533.1939082/94‑1 (MQ=60)
GCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGG < SRR4302533.722521/94‑1 (MQ=60)
GCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGG < SRR4302533.744746/94‑1 (MQ=60)
CTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAGCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGA > SRR4302533.1994928/1‑94 (MQ=60)
TTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAA < SRR4302533.4156031/94‑1 (MQ=60)
CCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGC > SRR4302533.6266057/1‑94 (MQ=60)
CCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCT > SRR4302533.2658602/1‑94 (MQ=60)
CTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTT < SRR4302533.1499971/94‑1 (MQ=60)
TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT > SRR4302533.926137/1‑94 (MQ=60)
TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT > SRR4302533.1053409/1‑94 (MQ=60)
TTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTT > SRR4302533.5785288/1‑94 (MQ=60)
CAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTAC < SRR4302533.4703010/94‑1 (MQ=60)
AGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACT < SRR4302533.6110876/94‑1 (MQ=60)
AGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACT < SRR4302533.2384357/94‑1 (MQ=60)
AGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGAAAAAATGAAACGGTGGGAAGTGGCTTTACT > SRR4302533.5621133/1‑94 (MQ=60)
GCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGG < SRR4302533.697985/94‑1 (MQ=60)
GCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGG < SRR4302533.5563966/94‑1 (MQ=60)
GCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGG > SRR4302533.3090785/1‑94 (MQ=60)
ATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTG < SRR4302533.3109431/94‑1 (MQ=60)
ATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTG > SRR4302533.5406486/1‑94 (MQ=60)
TTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGAT < SRR4302533.6271363/94‑1 (MQ=60)
TTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGG > SRR4302533.6224319/1‑94 (MQ=60)
GTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTA < SRR4302533.750081/94‑1 (MQ=60)
GTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTA < SRR4302533.2650064/94‑1 (MQ=60)
TTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGCGGCTTTACTGGTGATGGTAAT > SRR4302533.1590354/1‑94 (MQ=60)
TAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATG > SRR4302533.4669474/1‑94 (MQ=60)
ATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTT > SRR4302533.203716/1‑94 (MQ=60)
ATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTT < SRR4302533.464367/94‑1 (MQ=60)
TTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTG < SRR4302533.3482360/94‑1 (MQ=60)
TCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGG < SRR4302533.4690872/94‑1 (MQ=60)
CAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGT > SRR4302533.5599580/1‑94 (MQ=60)
AATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACatacagcagatcggaagagcggttcagcaggaatgccg > SRR4302533.966509/1‑56 (MQ=60)
AATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTT < SRR4302533.984979/94‑1 (MQ=60)
AATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTT > SRR4302533.1237098/1‑94 (MQ=60)
AATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTT < SRR4302533.455059/94‑1 (MQ=60)
ATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTT < SRR4302533.6064162/94‑1 (MQ=60)
TCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTG > SRR4302533.163926/1‑94 (MQ=60)
TCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTG > SRR4302533.2158561/1‑94 (MQ=60)
CAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGGAATGTTGGTTTGC > SRR4302533.2441759/1‑94 (MQ=60)
AACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCT > SRR4302533.6154594/1‑94 (MQ=60)
CGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGT > SRR4302533.5874957/1‑94 (MQ=60)
CGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGT < SRR4302533.807152/94‑1 (MQ=60)
GAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTA < SRR4302533.3943660/94‑1 (MQ=60)
AAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATT > SRR4302533.5636235/1‑94 (MQ=60)
AAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATT < SRR4302533.1786930/94‑1 (MQ=60)
AAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATT < SRR4302533.601430/94‑1 (MQ=60)
AGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTG < SRR4302533.4889663/94‑1 (MQ=60)
GCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAA < SRR4302533.1132410/94‑1 (MQ=60)
CGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAC > SRR4302533.5236850/1‑94 (MQ=60)
GGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT > SRR4302533.1920615/1‑94 (MQ=60)
GGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT > SRR4302533.4971921/1‑94 (MQ=60)
|
TCCCACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACT > NC_000913/2561410‑2561596
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
