Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,597,825 A→G intergenic (‑45/‑101) dapA ← / → b2479 dihydrodipicolinate synthase/GcvR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,597,8250AG99.3% 1319.5 / ‑2.1 409intergenic (‑45/‑101)dapA/b2479dihydrodipicolinate synthase/GcvR
Reads supporting (aligned to +/- strand):  ref base A (1/2);  new base G (219/187);  total (220/189)
Fisher's exact test for biased strand distribution p-value = 5.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.33e-01

Only 100 of 424 total aligned reads displayed.

TTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTATGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAG  >  NC_000913/2597735‑2597914
                                                                                          |                                                                                         
tttCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGtgtg                                                                                         <  1:5990811/93‑1 (MQ=255)
tttCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATAGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGtgtg                                                                                         >  2:6171972/1‑93 (MQ=255)
   catccatcGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCa                                                                                      >  1:3367086/1‑93 (MQ=255)
    atccatcGGAGTAACAATCGCGAGAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCAt                                                                                     <  2:1263087/93‑1 (MQ=255)
    atccatcGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCAt                                                                                     >  1:4390551/1‑93 (MQ=255)
    atccatcGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCAt                                                                                     <  1:4030496/93‑1 (MQ=255)
    atccatcGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCAt                                                                                     >  1:6284759/1‑93 (MQ=255)
     tccatcGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCAtt                                                                                    >  1:3081892/1‑93 (MQ=255)
     tccatcGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCAtt                                                                                    >  2:432795/1‑93 (MQ=255)
     tccatcGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCAtt                                                                                    >  1:2799957/1‑93 (MQ=255)
     tccatcGGAGGAACAATCGCGACAATACTTCCCGGGAACATGTGCCATCCTCTGTCGAAGCAAGTGTGTCAATGGTACGGTTGGTGTGGCAtt                                                                                    >  2:6783170/1‑93 (MQ=255)
         tcGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTaaaa                                                                                >  2:9179451/1‑93 (MQ=255)
         tcGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTaaaa                                                                                >  2:6816995/1‑93 (MQ=255)
          cGGAGTAACAATGGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAaag                                                                               <  1:1407925/93‑1 (MQ=255)
            gAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAaagca                                                                             <  2:6617551/93‑1 (MQ=255)
            gAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAaagca                                                                             <  2:1766917/93‑1 (MQ=255)
             aGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAaagcaa                                                                            >  1:5453951/1‑93 (MQ=255)
               tAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAaagcaagc                                                                          >  1:2267311/1‑93 (MQ=255)
               tAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAaagcaagc                                                                          >  2:57528/1‑93 (MQ=255)
               tAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTATGGCATTAAaagcaagc                                                                          <  2:4751328/93‑1 (MQ=255)
                 aCAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGcag                                                                        >  2:6245399/1‑93 (MQ=255)
                  cAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCACGcaga                                                                       >  1:833637/1‑93 (MQ=255)
                  cAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGcaga                                                                       <  2:1985663/93‑1 (MQ=255)
                    aTCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGcagaca                                                                     <  2:742581/93‑1 (MQ=255)
                    aTCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGcagaca                                                                     <  1:9454593/93‑1 (MQ=255)
                    aTCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGcagaca                                                                     >  1:1231702/1‑93 (MQ=255)
                     tCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGcagacag                                                                    <  1:4775134/93‑1 (MQ=255)
                      cgcgACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGcagacaga                                                                   <  1:2710727/93‑1 (MQ=255)
                      cgcgACAATACTTCCCGTGAACATGAGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGcagacaga                                                                   <  1:7692476/93‑1 (MQ=255)
                       gcgACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGaa                                                                  >  1:3537363/1‑93 (MQ=255)
                       gcgACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGaa                                                                  <  1:1637057/93‑1 (MQ=255)
                        cgACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAAc                                                                 <  2:4803455/93‑1 (MQ=255)
                         gACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAAcc                                                                >  1:1191077/1‑93 (MQ=255)
                          aCAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCg                                                               >  1:7766927/1‑93 (MQ=255)
                          aCAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCg                                                               >  2:5929650/1‑93 (MQ=255)
                           cAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGt                                                              >  1:9515887/1‑93 (MQ=255)
                           cAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGt                                                              >  2:7961657/1‑93 (MQ=255)
                            aaTACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGtt                                                             >  2:2250892/1‑93 (MQ=255)
                             aTACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTc                                                            <  2:7109585/93‑1 (MQ=255)
                             aTACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTc                                                            >  2:7192723/1‑93 (MQ=255)
                             aTACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTc                                                            <  1:9885387/93‑1 (MQ=255)
                             aTACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTc                                                            >  1:6630705/1‑93 (MQ=255)
                             aTACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTc                                                            <  2:555394/93‑1 (MQ=255)
                              tACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCt                                                           >  1:3251472/1‑93 (MQ=255)
                               aCTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGGGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACGGCACCGTTCTg                                                          >  1:5037855/1‑93 (MQ=255)
                                cTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGa                                                         <  2:171406/93‑1 (MQ=255)
                                 ttCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGAt                                                        <  1:4649074/93‑1 (MQ=255)
                                 ctCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGAt                                                        <  2:2823256/92‑1 (MQ=255)
                                   cccGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTTAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGAttg                                                      >  2:1320039/1‑93 (MQ=255)
                                    ccGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTCAAAGCAAGCAGACAGAGCCGTTCTGAttgt                                                     >  1:9019262/1‑93 (MQ=255)
                                     cGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGAttgtt                                                    >  2:8887365/1‑93 (MQ=255)
                                      gTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGAttgttg                                                   >  1:5174088/1‑93 (MQ=255)
                                      gTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGAttgttg                                                   >  2:3570036/1‑93 (MQ=255)
                                        gAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTa                                                 >  1:7311379/1‑93 (MQ=255)
                                         aaCATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTAt                                                <  2:9252732/93‑1 (MQ=255)
                                          aCATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATg                                               <  1:7996483/93‑1 (MQ=255)
                                             tGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCAt                                            >  1:2896729/1‑93 (MQ=255)
                                              gggCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATg                                           <  2:4466176/93‑1 (MQ=255)
                                               ggCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGt                                          <  1:4326463/93‑1 (MQ=255)
                                               ggCCATCCTCTGTGCAAACAAGGGCCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGt                                          >  2:8381284/1‑93 (MQ=255)
                                                  cATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGtttt                                       <  2:9507435/93‑1 (MQ=255)
                                                   aTCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGttttt                                      >  1:5802845/1‑93 (MQ=255)
                                                    tCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACGGTTCTGATTGTTGTATGCGTGtttttt                                     >  1:1951604/1‑93 (MQ=255)
                                                     ccTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGttttttt                                    >  1:7348809/1‑93 (MQ=255)
                                                      ctctGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGtttttttt                                   <  1:8628545/93‑1 (MQ=255)
                                                      ctctGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGAAGACAGAACCGTTCTGATTGTTGTATGCATGtttttttt                                   >  1:5279892/1‑93 (MQ=255)
                                                        ctGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTAt                                 <  2:6511814/93‑1 (MQ=255)
                                                         tgtgCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATg                                <  2:5355446/93‑1 (MQ=255)
                                                          gtgCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGc                               >  1:6925506/1‑93 (MQ=255)
                                                            gCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCtt                             <  2:93482/93‑1 (MQ=255)
                                                            gCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCtt                             <  2:20604/93‑1 (MQ=255)
                                                            gCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCtt                             >  1:3876943/1‑93 (MQ=255)
                                                             cAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCttt                            <  2:255193/93‑1 (MQ=255)
                                                              aaaCAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTc                           <  2:6968262/93‑1 (MQ=255)
                                                              aaaCAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTc                           <  2:8494750/93‑1 (MQ=255)
                                                              aaaCAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTc                           <  2:3399660/93‑1 (MQ=255)
                                                               aaCAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTcc                          <  2:1572525/93‑1 (MQ=255)
                                                                 cAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCtt                        >  1:9629093/1‑93 (MQ=255)
                                                                  aaGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTa                       <  1:9771918/93‑1 (MQ=255)
                                                                   aGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTaa                      <  1:6404095/93‑1 (MQ=255)
                                                                   aGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTaa                      >  1:1103336/1‑93 (MQ=255)
                                                                      gtCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGaa                   <  1:7540921/93‑1 (MQ=255)
                                                                      gtCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGaa                   >  2:3259633/1‑93 (MQ=255)
                                                                       tctcAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATTCATGTTTTTTTTATGCTTTCCTTAAGaac                  <  1:7072464/93‑1 (MQ=255)
                                                                       tctcAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGaac                  <  2:7591482/93‑1 (MQ=255)
                                                                         tcAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGaacaa                <  2:3523289/93‑1 (MQ=255)
                                                                         tcAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGaacaa                >  2:5999693/1‑93 (MQ=255)
                                                                          cAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGaacaac               >  1:8535206/1‑93 (MQ=255)
                                                                            aTGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTc             <  1:4154736/93‑1 (MQ=255)
                                                                             tGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCa            <  1:2466496/93‑1 (MQ=255)
                                                                             tGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCa            <  2:3745437/93‑1 (MQ=255)
                                                                              gttACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCAc           <  2:4120513/91‑1 (MQ=255)
                                                                               gTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCAcc          <  2:802010/93‑1 (MQ=255)
                                                                                tACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCAccc         <  1:175327/93‑1 (MQ=255)
                                                                                  cGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCt       <  1:2005126/93‑1 (MQ=255)
                                                                                   gTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCtt      >  2:3871442/1‑93 (MQ=255)
                                                                                   gTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCtt      <  2:8762872/93‑1 (MQ=255)
                                                                                       ggTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAg  <  1:8064684/93‑1 (MQ=255)
                                                                                       ggTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAg  <  2:5199587/93‑1 (MQ=255)
                                                                                       ggTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAg  <  1:9311350/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTATGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAG  >  NC_000913/2597735‑2597914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 234 total aligned reads displayed.
CTTTTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTATGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAGGAAT  >  NC_000913/2597732‑2597918
                                                                                             |                                                                                             
CTTTTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGACCATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTG                                                                                               >  SRR4302540.7745783/1‑94 (MQ=60)
CTTTTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTG                                                                                               >  SRR4302540.7501694/1‑94 (MQ=60)
CTTTTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTG                                                                                               >  SRR4302540.9003775/1‑94 (MQ=60)
CTTTTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTG                                                                                               >  SRR4302540.7745782/1‑94 (MQ=60)
 TTTTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGT                                                                                              >  SRR4302540.470950/1‑94 (MQ=60)
 TTTTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGT                                                                                              >  SRR4302540.9692319/1‑94 (MQ=60)
  TTTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTG                                                                                             <  SRR4302540.1487216/94‑1 (MQ=60)
  TTTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTG                                                                                             <  SRR4302540.1035662/94‑1 (MQ=60)
   TTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGG                                                                                            <  SRR4302540.1550418/94‑1 (MQ=60)
   TTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGG                                                                                            <  SRR4302540.1979824/94‑1 (MQ=60)
     TCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCA                                                                                          >  SRR4302540.3403918/1‑94 (MQ=60)
     TCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGCGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCA                                                                                          >  SRR4302540.4810614/1‑94 (MQ=60)
      CATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCAT                                                                                         >  SRR4302540.4438197/1‑94 (MQ=60)
      CATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCAT                                                                                         >  SRR4302540.6354705/1‑94 (MQ=60)
      CATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCAT                                                                                         <  SRR4302540.9258103/94‑1 (MQ=60)
       ATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATT                                                                                        <  SRR4302540.2484277/94‑1 (MQ=60)
       ATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATT                                                                                        >  SRR4302540.2830198/1‑94 (MQ=60)
        TCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTA                                                                                       <  SRR4302540.6938696/94‑1 (MQ=60)
        TCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTA                                                                                       <  SRR4302540.1690722/94‑1 (MQ=60)
         CCATGGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGTCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAA                                                                                      <  SRR4302540.335055/94‑1 (MQ=60)
         CCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAA                                                                                      >  SRR4302540.2087329/1‑94 (MQ=60)
          CATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAA                                                                                     <  SRR4302540.3825389/94‑1 (MQ=60)
          CATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAA                                                                                     >  SRR4302540.6765166/1‑94 (MQ=60)
           ATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAA                                                                                    >  SRR4302540.7482845/1‑94 (MQ=60)
            TCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAG                                                                                   >  SRR4302540.2811596/1‑94 (MQ=60)
             CGGAGTAACAATGGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGC                                                                                  <  SRR4302540.1423084/94‑1 (MQ=60)
              GGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCA                                                                                 >  SRR4302540.8094046/1‑94 (MQ=60)
              GGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCA                                                                                 >  SRR4302540.5246264/1‑94 (MQ=60)
               GAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAA                                                                                >  SRR4302540.5513978/1‑94 (MQ=60)
               GAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAA                                                                                <  SRR4302540.5045684/94‑1 (MQ=60)
                 GTAACAATCGCGACAATACTTCCCGTGAACATGGGCCCTCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAACGCAAGA                                                                              >  SRR4302540.4381805/1‑94 (MQ=60)
                 GTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGC                                                                              >  SRR4302540.281741/1‑94 (MQ=60)
                 GTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGC                                                                              >  SRR4302540.2291639/1‑94 (MQ=60)
                 GTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGC                                                                              >  SRR4302540.8699035/1‑94 (MQ=60)
                 GTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGAAAGC                                                                              >  SRR4302540.2576867/1‑94 (MQ=60)
                  TAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCA                                                                             <  SRR4302540.3322244/94‑1 (MQ=60)
                   AACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAG                                                                            <  SRR4302540.408878/94‑1 (MQ=60)
                   AACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAG                                                                            <  SRR4302540.5840023/94‑1 (MQ=60)
                    ACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCACGCAGA                                                                           >  SRR4302540.842488/1‑94 (MQ=60)
                    ACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGA                                                                           <  SRR4302540.2164045/94‑1 (MQ=60)
                    ACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGA                                                                           <  SRR4302540.922167/94‑1 (MQ=60)
                     AAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGAC                                                                          <  SRR4302540.473068/94‑1 (MQ=60)
                      AATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACA                                                                         <  SRR4302540.4958795/94‑1 (MQ=60)
                      AATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACA                                                                         <  SRR4302540.8265501/94‑1 (MQ=60)
                      AATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACA                                                                         >  SRR4302540.9756362/1‑94 (MQ=60)
                      AATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACA                                                                         >  SRR4302540.1244279/1‑94 (MQ=60)
                      AATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACA                                                                         >  SRR4302540.7633950/1‑94 (MQ=60)
                      AATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACA                                                                         >  SRR4302540.1360332/1‑94 (MQ=60)
                       ATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAG                                                                        <  SRR4302540.9828868/94‑1 (MQ=60)
                       ATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAG                                                                        <  SRR4302540.1681455/94‑1 (MQ=60)
                       ATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAG                                                                        >  SRR4302540.7419156/1‑94 (MQ=60)
                       ATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAG                                                                        <  SRR4302540.9566804/94‑1 (MQ=60)
                       ATCCCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAG                                                                        <  SRR4302540.1681454/94‑1 (MQ=60)
                        TCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGA                                                                       <  SRR4302540.4826147/94‑1 (MQ=60)
                         CGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAA                                                                      >  SRR4302540.3575986/1‑94 (MQ=60)
                         CGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAA                                                                      >  SRR4302540.4469001/1‑94 (MQ=60)
                         CGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAA                                                                      <  SRR4302540.2739957/94‑1 (MQ=60)
                         CGCGACAATACTTCCCGTGAACATGAGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAA                                                                      <  SRR4302540.7780003/94‑1 (MQ=60)
                          GCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAAC                                                                     <  SRR4302540.1654954/94‑1 (MQ=60)
                           CGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACC                                                                    <  SRR4302540.5215011/94‑1 (MQ=60)
                           CGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACC                                                                    <  SRR4302540.3204518/94‑1 (MQ=60)
                           CGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACC                                                                    >  SRR4302540.1203354/1‑94 (MQ=60)
                            GACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCG                                                                   >  SRR4302540.6447908/1‑94 (MQ=60)
                            GACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCG                                                                   >  SRR4302540.7857730/1‑94 (MQ=60)
                            GACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCG                                                                   >  SRR4302540.9460531/1‑94 (MQ=60)
                            GACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCG                                                                   >  SRR4302540.8580909/1‑94 (MQ=60)
                             ACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGCACCGT                                                                  >  SRR4302540.9570577/1‑94 (MQ=60)
                             ACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGT                                                                  >  SRR4302540.9628589/1‑94 (MQ=60)
                             ACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGT                                                                  >  SRR4302540.9570579/1‑94 (MQ=60)
                              CAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTT                                                                 >  SRR4302540.2539147/1‑94 (MQ=60)
                               AATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTC                                                                <  SRR4302540.9401209/94‑1 (MQ=60)
                               AATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTC                                                                >  SRR4302540.6704102/1‑94 (MQ=60)
                               AATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGATACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTC                                                                >  SRR4302540.6567152/1‑94 (MQ=60)
                                ATACTTCCCGTGAACATGGGTCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCT                                                               >  SRR4302540.2845783/1‑94 (MQ=60)
                                ATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCT                                                               <  SRR4302540.7668254/94‑1 (MQ=60)
                                ATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCT                                                               <  SRR4302540.10000810/94‑1 (MQ=60)
                                ATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCT                                                               <  SRR4302540.9334681/94‑1 (MQ=60)
                                ATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCT                                                               >  SRR4302540.3286898/1‑94 (MQ=60)
                                 TACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTG                                                              <  SRR4302540.7413527/94‑1 (MQ=60)
                                 TACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTG                                                              >  SRR4302540.3003611/1‑94 (MQ=60)
                                 TACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTG                                                              >  SRR4302540.1982990/1‑94 (MQ=60)
                                 TACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGGGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACGGCACCGTTCTG                                                              >  SRR4302540.5092350/1‑94 (MQ=60)
                                  ACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGA                                                             >  SRR4302540.3631046/1‑94 (MQ=60)
                                  ACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGA                                                             >  SRR4302540.5950917/1‑94 (MQ=60)
                                    TTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATT                                                           <  SRR4302540.4698837/94‑1 (MQ=60)
                                     TCCCGTGAACATGTGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTG                                                          <  SRR4302540.8333802/94‑1 (MQ=60)
                                       CCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTT                                                        <  SRR4302540.9489475/94‑1 (MQ=60)
                                       CCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTT                                                        <  SRR4302540.5399998/94‑1 (MQ=60)
                                       CCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTT                                                        >  SRR4302540.5308154/1‑94 (MQ=60)
                                        CGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTG                                                       >  SRR4302540.5230403/1‑94 (MQ=60)
                                         GTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGT                                                      >  SRR4302540.994909/1‑94 (MQ=60)
                                         GTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGT                                                      >  SRR4302540.6637402/1‑94 (MQ=60)
                                          TGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTA                                                     >  SRR4302540.7393011/1‑94 (MQ=60)
                                          TGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTA                                                     >  SRR4302540.1738264/1‑94 (MQ=60)
                                          TGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTA                                                     >  SRR4302540.6462961/1‑94 (MQ=60)
                                          TGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTA                                                     <  SRR4302540.750424/94‑1 (MQ=60)
                                          TGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTA                                                     <  SRR4302540.986342/94‑1 (MQ=60)
                                          TGAACATGGGCCATCCTCTATGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTA                                                     >  SRR4302540.861991/1‑94 (MQ=60)
                                           GAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTAT                                                    <  SRR4302540.7802047/94‑1 (MQ=60)
                                           GAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTAT                                                    <  SRR4302540.4223506/94‑1 (MQ=60)
                                           GAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTAT                                                    <  SRR4302540.459701/94‑1 (MQ=60)
                                           CAACATGCGCCATCCTGCGTGCAGACAAGTGTCTCAACGGTACGTTTCGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTAT                                                    <  SRR4302540.459703/94‑1 (MQ=60)
                                            AACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATG                                                   <  SRR4302540.824732/94‑1 (MQ=60)
                                             ACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGC                                                  >  SRR4302540.7418442/1‑94 (MQ=60)
                                             ACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGC                                                  >  SRR4302540.8956020/1‑94 (MQ=60)
                                             ACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGC                                                  >  SRR4302540.998067/1‑94 (MQ=60)
                                              CATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCA                                                 <  SRR4302540.6349042/94‑1 (MQ=60)
                                               ATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCAT                                                <  SRR4302540.2119881/94‑1 (MQ=60)
                                               ATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCAT                                                >  SRR4302540.2928317/1‑94 (MQ=60)
                                               ATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCAT                                                <  SRR4302540.356634/94‑1 (MQ=60)
                                                TGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATG                                               <  SRR4302540.1407506/94‑1 (MQ=60)
                                                TGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATG                                               <  SRR4302540.5395682/94‑1 (MQ=60)
                                                TGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATG                                               <  SRR4302540.3186500/94‑1 (MQ=60)
                                                TGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATG                                               <  SRR4302540.7047902/94‑1 (MQ=60)
                                                 GGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGT                                              >  SRR4302540.4132241/1‑94 (MQ=60)
                                                 GGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGT                                              >  SRR4302540.4132242/1‑94 (MQ=60)
                                                  GGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTT                                             <  SRR4302540.4373566/94‑1 (MQ=60)
                                                  GGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTT                                             <  SRR4302540.6769306/94‑1 (MQ=60)
                                                  GGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTT                                             <  SRR4302540.4373565/94‑1 (MQ=60)
                                                     CATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTT                                          <  SRR4302540.3527948/94‑1 (MQ=60)
                                                     CATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTT                                          >  SRR4302540.7826764/1‑94 (MQ=60)
                                                     CATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTT                                          >  SRR4302540.7897840/1‑94 (MQ=60)
                                                     CATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTT                                          >  SRR4302540.10075307/1‑94 (MQ=60)
                                                     CATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTT                                          >  SRR4302540.5866961/1‑94 (MQ=60)
                                                     CATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTT                                          <  SRR4302540.5970008/94‑1 (MQ=60)
                                                      ATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACGGTTCTGATTGTTGTATGCGTGTTTTTT                                         >  SRR4302540.1972837/1‑94 (MQ=60)
                                                      ATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTT                                         >  SRR4302540.6116090/1‑94 (MQ=60)
                                                      ATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTT                                         <  SRR4302540.1212458/94‑1 (MQ=60)
                                                      ATCCTCTGTGCAAACAAGTGGCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGCTTGTTGTATGCATGTTTTTT                                         >  SRR4302540.1885186/1‑94 (MQ=60)
                                                       TCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTT                                        >  SRR4302540.7430799/1‑94 (MQ=60)
                                                        CCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTT                                       >  SRR4302540.2988360/1‑94 (MQ=60)
                                                        CCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTT                                       >  SRR4302540.2343401/1‑94 (MQ=60)
                                                        CCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGAAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTT                                       >  SRR4302540.5337559/1‑94 (MQ=60)
                                                        CCTCTGTGCAAACAAGTGTCTCAATGATACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTT                                       >  SRR4302540.2835861/1‑94 (MQ=60)
                                                        CCTCTGTGCAAACAAGTGTCTCAATGATACGTTTGGTGTGGCATTAAAACAAAGCAGACAGAACCGTTCTCATTGTTGTATGCATGTTTTTTTT                                       >  SRR4302540.2835860/1‑94 (MQ=60)
                                                         CTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCGGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTA                                      >  SRR4302540.5179452/1‑94 (MQ=60)
                                                         CTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTA                                      <  SRR4302540.8728768/94‑1 (MQ=60)
                                                         CTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTA                                      >  SRR4302540.2722951/1‑94 (MQ=60)
                                                         CTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTA                                      <  SRR4302540.8728769/94‑1 (MQ=60)
                                                          TCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTAT                                     <  SRR4302540.7063944/94‑1 (MQ=60)
                                                          TCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTAT                                     <  SRR4302540.8460200/94‑1 (MQ=60)
                                                          TCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTAT                                     >  SRR4302540.3716746/1‑94 (MQ=60)
                                                          TCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTAT                                     <  SRR4302540.8128685/94‑1 (MQ=60)
                                                            TGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGC                                   >  SRR4302540.7002581/1‑94 (MQ=60)
                                                            TGTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGC                                   >  SRR4302540.4046881/1‑94 (MQ=60)
                                                             GTGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCT                                  >  SRR4302540.4416629/1‑94 (MQ=60)
                                                              TGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTT                                 >  SRR4302540.3919078/1‑94 (MQ=60)
                                                              TGCAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTT                                 <  SRR4302540.6001356/94‑1 (MQ=60)
                                                                CAAACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTC                               <  SRR4302540.2357727/94‑1 (MQ=60)
                                                                  AACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCT                             >  SRR4302540.1241199/1‑94 (MQ=60)
                                                                   ACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTCTGCTTTCCTT                            >  SRR4302540.9742560/1‑94 (MQ=60)
                                                                   ACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTT                            >  SRR4302540.3948865/1‑94 (MQ=60)
                                                                   ACAAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTT                            >  SRR4302540.9742561/1‑94 (MQ=60)
                                                                     AAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAA                          >  SRR4302540.4413963/1‑94 (MQ=60)
                                                                     AAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAA                          <  SRR4302540.1849004/94‑1 (MQ=60)
                                                                     AAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAA                          >  SRR4302540.1114710/1‑94 (MQ=60)
                                                                     AAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAA                          >  SRR4302540.7156557/1‑94 (MQ=60)
                                                                     AAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAA                          >  SRR4302540.1114712/1‑94 (MQ=60)
                                                                     AAGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAA                          <  SRR4302540.9886480/94‑1 (MQ=60)
                                                                      AGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAG                         <  SRR4302540.1996282/94‑1 (MQ=60)
                                                                      AGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAG                         <  SRR4302540.6475379/94‑1 (MQ=60)
                                                                      AGTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAG                         <  SRR4302540.4984499/94‑1 (MQ=60)
                                                                       GTGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGA                        <  SRR4302540.9570960/94‑1 (MQ=60)
                                                                        TGTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAA                       >  SRR4302540.6447898/1‑94 (MQ=60)
                                                                         GTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAAC                      <  SRR4302540.7625406/94‑1 (MQ=60)
                                                                         GTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAAC                      <  SRR4302540.9700101/94‑1 (MQ=60)
                                                                         GTCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAAA                      >  SRR4302540.5167365/1‑94 (MQ=60)
                                                                          TCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATTCATGTTTTTTTTATGCTTTCCTTAAGAACA                     <  SRR4302540.7151143/94‑1 (MQ=60)
                                                                          TCTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACA                     >  SRR4302540.310772/1‑94 (MQ=60)
                                                                           CTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAA                    >  SRR4302540.7321263/1‑94 (MQ=60)
                                                                           CTCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAA                    >  SRR4302540.7990682/1‑94 (MQ=60)
                                                                            TCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAAC                   <  SRR4302540.301711/94‑1 (MQ=60)
                                                                            TCAATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAAC                   >  SRR4302540.8634372/1‑94 (MQ=60)
                                                                              AATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACATCTC                 >  SRR4302540.7701448/1‑94 (MQ=60)
                                                                              AATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTA                 >  SRR4302540.6186792/1‑94 (MQ=60)
                                                                              AATGGTACGGTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTC                 <  SRR4302540.5411432/94‑1 (MQ=60)
                                                                               ATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCA                <  SRR4302540.4199742/94‑1 (MQ=60)
                                                                               ATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCA                >  SRR4302540.808435/1‑94 (MQ=60)
                                                                               ATGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCA                >  SRR4302540.4337368/1‑94 (MQ=60)
                                                                                TGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCAC               <  SRR4302540.2493043/94‑1 (MQ=60)
                                                                                TGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCAC               >  SRR4302540.6200000/1‑94 (MQ=60)
                                                                                TGGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCAC               <  SRR4302540.1237903/94‑1 (MQ=60)
                                                                                 GGTACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAAGCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACC              >  SRR4302540.5796369/1‑94 (MQ=60)
                                                                                   TACGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCC            <  SRR4302540.177075/94‑1 (MQ=60)
                                                                                     CGTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTT          <  SRR4302540.397279/94‑1 (MQ=60)
                                                                                      GTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTA         >  SRR4302540.3134920/1‑94 (MQ=60)
                                                                                      GTTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTA         <  SRR4302540.1125786/94‑1 (MQ=60)
                                                                                       TTTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAA        >  SRR4302540.8795807/1‑94 (MQ=60)
                                                                                        TTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAA       >  SRR4302540.7136063/1‑94 (MQ=60)
                                                                                        TTGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAA       >  SRR4302540.3540250/1‑94 (MQ=60)
                                                                                         TGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAG      <  SRR4302540.890189/94‑1 (MQ=60)
                                                                                         TGGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAG      >  SRR4302540.7923503/1‑94 (MQ=60)
                                                                                         TGGTGTGGCATTAAAAGCAAGCAAACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAG      >  SRR4302540.1592152/1‑94 (MQ=60)
                                                                                          GGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAGG     <  SRR4302540.9422503/94‑1 (MQ=60)
                                                                                          GGTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAGG     <  SRR4302540.8158279/94‑1 (MQ=60)
                                                                                           GTGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAGGA    >  SRR4302540.611756/1‑94 (MQ=60)
                                                                                            TGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAGGAA   <  SRR4302540.9893888/94‑1 (MQ=60)
                                                                                            TGTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAGGAA   >  SRR4302540.1441302/1‑94 (MQ=60)
                                                                                             GTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAGGAAT  >  SRR4302540.6377707/1‑94 (MQ=60)
                                                                                             GTGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAGGAAT  <  SRR4302540.7099415/94‑1 (MQ=60)
                                                                                             |                                                                                             
CTTTTTCATCCATCGGAGTAACAATCGCGACAATACTTCCCGTGAACATGGGCCATCCTCTGTGCAAACAAGTGTCTCAATGGTACGTTTGGTATGGCATTAAAAGCAAGCAGACAGAACCGTTCTGATTGTTGTATGCATGTTTTTTTTATGCTTTCCTTAAGAACAACTCACCCCTTAAAGGAAT  >  NC_000913/2597732‑2597918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑