Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,621,188	A→G	Y42C (TAT→TGT)	ppk →	polyphosphate kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,621,188	0	A	G	100.0%	1032.2 / NA	312	Y42C (TAT→TGT)	ppk	polyphosphate kinase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (141/171); total (141/171)

Only 100 of 321 total aligned reads displayed.

TCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTATTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTC  >  NC_000913/2621098‑2621277

tCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGtt                                                                                         >  1:1211250/1‑93 (MQ=255)

 cacttGGTTATCGGTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTc                                                                                        <  2:4509465/90‑1 (MQ=255)

  aGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTcc                                                                                       <  1:3671131/93‑1 (MQ=255)

   gTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCa                                                                                      >  2:8236976/1‑93 (MQ=255)

    ttGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCaa                                                                                     >  2:377360/1‑93 (MQ=255)

     tGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAAt                                                                                    <  2:1125174/93‑1 (MQ=255)

     tGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAAt                                                                                    <  1:8944791/93‑1 (MQ=255)

      ggTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATa                                                                                   >  2:10007069/1‑93 (MQ=255)

       gTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATaa                                                                                  >  2:5912940/1‑93 (MQ=255)

        ttATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAAc                                                                                 >  2:9665299/1‑93 (MQ=255)

        ttATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAAc                                                                                 >  1:9252896/1‑93 (MQ=255)

         tATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAACGGAAGCGTTTCCTGGGGATCTGTTACAATAAcc                                                                                >  1:5643123/1‑93 (MQ=255)

          aTCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCt                                                                               <  2:1907565/93‑1 (MQ=255)

          aTCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCt                                                                               <  2:9523559/93‑1 (MQ=255)

            cGTTCAATGAACGCGTGCTTCAGNAAGCGGCGGACAAATCTAACCCGCTGATTGAAANGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtg                                                                             <  1:3895248/93‑1 (MQ=255)

            cGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtg                                                                             >  1:2784133/1‑93 (MQ=255)

            cGTTCAATGAACGCGTGCTACAGGAAGCGGCGGACAAATCAAACCCGCGGATTGAAAGGATGCTTTTCCTGGGGATCTGTGCCAATATCCTtg                                                                             <  2:8761420/93‑1 (MQ=255)

             gTTCAATGACCGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtga                                                                            <  1:5474833/93‑1 (MQ=255)

             gTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtga                                                                            >  1:8465378/1‑93 (MQ=255)

             gTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtga                                                                            >  1:6233766/1‑93 (MQ=255)

             gTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtga                                                                            <  1:3096068/93‑1 (MQ=255)

              ttCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtgat                                                                           <  1:4748978/93‑1 (MQ=255)

               tCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtgatg                                                                          <  1:6402713/93‑1 (MQ=255)

                  aTGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGt                                                                       >  1:3345726/1‑93 (MQ=255)

                   tGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGtt                                                                      >  1:2317157/1‑93 (MQ=255)

                    gAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTc                                                                     <  2:8598338/93‑1 (MQ=255)

                    gAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTc                                                                     <  2:3029611/93‑1 (MQ=255)

                     aaCGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCt                                                                    >  2:7052617/1‑93 (MQ=255)

                     aaCGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCt                                                                    >  2:1513559/1‑93 (MQ=255)

                     aaCGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCt                                                                    >  1:613984/1‑93 (MQ=255)

                     aaCGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCt                                                                    >  2:7919731/1‑93 (MQ=255)

                      aCGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCta                                                                   >  1:3953943/1‑93 (MQ=255)

                       cgcgTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCtat                                                                  <  2:4100976/93‑1 (MQ=255)

                       cgcgTGCTGCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCtat                                                                  <  2:2462052/93‑1 (MQ=255)

                        gcgTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCtata                                                                 <  2:3952908/93‑1 (MQ=255)

                        gcgTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCtata                                                                 <  2:1362909/93‑1 (MQ=255)

                         cgTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATaa                                                                <  1:172859/93‑1 (MQ=255)

                          gTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATaaa                                                               <  2:6828682/93‑1 (MQ=255)

                          gTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATaaa                                                               >  1:1045606/1‑93 (MQ=255)

                           tGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAg                                                              <  1:9658898/93‑1 (MQ=255)

                            gCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGt                                                             <  2:8948903/93‑1 (MQ=255)

                            gCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGt                                                             <  2:3571930/93‑1 (MQ=255)

                             cTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTc                                                            >  2:8649314/1‑93 (MQ=255)

                             cTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTc                                                            <  1:2643498/93‑1 (MQ=255)

                               tCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCg                                                          >  1:829167/1‑93 (MQ=255)

                                cAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGc                                                         <  1:3703638/93‑1 (MQ=255)

                                 aGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCt                                                        <  1:3131646/93‑1 (MQ=255)

                                  ggAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTGCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCtt                                                       >  1:2174784/1‑93 (MQ=255)

                                  ggAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCtt                                                       <  1:5805516/93‑1 (MQ=255)

                                     aGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGc                                                    >  2:8059029/1‑93 (MQ=255)

                                          cggACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaac                                               <  2:4849233/93‑1 (MQ=255)

                                          cggACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaac                                               >  2:5330020/1‑93 (MQ=255)

                                          cggACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaac                                               <  1:7457039/93‑1 (MQ=255)

                                            gACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaactg                                             >  1:9920714/1‑93 (MQ=255)

                                            gACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaactg                                             <  2:8180516/93‑1 (MQ=255)

                                            gACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaactg                                             >  1:665441/1‑93 (MQ=255)

                                            gACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaactg                                             >  1:7925157/1‑93 (MQ=255)

                                              cAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCTGCTTCGctgacatgaa                                           >  1:7412920/1‑93 (MQ=255)

                                              cAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaactgaa                                           >  2:9101968/1‑93 (MQ=255)

                                               aaaTCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAg                                          >  1:6050372/1‑93 (MQ=255)

                                               aaaTCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAg                                          <  1:4104369/93‑1 (MQ=255)

                                               aaaTCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAg                                          <  1:4440280/93‑1 (MQ=255)

                                                aaTCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGc                                         <  2:6243682/93‑1 (MQ=255)

                                                aaTCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGc                                         >  2:5282668/1‑93 (MQ=255)

                                                aaTCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGc                                         >  2:4321073/1‑93 (MQ=255)

                                                  tCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGa                                       <  1:2042002/93‑1 (MQ=255)

                                                      aCCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGca                                   >  1:9237496/1‑93 (MQ=255)

                                                       cccGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcat                                  <  2:2118795/93‑1 (MQ=255)

                                                       cccGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcat                                  >  2:8310056/1‑93 (MQ=255)

                                                         cGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcatca                                <  2:9258020/93‑1 (MQ=255)

                                                         cGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcatca                                >  2:6464958/1‑93 (MQ=255)

                                                          gCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcatcat                               >  1:7005399/1‑93 (MQ=255)

                                                            tGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCatta                             >  1:2971375/1‑93 (MQ=255)

                                                                tGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAg                         >  2:4026118/1‑93 (MQ=255)

                                                                 gAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGc                        >  2:3726794/1‑93 (MQ=255)

                                                                 gAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGc                        >  2:7400474/1‑93 (MQ=255)

                                                                   aaGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCga                      >  1:6806073/1‑93 (MQ=255)

                                                                   aaGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCga                      <  2:5669619/93‑1 (MQ=255)

                                                                     ggATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCgaag                    <  1:1423424/93‑1 (MQ=255)

                                                                      gATGCGTTTTCTGGGGATCTGTTCCAATAACCTTGATTAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCgaaga                   <  2:8509564/93‑1 (MQ=255)

                                                                      gATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCgaaga                   <  1:1111564/93‑1 (MQ=255)

                                                                      gATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCgaaga                   <  2:7647136/93‑1 (MQ=255)

                                                                       aTGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCgaagaa                  >  2:1617227/1‑93 (MQ=255)

                                                                        tGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCgaagaaa                 >  1:8061055/1‑92 (MQ=255)

                                                                        tGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAc                 >  2:6423346/1‑93 (MQ=255)

                                                                        tGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAc                 >  2:2817186/1‑93 (MQ=255)

                                                                        tGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAc                 <  2:2302136/93‑1 (MQ=255)

                                                                        tGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAc                 >  1:857414/1‑93 (MQ=255)

                                                                          cGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACaa               <  1:5046255/93‑1 (MQ=255)

                                                                           gTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAg              <  1:2451208/93‑1 (MQ=255)

                                                                            tttCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAgg             >  1:480850/1‑93 (MQ=255)

                                                                                cTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTGCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTcc         <  1:6473132/93‑1 (MQ=255)

                                                                                 tGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCa        <  2:4981299/93‑1 (MQ=255)

                                                                                  ggggATCTGTTCCAATAACCTTGATGAGTGCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCaa       <  1:9123101/93‑1 (MQ=255)

                                                                                    ggATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAAct     >  1:428481/1‑93 (MQ=255)

                                                                                    ggATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAAct     >  2:3389057/1‑93 (MQ=255)

                                                                                     gATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAActc    <  2:6564840/93‑1 (MQ=255)

                                                                                     gATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAActc    <  2:2685852/93‑1 (MQ=255)

                                                                                       tCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACtctc  >  2:3843983/1‑93 (MQ=255)

                                                                                       tCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACtctc  >  1:1889738/1‑93 (MQ=255)

TCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTATTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTC  >  NC_000913/2621098‑2621277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCTCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTATTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATTC  >  NC_000913/2621096‑2621281

GCTCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGT                                                                                              >  SRR4302540.4384790/1‑94 (MQ=60)

 CTCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTT                                                                                             >  SRR4302540.1223669/1‑94 (MQ=60)

  ttggtttgttatcgttcgatgtagccgttCTTCACGAAGCGACGGCCAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTC                                                                                            <  SRR4302540.3299021/65‑1 (MQ=60)

  TCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTC                                                                                            <  SRR4302540.3299022/94‑1 (MQ=60)

    AGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCA                                                                                          >  SRR4302540.9795385/1‑94 (MQ=60)

    AGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCA                                                                                          <  SRR4302540.3711286/94‑1 (MQ=60)

    AGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAAACCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCA                                                                                          >  SRR4302540.9213974/1‑94 (MQ=60)

      TTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAAT                                                                                        <  SRR4302540.9358254/94‑1 (MQ=60)

       TGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATA                                                                                       <  SRR4302540.9049964/94‑1 (MQ=60)

       TGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATA                                                                                       <  SRR4302540.1277232/94‑1 (MQ=60)

        GGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTTACCCGCTGATTGTAAGGATGCGATTCCTGGCGACCTTGTCCAATAA                                                                                      >  SRR4302540.9246321/1‑94 (MQ=60)

        GGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAA                                                                                      <  SRR4302540.1613259/94‑1 (MQ=60)

        GGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGCTCCAATAA                                                                                      >  SRR4302540.9062543/1‑94 (MQ=60)

         GTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAAC                                                                                     >  SRR4302540.9363642/1‑94 (MQ=60)

         GTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAAC                                                                                     >  SRR4302540.3152829/1‑94 (MQ=60)

         GTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAAC                                                                                     >  SRR4302540.2633458/1‑94 (MQ=60)

          TTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAACGGAAGCGTTTCCTGGGGATCTGTTACAATAACC                                                                                    >  SRR4302540.5705232/1‑94 (MQ=60)

          TTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACC                                                                                    <  SRR4302540.9245633/94‑1 (MQ=60)

           TATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCT                                                                                   >  SRR4302540.3376112/1‑94 (MQ=60)

             TCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTG                                                                                 >  SRR4302540.2814207/1‑94 (MQ=60)

             TCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTG                                                                                 <  SRR4302540.4566421/94‑1 (MQ=60)

              CGTTCAATGAACGCGTGCTTCAGNAAGCGGCGGACAAATCTAACCCGCTGATTGAAANGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGA                                                                                <  SRR4302540.3937527/94‑1 (MQ=60)

              CGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGA                                                                                >  SRR4302540.8563664/1‑94 (MQ=60)

              CGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGA                                                                                >  SRR4302540.6303094/1‑94 (MQ=60)

               GTTCAATGACCGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGAT                                                                               <  SRR4302540.5535095/94‑1 (MQ=60)

               GTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGAT                                                                               <  SRR4302540.3130004/94‑1 (MQ=60)

                TTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTACCCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATG                                                                              <  SRR4302540.427047/94‑1 (MQ=60)

                TTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATG                                                                              <  SRR4302540.4799658/94‑1 (MQ=60)

                 TCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGA                                                                             <  SRR4302540.6473983/94‑1 (MQ=60)

                 TAAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAAACCGCTTATTGAAAGGCTGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGA                                                                             <  SRR4302540.2798844/94‑1 (MQ=60)

                  CAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAG                                                                            <  SRR4302540.5719767/94‑1 (MQ=60)

                  CAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAG                                                                            >  SRR4302540.6990242/1‑94 (MQ=60)

                   AATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGT                                                                           >  SRR4302540.3382429/1‑94 (MQ=60)

                    ATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTT                                                                          >  SRR4302540.2342104/1‑94 (MQ=60)

                    ATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTT                                                                          >  SRR4302540.1213535/1‑94 (MQ=60)

                    ATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTT                                                                          >  SRR4302540.1832643/1‑94 (MQ=60)

                     TGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTC                                                                         <  SRR4302540.618978/94‑1 (MQ=60)

                      GAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCT                                                                        >  SRR4302540.620535/1‑94 (MQ=60)

                       AACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTA                                                                       >  SRR4302540.3996618/1‑94 (MQ=60)

                        ACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTAT                                                                      <  SRR4302540.1998461/94‑1 (MQ=60)

                         CGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATA                                                                     >  SRR4302540.952889/1‑94 (MQ=60)

                          GCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAA                                                                    >  SRR4302540.7829984/1‑94 (MQ=60)

                          GCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAA                                                                    <  SRR4302540.1114921/94‑1 (MQ=60)

                           CGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAA                                                                   <  SRR4302540.174583/94‑1 (MQ=60)

                           CGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAA                                                                   <  SRR4302540.314169/94‑1 (MQ=60)

                           CGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAA                                                                   >  SRR4302540.1056234/1‑94 (MQ=60)

                            GTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAG                                                                  >  SRR4302540.8659394/1‑94 (MQ=60)

                            GTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAG                                                                  <  SRR4302540.3962588/94‑1 (MQ=60)

                            GTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAG                                                                  <  SRR4302540.6432309/94‑1 (MQ=60)

                            GTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAG                                                                  >  SRR4302540.1278844/1‑94 (MQ=60)

                             TGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGT                                                                 >  SRR4302540.4095426/1‑94 (MQ=60)

                             TGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGT                                                                 >  SRR4302540.4095427/1‑94 (MQ=60)

                             TGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGT                                                                 <  SRR4302540.9772597/94‑1 (MQ=60)

                              GCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTC                                                                <  SRR4302540.6612006/94‑1 (MQ=60)

                              GCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTC                                                                <  SRR4302540.6612008/94‑1 (MQ=60)

                               CTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCC                                                               <  SRR4302540.7457757/94‑1 (MQ=60)

                               CTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCC                                                               <  SRR4302540.2672175/94‑1 (MQ=60)

                               CTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCC                                                               <  SRR4302540.5622811/94‑1 (MQ=60)

                                TTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCG                                                              <  SRR4302540.2223178/94‑1 (MQ=60)

                                TTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCG                                                              >  SRR4302540.837982/1‑94 (MQ=60)

                                 TCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGC                                                             <  SRR4302540.3833662/94‑1 (MQ=60)

                                 TCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGC                                                             >  SRR4302540.3838157/1‑94 (MQ=60)

                                  CAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCT                                                            <  SRR4302540.3744072/94‑1 (MQ=60)

                                  CAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCT                                                            <  SRR4302540.6309672/94‑1 (MQ=60)

                                  CAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCT                                                            <  SRR4302540.2895289/94‑1 (MQ=60)

                                   AGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTGCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTT                                                           >  SRR4302540.2198239/1‑94 (MQ=60)

                                   AGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTT                                                           >  SRR4302540.3938325/1‑94 (MQ=60)

                                   AGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTT                                                           <  SRR4302540.3165820/94‑1 (MQ=60)

                                   AGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTT                                                           <  SRR4302540.5023632/94‑1 (MQ=60)

                                    GGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTC                                                          <  SRR4302540.5869667/94‑1 (MQ=60)

                                    GGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTC                                                          <  SRR4302540.6758553/94‑1 (MQ=60)

                                       AGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGGTTCGCT                                                       >  SRR4302540.7608634/1‑94 (MQ=60)

                                         CGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGA                                                     <  SRR4302540.653467/94‑1 (MQ=60)

                                          GGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAA                                                    <  SRR4302540.6183060/94‑1 (MQ=60)

                                          GGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAA                                                    <  SRR4302540.2988940/94‑1 (MQ=60)

                                            CGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACT                                                  <  SRR4302540.7540179/94‑1 (MQ=60)

                                            CGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACT                                                  <  SRR4302540.33170/94‑1 (MQ=60)

                                             GGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTG                                                 >  SRR4302540.7639214/1‑94 (MQ=60)

                                             GGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTG                                                 >  SRR4302540.672578/1‑94 (MQ=60)

                                             GGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTG                                                 >  SRR4302540.7908766/1‑94 (MQ=60)

                                             GGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTG                                                 >  SRR4302540.10036564/1‑94 (MQ=60)

                                             GGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTG                                                 <  SRR4302540.2110925/94‑1 (MQ=60)

                                             GGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTG                                                 >  SRR4302540.2683798/1‑94 (MQ=60)

                                             GGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTG                                                 >  SRR4302540.8017532/1‑94 (MQ=60)

                                             GGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTA                                                 >  SRR4302540.1090061/1‑94 (MQ=60)

                                              GACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGA                                                <  SRR4302540.10098648/94‑1 (MQ=60)

                                               ACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCTGCTTCGCTGACATGAA                                               >  SRR4302540.7495485/1‑94 (MQ=60)

                                                CAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAG                                              <  SRR4302540.8030599/94‑1 (MQ=60)

                                                CAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAG                                              >  SRR4302540.6117614/1‑94 (MQ=60)

                                                CAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAG                                              <  SRR4302540.2451666/94‑1 (MQ=60)

                                                 AAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGC                                             <  SRR4302540.4488397/94‑1 (MQ=60)

                                                 AAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGC                                             <  SRR4302540.4148646/94‑1 (MQ=60)

                                                 AAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGC                                             <  SRR4302540.3077618/94‑1 (MQ=60)

                                                  AATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCG                                            <  SRR4302540.1926917/94‑1 (MQ=60)

                                                  AATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCG                                            <  SRR4302540.1852499/94‑1 (MQ=60)

                                                   ATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGA                                           >  SRR4302540.8529202/1‑94 (MQ=60)

                                                   ATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGA                                           <  SRR4302540.365497/94‑1 (MQ=60)

                                                    TCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGAC                                          <  SRR4302540.6240120/94‑1 (MQ=60)

                                                    TCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGAC                                          <  SRR4302540.2064004/94‑1 (MQ=60)

                                                    TCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGAC                                          <  SRR4302540.6230109/94‑1 (MQ=60)

                                                     CTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACG                                         <  SRR4302540.2263102/94‑1 (MQ=60)

                                                      TAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGC                                        <  SRR4302540.4301020/94‑1 (MQ=60)

                                                      TAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGC                                        >  SRR4302540.4427907/1‑94 (MQ=60)

                                                       AACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCTGCTTCGCTGAACTGAAGCGACGCA                                       >  SRR4302540.5655412/1‑94 (MQ=60)

                                                       AACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCA                                       >  SRR4302540.9348164/1‑94 (MQ=60)

                                                         CCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATC                                     <  SRR4302540.7508188/94‑1 (MQ=60)

                                                         CCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATC                                     <  SRR4302540.7508189/94‑1 (MQ=60)

                                                           CGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCAT                                   >  SRR4302540.7083141/1‑94 (MQ=60)

                                                           CGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCAT                                   >  SRR4302540.6511377/1‑94 (MQ=60)

                                                           CGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCAT                                   >  SRR4302540.4123625/1‑94 (MQ=60)

                                                           CGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCAT                                   >  SRR4302540.4650688/1‑94 (MQ=60)

                                                            GCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCGTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATT                                  <  SRR4302540.2461360/94‑1 (MQ=60)

                                                             CTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTA                                 >  SRR4302540.3004193/1‑94 (MQ=60)

                                                             CTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTA                                 <  SRR4302540.8725454/94‑1 (MQ=60)

                                                              TGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATACCCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTAT                                <  SRR4302540.8064705/94‑1 (MQ=60)

                                                              TGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTAT                                >  SRR4302540.5151973/1‑94 (MQ=60)

                                                               GATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATT                               >  SRR4302540.8235233/1‑94 (MQ=60)

                                                                ATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTA                              <  SRR4302540.4951280/94‑1 (MQ=60)

                                                                 TTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAG                             >  SRR4302540.7025212/1‑94 (MQ=60)

                                                                  TGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGC                            <  SRR4302540.2559483/94‑1 (MQ=60)

                                                                  TGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGC                            <  SRR4302540.2549311/94‑1 (MQ=60)

                                                                  TGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGC                            <  SRR4302540.8857505/94‑1 (MQ=60)

                                                                    AAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGA                          >  SRR4302540.6881385/1‑94 (MQ=60)

                                                                     AAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAA                         <  SRR4302540.6818386/94‑1 (MQ=60)

                                                                     AAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAA                         <  SRR4302540.2144693/94‑1 (MQ=60)

                                                                      AGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAG                        <  SRR4302540.1168781/94‑1 (MQ=60)

                                                                      AGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAG                        >  SRR4302540.7286499/1‑94 (MQ=60)

                                                                       GGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGA                       <  SRR4302540.1438831/94‑1 (MQ=60)

                                                                       GGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGA                       <  SRR4302540.10085641/94‑1 (MQ=60)

                                                                        GATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAA                      <  SRR4302540.1123073/94‑1 (MQ=60)

                                                                        GATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAA                      <  SRR4302540.4443012/94‑1 (MQ=60)

                                                                         ATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAC                     <  SRR4302540.4824139/94‑1 (MQ=60)

                                                                         ATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAC                     <  SRR4302540.6669495/94‑1 (MQ=60)

                                                                         ATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAC                     >  SRR4302540.866521/1‑94 (MQ=60)

                                                                         ATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAC                     <  SRR4302540.8557270/94‑1 (MQ=60)

                                                                         ATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAA                     >  SRR4302540.8154629/1‑94 (MQ=60)

                                                                         ATGCGTTTCCTGGGGATCTGTTCCAATAACCGTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAC                     <  SRR4302540.4824138/94‑1 (MQ=60)

                                                                          agacgTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACA                    <  SRR4302540.9584353/89‑1 (MQ=60)

                                                                          TGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACA                    <  SRR4302540.8292556/94‑1 (MQ=60)

                                                                           GCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAA                   <  SRR4302540.9358729/94‑1 (MQ=60)

                                                                            CGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAG                  <  SRR4302540.5100828/94‑1 (MQ=60)

                                                                            CGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAG                  <  SRR4302540.9704721/94‑1 (MQ=60)

                                                                            CGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAG                  <  SRR4302540.3079364/94‑1 (MQ=60)

                                                                             GTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGACGCGACGCATCATTATTAGCGAAGAACAAGG                 >  SRR4302540.486003/1‑94 (MQ=60)

                                                                             GTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGG                 <  SRR4302540.2477601/94‑1 (MQ=60)

                                                                             GTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGG                 >  SRR4302540.486004/1‑94 (MQ=60)

                                                                               TTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCT               <  SRR4302540.8600828/94‑1 (MQ=60)

                                                                                 CCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAACGCTCC             >  SRR4302540.5844159/1‑94 (MQ=60)

                                                                                  CTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTGCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCA            <  SRR4302540.6545156/94‑1 (MQ=60)

                                                                                  CTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCA            >  SRR4302540.9591563/1‑94 (MQ=60)

                                                                                    GGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAAC          <  SRR4302540.3564400/94‑1 (MQ=60)

                                                                                    GGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAAC          >  SRR4302540.5530404/1‑94 (MQ=60)

                                                                                    GGGGATCTGTTCCAATAACCTTGATGAGTGCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAAC          <  SRR4302540.9232763/94‑1 (MQ=60)

                                                                                     GGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACT         >  SRR4302540.432986/1‑94 (MQ=60)

                                                                                     GGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACT         >  SRR4302540.865126/1‑94 (MQ=60)

                                                                                      GGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTC        >  SRR4302540.1567812/1‑94 (MQ=60)

                                                                                       GATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTTCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTGT       >  SRR4302540.10021891/1‑94 (MQ=60)

                                                                                       GATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCT       >  SRR4302540.3731675/1‑94 (MQ=60)

                                                                                       GATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCT       >  SRR4302540.6067619/1‑94 (MQ=60)

                                                                                       GATCTGTTCCAATAACCTTGATGAGTTCTAAAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTCGCGAAGAACAAGGCTCCAACTCT       >  SRR4302540.6067616/1‑94 (MQ=60)

                                                                                        ATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTC      >  SRR4302540.1910423/1‑94 (MQ=60)

                                                                                        ATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTC      >  SRR4302540.1759387/1‑94 (MQ=60)

                                                                                        ATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTC      >  SRR4302540.3730601/1‑94 (MQ=60)

                                                                                         TCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCA     <  SRR4302540.6052776/94‑1 (MQ=60)

                                                                                          CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT    <  SRR4302540.9544674/94‑1 (MQ=60)

                                                                                          CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT    >  SRR4302540.8432809/1‑94 (MQ=60)

                                                                                          CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT    <  SRR4302540.1764355/94‑1 (MQ=60)

                                                                                          CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT    >  SRR4302540.9095278/1‑94 (MQ=60)

                                                                                          CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT    <  SRR4302540.8932217/94‑1 (MQ=60)

                                                                                          CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT    <  SRR4302540.8932215/94‑1 (MQ=60)

                                                                                          CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT    <  SRR4302540.8270456/94‑1 (MQ=60)

                                                                                          CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT    <  SRR4302540.5831519/94‑1 (MQ=60)

                                                                                          CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT    <  SRR4302540.5831787/94‑1 (MQ=60)

                                                                                           TGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATT   <  SRR4302540.8057812/94‑1 (MQ=60)

                                                                                           TGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATT   <  SRR4302540.7967136/94‑1 (MQ=60)

                                                                                           TGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATT   >  SRR4302540.5126852/1‑94 (MQ=60)

                                                                                            GTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATTC  >  SRR4302540.8100997/1‑94 (MQ=60)

                                                                                            GTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATTC  >  SRR4302540.9872805/1‑94 (MQ=60)

GCTCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTATTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATTC  >  NC_000913/2621096‑2621281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`