Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,647,298 T→C T1004A (ACG→GCG)  b2520 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,647,2980TC99.3% 949.8 / ‑3.6 299T1004A (ACG→GCG) b2520hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (2/0);  new base C (158/139);  total (160/139)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01

Only 100 of 314 total aligned reads displayed.

CACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCG  >  NC_000913/2647208‑2647387
                                                                                          |                                                                                         
cACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGccc                                                                                         >  2:650152/1‑93 (MQ=255)
cACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGccc                                                                                         >  2:6968769/1‑93 (MQ=255)
cACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGccc                                                                                         >  2:7855644/1‑93 (MQ=255)
 aCTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCa                                                                                        >  2:5870443/1‑93 (MQ=255)
  cTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAg                                                                                       >  2:9740158/1‑93 (MQ=255)
  cTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAg                                                                                       >  1:8395677/1‑93 (MQ=255)
   tCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAgg                                                                                      >  1:3994297/1‑93 (MQ=255)
     gCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTATCGAAGTCATCTGCCGCCCAGGCt                                                                                    >  2:6927904/1‑93 (MQ=255)
     gCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCt                                                                                    <  1:2537560/93‑1 (MQ=255)
     gCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCt                                                                                    >  2:1916019/1‑93 (MQ=255)
     gCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCt                                                                                    <  1:2169820/93‑1 (MQ=255)
       cATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTg                                                                                  <  2:8491376/93‑1 (MQ=255)
       cATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTg                                                                                  <  2:628496/93‑1 (MQ=255)
       cATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTg                                                                                  >  2:2944231/1‑93 (MQ=255)
       cATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTg                                                                                  >  2:3792951/1‑93 (MQ=255)
       cATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTg                                                                                  <  2:4064519/93‑1 (MQ=255)
        aTAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTgc                                                                                 >  1:6981484/1‑93 (MQ=255)
        aTAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTgc                                                                                 <  2:5286794/93‑1 (MQ=255)
        aTAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTgc                                                                                 >  2:8925912/1‑93 (MQ=255)
           aaGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGcc                                                                              <  1:8845425/93‑1 (MQ=255)
           aaGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGcc                                                                              >  1:4687413/1‑93 (MQ=255)
               gcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGa                                                                          <  2:1323923/93‑1 (MQ=255)
               gcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGa                                                                          <  1:8546069/93‑1 (MQ=255)
                cgGCATGTTCAGTTCAGCATGCACCGGTGTGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAc                                                                         <  2:7424705/93‑1 (MQ=255)
                 ggCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAcg                                                                        <  1:5728465/93‑1 (MQ=255)
                  gCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAcgc                                                                       >  2:9223184/1‑93 (MQ=255)
                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCa                                                                    >  2:7954523/1‑93 (MQ=255)
                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCa                                                                    >  1:4276742/1‑93 (MQ=255)
                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCa                                                                    >  1:9545862/1‑93 (MQ=255)
                      gttcagttcaGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCaa                                                                   >  2:4741259/1‑93 (MQ=255)
                      gttcagttcaGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCaa                                                                   >  2:2229562/1‑93 (MQ=255)
                       ttcagttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAt                                                                  <  2:4853223/93‑1 (MQ=255)
                       ttcagttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAt                                                                  <  2:3622325/93‑1 (MQ=255)
                       ttcagttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAt                                                                  <  2:9472051/93‑1 (MQ=255)
                       ttcagttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAt                                                                  <  1:3804693/93‑1 (MQ=255)
                        tcagttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAtt                                                                 <  1:8099697/93‑1 (MQ=255)
                            ttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCAcc                                                             >  1:5564254/1‑93 (MQ=255)
                             tcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCg                                                            >  1:4961165/1‑93 (MQ=255)
                              cagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGt                                                           <  2:9830350/93‑1 (MQ=255)
                                gCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTa                                                         >  1:4709089/1‑93 (MQ=255)
                                 cAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaa                                                        <  1:2769881/93‑1 (MQ=255)
                                   aTCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaaaa                                                      >  1:8722509/1‑93 (MQ=255)
                                   aTCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaaaa                                                      >  1:6626282/1‑93 (MQ=255)
                                    tCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCCATTCACCGTTAAAAt                                                     >  2:5487391/1‑93 (MQ=255)
                                    tCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAAt                                                     <  1:9174875/93‑1 (MQ=255)
                                    tCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAAt                                                     >  1:1782546/1‑93 (MQ=255)
                                    tCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAAt                                                     >  2:2659442/1‑93 (MQ=255)
                                       ccGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCTCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGc                                                  <  1:6285602/93‑1 (MQ=255)
                                       ccGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGc                                                  >  1:6057987/1‑93 (MQ=255)
                                         ggTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCGATGACGCGCAATTCACCGTTAAAATCGCCa                                                <  1:301249/93‑1 (MQ=255)
                                         ggTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCa                                                <  1:7353226/93‑1 (MQ=255)
                                         ggTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCa                                                <  2:6165854/93‑1 (MQ=255)
                                               gCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGc                                          <  1:3902235/93‑1 (MQ=255)
                                                 aaCTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAg                                        >  1:1621968/1‑93 (MQ=255)
                                                  aCTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgt                                       >  2:8735560/1‑93 (MQ=255)
                                                   cTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgtg                                      >  2:567563/1‑93 (MQ=255)
                                                    tATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgtgt                                     >  2:4896840/1‑93 (MQ=255)
                                                    tATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgtgt                                     >  2:1515024/1‑93 (MQ=255)
                                                     aTCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTa                                    >  2:5025956/1‑93 (MQ=255)
                                                      tCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTaa                                   <  2:3977679/93‑1 (MQ=255)
                                                       cACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAc                                  >  2:3109307/1‑93 (MQ=255)
                                                        cctttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAcc                                 <  2:2067857/92‑1 (MQ=255)
                                                          tttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGa                               >  2:10018700/1‑93 (MQ=255)
                                                           ttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAg                              >  2:6645509/1‑93 (MQ=255)
                                                              ctttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCt                           <  1:10014241/93‑1 (MQ=255)
                                                               tttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCtt                          >  1:5870463/1‑93 (MQ=255)
                                                               tttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCtt                          >  1:3253365/1‑93 (MQ=255)
                                                                    ttGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGccc                     >  2:2481262/1‑93 (MQ=255)
                                                                    ttGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGccc                     >  1:9424284/1‑93 (MQ=255)
                                                                    ttGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGccc                     >  2:5139371/1‑93 (MQ=255)
                                                                    ttGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGccc                     >  1:7757346/1‑93 (MQ=255)
                                                                    ttGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGccc                     >  2:8255263/1‑93 (MQ=255)
                                                                    ttGCGACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGccc                     <  1:9890539/93‑1 (MQ=255)
                                                                     tGCTTCCGAAGTCATCTGACGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTACCCGAGCCTTCGCCCt                    <  2:4761108/93‑1 (MQ=255)
                                                                      gCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTg                   <  2:768058/93‑1 (MQ=255)
                                                                      gCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTg                   >  1:4383997/1‑93 (MQ=255)
                                                                       cTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGt                  >  1:4883695/1‑93 (MQ=255)
                                                                        tACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGtt                 <  2:4560591/93‑1 (MQ=255)
                                                                        tACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGtt                 >  1:3510605/1‑93 (MQ=255)
                                                                         aCCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATTGCCAATCGGCAGTGTAACCGCGCCTTCGCCCTGTTc                >  1:7175338/1‑93 (MQ=255)
                                                                           cGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGt              <  1:1974442/93‑1 (MQ=255)
                                                                            gAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGtt             >  2:8064226/1‑93 (MQ=255)
                                                                            gAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGtt             >  1:8570560/1‑93 (MQ=255)
                                                                            gAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGtt             >  2:1184922/1‑93 (MQ=255)
                                                                             aaGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTg            >  2:4182629/1‑93 (MQ=255)
                                                                             aaGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTg            <  2:1450296/93‑1 (MQ=255)
                                                                              aGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTgg           >  1:4153955/1‑92 (MQ=255)
                                                                               gTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAg          >  1:6891830/1‑93 (MQ=255)
                                                                                tCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGc         <  1:1133128/93‑1 (MQ=255)
                                                                                tCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGc         >  1:6389992/1‑93 (MQ=255)
                                                                                 cATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCg        <  2:9299381/93‑1 (MQ=255)
                                                                                  aTCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGt       >  1:529009/1‑93 (MQ=255)
                                                                                  aTCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGt       <  1:9722820/93‑1 (MQ=255)
                                                                                  aTCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGt       <  1:6741516/93‑1 (MQ=255)
                                                                                  aTCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGt       >  2:7211949/1‑93 (MQ=255)
                                                                                     tGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAc    <  2:1953571/93‑1 (MQ=255)
                                                                                     tGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAc    <  2:3224022/93‑1 (MQ=255)
                                                                                     tGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAc    <  2:3272993/93‑1 (MQ=255)
                                                                                     tGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGACCGTTAc    >  1:3195854/1‑93 (MQ=255)
                                                                                       ccGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCg  <  1:1232743/93‑1 (MQ=255)
                                                                                          |                                                                                         
CACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCG  >  NC_000913/2647208‑2647387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCA  >  NC_000913/2647206‑2647390
                                                                                            |                                                                                            
nnncnccncnATAAAGCNCGNNNNGTTCAGTTCAGCAATCACCGGTGNGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCC                                                                                             <  SRR4302540.7374717/84‑1 (MQ=60)
GCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCC                                                                                             <  SRR4302540.2689922/94‑1 (MQ=60)
   CCTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAG                                                                                          <  SRR4302540.9464450/94‑1 (MQ=60)
   CCTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAG                                                                                          <  SRR4302540.2712818/94‑1 (MQ=60)
   ACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAG                                                                                          >  SRR4302540.5914397/1‑94 (MQ=60)
   ACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAG                                                                                          >  SRR4302540.8493104/1‑94 (MQ=60)
   ACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCAGCCGCCCAG                                                                                          <  SRR4302540.2661711/94‑1 (MQ=60)
    CTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGG                                                                                         >  SRR4302540.4037283/1‑94 (MQ=60)
    CTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGG                                                                                         <  SRR4302540.2060560/94‑1 (MQ=60)
     TCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGC                                                                                        <  SRR4302540.1068536/94‑1 (MQ=60)
     TCGCCATAAAGCGCGGCATGTTCAGTTCAACAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGC                                                                                        <  SRR4302540.183774/94‑1 (MQ=60)
      CGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCT                                                                                       <  SRR4302540.5736877/94‑1 (MQ=60)
       GCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTT                                                                                      <  SRR4302540.2564926/94‑1 (MQ=60)
       GCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTT                                                                                      <  SRR4302540.2193222/94‑1 (MQ=60)
       GCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTT                                                                                      >  SRR4302540.4185818/1‑94 (MQ=60)
        CCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTG                                                                                     >  SRR4302540.5902584/1‑94 (MQ=60)
         CATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGC                                                                                    >  SRR4302540.9181838/1‑94 (MQ=60)
         CATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGC                                                                                    <  SRR4302540.7148463/94‑1 (MQ=60)
         CATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGC                                                                                    >  SRR4302540.150040/1‑94 (MQ=60)
         CATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGC                                                                                    >  SRR4302540.7059033/1‑94 (MQ=60)
         CATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGC                                                                                    <  SRR4302540.4007016/94‑1 (MQ=60)
          ATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCG                                                                                   >  SRR4302540.3989877/1‑94 (MQ=60)
          ATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCC                                                                                   >  SRR4302540.8799410/1‑94 (MQ=60)
           TAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGC                                                                                  >  SRR4302540.7361721/1‑94 (MQ=60)
           TAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGC                                                                                  >  SRR4302540.3451396/1‑94 (MQ=60)
            AAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCC                                                                                 >  SRR4302540.1921229/1‑94 (MQ=60)
            AAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCC                                                                                 >  SRR4302540.4737543/1‑94 (MQ=60)
             AAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCA                                                                                <  SRR4302540.8947746/94‑1 (MQ=60)
               GCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATG                                                                              <  SRR4302540.2451542/94‑1 (MQ=60)
                 GCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAC                                                                            <  SRR4302540.4147992/94‑1 (MQ=60)
                 GCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAC                                                                            <  SRR4302540.4819916/94‑1 (MQ=60)
                 GCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAC                                                                            <  SRR4302540.3957869/94‑1 (MQ=60)
                 GCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAC                                                                            <  SRR4302540.8645356/94‑1 (MQ=60)
                  CGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACG                                                                           >  SRR4302540.5545518/1‑94 (MQ=60)
                   GGCATGTTGAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGC                                                                          <  SRR4302540.8551495/94‑1 (MQ=60)
                   GGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGC                                                                          <  SRR4302540.8017826/94‑1 (MQ=60)
                   GGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGC                                                                          <  SRR4302540.5791549/94‑1 (MQ=60)
                    GCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCG                                                                         <  SRR4302540.6013606/94‑1 (MQ=60)
                    GCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCG                                                                         <  SRR4302540.3819210/94‑1 (MQ=60)
                      ATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCA                                                                       >  SRR4302540.1243635/1‑94 (MQ=60)
                      ATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCA                                                                       >  SRR4302540.4323258/1‑94 (MQ=60)
                      ATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCA                                                                       >  SRR4302540.9658801/1‑94 (MQ=60)
                       TGTTCAGTTCAGCAATCCCCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAA                                                                      <  SRR4302540.4819213/94‑1 (MQ=60)
                        GTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAT                                                                     <  SRR4302540.7336226/94‑1 (MQ=60)
                        GTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAT                                                                     <  SRR4302540.5420909/94‑1 (MQ=60)
                         TTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATT                                                                    <  SRR4302540.3846134/94‑1 (MQ=60)
                         TTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATT                                                                    <  SRR4302540.6414304/94‑1 (MQ=60)
                          TCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTC                                                                   <  SRR4302540.8193703/94‑1 (MQ=60)
                          TCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTC                                                                   <  SRR4302540.7721474/94‑1 (MQ=60)
                            AGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCAC                                                                 >  SRR4302540.8828750/1‑94 (MQ=60)
                            AGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCAC                                                                 <  SRR4302540.6486795/94‑1 (MQ=60)
                             GTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACC                                                                >  SRR4302540.6604781/1‑94 (MQ=60)
                             GTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACC                                                                >  SRR4302540.5625527/1‑94 (MQ=60)
                             GTTCAGCAATCACCGGCGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACC                                                                >  SRR4302540.3912428/1‑94 (MQ=60)
                             GTGCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACC                                                                <  SRR4302540.3285192/94‑1 (MQ=60)
                              TTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCG                                                               >  SRR4302540.5014806/1‑94 (MQ=60)
                              TTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCG                                                               >  SRR4302540.8321503/1‑94 (MQ=60)
                              TTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCG                                                               <  SRR4302540.887847/94‑1 (MQ=60)
                               TCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGT                                                              >  SRR4302540.1767105/1‑94 (MQ=60)
                               TCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGT                                                              >  SRR4302540.4263390/1‑94 (MQ=60)
                               TCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGT                                                              <  SRR4302540.10031474/94‑1 (MQ=60)
                                 AGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTA                                                            >  SRR4302540.4759414/1‑94 (MQ=60)
                                   CAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAA                                                          <  SRR4302540.3106786/94‑1 (MQ=60)
                                   CAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAA                                                          <  SRR4302540.2799813/94‑1 (MQ=60)
                                    AATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAA                                                         >  SRR4302540.8823791/1‑94 (MQ=60)
                                    AATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAA                                                         <  SRR4302540.1476800/94‑1 (MQ=60)
                                    AATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAA                                                         >  SRR4302540.6699641/1‑94 (MQ=60)
                                     ATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAAT                                                        >  SRR4302540.1801909/1‑94 (MQ=60)
                                      TCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATC                                                       >  SRR4302540.6773870/1‑94 (MQ=60)
                                      TCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATC                                                       <  SRR4302540.9284926/94‑1 (MQ=60)
                                      TCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATC                                                       >  SRR4302540.2911055/1‑94 (MQ=60)
                                        ACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGC                                                     >  SRR4302540.6125318/1‑94 (MQ=60)
                                         CCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCTCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCC                                                    <  SRR4302540.6355557/94‑1 (MQ=60)
                                          CGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTTACCGTTAAAATCGCCA                                                   >  SRR4302540.4405213/1‑94 (MQ=60)
                                          CGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCA                                                   >  SRR4302540.6037668/1‑94 (MQ=60)
                                           GGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCGATGACGCGCAATTCACCGTTAAAATCGCCAA                                                  <  SRR4302540.304235/94‑1 (MQ=60)
                                           GGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCGATGACGCGCAATTCACCGTTAAAATCGCCAA                                                  <  SRR4302540.304234/94‑1 (MQ=60)
                                           GGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAA                                                  <  SRR4302540.7435242/94‑1 (MQ=60)
                                            GTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAAT                                                 <  SRR4302540.3534024/94‑1 (MQ=60)
                                             TGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATC                                                <  SRR4302540.2435867/94‑1 (MQ=60)
                                              GCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCG                                               >  SRR4302540.8636538/1‑94 (MQ=60)
                                               CGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGG                                              <  SRR4302540.948931/94‑1 (MQ=60)
                                                 GCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCA                                            <  SRR4302540.3944565/94‑1 (MQ=60)
                                                  CAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAG                                           >  SRR4302540.1639747/1‑94 (MQ=60)
                                                  CAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAG                                           >  SRR4302540.10099283/1‑94 (MQ=60)
                                                   AACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGT                                          <  SRR4302540.4971212/94‑1 (MQ=60)
                                                   AACTATCACTTTACTTTCGTTGCTACCGAAGTCATCAGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGT                                          <  SRR4302540.4971213/94‑1 (MQ=60)
                                                    ACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTG                                         >  SRR4302540.701052/1‑94 (MQ=60)
                                                     CTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGT                                        <  SRR4302540.8332783/94‑1 (MQ=60)
                                                     CTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGT                                        >  SRR4302540.9729416/1‑94 (MQ=60)
                                                       ATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAA                                      >  SRR4302540.4654903/1‑94 (MQ=60)
                                                        TCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAC                                     >  SRR4302540.5073123/1‑94 (MQ=60)
                                                        TCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAC                                     <  SRR4302540.3022630/94‑1 (MQ=60)
                                                         CACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACC                                    <  SRR4302540.7116291/94‑1 (MQ=60)
                                                         CACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACC                                    >  SRR4302540.6985490/1‑94 (MQ=60)
                                                           CTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGA                                  <  SRR4302540.9033823/94‑1 (MQ=60)
                                                           CTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGA                                  >  SRR4302540.2652837/1‑94 (MQ=60)
                                                            TTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAG                                 <  SRR4302540.4373218/94‑1 (MQ=60)
                                                                CTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTT                             <  SRR4302540.10130825/94‑1 (MQ=60)
                                                                CTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTT                             >  SRR4302540.5935352/1‑94 (MQ=60)
                                                                CTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTT                             <  SRR4302540.6386635/94‑1 (MQ=60)
                                                                CTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTT                             >  SRR4302540.3288825/1‑94 (MQ=60)
                                                                 TTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTC                            <  SRR4302540.207604/94‑1 (MQ=60)
                                                                 TTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTC                            >  SRR4302540.9740050/1‑94 (MQ=60)
                                                                 TTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTC                            <  SRR4302540.4614472/94‑1 (MQ=60)
                                                                  TTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCG                           <  SRR4302540.6878932/94‑1 (MQ=60)
                                                                    CGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCC                         >  SRR4302540.5717096/1‑94 (MQ=60)
                                                                    CGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCC                         >  SRR4302540.3590643/1‑94 (MQ=60)
                                                                     GTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCC                        >  SRR4302540.7847991/1‑94 (MQ=60)
                                                                     GTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCC                        >  SRR4302540.9536274/1‑94 (MQ=60)
                                                                     GTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCC                        >  SRR4302540.8665950/1‑94 (MQ=60)
                                                                      TTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCT                       <  SRR4302540.8050775/94‑1 (MQ=60)
                                                                      TTGCGACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCT                       <  SRR4302540.10006019/94‑1 (MQ=60)
                                                                       TGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTG                      >  SRR4302540.4431597/1‑94 (MQ=60)
                                                                        GCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGT                     >  SRR4302540.4936153/1‑94 (MQ=60)
                                                                         CTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTT                    >  SRR4302540.3548842/1‑94 (MQ=60)
                                                                          TACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATTGCCAATCGGCAGTGTAACCGCGCCTTCGCCCTGTTC                   >  SRR4302540.7255321/1‑94 (MQ=60)
                                                                          TACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTC                   <  SRR4302540.9549851/94‑1 (MQ=60)
                                                                           TCCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCG                  <  SRR4302540.953402/94‑1 (MQ=60)
                                                                           ACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCG                  >  SRR4302540.4746140/1‑94 (MQ=60)
                                                                           ACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCG                  <  SRR4302540.1669009/94‑1 (MQ=60)
                                                                            CCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGT                 <  SRR4302540.7712522/94‑1 (MQ=60)
                                                                            CCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGT                 >  SRR4302540.9121010/1‑94 (MQ=60)
                                                                             CGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTT                <  SRR4302540.1995870/94‑1 (MQ=60)
                                                                             CGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTT                >  SRR4302540.1182948/1‑94 (MQ=60)
                                                                             CGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTT                >  SRR4302540.8670129/1‑94 (MQ=60)
                                                                             CGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTT                >  SRR4302540.8670128/1‑94 (MQ=60)
                                                                             CGAAGTCATCCGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCTCCCTGTTCGTT                <  SRR4302540.2074111/94‑1 (MQ=60)
                                                                              GAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTG               >  SRR4302540.5158679/1‑94 (MQ=60)
                                                                              GAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTG               <  SRR4302540.6857297/94‑1 (MQ=60)
                                                                              GAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTG               >  SRR4302540.868819/1‑94 (MQ=60)
                                                                              GAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTG               >  SRR4302540.3253179/1‑94 (MQ=60)
                                                                               AAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGG              >  SRR4302540.4198952/1‑94 (MQ=60)
                                                                               AAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGA              >  SRR4302540.6329247/1‑94 (MQ=60)
                                                                                AGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAG             >  SRR4302540.6968275/1‑94 (MQ=60)
                                                                                 GTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGC            >  SRR4302540.6461123/1‑94 (MQ=60)
                                                                                  TCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCG           >  SRR4302540.4282833/1‑94 (MQ=60)
                                                                                  TCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCG           <  SRR4302540.1144933/94‑1 (MQ=60)
                                                                                   CATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGT          <  SRR4302540.4740960/94‑1 (MQ=60)
                                                                                   CATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGT          >  SRR4302540.7556135/1‑94 (MQ=60)
                                                                                   CATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGT          >  SRR4302540.534727/1‑94 (MQ=60)
                                                                                    ATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGCGCGTC         >  SRR4302540.6350069/1‑94 (MQ=60)
                                                                                    ATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTT         <  SRR4302540.9837032/94‑1 (MQ=60)
                                                                                    ATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTT         >  SRR4302540.4985029/1‑94 (MQ=60)
                                                                                    ATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTT         >  SRR4302540.6421679/1‑94 (MQ=60)
                                                                                    ATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTT         <  SRR4302540.6815996/94‑1 (MQ=60)
                                                                                     TCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTA        <  SRR4302540.6704228/94‑1 (MQ=60)
                                                                                      CTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAC       >  SRR4302540.9903968/1‑94 (MQ=60)
                                                                                      CTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGACCGTTAC       >  SRR4302540.3230562/1‑94 (MQ=60)
                                                                                      CTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCACCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAC       >  SRR4302540.9903969/1‑94 (MQ=60)
                                                                                       TGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTAGCCCTGTTCGTTGAGCGTTACC      >  SRR4302540.1109307/1‑94 (MQ=60)
                                                                                        GCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCG     <  SRR4302540.3872825/94‑1 (MQ=60)
                                                                                         CCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGG    <  SRR4302540.1245330/94‑1 (MQ=60)
                                                                                         CCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGG    >  SRR4302540.635063/1‑94 (MQ=60)
                                                                                          CGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGC   <  SRR4302540.1852520/94‑1 (MQ=60)
                                                                                          CGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGC   <  SRR4302540.3592514/94‑1 (MQ=60)
                                                                                          CGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGC   >  SRR4302540.781590/1‑94 (MQ=60)
                                                                                          CGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGC   >  SRR4302540.6168734/1‑94 (MQ=60)
                                                                                          CGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGC   >  SRR4302540.6168733/1‑94 (MQ=60)
                                                                                          CGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAAGCGCCAATCGGCAGTGTAACCGAGCCTTGGCCGTGTTCGTTGAGCGTTACCGGC   <  SRR4302540.3592515/94‑1 (MQ=60)
                                                                                           GCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCA  <  SRR4302540.4032179/94‑1 (MQ=60)
                                                                                           GCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCA  <  SRR4302540.4573273/94‑1 (MQ=60)
                                                                                           GCCCAGGCGTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCA  <  SRR4302540.4245848/94‑1 (MQ=60)
                                                                                            |                                                                                            
GCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCA  >  NC_000913/2647206‑2647390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑