Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,600,037 (C)7→6 coding (200/2019 nt) hyfB → hydrogenase 4 membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,600,0310C.92.2% 1068.9 / 69.6 282coding (194/2019 nt)hyfBhydrogenase 4 membrane subunit
Reads supporting (aligned to +/- strand):  ref base C (14/8);  new base . (129/131);  total (143/139)
Fisher's exact test for biased strand distribution p-value = 2.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01

Only 100 of 306 total aligned reads displayed.

TTCCGGCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTT  >  NC_000913/2599939‑2600119
                                                                                            |                                                                                        
 tCCGGCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGcc                                                                                         <  1:9952950/93‑1 (MQ=255)
   cGGCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGcccc                                                                                       <  2:4969903/93‑1 (MQ=255)
      cATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGcccccct                                                                                    <  2:8546759/93‑2 (MQ=255)
      cATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGcccccct                                                                                    >  1:9591066/1‑92 (MQ=255)
        tCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCttt                                                                                  >  1:7413142/1‑93 (MQ=255)
        tCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCtt                                                                                  >  1:6308546/1‑93 (MQ=255)
           caTCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGa                                                                              >  1:7477437/1‑93 (MQ=255)
           caTCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGa                                                                              >  2:651639/1‑93 (MQ=255)
            aTCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGaa                                                                             >  1:2022772/1‑93 (MQ=255)
            aTCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGaa                                                                             <  1:3763690/93‑1 (MQ=255)
             tCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAAt                                                                            >  2:7985967/1‑93 (MQ=255)
              cGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAAtt                                                                           <  1:1488244/93‑1 (MQ=255)
               gCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAAttg                                                                          >  1:3577486/1‑92 (MQ=255)
                 tggtggGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTGAATTTg                                                                         >  2:8340803/1‑93 (MQ=255)
                 tggtggGCGGCGTGATAGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGc                                                                        >  1:6612654/1‑93 (MQ=255)
                  ggtggGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGcc                                                                       >  2:369705/1‑93 (MQ=255)
                  ggtggGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑ACCCCCTTTTGAATTTGcc                                                                       >  2:256586/1‑93 (MQ=255)
                   gtggGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCg                                                                      >  1:6575168/1‑93 (MQ=255)
                    tggGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGa                                                                     <  2:9121477/93‑1 (MQ=255)
                     gggCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGAt                                                                    <  2:4914961/93‑1 (MQ=255)
                     gggCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGAt                                                                    <  2:5099170/93‑1 (MQ=255)
                     gggCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGAt                                                                    <  1:2588276/93‑1 (MQ=255)
                     gggCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGAt                                                                    >  2:7470515/1‑93 (MQ=255)
                      ggcggcGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGAtt                                                                   <  2:585683/93‑1 (MQ=255)
                      ggcggcGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGAtt                                                                   <  1:59335/93‑1 (MQ=255)
                       gcggcgTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGAttt                                                                  <  2:4695258/93‑1 (MQ=255)
                       gcggcgTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGAttt                                                                  >  2:219760/1‑93 (MQ=255)
                       gcggcgTGATTGGCATCATCAGCGGAATTACACAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGAttt                                                                  <  1:5127425/93‑1 (MQ=255)
                        cggcgTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTa                                                                 >  2:6414572/1‑93 (MQ=255)
                        cggcgTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTa                                                                 <  1:3680911/93‑1 (MQ=255)
                          gcgTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAAc                                                               <  2:6942736/93‑1 (MQ=255)
                           cgTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAAcc                                                              <  1:4599357/93‑1 (MQ=255)
                           cgTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAAcc                                                              <  1:2062170/93‑1 (MQ=255)
                           cgTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAAcc                                                              >  2:6565032/1‑93 (MQ=255)
                           cgTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAAcc                                                              <  2:4874085/93‑1 (MQ=255)
                           cgTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGACGCCCGTTTTG‑ACCCCCTTTTGAATTTGCCGATTTAAcc                                                              >  1:9165450/1‑93 (MQ=255)
                            gTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAAccc                                                             <  2:7370620/93‑1 (MQ=255)
                             tGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCt                                                            <  2:3558776/93‑1 (MQ=255)
                             tGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCt                                                            >  1:215897/1‑93 (MQ=255)
                               aTTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGc                                                          <  2:2523698/93‑1 (MQ=255)
                                 tGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGa                                                        >  2:845991/1‑93 (MQ=255)
                                  ggCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTGAATTTGCCGATTTAACCCTGCGa                                                        >  1:1272848/1‑93 (MQ=255)
                                  ggCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGaa                                                       >  1:4086090/1‑93 (MQ=255)
                                    catcatCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATg                                                     <  2:3914017/93‑1 (MQ=255)
                                      tcatcaGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGa                                                   >  2:3283999/1‑93 (MQ=255)
                                      tcatcaGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGa                                                   >  2:8597700/1‑93 (MQ=255)
                                      tcatcaGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGa                                                   >  2:6074255/1‑93 (MQ=255)
                                      tcatcaGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGa                                                   >  1:309398/1‑93 (MQ=255)
                                       catcaGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGAt                                                  <  2:422471/93‑1 (MQ=255)
                                        atcaGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATa                                                 <  1:1810029/93‑1 (MQ=255)
                                         tcaGCGGAATTACGCTATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAg                                                >  1:9795715/1‑93 (MQ=255)
                                         tcaGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAg                                                >  1:1760800/1‑93 (MQ=255)
                                            gCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCct                                             <  2:2023441/93‑1 (MQ=255)
                                              ggAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCctct                                           <  2:4308644/93‑1 (MQ=255)
                                               gAATTACGCAATTACATGCTGGTGTATCTTTAGTCGCCGGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCtctc                                          <  2:6230682/93‑1 (MQ=255)
                                               gAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCctct                                           <  1:7271335/93‑1 (MQ=255)
                                               gAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCtctc                                          <  1:4780279/93‑1 (MQ=255)
                                                  ttACGCAATTACATGCTGGTGTTCCTTTAGTCGCCCGTTTTGCCCCCCCTTTTGAATTTGCCGATTTAACACTGCGCATGGCTAGCCTCTCgc                                        >  1:4509720/1‑92 (MQ=255)
                                                  ttACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGc                                       >  1:9385287/1‑93 (MQ=255)
                                                  ttACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGc                                       >  2:6683136/1‑93 (MQ=255)
                                                    aCGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCAt                                     >  1:8943956/1‑93 (MQ=255)
                                                       cAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTa                                  <  1:1965889/93‑1 (MQ=255)
                                                        aaTTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTAt                                 >  1:437972/1‑93 (MQ=255)
                                                         aTTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATg                                >  2:5712672/1‑93 (MQ=255)
                                                          ttACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATgg                               >  2:2335616/1‑93 (MQ=255)
                                                          ttACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATgg                               <  2:5560984/93‑1 (MQ=255)
                                                          ttACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCACCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATgg                               >  1:2900457/1‑93 (MQ=255)
                                                              aTGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCt                           >  2:8298060/1‑93 (MQ=255)
                                                              aTGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCt                           >  1:10011486/1‑93 (MQ=255)
                                                              aTGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCt                           <  2:7926401/93‑1 (MQ=255)
                                                                 cTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGt                        <  1:7037165/93‑1 (MQ=255)
                                                                 cTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGt                        >  1:2323794/1‑93 (MQ=255)
                                                                  tGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGtt                       <  1:608751/93‑1 (MQ=255)
                                                                  tGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGtt                       <  2:1657440/93‑1 (MQ=255)
                                                                   ggTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTa                      >  2:7710398/1‑93 (MQ=255)
                                                                   ggTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCAGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTa                      <  2:279914/93‑1 (MQ=255)
                                                                    gtgtAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTAt                     >  2:939586/1‑93 (MQ=255)
                                                                     tgtATCTTTAGTCGCCCGTTTTG‑CCCCCCTTTGTAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTAtc                    <  1:721677/93‑1 (MQ=255)
                                                                     tgtAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTAtc                    <  2:6361755/93‑1 (MQ=255)
                                                                     tgtAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTAtc                    <  2:8727719/93‑1 (MQ=255)
                                                                     tgtAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTAtc                    <  1:8667228/93‑1 (MQ=255)
                                                                        atcTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTcc                 <  2:5016143/91‑1 (MQ=255)
                                                                        aaCTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTcc                 >  1:4476075/1‑93 (MQ=255)
                                                                        aaCTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTcc                 >  2:7788284/1‑93 (MQ=255)
                                                                         aCTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCt                <  2:724917/93‑1 (MQ=255)
                                                                         aCTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCt                >  1:8109899/1‑93 (MQ=255)
                                                                         aCTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCt                <  2:1095705/93‑1 (MQ=255)
                                                                          cTTTAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCtt               <  1:5661839/93‑1 (MQ=255)
                                                                           tttAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTg              <  2:3402426/93‑1 (MQ=255)
                                                                            ttAGTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGc             <  1:8032552/93‑1 (MQ=255)
                                                                               gTCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCtgg          <  1:4985366/93‑1 (MQ=255)
                                                                                tCGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCtggt         >  1:4292111/1‑93 (MQ=255)
                                                                                 cGCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCtggtg        <  1:4921178/93‑1 (MQ=255)
                                                                                  gCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCtggtgg       <  1:5828762/93‑1 (MQ=255)
                                                                                  gCCCGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCtggtgg       <  2:1251744/93‑1 (MQ=255)
                                                                                   cccGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCtggtggt      <  2:685394/93‑1 (MQ=255)
                                                                                    ccGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCtggtggtg     >  1:8429667/1‑93 (MQ=255)
                                                                                     cGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCtggtggggg    >  1:7197584/1‑93 (MQ=255)
                                                                                     cGTTTTG‑CCCCCCTTTTGAATTTGCCGATTTAAACCTGCGAATGGATAGACTCTCGGCATTTCTGGTGCTGGTTCTCTCCTTGCtggtggtgt    >  1:4167600/1‑92 (MQ=255)
                                                                                       ttttG‑CCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGtt  >  1:7711518/1‑93 (MQ=255)
                                                                                            |                                                                                        
TTCCGGCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTT  >  NC_000913/2599939‑2600119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTA  >  NC_000913/2599944‑2600130
                                                                                             |                                                                                              
GCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCT                                                                                                >  SRR4302540.5857262/1‑94 (MQ=60)
GCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCT                                                                                                >  SRR4302540.9704262/1‑94 (MQ=60)
GCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCT                                                                                                <  SRR4302540.4581353/94‑1 (MQ=60)
  ATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCTTT                                                                                              >  SRR4302540.7752974/1‑94 (MQ=60)
  ATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCTTT                                                                                              >  SRR4302540.7495709/1‑94 (MQ=60)
  ATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCTTT                                                                                              >  SRR4302540.2079339/1‑94 (MQ=60)
  ATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTT                                                                                              >  SRR4302540.6378796/1‑94 (MQ=60)
  ATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTCGCCCCCCCTT                                                                                              >  SRR4302540.6378794/1‑94 (MQ=60)
    CATATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG                                                                                           >  SRR4302540.3497871/1‑94 (MQ=60)
     ACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑A                                                                                         >  SRR4302540.7560886/1‑94 (MQ=60)
      CATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AA                                                                                        >  SRR4302540.2044633/1‑94 (MQ=60)
      CATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AA                                                                                        >  SRR4302540.7277851/1‑94 (MQ=60)
       ATCGCTGGTGGGCGGCTTGATTTGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AAT                                                                                       <  SRR4302540.4179279/94‑1 (MQ=60)
       ATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AAT                                                                                       <  SRR4302540.4179281/94‑1 (MQ=60)
       ATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AAT                                                                                       <  SRR4302540.3804751/94‑1 (MQ=60)
       ATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AAT                                                                                       >  SRR4302540.9615258/1‑94 (MQ=60)
         CGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTTCATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTT                                                                                     <  SRR4302540.1065582/94‑1 (MQ=60)
         CGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTT                                                                                     <  SRR4302540.1504596/94‑1 (MQ=60)
         CGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTG                                                                                     >  SRR4302540.3616562/1‑94 (MQ=60)
          GCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTG                                                                                    >  SRR4302540.4007135/1‑94 (MQ=60)
           CTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGC                                                                                   >  SRR4302540.1795805/1‑94 (MQ=60)
           CTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGC                                                                                   >  SRR4302540.4626674/1‑94 (MQ=60)
           CTGGTGGGCGGCGTGATAGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGC                                                                                   >  SRR4302540.6685877/1‑94 (MQ=60)
            TGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTG‑AATTTGC                                                                                   >  SRR4302540.610007/1‑94 (MQ=60)
            GGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCC                                                                                  <  SRR4302540.1526709/94‑1 (MQ=60)
             GGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCG                                                                                 >  SRR4302540.7210162/1‑94 (MQ=60)
             GGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCG                                                                                 >  SRR4302540.6648004/1‑94 (MQ=60)
                GGGCTGCGTGATTTGCCTCATCAGCGTAATTACGCAATTCCCTGCTGTGGTACCTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATT                                                                              <  SRR4302540.2616180/94‑1 (MQ=37)
                GGGCGTCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTTTAACTTTAGTCGCCCGTTTTGCCCCCC‑‑TTTG‑AATTTGCCGATTT                                                                             <  SRR4302540.5403611/94‑1 (MQ=60)
                GGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATT                                                                              <  SRR4302540.3849144/94‑1 (MQ=60)
                GGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATT                                                                              <  SRR4302540.2616181/94‑1 (MQ=60)
                 GGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTT                                                                             <  SRR4302540.3724436/94‑1 (MQ=60)
                 GGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTT                                                                             <  SRR4302540.59935/94‑1 (MQ=60)
                  GCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTA                                                                            >  SRR4302540.6654423/1‑94 (MQ=60)
                  GCGGCGTGATTGGCATCATCAGCGGAATTACACAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTA                                                                            <  SRR4302540.5182958/94‑1 (MQ=60)
                   CGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAA                                                                           <  SRR4302540.3721145/94‑1 (MQ=60)
                    GGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAAC                                                                          <  SRR4302540.6850058/94‑1 (MQ=60)
                    GGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAAC                                                                          <  SRR4302540.2500613/94‑1 (MQ=60)
                    GGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAAC                                                                          <  SRR4302540.6661610/94‑1 (MQ=60)
                     GCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACC                                                                         <  SRR4302540.7833991/94‑1 (MQ=60)
                     GCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGACGCCCGTTTTG‑ACCCCCTTTTG‑AATTTGCCGATTTAACC                                                                         >  SRR4302540.9275424/1‑94 (MQ=60)
                      CGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCC                                                                        <  SRR4302540.4537542/94‑1 (MQ=60)
                      CGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCC                                                                        <  SRR4302540.4648796/94‑1 (MQ=60)
                      CGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCC                                                                        <  SRR4302540.2081730/94‑1 (MQ=60)
                      CGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCC                                                                        <  SRR4302540.2084360/94‑1 (MQ=60)
                      CGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTGTTG‑CTCCCCTTTTG‑AATTTGCCGATTTAACCT                                                                        >  SRR4302540.6177923/1‑94 (MQ=60)
                      CGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGCAACTTTAGTCGCCCGTTTTGCCCCCCC‑TTTG‑AATTTGCCGATCTAACCC                                                                        >  SRR4302540.5004649/1‑94 (MQ=60)
                       GTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCT                                                                       >  SRR4302540.6499105/1‑94 (MQ=60)
                       GTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCT                                                                       <  SRR4302540.9912812/94‑1 (MQ=60)
                       GTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCT                                                                       >  SRR4302540.218004/1‑94 (MQ=60)
                       GTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGGTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCT                                                                       >  SRR4302540.4215221/1‑94 (MQ=60)
                        TGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTG                                                                      >  SRR4302540.9286108/1‑94 (MQ=60)
                         GATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGC                                                                     <  SRR4302540.1354423/94‑1 (MQ=60)
                         GATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGC                                                                     >  SRR4302540.8413239/1‑94 (MQ=60)
                          ATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCG                                                                    <  SRR4302540.9149902/94‑1 (MQ=60)
                          ATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCG                                                                    <  SRR4302540.3062513/94‑1 (MQ=60)
                          ATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCG                                                                    <  SRR4302540.971653/94‑1 (MQ=60)
                            TGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGA                                                                   >  SRR4302540.1285959/1‑94 (MQ=60)
                            TGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGA                                                                   >  SRR4302540.8442914/1‑94 (MQ=60)
                            TGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAA                                                                  >  SRR4302540.4130157/1‑94 (MQ=60)
                            TGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAA                                                                  >  SRR4302540.3491016/1‑94 (MQ=60)
                             GGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAAT                                                                 <  SRR4302540.4690001/94‑1 (MQ=60)
                             GGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAAT                                                                 >  SRR4302540.7557512/1‑94 (MQ=60)
                              GCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATG                                                                <  SRR4302540.3626836/94‑1 (MQ=60)
                                ATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGG                                                               >  SRR4302540.4535032/1‑94 (MQ=60)
                                ATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGA                                                              >  SRR4302540.312466/1‑94 (MQ=60)
                                 TCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGAT                                                             >  SRR4302540.984637/1‑94 (MQ=60)
                                 TCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGAT                                                             <  SRR4302540.1109370/94‑1 (MQ=60)
                                 TCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGAT                                                             <  SRR4302540.8811222/94‑1 (MQ=60)
                                  CATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATA                                                            >  SRR4302540.9477506/1‑94 (MQ=60)
                                  CATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATA                                                            <  SRR4302540.4272839/94‑1 (MQ=60)
                                   ATCAGCGGAATTACGCTATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAG                                                           >  SRR4302540.9910446/1‑94 (MQ=60)
                                   ATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAG                                                           <  SRR4302540.1829766/94‑1 (MQ=60)
                                   ATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAG                                                           >  SRR4302540.1779900/1‑94 (MQ=60)
                                   ATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAG                                                           <  SRR4302540.7986765/94‑1 (MQ=60)
                                   ATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAG                                                           <  SRR4302540.4995181/94‑1 (MQ=60)
                                     CAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCC                                                         <  SRR4302540.4964658/94‑1 (MQ=60)
                                      AGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCT                                                        <  SRR4302540.4349351/94‑1 (MQ=60)
                                       GCGGAATTACGCAGTTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTC                                                       <  SRR4302540.2121186/94‑1 (MQ=60)
                                       GCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTC                                                       <  SRR4302540.9983947/94‑1 (MQ=60)
                                        CGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCT                                                      <  SRR4302540.604861/94‑1 (MQ=60)
                                        CGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCT                                                      <  SRR4302540.8160229/94‑1 (MQ=60)
                                        CGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCT                                                      >  SRR4302540.9984010/1‑94 (MQ=60)
                                        CGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCT                                                      >  SRR4302540.2339380/1‑94 (MQ=60)
                                        CGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCT                                                      >  SRR4302540.2953626/1‑94 (MQ=60)
                                          GAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTC                                                     <  SRR4302540.7352475/94‑1 (MQ=60)
                                          GAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCG                                                    >  SRR4302540.4381011/1‑94 (MQ=60)
                                          GAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCG                                                    <  SRR4302540.4831369/94‑1 (MQ=60)
                                          GAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTATCG                                                    >  SRR4302540.7380467/1‑94 (MQ=60)
                                           AATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATTGATAGCCTCTCGG                                                   >  SRR4302540.1981390/1‑94 (MQ=60)
                                            ATTACGCAATTACATGCTGGTGTTCCTTTAGTCGCCCGTTTTGCCCCCCCTTTTG‑AATTTGCCGATTTAACACTGCGCATGGCTAGCCTCTCGC                                                   >  SRR4302540.4558585/1‑94 (MQ=60)
                                            ATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGC                                                  >  SRR4302540.9496995/1‑94 (MQ=60)
                                            ATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGC                                                  >  SRR4302540.8668049/1‑94 (MQ=60)
                                            ATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCCAATGGATAGCCTCTCGGC                                                  >  SRR4302540.7666143/1‑94 (MQ=60)
                                             TTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCA                                                 <  SRR4302540.5124545/94‑1 (MQ=60)
                                             TTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCA                                                 <  SRR4302540.5124547/94‑1 (MQ=60)
                                             TTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGATTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCA                                                 >  SRR4302540.4870677/1‑94 (MQ=60)
                                              TACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTT‑AATTTGCCGATTTAACTCTGAGAATGGATAGCCTCTCcgcgt                                                >  SRR4302540.9049075/1‑89 (MQ=60)
                                              TACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCAT                                                <  SRR4302540.9253554/94‑1 (MQ=60)
                                              TACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCAT                                                <  SRR4302540.7328994/94‑1 (MQ=60)
                                              TACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCAT                                                >  SRR4302540.9049077/1‑94 (MQ=60)
                                                 GCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTA                                             >  SRR4302540.2695781/1‑94 (MQ=60)
                                                  CAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTAT                                            <  SRR4302540.1987239/94‑1 (MQ=60)
                                                  CAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTAT                                            >  SRR4302540.442623/1‑94 (MQ=60)
                                                  CAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTAT                                            <  SRR4302540.2652670/94‑1 (MQ=60)
                                                   AATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATG                                           >  SRR4302540.5894005/1‑94 (MQ=60)
                                                    ATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCACCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGG                                          >  SRR4302540.2932109/1‑94 (MQ=60)
                                                     TTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGT                                         <  SRR4302540.449769/94‑1 (MQ=60)
                                                     TTACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGT                                         <  SRR4302540.449767/94‑1 (MQ=60)
                                                       ACATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGC                                       >  SRR4302540.7403326/1‑94 (MQ=60)
                                                        CATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCT                                      >  SRR4302540.10128059/1‑94 (MQ=60)
                                                         ATGCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTG                                     >  SRR4302540.1985671/1‑94 (MQ=60)
                                                          TGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTG                                     >  SRR4302540.2281182/1‑94 (MQ=60)
                                                           GCTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGT                                   >  SRR4302540.2348815/1‑94 (MQ=60)
                                                            CTGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTT                                  <  SRR4302540.7115390/94‑1 (MQ=60)
                                                             TGGTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTA                                 <  SRR4302540.615259/94‑1 (MQ=60)
                                                               GTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATC                               >  SRR4302540.5878141/1‑94 (MQ=60)
                                                               GTGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATC                               >  SRR4302540.1455757/1‑94 (MQ=60)
                                                                TGTATCTTTAGTCGCCCGTTTTGCCCCCC‑‑TTTGTAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCT                              <  SRR4302540.729414/94‑1 (MQ=60)
                                                                TGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCT                              <  SRR4302540.6744172/94‑1 (MQ=60)
                                                                TGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCT                              <  SRR4302540.46671/94‑1 (MQ=60)
                                                                TGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCT                              >  SRR4302540.1731874/1‑94 (MQ=60)
                                                                TGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCT                              <  SRR4302540.8767907/94‑1 (MQ=60)
                                                                TGTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCT                              <  SRR4302540.729415/94‑1 (MQ=60)
                                                                 GTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTC                             >  SRR4302540.8576796/1‑94 (MQ=60)
                                                                 GTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTC                             >  SRR4302540.6802788/1‑94 (MQ=60)
                                                                 GTAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTC                             >  SRR4302540.8188968/1‑94 (MQ=60)
                                                                  TAACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCC                            >  SRR4302540.4524631/1‑94 (MQ=60)
                                                                   AACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCT                           <  SRR4302540.2007865/94‑1 (MQ=60)
                                                                   AACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCT                           >  SRR4302540.2115407/1‑94 (MQ=60)
                                                                   AACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCT                           <  SRR4302540.2020573/94‑1 (MQ=60)
                                                                   AACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCT                           >  SRR4302540.8204026/1‑94 (MQ=60)
                                                                   AACTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCT                           >  SRR4302540.1824265/1‑94 (MQ=60)
                                                                     CTTTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTG                         <  SRR4302540.5724184/94‑1 (MQ=60)
                                                                       TTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCT                       <  SRR4302540.8125938/94‑1 (MQ=60)
                                                                       TTAGTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCT                       <  SRR4302540.7556686/94‑1 (MQ=60)
                                                                          GTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGT                    >  SRR4302540.4338809/1‑94 (MQ=60)
                                                                          GTCGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGT                    <  SRR4302540.5039345/94‑1 (MQ=60)
                                                                            CGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGG                  <  SRR4302540.4974199/94‑1 (MQ=60)
                                                                            CGCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGG                  <  SRR4302540.5403683/94‑1 (MQ=60)
                                                                             GCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGT                 <  SRR4302540.5893201/94‑1 (MQ=60)
                                                                             GCCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGT                 <  SRR4302540.5893200/94‑1 (MQ=60)
                                                                              CCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTG                <  SRR4302540.9697018/94‑1 (MQ=60)
                                                                              CCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTG                >  SRR4302540.3636763/1‑94 (MQ=60)
                                                                              CCCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTG                >  SRR4302540.8527529/1‑94 (MQ=60)
                                                                               CCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGGGG               >  SRR4302540.7277815/1‑94 (MQ=60)
                                                                               CCGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAAACCTGCGAATGGATAGACTCTCGGCATTTCTGGTGCTGGTTCTCTCCTTGCTGGTGGTGT               >  SRR4302540.4212791/1‑94 (MQ=60)
                                                                                CGTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGT              >  SRR4302540.4195333/1‑94 (MQ=60)
                                                                                 GTTTTG‑CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTT             >  SRR4302540.7800224/1‑94 (MQ=60)
                                                                                  TTTTGCCCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTT             <  SRR4302540.720507/94‑1 (MQ=60)
                                                                                       GCCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTC        >  SRR4302540.6137615/1‑94 (MQ=60)
                                                                                       GCCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTC        >  SRR4302540.481351/1‑94 (MQ=60)
                                                                                        CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCT       <  SRR4302540.1463168/94‑1 (MQ=60)
                                                                                        CCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCT       <  SRR4302540.3409240/94‑1 (MQ=60)
                                                                                         CCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTC      >  SRR4302540.6518435/1‑94 (MQ=60)
                                                                                          CCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCT     <  SRR4302540.2519450/94‑1 (MQ=60)
                                                                                          CCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCT     >  SRR4302540.9297924/1‑94 (MQ=60)
                                                                                          CCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCT     >  SRR4302540.8485147/1‑94 (MQ=60)
                                                                                           CCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTC    >  SRR4302540.6344541/1‑94 (MQ=60)
                                                                                            CCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCT   <  SRR4302540.8991321/94‑1 (MQ=60)
                                                                                            CCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCT   >  SRR4302540.3346726/1‑94 (MQ=60)
                                                                                             CTTTTG‑AATTTGCCGGTTTAACCCTGCGAATGGATAGCGTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTA  >  SRR4302540.5223495/1‑94 (MQ=60)
                                                                                             CTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTA  >  SRR4302540.680442/1‑94 (MQ=60)
                                                                                             |                                                                                              
GCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTG‑AATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTA  >  NC_000913/2599944‑2600130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑