Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,621,188 |
A→G |
Y42C (TAT→TGT) |
ppk → |
polyphosphate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,621,188 | 0 | A | G | 100.0%
| 602.5
/ NA
| 184 | Y42C (TAT→TGT) | ppk | polyphosphate kinase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (86/98); total (86/98) |
Only 100 of 188 total aligned reads displayed.
TCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTATTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTC > NC_000913/2621098‑2621277
|
tCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGtt > 2:3377643/1‑93 (MQ=255)
tCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGtt < 2:1210803/93‑1 (MQ=255)
aGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTcc > 1:3914278/1‑93 (MQ=255)
gTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCa > 2:525637/1‑93 (MQ=255)
ttGGTTATCGTTCAATGAACACGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGAATGAAAGGATGCGTTTCCTGGGGATCTGTTCCaa > 2:6064518/1‑93 (MQ=255)
tGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAAt < 1:2438684/93‑1 (MQ=255)
tgTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATa < 1:5301575/92‑1 (MQ=255)
ggTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATa > 1:3042063/1‑93 (MQ=255)
gTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATaa < 1:1917889/93‑1 (MQ=255)
tATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAAcc > 1:3351663/1‑93 (MQ=255)
tATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAAcc < 2:1669822/93‑1 (MQ=255)
tATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGAGTTTCCTGGGGATCTGTTCCAATAAcc > 1:6025353/1‑93 (MQ=255)
aTCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCt > 1:1201236/1‑93 (MQ=255)
aTCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCt < 2:2148534/93‑1 (MQ=255)
tCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCtt < 1:329989/93‑1 (MQ=255)
tCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCtt > 1:109351/1‑93 (MQ=255)
tCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCtt > 1:5501390/1‑93 (MQ=255)
cGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtg > 1:2962442/1‑93 (MQ=255)
gTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtga < 2:5391031/93‑1 (MQ=255)
ttCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtgat > 2:6040623/1‑93 (MQ=255)
ttCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtgat > 2:4550062/1‑93 (MQ=255)
ttCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGGTTCCTGGGGATCTGTTCCAATAACCTtgat > 2:28400/1‑93 (MQ=255)
cAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTtgatga < 2:2380996/93‑1 (MQ=255)
aTGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGt < 1:3438003/93‑1 (MQ=255)
aTGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGt > 1:2747012/1‑93 (MQ=255)
gAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTc < 2:3362867/93‑1 (MQ=255)
gAACGCGTCGTTCATGAAGCGGCGGACGAATCTAACCCGCTGATTGAAACGATGCGTTTCCTCGCGATCTGATCCAACAACCTTGATGGGTTc > 2:2037771/1‑93 (MQ=255)
aaCGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCt > 2:2614530/1‑93 (MQ=255)
aCGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCta > 2:4589648/1‑93 (MQ=255)
gcgTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCtata < 2:2505024/93‑1 (MQ=255)
gcgTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCtata < 1:1018838/93‑1 (MQ=255)
gcgTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCtata < 1:4792987/93‑1 (MQ=255)
gcgTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCtata < 1:373315/93‑1 (MQ=255)
gTGCTTCAGGAAGCGGCGGATAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATaaa < 1:1510603/93‑1 (MQ=255)
gTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATaaa < 1:28147/93‑1 (MQ=255)
tGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAg < 2:3809156/93‑1 (MQ=255)
tGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAg > 1:1362813/1‑93 (MQ=255)
gCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGt > 1:1050840/1‑93 (MQ=255)
ttCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTcc < 1:4827478/93‑1 (MQ=255)
ttCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTcc < 1:567684/93‑1 (MQ=255)
ttCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTcc < 2:4005171/93‑1 (MQ=255)
tCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCg > 1:228597/1‑93 (MQ=255)
cAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGc > 2:2913226/1‑93 (MQ=255)
cAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGc < 1:6104322/93‑1 (MQ=255)
aGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCt < 1:5925689/93‑1 (MQ=255)
aGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCt < 2:3269218/93‑1 (MQ=255)
aGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCt < 1:2910615/93‑1 (MQ=255)
aGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCt > 2:4462787/1‑93 (MQ=255)
ggAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCtt > 2:3504032/1‑93 (MQ=255)
ggAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCtt > 1:482325/1‑93 (MQ=255)
gAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTc < 1:5830841/93‑1 (MQ=255)
gAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTc < 1:788422/93‑1 (MQ=255)
aGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGc < 2:3586315/93‑1 (MQ=255)
aGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGc < 2:4302962/93‑1 (MQ=255)
gcggcgGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGct < 1:5367188/93‑1 (MQ=255)
cggcggACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctg < 1:5206483/93‑1 (MQ=255)
cggACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaac < 2:1287644/93‑1 (MQ=255)
ggACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaact < 2:3884075/93‑1 (MQ=255)
gACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaactg > 2:441435/1‑93 (MQ=255)
aCAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaactga < 1:1708689/93‑1 (MQ=255)
cAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaactgaa < 1:1784780/93‑1 (MQ=255)
cAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaactgaa < 1:1674931/93‑1 (MQ=255)
cAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGctgaactgaa > 2:301928/1‑93 (MQ=255)
aaTCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGc > 2:495790/1‑93 (MQ=255)
aaTCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGc > 1:2600251/1‑93 (MQ=255)
aaTCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGc > 1:5027447/1‑93 (MQ=255)
aaTCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGc < 2:3063395/93‑1 (MQ=255)
tCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGa < 2:63019/93‑1 (MQ=255)
tCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGa > 2:3131701/1‑93 (MQ=255)
tCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGa < 1:4617902/93‑1 (MQ=255)
cTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGAc > 1:3760230/1‑93 (MQ=255)
agcccGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGc < 1:5592875/91‑1 (MQ=255)
aaCCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGc < 2:204154/93‑1 (MQ=255)
cccGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcat > 1:733/1‑93 (MQ=255)
ccGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcatc < 2:4734634/93‑1 (MQ=255)
ccGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcatc < 2:5044919/93‑1 (MQ=255)
cGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcatca < 1:3845381/93‑1 (MQ=255)
gCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcatcat < 2:797344/93‑1 (MQ=255)
gCTGATTGAAAGGATGCGTTTCCTGGGGATCCGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGcatcat > 1:3165609/1‑93 (MQ=255)
gATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCattat > 2:1587160/1‑93 (MQ=255)
gATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCattat > 2:4689324/1‑93 (MQ=255)
ttGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCAttatta > 1:4642917/1‑93 (MQ=255)
ttGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCAttatta < 2:682855/93‑1 (MQ=255)
aGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCgaa > 2:715829/1‑93 (MQ=255)
gATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCgaaga > 2:955308/1‑93 (MQ=255)
gATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCgaaga < 2:4844443/93‑1 (MQ=255)
gATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCgaaga < 1:2104596/93‑1 (MQ=255)
tGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAc < 2:2085754/93‑1 (MQ=255)
gCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACa < 1:3782353/93‑1 (MQ=255)
tttCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAgg > 1:1132839/1‑93 (MQ=255)
ttCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGc < 2:1847465/93‑1 (MQ=255)
ccTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTc > 2:1197608/1‑93 (MQ=255)
cTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTcc > 1:5740543/1‑93 (MQ=255)
gggATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAAc < 2:5863955/93‑1 (MQ=255)
gggATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAAc > 2:1181024/1‑93 (MQ=255)
ggATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAAct > 2:547701/1‑93 (MQ=255)
gATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAActc < 2:1064053/93‑1 (MQ=255)
aTCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAActct < 2:5631243/93‑1 (MQ=255)
tCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACtctc > 2:3297717/1‑93 (MQ=255)
tCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACtctc > 1:4293344/1‑93 (MQ=255)
|
TCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTATTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTC > NC_000913/2621098‑2621277
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCTCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTATTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATTC > NC_000913/2621095‑2621281
|
AGCTCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTG < SRR4302533.5272668/94‑1 (MQ=60)
CAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCC > SRR4302533.3395366/1‑94 (MQ=60)
CAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCC > SRR4302533.3764136/1‑94 (MQ=60)
CAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCC > SRR4302533.3938188/1‑94 (MQ=60)
CAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCC > SRR4302533.4844826/1‑94 (MQ=60)
CAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCC > SRR4302533.5933520/1‑94 (MQ=60)
CAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCC > SRR4302533.5307815/1‑94 (MQ=60)
GTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAA > SRR4302533.1103080/1‑94 (MQ=60)
TGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATA < SRR4302533.2453744/94‑1 (MQ=60)
TGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATA > SRR4302533.5665298/1‑94 (MQ=60)
TGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATA > SRR4302533.3060684/1‑94 (MQ=60)
TGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAA < SRR4302533.5333337/94‑1 (MQ=60)
TGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAA < SRR4302533.1196955/94‑1 (MQ=60)
GGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAA > SRR4302533.1441253/1‑94 (MQ=60)
GGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAA > SRR4302533.2487181/1‑94 (MQ=60)
GTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAAC < SRR4302533.1929598/94‑1 (MQ=60)
TTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACC < SRR4302533.4664553/94‑1 (MQ=60)
TTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACC > SRR4302533.3372367/1‑94 (MQ=60)
TTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGAGTTTCCTGGGGATCTGTTCCAATAACC > SRR4302533.6061864/1‑94 (MQ=60)
TATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCT > SRR4302533.1208453/1‑94 (MQ=60)
ATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTT > SRR4302533.5534576/1‑94 (MQ=60)
ATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTT > SRR4302533.6022067/1‑94 (MQ=60)
ATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTT > SRR4302533.110046/1‑94 (MQ=60)
ATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTT > SRR4302533.1070303/1‑94 (MQ=60)
TCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTG > SRR4302533.2980552/1‑94 (MQ=60)
TCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTG < SRR4302533.332004/94‑1 (MQ=60)
GTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGAT > SRR4302533.3843260/1‑94 (MQ=60)
GTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGAT > SRR4302533.1691949/1‑94 (MQ=60)
TCAATGAACGCGTGCTTAAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGA < SRR4302533.867964/94‑1 (MQ=60)
AATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGT > SRR4302533.2763853/1‑94 (MQ=60)
ATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTT > SRR4302533.766537/1‑94 (MQ=60)
ATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTT < SRR4302533.3459236/94‑1 (MQ=60)
CGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATA > SRR4302533.3703655/1‑94 (MQ=60)
GCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAA < SRR4302533.4822027/94‑1 (MQ=60)
GCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAA < SRR4302533.1024827/94‑1 (MQ=60)
GCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAA < SRR4302533.375571/94‑1 (MQ=60)
GTGCTTCAGGAAGCGGCGGATAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAG < SRR4302533.1519707/94‑1 (MQ=60)
GTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAG < SRR4302533.28338/94‑1 (MQ=60)
GTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAG > SRR4302533.1371000/1‑94 (MQ=60)
GTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAG < SRR4302533.3371720/94‑1 (MQ=60)
TGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGT > SRR4302533.1057023/1‑94 (MQ=60)
CTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCC > SRR4302533.5094687/1‑94 (MQ=60)
CTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCC < SRR4302533.4309341/94‑1 (MQ=60)
TTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCG > SRR4302533.230016/1‑94 (MQ=60)
TTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCG < SRR4302533.571044/94‑1 (MQ=60)
TTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCG < SRR4302533.4856733/94‑1 (MQ=60)
CAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCT < SRR4302533.6141168/94‑1 (MQ=60)
AGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTT > SRR4302533.485207/1‑94 (MQ=60)
AGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTT < SRR4302533.2928484/94‑1 (MQ=60)
AGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTT < SRR4302533.5961511/94‑1 (MQ=60)
GAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCG < SRR4302533.5866079/94‑1 (MQ=60)
GAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCG < SRR4302533.793056/94‑1 (MQ=60)
GCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTG < SRR4302533.5399429/94‑1 (MQ=60)
CGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGA < SRR4302533.5237852/94‑1 (MQ=60)
CGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGA > SRR4302533.5475342/1‑94 (MQ=60)
GGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAA > SRR4302533.2207257/1‑94 (MQ=60)
CGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACT < SRR4302533.2101962/94‑1 (MQ=60)
ACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAA < SRR4302533.1719041/94‑1 (MQ=60)
CAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAG < SRR4302533.1862289/94‑1 (MQ=60)
CAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAG > SRR4302533.3313264/1‑94 (MQ=60)
CAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAG < SRR4302533.2935895/94‑1 (MQ=60)
CAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAG < SRR4302533.1795633/94‑1 (MQ=60)
CAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAG < SRR4302533.1685073/94‑1 (MQ=60)
AAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGC > SRR4302533.2616229/1‑94 (MQ=60)
AAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGC > SRR4302533.5057890/1‑94 (MQ=60)
AATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCG < SRR4302533.158081/94‑1 (MQ=60)
AATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCG < SRR4302533.4715669/94‑1 (MQ=60)
TCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGAC < SRR4302533.4645889/94‑1 (MQ=60)
TCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGAC > SRR4302533.3783279/1‑94 (MQ=60)
AGCCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCA < SRR4302533.5626663/94‑1 (MQ=60)
ACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCAT > SRR4302533.739/1‑94 (MQ=60)
ACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCAT < SRR4302533.2772915/94‑1 (MQ=60)
CGCTGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCAT < SRR4302533.3868866/94‑1 (MQ=60)
CGCTGATTGAAAGGATGCGTTTCCTGGGGATCCGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCAT > SRR4302533.3185089/1‑94 (MQ=60)
TGATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTAT > SRR4302533.5540934/1‑94 (MQ=60)
GATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATT > SRR4302533.2664203/1‑94 (MQ=60)
ATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTA > SRR4302533.4671046/1‑94 (MQ=60)
ATTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTA < SRR4302533.6131465/94‑1 (MQ=60)
TTGAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAG > SRR4302533.2990475/1‑94 (MQ=60)
GAAAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCG < SRR4302533.3912803/94‑1 (MQ=60)
AAGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAA > SRR4302533.2418036/1‑94 (MQ=60)
AGGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAG < SRR4302533.5858444/94‑1 (MQ=60)
GGATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGA > SRR4302533.5044135/1‑94 (MQ=60)
GATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAA < SRR4302533.2117569/94‑1 (MQ=60)
ATGCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAAC < SRR4302533.683076/94‑1 (MQ=60)
GCGTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAA < SRR4302533.3805518/94‑1 (MQ=60)
GTTTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGG > SRR4302533.1139573/1‑94 (MQ=60)
TTCCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCT < SRR4302533.4336499/94‑1 (MQ=60)
CCTGGGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCC > SRR4302533.5775184/1‑94 (MQ=60)
GGGATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACT < SRR4302533.5364997/94‑1 (MQ=60)
GATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCT > SRR4302533.3118459/1‑94 (MQ=60)
ATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTC > SRR4302533.1238448/1‑94 (MQ=60)
ATCTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTC > SRR4302533.4319166/1‑94 (MQ=60)
CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT > SRR4302533.5830922/1‑94 (MQ=60)
CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT > SRR4302533.2891123/1‑94 (MQ=60)
CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT < SRR4302533.3736336/94‑1 (MQ=60)
CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT < SRR4302533.1761675/94‑1 (MQ=60)
CTGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCAT > SRR4302533.5225767/1‑94 (MQ=60)
TGTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATT > SRR4302533.5196831/1‑94 (MQ=60)
GTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATTC < SRR4302533.4761775/94‑1 (MQ=60)
GTTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATTC < SRR4302533.2866180/94‑1 (MQ=60)
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AGCTCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTATTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATTC > NC_000913/2621095‑2621281
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
