Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,666,143	A→G	I258I (ATT→ATC)	hcaR ←	HcaR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,666,143	0	A	G	100.0%	1114.1 / NA	340	I258I (ATT→ATC)	hcaR	HcaR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/226); total (114/226)

Only 100 of 351 total aligned reads displayed.

CTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCAT  >  NC_000913/2666053‑2666232

cTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGAt                                                                                         <  2:1023357/93‑1 (MQ=255)

cTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATC‑CCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATg                                                                                        >  1:4878126/1‑93 (MQ=255)

 tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATg                                                                                        <  1:4389295/93‑1 (MQ=255)

  gCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATgg                                                                                       <  2:4453692/93‑1 (MQ=255)

   cacaATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATggg                                                                                      <  1:1986561/93‑1 (MQ=255)

    acaATGGCGATGAGATCGCGTAGTGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGCTGGGa                                                                                     <  1:8965372/93‑1 (MQ=255)

     caATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGAc                                                                                    <  1:9767532/93‑1 (MQ=255)

      aaTGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACg                                                                                   >  2:2281490/1‑93 (MQ=255)

       aTGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGa                                                                                  <  1:1243420/93‑1 (MQ=255)

       aTGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGa                                                                                  >  2:9598525/1‑93 (MQ=255)

        tGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGaa                                                                                 <  2:6544211/93‑1 (MQ=255)

        tGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGaa                                                                                 >  2:5559203/1‑93 (MQ=255)

        tGGCGATGAAATCGCATAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGaa                                                                                 <  1:6503460/93‑1 (MQ=255)

         ggCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGaaa                                                                                <  2:6788218/93‑1 (MQ=255)

          gCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGaaaa                                                                               >  1:6067070/1‑93 (MQ=255)

             aTGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAaaca                                                                            <  1:8158703/93‑1 (MQ=255)

              tGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAaacaa                                                                           <  1:711102/93‑1 (MQ=255)

               gAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAaacaac                                                                          <  2:5081336/93‑1 (MQ=255)

                aaaTCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAAcc                                                                         <  1:8032342/93‑1 (MQ=255)

                aaaTCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAAcc                                                                         <  1:28746/93‑1 (MQ=255)

                 aaTCGCGTAAATCCGGCTTCCACCCCCCTTTCCTCCCCGCCATCAGGAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCt                                                                        <  1:2686813/93‑1 (MQ=255)

                  aTCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTg                                                                       <  2:9390416/93‑1 (MQ=255)

                     gcgTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTcc                                                                    >  2:7736072/1‑93 (MQ=255)

                        tAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCgga                                                                 >  1:9296286/1‑92 (MQ=255)

                        tAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGt                                                                 <  1:1492853/93‑1 (MQ=255)

                        tAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGt                                                                 <  2:4276449/93‑1 (MQ=255)

                        tAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGt                                                                 <  2:9506901/93‑1 (MQ=255)

                          aTGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTAt                                                               >  1:7392239/1‑93 (MQ=255)

                           tGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTGCGGCGATGGGACGAAAAACAACCTGTCCGGTAtt                                                              >  2:742193/1‑93 (MQ=255)

                           tGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTAtt                                                              <  1:4300308/93‑1 (MQ=255)

                             ccGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTaa                                                            >  1:5052492/1‑93 (MQ=255)

                                gCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAat                                                         <  2:1663015/93‑1 (MQ=255)

                                 cTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAatt                                                        <  2:6028276/93‑1 (MQ=255)

                                 cTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAatt                                                        <  1:5455016/93‑1 (MQ=255)

                                  ttCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAatta                                                       >  2:7224971/1‑93 (MQ=255)

                                  ttCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAatta                                                       <  1:8788156/93‑1 (MQ=255)

                                   tCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAattat                                                      <  2:5313480/93‑1 (MQ=255)

                                      tctcCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCa                                                   >  2:2902095/1‑93 (MQ=255)

                                       ctcCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCat                                                  <  2:1246109/93‑1 (MQ=255)

                                       ctcCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCat                                                  <  1:7644347/93‑1 (MQ=255)

                                        tcCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCata                                                 <  1:1604699/93‑1 (MQ=255)

                                        tcCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCata                                                 >  2:458513/1‑93 (MQ=255)

                                        tcCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCata                                                 <  2:1703872/93‑1 (MQ=255)

                                        tcCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCata                                                 >  1:2428863/1‑93 (MQ=255)

                                        tcCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCata                                                 >  2:3642483/1‑93 (MQ=255)

                                        cccccTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCata                                                 <  1:3187270/92‑1 (MQ=255)

                                         ccccTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCatat                                                <  2:3992720/93‑1 (MQ=255)

                                         ccccTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCatat                                                <  1:6852552/93‑1 (MQ=255)

                                         ccccTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCatat                                                >  1:3929635/1‑93 (MQ=255)

                                         ccccCTGCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTGCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCatat                                                <  1:519305/93‑1 (MQ=255)

                                          cccTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCAtata                                               <  2:4328203/93‑1 (MQ=255)

                                          cccGTTCTACCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCAtata                                               <  1:2207260/93‑1 (MQ=255)

                                           ccTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATaa                                              >  1:7880592/1‑93 (MQ=255)

                                            cTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAAc                                             <  1:7520093/93‑1 (MQ=255)

                                             tttCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAAcc                                            <  1:145259/93‑1 (MQ=255)

                                             tttCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAAcc                                            <  2:3350870/93‑1 (MQ=255)

                                             tttCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAAcc                                            >  1:3122557/1‑93 (MQ=255)

                                                cttcCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCggg                                         <  2:6818118/93‑1 (MQ=255)

                                                 ttcCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGt                                        <  1:7011523/93‑1 (MQ=255)

                                                 ttcCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGt                                        <  1:3848460/93‑1 (MQ=255)

                                                 ttcCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGt                                        >  2:2235868/1‑93 (MQ=255)

                                                  tcCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTa                                       <  1:589083/93‑1 (MQ=255)

                                                    cACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATc                                     <  1:9555826/93‑1 (MQ=255)

                                                      cGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCaa                                   <  2:9080524/93‑1 (MQ=255)

                                                       gCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCaaa                                  >  2:2116650/1‑93 (MQ=255)

                                                       gCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCaaa                                  <  2:5466189/93‑1 (MQ=255)

                                                        ccATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAg                                 <  1:454097/93‑1 (MQ=255)

                                                         cATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGt                                <  1:4129699/93‑1 (MQ=255)

                                                           tCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGAATCAAAGTGa                              >  2:410439/1‑93 (MQ=255)

                                                            cAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGAc                             <  2:8748982/93‑1 (MQ=255)

                                                             aGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACg                            <  2:6284721/93‑1 (MQ=255)

                                                             aGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACg                            <  2:862028/93‑1 (MQ=255)

                                                              gTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGc                           <  2:3118574/93‑1 (MQ=255)

                                                              gTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGc                           >  2:7067599/1‑93 (MQ=255)

                                                               tAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGcc                          <  2:8283173/93‑1 (MQ=255)

                                                                 aaacAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCa                        <  2:1988996/90‑1 (MQ=255)

                                                                  aGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAg                       >  2:9667463/1‑93 (MQ=255)

                                                                    cAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGcc                     <  1:9374723/93‑1 (MQ=255)

                                                                     aaTGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGAGACGCCCAGccc                    >  2:5803485/1‑93 (MQ=255)

                                                                       tGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCa                  >  1:1098763/1‑93 (MQ=255)

                                                                       tGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCa                  <  1:1474387/93‑1 (MQ=255)

                                                                       tGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCa                  <  1:3302229/93‑1 (MQ=255)

                                                                       tGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCa                  <  1:5593904/93‑1 (MQ=255)

                                                                        ggAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCAt                 <  1:2822657/93‑1 (MQ=255)

                                                                        ggAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCAt                 <  1:9627567/93‑1 (MQ=255)

                                                                         gAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATg                >  2:9178076/1‑93 (MQ=255)

                                                                           aGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGcc              <  1:627329/93‑1 (MQ=255)

                                                                           aGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGcc              >  1:77738/1‑93 (MQ=255)

                                                                            ggCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGccc             >  1:3589647/1‑93 (MQ=255)

                                                                               acaTTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCccacc          >  1:6589072/1‑93 (MQ=255)

                                                                                caTTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCccacca         <  1:9595098/93‑1 (MQ=255)

                                                                                caTTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCccacca         <  1:4841918/93‑1 (MQ=255)

                                                                                caTTGCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCccacca         <  2:8445560/93‑1 (MQ=255)

                                                                                 aTTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAg        <  2:2627053/93‑1 (MQ=255)

                                                                                   ttCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGAt      <  1:5986648/93‑1 (MQ=255)

                                                                                    tCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGAtt     <  1:5299414/93‑1 (MQ=255)

                                                                                     ccGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTc    >  1:6330318/1‑93 (MQ=255)

                                                                                     ccGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTc    >  2:3227498/1‑93 (MQ=255)

                                                                                      cGGCGATGGGACGAAATACAGCCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCa   <  2:933424/93‑1 (MQ=255)

                                                                                       ggCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCAt  <  2:1309283/93‑1 (MQ=255)

CTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCAT  >  NC_000913/2666053‑2666232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 206 total aligned reads displayed.

TTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCATGGTC  >  NC_000913/2666050‑2666236

TTCCTGCACAATGGCGATGAAATCGCGTACTGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCG                                                                                               <  SRR4302540.3763727/94‑1 (MQ=60)

TTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCG                                                                                               <  SRR4302540.2527658/94‑1 (MQ=60)

TTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCG                                                                                               >  SRR4302540.7139071/1‑94 (MQ=60)

TTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCG                                                                                               <  SRR4302540.3763728/94‑1 (MQ=60)

  CCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGAT                                                                                             >  SRR4302540.4930496/1‑94 (MQ=60)

  CCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGAT                                                                                             <  SRR4302540.166284/94‑1 (MQ=60)

  CCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGAT                                                                                             <  SRR4302540.1792883/94‑1 (MQ=60)

  CCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGAT                                                                                             <  SRR4302540.4961022/94‑1 (MQ=60)

  CCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGAT                                                                                             <  SRR4302540.9253290/94‑1 (MQ=60)

  CCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGAT                                                                                             <  SRR4302540.6235810/94‑1 (MQ=60)

  CCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGAT                                                                                             >  SRR4302540.5601574/1‑94 (MQ=60)

  CCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGAT                                                                                             <  SRR4302540.4243306/94‑1 (MQ=60)

  CCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATC‑CCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATG                                                                                            >  SRR4302540.4930497/1‑94 (MQ=60)

   CTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATG                                                                                            >  SRR4302540.3146681/1‑94 (MQ=60)

   CTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATG                                                                                            <  SRR4302540.7115771/94‑1 (MQ=60)

    TGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGCAGGCACATTTCCGGCGATGG                                                                                           >  SRR4302540.1878985/1‑94 (MQ=60)

    TGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGG                                                                                           >  SRR4302540.63117/1‑94 (MQ=60)

    TGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGG                                                                                           <  SRR4302540.9682180/94‑1 (MQ=60)

    TGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGG                                                                                           <  SRR4302540.4436932/94‑1 (MQ=60)

     GCACAATGGCGGTGAAATCTCGTAATGCCGGCTTCAGCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGG                                                                                          <  SRR4302540.8959475/94‑1 (MQ=60)

     GCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCGTCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGG                                                                                          <  SRR4302540.2689762/94‑1 (MQ=60)

     GCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGG                                                                                          <  SRR4302540.1512771/94‑1 (MQ=60)

      CACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGA                                                                                         <  SRR4302540.2008096/94‑1 (MQ=60)

      CACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGA                                                                                         >  SRR4302540.9506373/1‑94 (MQ=60)

       ACAATGGCGATGAGATCGCGTAGTGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGCTGGGAC                                                                                        <  SRR4302540.9071599/94‑1 (MQ=60)

       ACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGAC                                                                                        >  SRR4302540.8088813/1‑94 (MQ=60)

       ACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGAC                                                                                        >  SRR4302540.5997759/1‑94 (MQ=60)

       ACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCAACGCCATCAGAAAAGGCATGGAAGGCACATTTCCGGCAGTGGGGC                                                                                        >  SRR4302540.3161352/1‑94 (MQ=60)

        CAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACG                                                                                       <  SRR4302540.9882071/94‑1 (MQ=60)

        CAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTGCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACG                                                                                       <  SRR4302540.4360612/94‑1 (MQ=60)

          ATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCGGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAA                                                                                     <  SRR4302540.4460875/94‑1 (MQ=60)

          ATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAA                                                                                     <  SRR4302540.1256103/94‑1 (MQ=60)

          ATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAA                                                                                     <  SRR4302540.3250531/94‑1 (MQ=60)

           TGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAA                                                                                    <  SRR4302540.2879041/94‑1 (MQ=60)

           TGGCGATGAAATCGCATAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAA                                                                                    <  SRR4302540.6575748/94‑1 (MQ=60)

            GGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAA                                                                                   <  SRR4302540.6485520/94‑1 (MQ=60)

            GGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAA                                                                                   >  SRR4302540.6134523/1‑94 (MQ=60)

            GGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAA                                                                                   >  SRR4302540.6134526/1‑94 (MQ=60)

            GGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAA                                                                                   <  SRR4302540.2220166/94‑1 (MQ=60)

            GGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAA                                                                                   <  SRR4302540.7922181/94‑1 (MQ=60)

             GCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAA                                                                                  <  SRR4302540.3723666/94‑1 (MQ=60)

             GCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAA                                                                                  <  SRR4302540.4604849/94‑1 (MQ=60)

              CGACGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAAC                                                                                 <  SRR4302540.2855938/94‑1 (MQ=60)

               GATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACA                                                                                >  SRR4302540.764907/1‑94 (MQ=60)

               GATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACA                                                                                >  SRR4302540.967958/1‑94 (MQ=60)

                ATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAA                                                                               >  SRR4302540.9647934/1‑94 (MQ=60)

                ATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAA                                                                               <  SRR4302540.8253430/94‑1 (MQ=60)

                 TGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAAC                                                                              <  SRR4302540.6700263/94‑1 (MQ=60)

                 TGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAAC                                                                              <  SRR4302540.718740/94‑1 (MQ=60)

                  GAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACC                                                                             <  SRR4302540.4401036/94‑1 (MQ=60)

                  GAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACC                                                                             <  SRR4302540.2379452/94‑1 (MQ=60)

                   AAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCT                                                                            <  SRR4302540.29052/94‑1 (MQ=60)

                   AAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCT                                                                            <  SRR4302540.387469/94‑1 (MQ=60)

                   AAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCT                                                                            <  SRR4302540.1509212/94‑1 (MQ=60)

                   AAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCT                                                                            <  SRR4302540.8125727/94‑1 (MQ=60)

                   AAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCT                                                                            <  SRR4302540.8125726/94‑1 (MQ=60)

                   AAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCT                                                                            <  SRR4302540.18505/94‑1 (MQ=60)

                    AATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTG                                                                           <  SRR4302540.9781534/94‑1 (MQ=60)

                    AATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTG                                                                           <  SRR4302540.9781535/94‑1 (MQ=60)

                    AATCGCGTAAATCCGGCTTCCACCCCCCTTTCCTCCCCGCCATCAGGAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTG                                                                           <  SRR4302540.2715855/94‑1 (MQ=55)

                     ATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGT                                                                          <  SRR4302540.5967410/94‑1 (MQ=60)

                     ATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGT                                                                          <  SRR4302540.1205009/94‑1 (MQ=60)

                     ATCGCGTAAAGCCCGCCTTATCTCCCCTTTCCTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGT                                                                          <  SRR4302540.4170532/94‑1 (MQ=60)

                       CGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCC                                                                        <  SRR4302540.4903366/94‑1 (MQ=60)

                       CGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCC                                                                        >  SRR4302540.5356862/1‑94 (MQ=60)

                       CGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCC                                                                        <  SRR4302540.928619/94‑1 (MQ=60)

                        GCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCG                                                                       <  SRR4302540.6603864/94‑1 (MQ=60)

                         CGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGG                                                                      <  SRR4302540.6391874/94‑1 (MQ=60)

                         CGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGG                                                                      <  SRR4302540.5837902/94‑1 (MQ=60)

                         CGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGG                                                                      >  SRR4302540.597023/1‑94 (MQ=60)

                          GTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGT                                                                     >  SRR4302540.8384439/1‑94 (MQ=60)

                          GTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGT                                                                     >  SRR4302540.653708/1‑94 (MQ=60)

                          GTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGA                                                                     >  SRR4302540.2925178/1‑94 (MQ=60)

                          GTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGA                                                                     >  SRR4302540.9407351/1‑94 (MQ=60)

                           TAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTA                                                                    <  SRR4302540.1509280/94‑1 (MQ=60)

                           TAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTA                                                                    <  SRR4302540.1509279/94‑1 (MQ=60)

                           TAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTA                                                                    <  SRR4302540.3263520/94‑1 (MQ=60)

                           TAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTA                                                                    <  SRR4302540.3263521/94‑1 (MQ=60)

                            AATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTAT                                                                   >  SRR4302540.2401696/1‑94 (MQ=60)

                            AATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTAT                                                                   >  SRR4302540.7260048/1‑94 (MQ=60)

                            AATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTAT                                                                   >  SRR4302540.7474610/1‑94 (MQ=60)

                            AATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGAAATGGAAGGCACATTTCTGGCGATGGGACGAAACACAACCTGTCCGacat                                                                   >  SRR4302540.3354161/1‑90 (MQ=60)

                              TGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTA                                                                 <  SRR4302540.7755397/94‑1 (MQ=60)

                              TGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTA                                                                 <  SRR4302540.4347116/94‑1 (MQ=60)

                               GCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAA                                                                >  SRR4302540.2657347/1‑94 (MQ=60)

                               GCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAA                                                                <  SRR4302540.5084764/94‑1 (MQ=60)

                               GCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAA                                                                <  SRR4302540.1602029/94‑1 (MQ=60)

                               GCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAA                                                                >  SRR4302540.5107112/1‑94 (MQ=60)

                                CCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAA                                                               >  SRR4302540.1417596/1‑94 (MQ=60)

                                 CGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAA                                                              <  SRR4302540.9372437/94‑1 (MQ=60)

                                 CGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAA                                                              <  SRR4302540.9446439/94‑1 (MQ=60)

                                  GGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAAT                                                             <  SRR4302540.7084108/94‑1 (MQ=60)

                                  GGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAAT                                                             <  SRR4302540.8893006/94‑1 (MQ=60)

                                   GCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATT                                                            <  SRR4302540.5085666/94‑1 (MQ=60)

                                    CTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTA                                                           >  SRR4302540.5124591/1‑94 (MQ=60)

                                    CTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTA                                                           <  SRR4302540.5515056/94‑1 (MQ=60)

                                     TTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTAT                                                          <  SRR4302540.7580246/94‑1 (MQ=60)

                                     TTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTAT                                                          <  SRR4302540.8889845/94‑1 (MQ=60)

                                     TTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTAT                                                          <  SRR4302540.7580245/94‑1 (MQ=60)

                                      TCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGTACGAAAAACAACCTGTCCGGTATTAAAATTATT                                                         >  SRR4302540.9845256/1‑94 (MQ=60)

                                       CATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAACCAACCTGTCCGGTATTAAAATTATTC                                                        <  SRR4302540.7596308/94‑1 (MQ=60)

                                        ATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGTACGAAAAACAACCTGTCCGGTATTAAAATTATTCA                                                       >  SRR4302540.5525779/1‑94 (MQ=60)

                                        ATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCA                                                       >  SRR4302540.2046823/1‑94 (MQ=60)

                                        ATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCA                                                       >  SRR4302540.6885257/1‑94 (MQ=60)

                                        ATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCA                                                       >  SRR4302540.4870331/1‑94 (MQ=60)

                                          CTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATA                                                     >  SRR4302540.2455030/1‑94 (MQ=60)

                                          CTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATA                                                     <  SRR4302540.7730387/94‑1 (MQ=60)

                                           TCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATAT                                                    <  SRR4302540.1622260/94‑1 (MQ=60)

                                           TCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATAT                                                    <  SRR4302540.5416988/94‑1 (MQ=60)

                                           TCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATAT                                                    <  SRR4302540.6937882/94‑1 (MQ=60)

                                           CCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATAT                                                    <  SRR4302540.3221899/94‑1 (MQ=60)

                                            CCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATA                                                   <  SRR4302540.524874/94‑1 (MQ=60)

                                            CCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATA                                                   <  SRR4302540.6928461/94‑1 (MQ=60)

                                            CCCCCTGCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTGCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATA                                                   <  SRR4302540.524873/94‑1 (MQ=60)

                                             CCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAA                                                  <  SRR4302540.3919050/94‑1 (MQ=60)

                                             CCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAA                                                  >  SRR4302540.7972619/1‑94 (MQ=60)

                                             CCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAA                                                  >  SRR4302540.776409/1‑94 (MQ=60)

                                             CCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAA                                                  <  SRR4302540.783011/94‑1 (MQ=60)

                                             CCCGTTCTACCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAA                                                  <  SRR4302540.2231100/94‑1 (MQ=60)

                                              CCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAAC                                                 <  SRR4302540.4277933/94‑1 (MQ=60)

                                              CCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAAC                                                 <  SRR4302540.7185608/94‑1 (MQ=60)

                                              CCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAAC                                                 <  SRR4302540.6357901/94‑1 (MQ=60)

                                               CTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACC                                                >  SRR4302540.3156668/1‑94 (MQ=60)

                                               CTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACC                                                <  SRR4302540.7604195/94‑1 (MQ=60)

                                               CTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACC                                                <  SRR4302540.415611/94‑1 (MQ=60)

                                                TTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCG                                               <  SRR4302540.146765/94‑1 (MQ=60)

                                                 TTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGG                                              <  SRR4302540.6584585/94‑1 (MQ=60)

                                                   CTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGT                                            >  SRR4302540.9714122/1‑94 (MQ=60)

                                                   CTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGT                                            >  SRR4302540.9248427/1‑94 (MQ=60)

                                                    TTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTA                                           <  SRR4302540.3890310/94‑1 (MQ=60)

                                                    TTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTA                                           <  SRR4302540.7089359/94‑1 (MQ=60)

                                                    TTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGAATTAAAATTATTCATATAACCGGGTA                                           >  SRR4302540.4504703/1‑94 (MQ=60)

                                                     TCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTAT                                          <  SRR4302540.595436/94‑1 (MQ=60)

                                                     TCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTAT                                          <  SRR4302540.3375407/94‑1 (MQ=60)

                                                     TCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTAT                                          <  SRR4302540.4395643/94‑1 (MQ=60)

                                                     TCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTAT                                          <  SRR4302540.1153269/94‑1 (MQ=60)

                                                      CCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATC                                         >  SRR4302540.6539627/1‑94 (MQ=60)

                                                      CCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATC                                         >  SRR4302540.4269240/1‑94 (MQ=60)

                                                       CACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATGA                                        >  SRR4302540.762341/1‑94 (MQ=60)

                                                       CACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCA                                        >  SRR4302540.9449903/1‑94 (MQ=60)

                                                       CACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCA                                        <  SRR4302540.9668831/94‑1 (MQ=60)

                                                          GCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAG                                     >  SRR4302540.8094950/1‑94 (MQ=60)

                                                          GCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAG                                     <  SRR4302540.6059020/94‑1 (MQ=60)

                                                           CCATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGT                                    <  SRR4302540.458941/94‑1 (MQ=60)

                                                            CATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTG                                   <  SRR4302540.4174344/94‑1 (MQ=60)

                                                            CATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTG                                   >  SRR4302540.6232065/1‑94 (MQ=60)

                                                            CATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTG                                   <  SRR4302540.7991613/94‑1 (MQ=60)

                                                            CATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTG                                   <  SRR4302540.9691563/94‑1 (MQ=60)

                                                            CATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTG                                   <  SRR4302540.5124312/94‑1 (MQ=60)

                                                             ATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGA                                  <  SRR4302540.2833566/94‑1 (MQ=60)

                                                             ATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGA                                  <  SRR4302540.7366734/94‑1 (MQ=60)

                                                             ATCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGA                                  <  SRR4302540.1474201/94‑1 (MQ=60)

                                                              TCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGAC                                 <  SRR4302540.8785086/94‑1 (MQ=60)

                                                              TCAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGAC                                 <  SRR4302540.3916400/94‑1 (MQ=60)

                                                               CAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACG                                <  SRR4302540.5559311/94‑1 (MQ=60)

                                                               CAGTAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACG                                <  SRR4302540.1356377/94‑1 (MQ=60)

                                                                  TAAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCC                             <  SRR4302540.9520052/94‑1 (MQ=60)

                                                                   AAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCA                            <  SRR4302540.5094690/94‑1 (MQ=60)

                                                                   AAAGCAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCA                            <  SRR4302540.1694574/94‑1 (MQ=60)

                                                                       CAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCC                        <  SRR4302540.9486322/94‑1 (MQ=60)

                                                                       CAATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCC                        >  SRR4302540.2727864/1‑94 (MQ=60)

                                                                        AATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCC                       >  SRR4302540.8742555/1‑94 (MQ=60)

                                                                         ATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCA                      >  SRR4302540.795318/1‑94 (MQ=60)

                                                                         ATGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCA                      >  SRR4302540.1110078/1‑94 (MQ=60)

                                                                          TGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCAT                     <  SRR4302540.5655453/94‑1 (MQ=60)

                                                                          TGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCAT                     <  SRR4302540.3338380/94‑1 (MQ=60)

                                                                          TGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCAT                     <  SRR4302540.2725382/94‑1 (MQ=60)

                                                                          TGGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCAT                     <  SRR4302540.1490508/94‑1 (MQ=60)

                                                                           GGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATG                    <  SRR4302540.9741020/94‑1 (MQ=60)

                                                                           GGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATG                    >  SRR4302540.4039132/1‑94 (MQ=60)

                                                                           GGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATG                    >  SRR4302540.1293112/1‑94 (MQ=60)

                                                                           GGAAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATG                    <  SRR4302540.2853147/94‑1 (MQ=60)

                                                                             AAGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCC                  >  SRR4302540.78555/1‑94 (MQ=60)

                                                                              AGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCC                 >  SRR4302540.3628859/1‑94 (MQ=60)

                                                                              AGGCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCC                 <  SRR4302540.634007/94‑1 (MQ=60)

                                                                                GCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCAC               >  SRR4302540.2233150/1‑94 (MQ=60)

                                                                                GCACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCAC               >  SRR4302540.3777897/1‑94 (MQ=60)

                                                                                 CACATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACC              >  SRR4302540.6662051/1‑94 (MQ=60)

                                                                                   CATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAG            <  SRR4302540.4893777/94‑1 (MQ=60)

                                                                                   CATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAG            <  SRR4302540.9714098/94‑1 (MQ=60)

                                                                                   CATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAG            <  SRR4302540.9708325/94‑1 (MQ=60)

                                                                                   CATTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAG            <  SRR4302540.5865250/94‑1 (MQ=60)

                                                                                     TTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGAT          <  SRR4302540.1506261/94‑1 (MQ=60)

                                                                                     TTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGAT          >  SRR4302540.3195726/1‑94 (MQ=60)

                                                                                     TTTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGAT          <  SRR4302540.5502056/94‑1 (MQ=60)

                                                                                      TTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATT         >  SRR4302540.7091313/1‑94 (MQ=60)

                                                                                      TTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATT         <  SRR4302540.4835944/94‑1 (MQ=60)

                                                                                      TTCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATT         <  SRR4302540.6052956/94‑1 (MQ=60)

                                                                                       TCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTC        >  SRR4302540.6400811/1‑94 (MQ=60)

                                                                                       TCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTC        <  SRR4302540.5357395/94‑1 (MQ=60)

                                                                                       TCCGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTC        <  SRR4302540.3153448/94‑1 (MQ=60)

                                                                                         CGGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCAT      <  SRR4302540.1479418/94‑1 (MQ=60)

                                                                                          GGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCATG     >  SRR4302540.9460873/1‑94 (MQ=60)

                                                                                          GGCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCATG     <  SRR4302540.6155962/94‑1 (MQ=60)

                                                                                           GCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCATGG    <  SRR4302540.4503801/94‑1 (MQ=60)

                                                                                           GCGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCATGG    <  SRR4302540.2589412/94‑1 (MQ=60)

                                                                                            CGATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCATGGT   >  SRR4302540.3332809/1‑94 (MQ=60)

                                                                                             GATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCATGGTC  <  SRR4302540.4933972/94‑1 (MQ=60)

                                                                                             GATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCATGGTC  >  SRR4302540.9712307/1‑94 (MQ=60)

                                                                                             GATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCATGGTC  <  SRR4302540.2591880/94‑1 (MQ=60)

TTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCAAAGTGACGCCCAGCCCCATGCCCACCAGATTCATGGTC  >  NC_000913/2666050‑2666236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`