Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,688,297	T→C	L295L (TTA→TTG)	yfhK ←	putative 2‑component sensor protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,688,297	0	T	C	99.4%	1026.4 / ‑3.9	319	L295L (TTA→TTG)	yfhK	putative 2‑component sensor protein
Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (135/182); total (135/184)
Fisher's exact test for biased strand distribution p-value = 5.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01

Only 100 of 333 total aligned reads displayed.

AGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCA  >  NC_000913/2688208‑2688386

 gTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAAtt                                                                                       >  2:1080965/1‑93 (MQ=255)

  tttttGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTc                                                                                      >  2:3765617/1‑93 (MQ=255)

    tttGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAg                                                                                    <  1:1370600/93‑1 (MQ=255)

      tGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTg                                                                                  >  1:8526192/1‑93 (MQ=255)

      tGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTg                                                                                  >  1:2181887/1‑93 (MQ=255)

       gCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGc                                                                                 <  1:10012140/93‑1 (MQ=255)

         aaaTTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGccc                                                                               <  1:3110447/93‑1 (MQ=255)

            ttGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTcg                                                                            <  1:7418020/93‑1 (MQ=255)

             tGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTcgc                                                                           <  2:2960488/93‑1 (MQ=255)

                ggCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCa                                                                        >  1:4978105/1‑93 (MQ=255)

                ggCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCa                                                                        <  1:45581/93‑1 (MQ=255)

                   tgctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAc                                                                     >  2:2806848/1‑93 (MQ=255)

                   tgctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAc                                                                     <  2:2436227/93‑1 (MQ=255)

                   tgctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAc                                                                     <  2:193290/93‑1 (MQ=255)

                    gctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt                                                                    <  2:8244694/93‑1 (MQ=255)

                      tgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCg                                                                  >  1:685761/1‑93 (MQ=255)

                      tgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCg                                                                  <  2:6802278/93‑1 (MQ=255)

                      tgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCg                                                                  >  1:3737496/1‑93 (MQ=255)

                       gctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGTGCATACTCGc                                                                 >  1:7303089/1‑93 (MQ=255)

                       gctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGc                                                                 >  2:5472455/1‑93 (MQ=255)

                        ctATCAAGAATGCTCACCACCTCTTTTTGCGCTAGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGcc                                                                <  1:9679673/93‑1 (MQ=255)

                         tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa                                                               <  2:1350722/93‑1 (MQ=255)

                          aTCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAg                                                              >  1:1296348/1‑93 (MQ=255)

                           tCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGt                                                             >  2:9146039/1‑93 (MQ=255)

                           tCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGt                                                             >  2:847604/1‑93 (MQ=255)

                            cAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTg                                                            >  2:3613145/1‑93 (MQ=255)

                             aaGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTgg                                                           <  2:9695386/93‑1 (MQ=255)

                              aGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGc                                                          <  1:5661613/93‑1 (MQ=255)

                              aGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGc                                                          >  2:270934/1‑93 (MQ=255)

                                aaTGCTCACCACCTCTTTTTGCTTTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGt                                                        <  2:252999/93‑1 (MQ=255)

                                 aTGCTCACCCCCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATCCTCGCCAGTGGCGtt                                                       <  2:6255023/93‑1 (MQ=255)

                                   gCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCgagta                                                     <  2:662152/93‑5 (MQ=255)

                                   gCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGtttt                                                     <  1:9276407/93‑1 (MQ=255)

                                      caccacCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTaa                                                  <  1:284750/93‑1 (MQ=255)

                                      caccacCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTaa                                                  <  2:9056707/93‑1 (MQ=255)

                                       accaccTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAt                                                 >  2:4843108/1‑93 (MQ=255)

                                       accaccTCTTCTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAt                                                 <  1:1511881/93‑1 (MQ=255)

                                        ccaccTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCATCCAGCACTTGATTGCCATAGTGCATACTCGCCAGTGGTGTTTTTAAtt                                                >  1:5475629/1‑93 (MQ=255)

                                        ccaccTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAtt                                                <  1:3891992/93‑1 (MQ=255)

                                        ccaccTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAtt                                                <  1:6281012/93‑1 (MQ=255)

                                         caccTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTc                                               >  2:4968381/1‑93 (MQ=255)

                                         caccTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTc                                               <  1:42380/93‑1 (MQ=255)

                                           ccTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATCCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAGTCAt                                             >  1:9240383/1‑93 (MQ=255)

                                            ctctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATg                                            >  1:3323748/1‑93 (MQ=255)

                                            ctctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATg                                            <  2:808614/93‑1 (MQ=255)

                                            ctctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATg                                            <  2:4523516/93‑1 (MQ=255)

                                             tctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATga                                           <  2:5213302/93‑1 (MQ=255)

                                             tctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATga                                           <  2:6497369/93‑1 (MQ=255)

                                               tttgtGCTCTGGGTTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATCCTCGCCAGTGGCGTTTTTAATTCATgaga                                         <  1:943337/93‑1 (MQ=255)

                                                  ttGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATaa                                      <  1:6050088/93‑1 (MQ=255)

                                                   tGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATaaa                                     <  2:1618885/93‑1 (MQ=255)

                                                       ctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTc                                 <  1:9510666/93‑1 (MQ=255)

                                                       ctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTc                                 <  1:9858118/93‑1 (MQ=255)

                                                       ctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTc                                 <  1:8099883/93‑1 (MQ=255)

                                                        tGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCt                                >  2:3443794/1‑93 (MQ=255)

                                                        tGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCt                                <  1:46009/93‑1 (MQ=255)

                                                         ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCTAGTGTCGTTTTTAATTCATGAGATAAATGTCtt                               >  1:8926119/1‑93 (MQ=255)

                                                         ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCtt                               <  1:5609181/93‑1 (MQ=255)

                                                         ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCtt                               >  2:5931892/1‑93 (MQ=255)

                                                          gCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTa                              <  2:8821856/93‑1 (MQ=255)

                                                          gCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTa                              <  1:764987/93‑1 (MQ=255)

                                                           cGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATGCTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaa                             <  1:215716/93‑1 (MQ=255)

                                                           cGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaa                             <  1:4428344/93‑1 (MQ=255)

                                                           cGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaa                             <  1:6406159/93‑1 (MQ=255)

                                                             tAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa                           >  1:3615277/1‑93 (MQ=255)

                                                             tAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa                           <  1:5105614/93‑1 (MQ=255)

                                                             tAAGCGGCCCGACAACCTGGTCAGCCAGCAATCCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa                           <  2:7887256/93‑1 (MQ=255)

                                                              aaGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaaa                          <  1:7081330/93‑1 (MQ=255)

                                                              aaGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaaa                          <  1:1753959/93‑1 (MQ=255)

                                                                gCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAtt                        <  2:7036706/93‑1 (MQ=255)

                                                                gCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAtt                        <  2:4132275/93‑1 (MQ=255)

                                                                  ggCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGa                      <  2:2179602/93‑1 (MQ=255)

                                                                  ggCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGa                      <  1:6616312/93‑1 (MQ=255)

                                                                  ggCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGa                      <  1:1695051/93‑1 (MQ=255)

                                                                   gCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAt                     <  2:5855181/93‑1 (MQ=255)

                                                                   gCCCGACAACCTAGTCAGCCAGCAATTCAGAGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAt                     >  2:7766578/1‑93 (MQ=255)

                                                                    cccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATg                    <  1:322847/93‑1 (MQ=255)

                                                                     ccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATgg                   >  1:2916950/1‑93 (MQ=255)

                                                                       gACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCg                 <  2:7384865/93‑1 (MQ=255)

                                                                         cAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGtt               <  1:1011917/93‑1 (MQ=255)

                                                                         cAACCTGGTCAGCAAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGtt               <  1:226199/93‑1 (MQ=255)

                                                                          aaCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTg              <  1:7546846/93‑1 (MQ=255)

                                                                          aaCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTg              >  2:3325513/1‑93 (MQ=255)

                                                                          aaCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTg              >  2:7160940/1‑93 (MQ=255)

                                                                          aaCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTg              >  2:2001036/1‑93 (MQ=255)

                                                                           aCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTgg             <  2:8364028/93‑1 (MQ=255)

                                                                            ccTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTggg            <  1:8673489/93‑1 (MQ=255)

                                                                             cTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTgggt           >  2:1486503/1‑92 (MQ=255)

                                                                             cTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGa           >  1:5839133/1‑93 (MQ=255)

                                                                               ggTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGAtt         >  1:6157590/1‑93 (MQ=255)

                                                                                gTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTc        <  1:28069/93‑1 (MQ=255)

                                                                                gTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTc        <  1:8321674/93‑1 (MQ=255)

                                                                                 tCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTcc       >  2:1709775/1‑93 (MQ=255)

                                                                                 tCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTcc       >  1:7904161/1‑93 (MQ=255)

                                                                                  cagccagcAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCa      <  2:8615477/93‑1 (MQ=255)

                                                                                  cagccagcAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCa      <  2:3123283/93‑1 (MQ=255)

                                                                                    gCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGc    <  2:3707244/93‑1 (MQ=255)

                                                                                     ccAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGcc   <  2:3382770/93‑1 (MQ=255)

                                                                                      cAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCa  >  2:1969813/1‑93 (MQ=255)

                                                                                      cAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCa  <  2:4336274/93‑1 (MQ=255)

AGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCA  >  NC_000913/2688208‑2688386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGAC  >  NC_000913/2688204‑2688390

GATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGC                                                                                               >  SRR4302540.4039104/1‑94 (MQ=60)

GATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGC                                                                                               >  SRR4302540.7888864/1‑94 (MQ=60)

GATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGC                                                                                               >  SRR4302540.1378024/1‑94 (MQ=60)

GATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGC                                                                                               >  SRR4302540.8842387/1‑94 (MQ=60)

 ATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCA                                                                                              <  SRR4302540.351738/94‑1 (MQ=60)

 ATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCA                                                                                              >  SRR4302540.8945681/1‑94 (MQ=60)

     GTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTC                                                                                          >  SRR4302540.300042/1‑94 (MQ=60)

     GTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTC                                                                                          >  SRR4302540.5468731/1‑94 (MQ=60)

     GTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTC                                                                                          >  SRR4302540.618177/1‑94 (MQ=60)

     GTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTC                                                                                          >  SRR4302540.8461088/1‑94 (MQ=60)

     GTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTC                                                                                          >  SRR4302540.2203109/1‑94 (MQ=60)

      TTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCA                                                                                         >  SRR4302540.5841302/1‑94 (MQ=60)

      TTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCA                                                                                         >  SRR4302540.3744118/1‑94 (MQ=60)

      TTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCA                                                                                         <  SRR4302540.7636458/94‑1 (MQ=60)

      TTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCA                                                                                         <  SRR4302540.8209889/94‑1 (MQ=60)

       TTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAG                                                                                        <  SRR4302540.2847477/94‑1 (MQ=60)

        TTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGT                                                                                       <  SRR4302540.1385125/94‑1 (MQ=60)

        TTTGCAAATTGCGGCTGCGTCTATCAAGAATGTTCACCACTTCTTTTTGCGCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGT                                                                                       <  SRR4302540.7989733/94‑1 (MQ=60)

         TTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTG                                                                                      >  SRR4302540.2205431/1‑94 (MQ=60)

         TTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTG                                                                                      >  SRR4302540.8625262/1‑94 (MQ=60)

           GCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCC                                                                                    <  SRR4302540.10128715/94‑1 (MQ=60)

             AAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCT                                                                                  <  SRR4302540.3144475/94‑1 (MQ=60)

             AAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCT                                                                                  >  SRR4302540.8241936/1‑94 (MQ=60)

             AAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCT                                                                                  <  SRR4302540.1350713/94‑1 (MQ=60)

              AATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTC                                                                                 <  SRR4302540.144858/94‑1 (MQ=60)

              AATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTC                                                                                 <  SRR4302540.8783693/94‑1 (MQ=60)

               ATTGCGGCTGCTGCTATCAAGAATGCTCACCGCCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCG                                                                                <  SRR4302540.3198712/94‑1 (MQ=60)

               ATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCG                                                                                <  SRR4302540.3704174/94‑1 (MQ=60)

                TTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGC                                                                               <  SRR4302540.7500644/94‑1 (MQ=60)

                TTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGC                                                                               <  SRR4302540.3624837/94‑1 (MQ=60)

                 TGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCG                                                                              <  SRR4302540.4020307/94‑1 (MQ=60)

                   CGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCA                                                                            >  SRR4302540.5031988/1‑94 (MQ=60)

                    GGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCAT                                                                           <  SRR4302540.46048/94‑1 (MQ=60)

                       TGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACT                                                                        <  SRR4302540.3027289/94‑1 (MQ=60)

                       TGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACT                                                                        <  SRR4302540.798659/94‑1 (MQ=60)

                        GCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTC                                                                       >  SRR4302540.9620409/1‑94 (MQ=60)

                        GCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTC                                                                       <  SRR4302540.7625656/94‑1 (MQ=60)

                         CTTCTATCAAGAATGCTCCCCCCCTCTTTTTGGTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCG                                                                      <  SRR4302540.7841746/94‑1 (MQ=60)

                         CTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCG                                                                      >  SRR4302540.3778272/1‑94 (MQ=60)

                         CTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCG                                                                      >  SRR4302540.693121/1‑94 (MQ=60)

                         CTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCG                                                                      <  SRR4302540.2918330/94‑1 (MQ=60)

                          TGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGTGCATACTCGC                                                                     >  SRR4302540.7384607/1‑94 (MQ=60)

                          TGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGC                                                                     >  SRR4302540.940745/1‑94 (MQ=60)

                           GCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCC                                                                    <  SRR4302540.7386885/94‑1 (MQ=60)

                            CTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCA                                                                   <  SRR4302540.9793561/94‑1 (MQ=60)

                            CTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCA                                                                   >  SRR4302540.4642557/1‑94 (MQ=60)

                            CTATCAAGAATGCTCACCACCTCTTTTTGCGCTAGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCA                                                                   <  SRR4302540.9793562/94‑1 (MQ=60)

                             TATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAG                                                                  <  SRR4302540.7376959/94‑1 (MQ=60)

                             TATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAG                                                                  <  SRR4302540.1383248/94‑1 (MQ=60)

                             TATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAG                                                                  >  SRR4302540.1617421/1‑94 (MQ=60)

                             TATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAG                                                                  <  SRR4302540.16500/94‑1 (MQ=60)

                             TATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAG                                                                  >  SRR4302540.8577861/1‑94 (MQ=60)

                             TATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAG                                                                  >  SRR4302540.1309771/1‑94 (MQ=60)

                              ATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGT                                                                 <  SRR4302540.4916603/94‑1 (MQ=60)

                              ATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGT                                                                 >  SRR4302540.5805578/1‑94 (MQ=60)

                              ATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGT                                                                 >  SRR4302540.381124/1‑94 (MQ=60)

                               TCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTG                                                                <  SRR4302540.3824908/94‑1 (MQ=60)

                                CAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGG                                                               <  SRR4302540.6321752/94‑1 (MQ=60)

                                CAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGG                                                               <  SRR4302540.6321753/94‑1 (MQ=60)

                                 AAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGC                                                              <  SRR4302540.7459421/94‑1 (MQ=60)

                                 AAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGC                                                              <  SRR4302540.2182880/94‑1 (MQ=60)

                                  AGAATGCTCGCCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCG                                                             <  SRR4302540.1206871/94‑1 (MQ=60)

                                  AGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCG                                                             <  SRR4302540.5723954/94‑1 (MQ=60)

                                   GAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGT                                                            <  SRR4302540.6706238/94‑1 (MQ=60)

                                   GAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGT                                                            <  SRR4302540.5542165/94‑1 (MQ=60)

                                    AATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTT                                                           >  SRR4302540.9191733/1‑94 (MQ=60)

                                     ATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTT                                                          >  SRR4302540.9651417/1‑94 (MQ=60)

                                     ATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTT                                                          <  SRR4302540.3488262/94‑1 (MQ=60)

                                     ATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTT                                                          >  SRR4302540.5072906/1‑94 (MQ=60)

                                       GCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTT                                                        <  SRR4302540.9387309/94‑1 (MQ=60)

                                       GCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTT                                                        <  SRR4302540.1753019/94‑1 (MQ=60)

                                        CTCTCCACCTCTTTTTTCTCTGGCGTAATCGTCCGGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATGCTCGCCAGTGGCGTTTTTA                                                       <  SRR4302540.1864870/94‑1 (MQ=60)

                                        CTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTA                                                       >  SRR4302540.4630500/1‑94 (MQ=60)

                                          CACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAT                                                     <  SRR4302540.287553/94‑1 (MQ=60)

                                          CACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAT                                                     <  SRR4302540.6425786/94‑1 (MQ=60)

                                           ACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCATCCAGCACTTGATTGCCATAGTGCATACTCGCCAGTGGTGTTTTTAATT                                                    >  SRR4302540.5535896/1‑94 (MQ=53)

                                           ACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATT                                                    >  SRR4302540.5535899/1‑94 (MQ=60)

                                           ACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATT                                                    >  SRR4302540.325665/1‑94 (MQ=60)

                                           ACCACCTCTTCTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATT                                                    <  SRR4302540.1528586/94‑1 (MQ=60)

                                            CCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTC                                                   <  SRR4302540.5948814/94‑1 (MQ=60)

                                            CCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTC                                                   <  SRR4302540.6350908/94‑1 (MQ=60)

                                            CCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTC                                                   <  SRR4302540.3934244/94‑1 (MQ=60)

                                             CACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCA                                                  >  SRR4302540.1449880/1‑94 (MQ=60)

                                             CACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCA                                                  >  SRR4302540.2864650/1‑94 (MQ=60)

                                             CACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCA                                                  <  SRR4302540.42813/94‑1 (MQ=60)

                                              CCCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCAT                                                 <  SRR4302540.730129/94‑1 (MQ=60)

                                              CCCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCAT                                                 <  SRR4302540.9361297/94‑1 (MQ=60)

                                              ACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTAAT                                                 <  SRR4302540.1013172/94‑1 (MQ=60)

                                              ACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATCCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAGTCAT                                                 >  SRR4302540.9351068/1‑94 (MQ=60)

                                               CCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATG                                                >  SRR4302540.253202/1‑94 (MQ=60)

                                               CCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATG                                                >  SRR4302540.3360210/1‑94 (MQ=60)

                                                cgcgttgTGCTCTGGCGTAAGCGGCCCGACAACCGGGTCAGCCAGCGATTCAGGTCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGA                                               <  SRR4302540.497394/87‑1 (MQ=60)

                                                CTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGA                                               >  SRR4302540.951161/1‑94 (MQ=60)

                                                  CTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGA                                             <  SRR4302540.2901435/94‑1 (MQ=60)

                                                  CTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGA                                             >  SRR4302540.8896166/1‑94 (MQ=60)

                                                   TTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCCATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTGTTTTATTCATGAGAA                                            >  SRR4302540.9132010/1‑94 (MQ=60)

                                                   TTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGAT                                            <  SRR4302540.3279882/94‑1 (MQ=60)

                                                   TTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGAT                                            <  SRR4302540.10144540/94‑1 (MQ=60)

                                                   TTTGTGCTCTGGGTTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATCCTCGCCAGTGGCGTTTTTAATTCATGAGAT                                            <  SRR4302540.953180/94‑1 (MQ=60)

                                                    TTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATA                                           <  SRR4302540.4230355/94‑1 (MQ=60)

                                                     TTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAA                                          <  SRR4302540.5087345/94‑1 (MQ=60)

                                                      TTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAA                                         <  SRR4302540.6117322/94‑1 (MQ=60)

                                                       TGCTGAGGCGTAAGCGACCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAAT                                        <  SRR4302540.1668937/94‑1 (MQ=60)

                                                       TGCTCTGGCGTAAGCGGCCCGACAGCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAAT                                        <  SRR4302540.2479250/94‑1 (MQ=60)

                                                        tccCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATG                                       <  SRR4302540.9936362/91‑1 (MQ=60)

                                                        GCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATG                                       <  SRR4302540.2232192/94‑1 (MQ=60)

                                                         CTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGT                                      <  SRR4302540.6533697/94‑1 (MQ=60)

                                                         CTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGT                                      >  SRR4302540.4066095/1‑94 (MQ=60)

                                                           CTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCT                                    >  SRR4302540.9195257/1‑94 (MQ=60)

                                                           CTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCT                                    <  SRR4302540.9973314/94‑1 (MQ=60)

                                                           CTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCT                                    <  SRR4302540.8193893/94‑1 (MQ=60)

                                                           CTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCT                                    <  SRR4302540.9973313/94‑1 (MQ=60)

                                                           CTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCT                                    <  SRR4302540.9623321/94‑1 (MQ=60)

                                                            TGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCTAGTGTCGTTTTTAATTCATGAGATAAATGTCTT                                   >  SRR4302540.9029939/1‑94 (MQ=60)

                                                            TGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTT                                   <  SRR4302540.46478/94‑1 (MQ=60)

                                                            TGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTT                                   >  SRR4302540.8731664/1‑94 (MQ=60)

                                                            TGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCACCAGTGGCGTTTTTAATTCATGAGATAAATGTCTT                                   >  SRR4302540.6165601/1‑94 (MQ=60)

                                                             GGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTA                                  <  SRR4302540.5670888/94‑1 (MQ=60)

                                                             GGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTA                                  >  SRR4302540.5747178/1‑94 (MQ=60)

                                                              GCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAA                                 <  SRR4302540.773129/94‑1 (MQ=60)

                                                              GCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAA                                 <  SRR4302540.6446133/94‑1 (MQ=60)

                                                              GCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAA                                 <  SRR4302540.1404555/94‑1 (MQ=60)

                                                               CGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATGCTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAA                                <  SRR4302540.217823/94‑1 (MQ=60)

                                                               CGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAA                                <  SRR4302540.6477462/94‑1 (MQ=60)

                                                               CGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAA                                <  SRR4302540.4476325/94‑1 (MQ=60)

                                                                GTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAA                               >  SRR4302540.5349165/1‑94 (MQ=60)

                                                                GTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAA                               >  SRR4302540.3654811/1‑94 (MQ=60)

                                                                GTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAA                               >  SRR4302540.9586347/1‑94 (MQ=60)

                                                                 TAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAA                              <  SRR4302540.9384323/94‑1 (MQ=60)

                                                                 TAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAA                              <  SRR4302540.5160885/94‑1 (MQ=60)

                                                                 TAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAA                              <  SRR4302540.8547335/94‑1 (MQ=60)

                                                                  AAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAT                             <  SRR4302540.7160145/94‑1 (MQ=60)

                                                                  AAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAT                             >  SRR4302540.7065245/1‑94 (MQ=60)

                                                                  AAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAT                             <  SRR4302540.1772964/94‑1 (MQ=60)

                                                                      GGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAT                         <  SRR4302540.1713424/94‑1 (MQ=60)

                                                                      GGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAT                         <  SRR4302540.9956285/94‑1 (MQ=60)

                                                                      GGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAT                         <  SRR4302540.6689588/94‑1 (MQ=60)

                                                                      GGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAT                         >  SRR4302540.3066097/1‑94 (MQ=60)

                                                                       GCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATG                        <  SRR4302540.6977260/94‑1 (MQ=60)

                                                                       GCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCATCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATG                        <  SRR4302540.6580213/94‑1 (MQ=60)

                                                                        CCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATCCTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGG                       <  SRR4302540.5999078/94‑1 (MQ=60)

                                                                        CCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGG                       >  SRR4302540.2948873/1‑94 (MQ=60)

                                                                        CCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGG                       <  SRR4302540.326075/94‑1 (MQ=60)

                                                                        CCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGG                       <  SRR4302540.7410766/94‑1 (MQ=60)

                                                                        CCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGG                       <  SRR4302540.326080/94‑1 (MQ=60)

                                                                        CCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGG                       <  SRR4302540.9587870/94‑1 (MQ=60)

                                                                        CCAGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGG                       >  SRR4302540.1726062/1‑94 (MQ=60)

                                                                         CCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGC                      <  SRR4302540.6837913/94‑1 (MQ=60)

                                                                         CCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGC                      <  SRR4302540.2132365/94‑1 (MQ=60)

                                                                         CCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGC                      <  SRR4302540.8714457/94‑1 (MQ=60)

                                                                         CCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGC                      <  SRR4302540.6837914/94‑1 (MQ=60)

                                                                         CCGACAACCTGGTCAGCCAGCAATTCAGGGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGC                      <  SRR4302540.2132366/94‑1 (MQ=60)

                                                                           GACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGT                    >  SRR4302540.7568279/1‑94 (MQ=60)

                                                                            ACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATAGCGTT                   <  SRR4302540.8039639/94‑1 (MQ=60)

                                                                             CAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTG                  <  SRR4302540.1022176/94‑1 (MQ=60)

                                                                             CAACCTGGTCAGCAAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTG                  <  SRR4302540.228386/94‑1 (MQ=60)

                                                                              AACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGG                 <  SRR4302540.7631429/94‑1 (MQ=60)

                                                                               ACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGG                >  SRR4302540.8106502/1‑94 (MQ=60)

                                                                               ACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGG                >  SRR4302540.1208297/1‑94 (MQ=60)

                                                                               ACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGG                >  SRR4302540.4645784/1‑94 (MQ=60)

                                                                                CCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGA               >  SRR4302540.5428048/1‑94 (MQ=60)

                                                                                CCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGA               <  SRR4302540.8774236/94‑1 (MQ=60)

                                                                                CCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGA               >  SRR4302540.5903703/1‑94 (MQ=60)

                                                                                 CTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGAT              <  SRR4302540.4311227/94‑1 (MQ=60)

                                                                                  TGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATT             >  SRR4302540.6226193/1‑94 (MQ=60)

                                                                                    GTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCC           <  SRR4302540.8418269/94‑1 (MQ=60)

                                                                                    GTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCC           >  SRR4302540.7996347/1‑94 (MQ=60)

                                                                                    GTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCC           <  SRR4302540.28368/94‑1 (MQ=60)

                                                                                     TCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCA          >  SRR4302540.2057067/1‑94 (MQ=60)

                                                                                     TCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCA          <  SRR4302540.4427221/94‑1 (MQ=60)

                                                                                      CAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAG         <  SRR4302540.4515074/94‑1 (MQ=60)

                                                                                      CAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAG         <  SRR4302540.6324368/94‑1 (MQ=60)

                                                                                      CAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAG         <  SRR4302540.3476614/94‑1 (MQ=60)

                                                                                      CAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAG         <  SRR4302540.7679043/94‑1 (MQ=60)

                                                                                      CAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAG         >  SRR4302540.4836103/1‑94 (MQ=60)

                                                                                      CAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAG         <  SRR4302540.233617/94‑1 (MQ=60)

                                                                                         CCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCA      >  SRR4302540.452720/1‑94 (MQ=60)

                                                                                         CCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCA      >  SRR4302540.5722240/1‑94 (MQ=60)

                                                                                         CCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCA      >  SRR4302540.5722239/1‑94 (MQ=60)

                                                                                         CCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCA      <  SRR4302540.2233850/94‑1 (MQ=60)

                                                                                          CAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCAT     >  SRR4302540.3830344/1‑94 (MQ=60)

                                                                                           AGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATG    <  SRR4302540.6142108/94‑1 (MQ=60)

                                                                                            GCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGA   <  SRR4302540.7628644/94‑1 (MQ=60)

                                                                                             CAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGAC  >  SRR4302540.5732938/1‑94 (MQ=60)

                                                                                             CAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGAC  >  SRR4302540.7376998/1‑94 (MQ=60)

                                                                                             CAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGAC  >  SRR4302540.2554804/1‑94 (MQ=60)

GATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGAC  >  NC_000913/2688204‑2688390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`