Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,688,297 |
T→C |
L295L (TTA→TTG) |
yfhK ← |
putative 2‑component sensor protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,688,297 | 0 | T | C | 100.0%
| 714.5
/ NA
| 218 | L295L (TTA→TTG) | yfhK | putative 2‑component sensor protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/120); total (98/120) |
Only 100 of 220 total aligned reads displayed.
CAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCA > NC_000913/2688207‑2688386
|
cAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCaa < 2:5415241/93‑1 (MQ=255)
tttttGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTc < 2:2325003/93‑1 (MQ=255)
ttGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGt > 1:4631833/1‑93 (MQ=255)
tGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTg < 1:6001650/93‑1 (MQ=255)
aaTTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCt < 2:1201484/93‑1 (MQ=255)
aaTTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCt < 1:4302100/93‑1 (MQ=255)
aTTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTc < 2:56445/93‑1 (MQ=255)
aTTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTc > 1:2217295/1‑93 (MQ=255)
ttGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTcg < 1:5283411/93‑1 (MQ=255)
tGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTcgc < 2:2367613/93‑1 (MQ=255)
ggCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCa < 1:6305760/93‑1 (MQ=255)
ggCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCa > 2:1806949/1‑93 (MQ=255)
gctgctgctATCAAGAATGCTCACCGCCTCTTTTTGCTCTGTCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCAt < 2:4753031/93‑1 (MQ=255)
tgctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAc > 2:5555673/1‑93 (MQ=255)
tgctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAc > 1:4161200/1‑93 (MQ=255)
tgctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAc > 1:4911758/1‑93 (MQ=255)
tctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt < 1:1761588/92‑1 (MQ=255)
gctgctATCAAGAATGCTCCCCACCTCTTTTTGCCCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt < 1:5171914/93‑1 (MQ=255)
gctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt < 2:2191048/93‑1 (MQ=255)
gctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt < 2:2820298/93‑1 (MQ=255)
gctgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACt > 1:1172399/1‑93 (MQ=255)
tgctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCg > 1:2654131/1‑93 (MQ=255)
gctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGc > 2:3234385/1‑93 (MQ=255)
gctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGc > 1:1241488/1‑93 (MQ=255)
ctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGcc > 2:5354804/1‑93 (MQ=255)
ctATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGcc > 1:1654523/1‑93 (MQ=255)
tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa < 2:182412/93‑1 (MQ=255)
tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa > 2:3608457/1‑93 (MQ=255)
tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa > 2:1355142/1‑93 (MQ=255)
tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa > 2:5314147/1‑93 (MQ=255)
tATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCa > 1:1794581/1‑93 (MQ=255)
aTCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAg > 1:6133001/1‑93 (MQ=255)
tCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGt > 2:1457196/1‑93 (MQ=255)
tCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGt < 1:2317165/93‑1 (MQ=255)
tCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGt > 2:5781585/1‑93 (MQ=255)
cAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTg < 2:1067630/93‑1 (MQ=255)
aaGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTgg > 2:605571/1‑93 (MQ=255)
aaGAATGCTCACCACCTCTTTTTGCGCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTgg < 1:4044550/93‑1 (MQ=255)
aGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGc < 2:2231409/93‑1 (MQ=255)
aGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGc > 1:5530111/1‑93 (MQ=255)
aGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGc > 1:4490137/1‑93 (MQ=255)
gAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCg < 1:960319/93‑1 (MQ=255)
aaTGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGt < 2:4640375/93‑1 (MQ=255)
aTGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGtt < 1:3408663/93‑1 (MQ=255)
tcTCACCTCCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGtttt < 1:5772475/92‑1 (MQ=255)
tCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTa < 2:4980820/93‑1 (MQ=255)
tCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTa > 1:2991789/1‑93 (MQ=255)
tCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTa > 2:71046/1‑93 (MQ=255)
caccacCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTaa < 1:5291073/93‑1 (MQ=255)
caccacCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTaa > 1:6186070/1‑93 (MQ=255)
ccTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCAt < 1:829402/93‑1 (MQ=255)
tctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATga < 1:1680814/93‑1 (MQ=255)
tctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATga < 2:4602003/93‑1 (MQ=255)
ctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATgag > 2:3136874/1‑93 (MQ=255)
ctTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATgag < 1:3536028/93‑1 (MQ=255)
ttttGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGAt < 1:1135171/93‑1 (MQ=255)
tttGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATa < 1:4005042/93‑1 (MQ=255)
ttGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATaa > 2:3762272/1‑93 (MQ=255)
tGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATaaa < 1:3625206/93‑1 (MQ=255)
gCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAAt < 1:3488658/93‑1 (MQ=255)
ctctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATg > 2:4458191/1‑93 (MQ=255)
tctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGt > 1:3323248/1‑93 (MQ=255)
tctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGt > 1:3192405/1‑93 (MQ=255)
tctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGt > 1:5332133/1‑93 (MQ=255)
ctGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTc < 1:69187/93‑1 (MQ=255)
tGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCt < 2:147514/93‑1 (MQ=255)
tGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCt < 1:1413901/93‑1 (MQ=255)
ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCtt < 2:4946846/93‑1 (MQ=255)
ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCtt < 1:2957939/93‑1 (MQ=255)
ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCtt < 2:3887797/93‑1 (MQ=255)
ggCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGCGGCGTTTTTAATTCATGAGATAAATGTCtt > 2:4492812/1‑93 (MQ=255)
cGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaa < 2:4288006/93‑1 (MQ=255)
tAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa < 1:2581655/93‑1 (MQ=255)
tAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa < 2:3800040/93‑1 (MQ=255)
tAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa > 1:3692060/1‑93 (MQ=255)
tAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaa < 2:2129628/93‑1 (MQ=255)
aaGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTaaaaa > 2:5533869/1‑93 (MQ=255)
aGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAt > 2:880680/1‑93 (MQ=255)
gCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAtt < 1:3160855/93‑1 (MQ=255)
gCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAAtt > 2:5026231/1‑93 (MQ=255)
cGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTg < 2:6123526/93‑1 (MQ=255)
gCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAt > 2:1104809/1‑93 (MQ=255)
gCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAt < 1:1534316/93‑1 (MQ=255)
gCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAt < 2:1392994/93‑1 (MQ=255)
cccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATg < 2:4359328/93‑1 (MQ=255)
cccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATg < 2:408154/93‑1 (MQ=255)
ccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATgg < 2:1296715/93‑1 (MQ=255)
ccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATgg < 2:571448/93‑1 (MQ=255)
ccGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATgg < 2:3928080/93‑1 (MQ=255)
gACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCg > 1:72452/1‑93 (MQ=255)
cAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGtt < 2:558146/93‑1 (MQ=255)
aaCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTg < 1:3451952/93‑1 (MQ=255)
aaCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTg > 2:6292674/1‑93 (MQ=255)
aCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTgg > 2:3430304/1‑93 (MQ=255)
aCCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTgg < 1:4740157/93‑1 (MQ=255)
cTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGa < 2:4395449/93‑1 (MQ=255)
tGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGGTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGAt > 1:803947/1‑93 (MQ=255)
gTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTc > 1:2910445/1‑93 (MQ=255)
tCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTcc > 1:1964765/1‑93 (MQ=255)
cagccagcAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCa < 1:1380605/93‑1 (MQ=255)
|
CAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCA > NC_000913/2688207‑2688386
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGAC > NC_000913/2688205‑2688390
|
ATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCA > SRR4302533.2389098/1‑94 (MQ=60)
ATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCA > SRR4302533.3742582/1‑94 (MQ=60)
ATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCA > SRR4302533.4249745/1‑94 (MQ=60)
AGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATT > SRR4302533.95771/1‑94 (MQ=60)
AGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATT > SRR4302533.5327306/1‑94 (MQ=60)
AGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATT > SRR4302533.5185843/1‑94 (MQ=60)
GTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTC < SRR4302533.3675580/94‑1 (MQ=60)
TTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCT‑ACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGT > SRR4302533.973090/1‑94 (MQ=60)
TTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGT > SRR4302533.4659901/1‑94 (MQ=60)
TTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGT < SRR4302533.1769973/94‑1 (MQ=60)
TTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTG < SRR4302533.5317423/94‑1 (MQ=60)
TGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGC < SRR4302533.6038007/94‑1 (MQ=60)
AATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTC < SRR4302533.4327980/94‑1 (MQ=60)
AATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTC > SRR4302533.2230982/1‑94 (MQ=60)
TTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGC < SRR4302533.5315063/94‑1 (MQ=60)
TGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCG < SRR4302533.5037278/94‑1 (MQ=60)
GGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCAT > SRR4302533.3373259/1‑94 (MQ=60)
GGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCAT < SRR4302533.2985523/94‑1 (MQ=60)
GGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCAT < SRR4302533.6343505/94‑1 (MQ=60)
GGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGACCTCGCGCAT > SRR4302533.2173797/1‑94 (MQ=60)
CTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAC > SRR4302533.4941512/1‑94 (MQ=60)
CTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAC > SRR4302533.1173082/1‑94 (MQ=60)
CTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATAC > SRR4302533.4186417/1‑94 (MQ=60)
TGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACT < SRR4302533.3583655/94‑1 (MQ=60)
TGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACT > SRR4302533.1179436/1‑94 (MQ=60)
TCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTC < SRR4302533.1772321/94‑1 (MQ=60)
GCTGCTATCAAGAATGCTCCCCACCTCTTTTTGCCCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTC < SRR4302533.5203121/94‑1 (MQ=60)
CTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCG < SRR4302533.641763/94‑1 (MQ=60)
CTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCG > SRR4302533.2670433/1‑94 (MQ=60)
TGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGC > SRR4302533.1248908/1‑94 (MQ=60)
GCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCC > SRR4302533.295041/1‑94 (MQ=60)
GCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCC < SRR4302533.4269526/94‑1 (MQ=60)
GCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCC < SRR4302533.3252641/94‑1 (MQ=60)
GCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCC < SRR4302533.5398690/94‑1 (MQ=60)
GCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCC > SRR4302533.1664541/1‑94 (MQ=60)
CTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCA > SRR4302533.1805502/1‑94 (MQ=60)
TATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAG > SRR4302533.6169951/1‑94 (MQ=60)
ATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGT < SRR4302533.1442949/94‑1 (MQ=60)
TCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTG < SRR4302533.2331511/94‑1 (MQ=60)
TCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTG < SRR4302533.6177809/94‑1 (MQ=60)
AAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGC > SRR4302533.4517327/1‑94 (MQ=60)
AAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGC > SRR4302533.5563494/1‑94 (MQ=60)
AAGAATGCTCACCACCTCTTTTTGCGCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGC < SRR4302533.4069167/94‑1 (MQ=60)
AGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCG > SRR4302533.1329896/1‑94 (MQ=60)
GAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGT < SRR4302533.965964/94‑1 (MQ=60)
GAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGT < SRR4302533.5791259/94‑1 (MQ=60)
GAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGT < SRR4302533.2601055/94‑1 (MQ=60)
ATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTT < SRR4302533.814173/94‑1 (MQ=60)
ATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTT > SRR4302533.3523862/1‑94 (MQ=60)
ATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTT < SRR4302533.3429721/94‑1 (MQ=60)
TCTCACCTCCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTT < SRR4302533.5807330/94‑1 (MQ=60)
CTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTA > SRR4302533.754974/1‑94 (MQ=60)
CTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTA > SRR4302533.3010084/1‑94 (MQ=60)
TCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAA > SRR4302533.2890657/1‑94 (MQ=60)
TCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAA > SRR4302533.6223204/1‑94 (MQ=60)
CACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAT < SRR4302533.5322755/94‑1 (MQ=60)
CACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAT > SRR4302533.1942986/1‑94 (MQ=60)
CACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAAT < SRR4302533.3452791/94‑1 (MQ=60)
CCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTC < SRR4302533.3898311/94‑1 (MQ=60)
CACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGAGCATACTCGCCAGTGGCGTTTTTAATTCA > SRR4302533.284584/1‑94 (MQ=60)
ACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCAT > SRR4302533.6115580/1‑94 (MQ=60)
CCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATG < SRR4302533.834267/94‑1 (MQ=60)
CTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGA > SRR4302533.3475224/1‑94 (MQ=60)
CTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGA < SRR4302533.4395431/94‑1 (MQ=60)
TCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAG < SRR4302533.1690996/94‑1 (MQ=60)
TCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAG < SRR4302533.693011/94‑1 (MQ=60)
TCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAG < SRR4302533.4244737/94‑1 (MQ=60)
CTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGA < SRR4302533.3557821/94‑1 (MQ=60)
CTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGA > SRR4302533.5572872/1‑94 (MQ=60)
TTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGAT < SRR4302533.1801499/94‑1 (MQ=60)
TTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGAT < SRR4302533.1674503/94‑1 (MQ=60)
TTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATA > SRR4302533.5952508/1‑94 (MQ=60)
TTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATA < SRR4302533.1141922/94‑1 (MQ=60)
TTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAA < SRR4302533.4029421/94‑1 (MQ=60)
TTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAA > SRR4302533.6235295/1‑94 (MQ=60)
TTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAA < SRR4302533.1236937/94‑1 (MQ=60)
TGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAAT < SRR4302533.3647511/94‑1 (MQ=60)
TGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAAT < SRR4302533.3647512/94‑1 (MQ=60)
GCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATG < SRR4302533.3510173/94‑1 (MQ=60)
CTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGT < SRR4302533.1534435/94‑1 (MQ=60)
CTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGT > SRR4302533.3212044/1‑94 (MQ=60)
CTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGT > SRR4302533.3343772/1‑94 (MQ=60)
CTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGT > SRR4302533.5364090/1‑94 (MQ=60)
TCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTC > SRR4302533.2274685/1‑94 (MQ=60)
CTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCT < SRR4302533.69639/94‑1 (MQ=60)
CTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCT > SRR4302533.4674468/1‑94 (MQ=60)
TGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTT < SRR4302533.1422453/94‑1 (MQ=60)
GGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTA < SRR4302533.2976018/94‑1 (MQ=60)
GGCGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTA < SRR4302533.1662421/94‑1 (MQ=60)
CGTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAA < SRR4302533.1828393/94‑1 (MQ=60)
GTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAA > SRR4302533.45844/1‑94 (MQ=60)
GTAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAA > SRR4302533.3714744/1‑94 (MQ=60)
TAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAA < SRR4302533.2597536/94‑1 (MQ=60)
TAAGCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAA > SRR4302533.3255641/1‑94 (MQ=60)
GCGGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTG < SRR4302533.3180307/94‑1 (MQ=60)
GGCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGAT > SRR4302533.5283779/1‑94 (MQ=60)
GCCCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATG < SRR4302533.1543533/94‑1 (MQ=60)
CCGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGC > SRR4302533.320709/1‑94 (MQ=60)
CGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCG > SRR4302533.72918/1‑94 (MQ=60)
CGACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCG < SRR4302533.4049076/94‑1 (MQ=60)
ACAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGCGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTT < SRR4302533.4114556/94‑1 (MQ=60)
CAACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTG > SRR4302533.2466376/1‑94 (MQ=60)
AACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGG > SRR4302533.3155223/1‑94 (MQ=60)
AACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGG < SRR4302533.3473265/94‑1 (MQ=60)
ACCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGG < SRR4302533.4768898/94‑1 (MQ=60)
CCTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGA > SRR4302533.728479/1‑94 (MQ=60)
CTGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGGTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGAT > SRR4302533.808668/1‑94 (MQ=60)
TGGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATT > SRR4302533.1389724/1‑94 (MQ=60)
GGTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTC > SRR4302533.2928312/1‑94 (MQ=60)
GTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCC > SRR4302533.1976764/1‑94 (MQ=60)
GTCAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCC > SRR4302533.4910596/1‑94 (MQ=60)
CAGCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAG < SRR4302533.1388919/94‑1 (MQ=60)
GCCAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCC > SRR4302533.63844/1‑94 (MQ=60)
CAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCAT > SRR4302533.518450/1‑94 (MQ=60)
CAGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCAT > SRR4302533.162432/1‑94 (MQ=60)
AGCAATTCAGTGCCCTCGCGCATACTCGCCAGTGTCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATG < SRR4302533.6263444/94‑1 (MQ=60)
CAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGAC > SRR4302533.2751747/1‑94 (MQ=60)
CAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGAC < SRR4302533.2843752/94‑1 (MQ=60)
CAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGAC < SRR4302533.2595779/94‑1 (MQ=60)
|
ATCAGTTTTTGCAAATTGCGGCTGCTGCTATCAAGAATGCTCACCACCTCTTTTTGCTCTGGCGTAAGCGGCCCGACAACCTGGTCAGCCAGTAATTCAGTGCCCTCGCGCATACTCGCCAGTGGCGTTTTTAATTCATGAGATAAATGTCTTAAAAATTGATGGCGTTGGGATTCCAGCCATGAC > NC_000913/2688205‑2688390
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
