Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,732,197	T→C	intergenic (‑4/+126)	clpB ← / ← yfiH	ClpB/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,732,197	0	T	C	99.4%	992.2 / ‑1.6	309	intergenic (‑4/+126)	clpB/yfiH	ClpB/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); major base C (159/146); minor base . (2/0); total (162/147)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.62e-01

Only 100 of 330 total aligned reads displayed.

GATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAG  >  NC_000913/2732107‑2732286

gATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAAcccc                                                                                         <  2:4531168/93‑1 (MQ=255)

gATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAAcccc                                                                                         >  1:2922107/1‑93 (MQ=255)

 aTAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAAcccct                                                                                        >  1:6968134/1‑93 (MQ=255)

      ttGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCAt                                                                                   >  2:2589592/1‑93 (MQ=255)

       tGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATa                                                                                  >  2:3329137/1‑93 (MQ=255)

        ggTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATaa                                                                                 <  2:4272235/93‑1 (MQ=255)

        ggTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATaa                                                                                 <  1:7636981/93‑1 (MQ=255)

        ggTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATaa                                                                                 >  2:9262122/1‑93 (MQ=255)

         gTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAAc                                                                                >  1:8699846/1‑93 (MQ=255)

          ttGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACg                                                                               >  2:4923595/1‑93 (MQ=255)

          ttGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACg                                                                               >  1:1871350/1‑93 (MQ=255)

          ttGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACg                                                                               >  1:4411376/1‑93 (MQ=255)

           tGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACgg                                                                              <  2:4970432/93‑1 (MQ=255)

              cGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATc                                                                           <  2:1991043/93‑1 (MQ=255)

              cGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATc                                                                           >  1:5666321/1‑93 (MQ=255)

               gTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCa                                                                          >  1:4587476/1‑93 (MQ=255)

                tGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaa                                                                         >  2:8105055/1‑93 (MQ=255)

                tGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaa                                                                         <  1:7926608/93‑1 (MQ=255)

                 gCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCaaa                                                                        <  2:7549060/93‑1 (MQ=255)

                  cccGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAg                                                                       <  2:59576/93‑1 (MQ=255)

                  cccGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAg                                                                       <  2:6217257/93‑1 (MQ=255)

                      aGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGc                                                                   >  1:4651051/1‑93 (MQ=255)

                      aGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGc                                                                   >  1:507098/1‑93 (MQ=255)

                      aGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGc                                                                   >  1:5263523/1‑93 (MQ=255)

                       gTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCt                                                                  >  1:8014278/1‑93 (MQ=255)

                       gTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCt                                                                  <  1:2314740/93‑1 (MQ=255)

                        tGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTa                                                                 >  1:2079715/1‑93 (MQ=255)

                        tGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTa                                                                 >  1:6406143/1‑93 (MQ=255)

                         ccAAGTGATTGGGCATCGTCAAGAGCAATCTGGAATTTATTAGTAATACGATTCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTAc                                                                <  1:1295097/92‑1 (MQ=255)

                           aaGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTg                                                              >  2:1790352/1‑93 (MQ=255)

                           aaGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTg                                                              <  2:1858027/93‑1 (MQ=255)

                           aaGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTg                                                              >  1:9689525/1‑93 (MQ=255)

                             gTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGga                                                            <  1:4289950/93‑1 (MQ=255)

                             gTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGga                                                            <  2:5842698/93‑1 (MQ=255)

                              tGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGgag                                                           >  2:3805318/1‑93 (MQ=255)

                               gATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGgaga                                                          >  2:7811963/1‑93 (MQ=255)

                                aTTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGAt                                                         <  2:773525/93‑1 (MQ=255)

                                 ttGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGAtt                                                        >  1:9022096/1‑93 (MQ=255)

                                 ttGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGAtt                                                        <  1:7477730/93‑1 (MQ=255)

                                  tGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTa                                                       <  2:5456908/93‑1 (MQ=255)

                                   gggCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTaa                                                      <  1:3066850/93‑1 (MQ=255)

                                    ggCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTaaa                                                     <  2:543787/93‑1 (MQ=255)

                                      cATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATg                                                   >  2:2184391/1‑93 (MQ=255)

                                      cATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATg                                                   <  1:9591671/93‑1 (MQ=255)

                                       aTCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGa                                                  <  1:9389950/93‑1 (MQ=255)

                                        tCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATTCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAg                                                 >  1:8438293/1‑93 (MQ=255)

                                        tCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAg                                                 >  1:6749061/1‑93 (MQ=255)

                                        tCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAg                                                 >  1:4038384/1‑93 (MQ=255)

                                          ggCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGt                                               <  1:2209321/93‑1 (MQ=255)

                                          ggCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGt                                               >  1:5713059/1‑93 (MQ=255)

                                           gCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTc                                              <  1:9905574/93‑1 (MQ=255)

                                              agagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATc                                           >  2:4778174/1‑93 (MQ=255)

                                              agagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATc                                           >  1:4526140/1‑93 (MQ=255)

                                              agagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATc                                           >  2:4437379/1‑93 (MQ=255)

                                               gagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATcc                                          >  2:6358465/1‑93 (MQ=255)

                                               gagCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATcc                                          <  2:7688969/93‑1 (MQ=255)

                                                   aaGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCa                                      >  2:7110241/1‑93 (MQ=255)

                                                     gCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAat                                    <  2:5770839/93‑1 (MQ=255)

                                                     gCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAat                                    >  2:3184544/1‑93 (MQ=255)

                                                     gCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAat                                    <  2:6803246/93‑1 (MQ=255)

                                                     gCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAat                                    <  1:383605/93‑1 (MQ=255)

                                                      cTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAatt                                   <  1:6088092/93‑1 (MQ=255)

                                                       tGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAatta                                  >  1:3384911/1‑93 (MQ=255)

                                                       tGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAatta                                  >  1:163517/1‑93 (MQ=255)

                                                       tGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAatta                                  >  2:9384159/1‑93 (MQ=255)

                                                        ggAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAattat                                 >  2:9618189/1‑93 (MQ=255)

                                                         gAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAattatt                                <  1:1228797/93‑1 (MQ=255)

                                                         gAATTTATTAGAAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAattatt                                <  2:4020383/93‑1 (MQ=255)

                                                          aaTTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTc                               <  1:3612622/93‑1 (MQ=255)

                                                            tttATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCaa                             <  2:5038268/93‑1 (MQ=255)

                                                            tttATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCaa                             >  1:355582/1‑93 (MQ=255)

                                                             ttattaGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAg                            <  1:5038812/93‑1 (MQ=255)

                                                             ttattaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAg                            <  1:1062941/93‑1 (MQ=255)

                                                             ttattaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAg                            >  1:5454372/1‑93 (MQ=255)

                                                             ttattaGTAAGACGACCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAg                            >  2:1299422/1‑93 (MQ=255)

                                                               attaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGt                          >  1:1373103/1‑93 (MQ=255)

                                                               attaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGt                          >  2:8517075/1‑93 (MQ=255)

                                                                ttaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGtt                         >  1:7225342/1‑93 (MQ=255)

                                                                ttaGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGtt                         >  1:6924183/1‑93 (MQ=255)

                                                                  aGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAt                       <  1:6621816/93‑1 (MQ=255)

                                                                   gTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAtt                      <  1:2618774/93‑1 (MQ=255)

                                                                   gTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAtt                      >  2:1388934/1‑93 (MQ=255)

                                                                    tAAGACGATCCAGACGCATAACCCCTCCCATGACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTg                     <  1:10026520/93‑1 (MQ=255)

                                                                      aGACGTTCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGGCATCCTTCAATTATACAAGGTTATTGAc                   >  1:8986471/1‑93 (MQ=255)

                                                                       gACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGAcc                  >  2:2915704/1‑93 (MQ=255)

                                                                       gACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGAcc                  >  2:2289203/1‑93 (MQ=255)

                                                                        aCGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCa                 <  2:3443009/93‑1 (MQ=255)

                                                                         cGATCCAGACGCATAAC‑CCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGa               >  1:8382398/1‑93 (MQ=255)

                                                                           aTCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAt              <  1:4083775/93‑1 (MQ=255)

                                                                            tCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAtt             >  2:4330989/1‑93 (MQ=255)

                                                                             ccAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTa            >  2:2411991/1‑93 (MQ=255)

                                                                              cAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTaa           >  2:9042510/1‑93 (MQ=255)

                                                                               aGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAt          <  2:73272/93‑1 (MQ=255)

                                                                                gACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtg         <  2:7507906/93‑1 (MQ=255)

                                                                                  cGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtgtg       >  1:2985436/1‑93 (MQ=255)

                                                                                  cGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAtgtg       <  1:5283840/93‑1 (MQ=255)

                                                                                   gCATAAACCCTCCCATAACGTATCAAAGATGCTACAGGCGCGTAAACAACAGCGACCCTTAATTATTCAAGGTTATTCGCCAGAATAATGTga      >  2:8664924/1‑93 (MQ=255)

                                                                                    cATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaa     >  1:5937265/1‑93 (MQ=255)

                                                                                     aTAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaa    <  2:5543395/93‑1 (MQ=255)

                                                                                       aaCCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTgaaaag  >  1:8687171/1‑93 (MQ=255)

GATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAG  >  NC_000913/2732107‑2732286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTCGATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAA  >  NC_000913/2732104‑2732290

TTCGATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACC                                                                                               >  SRR4302540.3282656/1‑94 (MQ=60)

 TCGATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCC                                                                                              <  SRR4302540.4502883/94‑1 (MQ=60)

 TCGATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCC                                                                                              <  SRR4302540.9952845/94‑1 (MQ=60)

  CGATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCC                                                                                             >  SRR4302540.2954130/1‑94 (MQ=60)

   GATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCT                                                                                            >  SRR4302540.7045601/1‑94 (MQ=60)

   GATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCT                                                                                            >  SRR4302540.4101421/1‑94 (MQ=60)

    ATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTC                                                                                           >  SRR4302540.249564/1‑94 (MQ=60)

    ATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTC                                                                                           >  SRR4302540.6324818/1‑94 (MQ=60)

     TAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCC                                                                                          <  SRR4302540.4612720/94‑1 (MQ=60)

     TAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCC                                                                                          <  SRR4302540.4612721/94‑1 (MQ=60)

     TAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCC                                                                                          <  SRR4302540.4985958/94‑1 (MQ=60)

      AAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCC                                                                                         >  SRR4302540.1302042/1‑94 (MQ=60)

      AAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCC                                                                                         >  SRR4302540.5562051/1‑94 (MQ=60)

       AATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCA                                                                                        <  SRR4302540.8215224/94‑1 (MQ=60)

       AATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCA                                                                                        >  SRR4302540.8794051/1‑94 (MQ=60)

       AATTGGTTGCCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCT                                                                                        >  SRR4302540.8794045/1‑94 (MQ=60)

        ATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCAT                                                                                       >  SRR4302540.8038024/1‑94 (MQ=60)

         TTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATCACCCCTCCCATA                                                                                      >  SRR4302540.2987492/1‑94 (MQ=60)

         TTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATA                                                                                      >  SRR4302540.2987490/1‑94 (MQ=60)

          TGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAA                                                                                     <  SRR4302540.3466091/94‑1 (MQ=60)

           GGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAAC                                                                                    >  SRR4302540.8800834/1‑94 (MQ=60)

           GGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAAC                                                                                    <  SRR4302540.7722906/94‑1 (MQ=60)

           GGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAAC                                                                                    <  SRR4302540.4347126/94‑1 (MQ=60)

            GTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACG                                                                                   >  SRR4302540.4246924/1‑94 (MQ=60)

            GTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACG                                                                                   >  SRR4302540.10029263/1‑94 (MQ=60)

            GTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACG                                                                                   >  SRR4302540.4459193/1‑94 (MQ=60)

            GTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACG                                                                                   >  SRR4302540.1891858/1‑94 (MQ=60)

             TGGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGG                                                                                  <  SRR4302540.5520782/94‑1 (MQ=60)

               GTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGAT                                                                                <  SRR4302540.1905723/94‑1 (MQ=60)

               GTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGAT                                                                                >  SRR4302540.524502/1‑94 (MQ=60)

               GTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGAT                                                                                <  SRR4302540.7395486/94‑1 (MQ=60)

                TCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATC                                                                               >  SRR4302540.5728724/1‑94 (MQ=60)

                TCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATC                                                                               >  SRR4302540.7602669/1‑94 (MQ=60)

                 CGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCA                                                                              >  SRR4302540.4636880/1‑94 (MQ=60)

                 CGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCA                                                                              >  SRR4302540.5253212/1‑94 (MQ=60)

                  GTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAA                                                                             >  SRR4302540.6923275/1‑94 (MQ=60)

                   TGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAA                                                                            <  SRR4302540.8018996/94‑1 (MQ=60)

                   TGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAA                                                                            >  SRR4302540.2253630/1‑94 (MQ=60)

                      CCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTT                                                                         <  SRR4302540.1362074/94‑1 (MQ=60)

                      CCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTT                                                                         >  SRR4302540.5324319/1‑94 (MQ=60)

                       CGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTG                                                                        >  SRR4302540.5812424/1‑94 (MQ=60)

                       CGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTG                                                                        >  SRR4302540.8674119/1‑94 (MQ=60)

                        GAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGC                                                                       >  SRR4302540.4700827/1‑94 (MQ=60)

                        GAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGC                                                                       >  SRR4302540.5320953/1‑94 (MQ=60)

                        GAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGC                                                                       >  SRR4302540.512534/1‑94 (MQ=60)

                         AGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCT                                                                      <  SRR4302540.2124138/94‑1 (MQ=60)

                         AGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCT                                                                      >  SRR4302540.8107499/1‑94 (MQ=60)

                          GTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTA                                                                     >  SRR4302540.6477446/1‑94 (MQ=60)

                          GTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTA                                                                     >  SRR4302540.2102062/1‑94 (MQ=60)

                          GTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTA                                                                     <  SRR4302540.2339660/94‑1 (MQ=60)

                           TGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTAC                                                                    <  SRR4302540.9361430/94‑1 (MQ=60)

                            GCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACT                                                                   <  SRR4302540.9119572/94‑1 (MQ=60)

                            GCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACT                                                                   <  SRR4302540.1308498/94‑1 (MQ=60)

                            GCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACT                                                                   >  SRR4302540.4678129/1‑94 (MQ=60)

                            CCAAGTGATTGGGCATCGTCAAGAGCAATCTGGAATTTATTAGTAATACGATTCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACT                                                                   <  SRR4302540.1308500/94‑1 (MQ=60)

                             CAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTG                                                                  >  SRR4302540.2255936/1‑94 (MQ=60)

                             CAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTG                                                                  >  SRR4302540.9803496/1‑94 (MQ=60)

                              AAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGG                                                                 <  SRR4302540.1332870/94‑1 (MQ=60)

                              AAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGG                                                                 <  SRR4302540.2850107/94‑1 (MQ=60)

                                GTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAG                                                               <  SRR4302540.4336620/94‑1 (MQ=60)

                                 TGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGA                                                              >  SRR4302540.5119696/1‑94 (MQ=60)

                                  GATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGAT                                                             <  SRR4302540.4227233/94‑1 (MQ=60)

                                   ATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATT                                                            >  SRR4302540.9130358/1‑94 (MQ=60)

                                   ATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATT                                                            >  SRR4302540.7983427/1‑94 (MQ=60)

                                    TTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATATCCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTA                                                           <  SRR4302540.1231338/94‑1 (MQ=60)

                                    TTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTA                                                           <  SRR4302540.1995170/94‑1 (MQ=60)

                                    TTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTA                                                           <  SRR4302540.7561188/94‑1 (MQ=60)

                                    TTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTA                                                           <  SRR4302540.5313832/94‑1 (MQ=60)

                                     tggtgATCGGCAATAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAA                                                          <  SRR4302540.1440870/89‑1 (MQ=60)

                                     TGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAA                                                          >  SRR4302540.4687688/1‑94 (MQ=60)

                                     TGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAA                                                          <  SRR4302540.1440871/94‑1 (MQ=60)

                                      GGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAA                                                         <  SRR4302540.3100497/94‑1 (MQ=60)

                                       GGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAAT                                                        <  SRR4302540.7949116/94‑1 (MQ=60)

                                         CATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGA                                                      <  SRR4302540.9704872/94‑1 (MQ=60)

                                          ATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATTCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAG                                                     >  SRR4302540.8536252/1‑94 (MQ=60)

                                          ATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAG                                                     >  SRR4302540.4081924/1‑94 (MQ=60)

                                          ATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAG                                                     >  SRR4302540.5096678/1‑94 (MQ=60)

                                          ATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAG                                                     >  SRR4302540.8536251/1‑94 (MQ=60)

                                          ATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAG                                                     <  SRR4302540.3062002/94‑1 (MQ=60)

                                          ATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAG                                                     >  SRR4302540.6823632/1‑94 (MQ=60)

                                          ATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAG                                                     <  SRR4302540.41370/94‑1 (MQ=60)

                                          ATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAG                                                     <  SRR4302540.8937130/94‑1 (MQ=60)

                                          ATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAG                                                     <  SRR4302540.9501694/94‑1 (MQ=60)

                                          ATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAG                                                     >  SRR4302540.5773687/1‑94 (MQ=60)

                                           TCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGG                                                    <  SRR4302540.3910816/94‑1 (MQ=60)

                                            CGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGT                                                   <  SRR4302540.8130857/94‑1 (MQ=60)

                                            CGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGT                                                   >  SRR4302540.8512586/1‑94 (MQ=60)

                                            CGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGT                                                   >  SRR4302540.5775948/1‑94 (MQ=60)

                                             GGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGATGTC                                                  >  SRR4302540.7487552/1‑94 (MQ=60)

                                             GGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTC                                                  <  SRR4302540.2233184/94‑1 (MQ=60)

                                              GCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCA                                                 >  SRR4302540.4775212/1‑94 (MQ=60)

                                              GCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCA                                                 <  SRR4302540.10021298/94‑1 (MQ=60)

                                              GCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCA                                                 >  SRR4302540.5740087/1‑94 (MQ=60)

                                                AAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATC                                               <  SRR4302540.9221817/94‑1 (MQ=60)

                                                AAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATC                                               >  SRR4302540.4575144/1‑94 (MQ=60)

                                                AAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATC                                               <  SRR4302540.7084662/94‑1 (MQ=60)

                                                AAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATC                                               >  SRR4302540.1055935/1‑94 (MQ=60)

                                                 AGAGCAAGCTGGAATGTATTAGTAAGACGATCCAGACGCATCACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCC                                              <  SRR4302540.6920144/94‑1 (MQ=60)

                                                 AGAGCAAGCGTGAATTTATTAGTAAGACGAGCCAGACGCATAACCCCGCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCC                                              <  SRR4302540.6920143/94‑1 (MQ=60)

                                                  GAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCC                                             <  SRR4302540.1029946/94‑1 (MQ=60)

                                                  GAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCC                                             <  SRR4302540.1806074/94‑1 (MQ=60)

                                                  GAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCC                                             <  SRR4302540.5571951/94‑1 (MQ=60)

                                                   AGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCT                                            >  SRR4302540.6105401/1‑94 (MQ=60)

                                                    GCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTC                                           <  SRR4302540.9119688/94‑1 (MQ=60)

                                                     CAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCA                                          <  SRR4302540.4641625/94‑1 (MQ=60)

                                                     CAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCA                                          >  SRR4302540.3119902/1‑94 (MQ=60)

                                                      AAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAA                                         >  SRR4302540.3376854/1‑94 (MQ=60)

                                                      AAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAA                                         >  SRR4302540.6003448/1‑94 (MQ=60)

                                                        GCTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATT                                       <  SRR4302540.387568/94‑1 (MQ=60)

                                                         CTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCGATTA                                      <  SRR4302540.6155847/94‑1 (MQ=60)

                                                         CTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTA                                      >  SRR4302540.165156/1‑94 (MQ=60)

                                                         CTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTA                                      >  SRR4302540.3421850/1‑94 (MQ=60)

                                                         CTGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTA                                      <  SRR4302540.6155845/94‑1 (MQ=60)

                                                          TGGAATTTATTAGTAAGATGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTAT                                     <  SRR4302540.7623547/94‑1 (MQ=60)

                                                          TGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTAT                                     >  SRR4302540.5405201/1‑94 (MQ=60)

                                                          TGGAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTAT                                     >  SRR4302540.1852438/1‑94 (MQ=60)

                                                            GAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTC                                   >  SRR4302540.4119140/1‑94 (MQ=60)

                                                            GAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTC                                   >  SRR4302540.8977540/1‑94 (MQ=60)

                                                            GAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTC                                   <  SRR4302540.1241351/94‑1 (MQ=60)

                                                            GAATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTA                                   >  SRR4302540.5478400/1‑94 (MQ=60)

                                                             AATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCA                                  >  SRR4302540.8732790/1‑94 (MQ=60)

                                                             AATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCA                                  <  SRR4302540.3652118/94‑1 (MQ=60)

                                                             AATTTATTAGTAAGACGAGCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCA                                  <  SRR4302540.3651850/94‑1 (MQ=60)

                                                              ATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAA                                 >  SRR4302540.359239/1‑94 (MQ=60)

                                                              ATTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAA                                 <  SRR4302540.7485850/94‑1 (MQ=60)

                                                               TTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAG                                >  SRR4302540.5514403/1‑94 (MQ=60)

                                                               TTTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAG                                <  SRR4302540.4560378/94‑1 (MQ=60)

                                                                TTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGG                               <  SRR4302540.5093319/94‑1 (MQ=60)

                                                                TTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGG                               <  SRR4302540.1073763/94‑1 (MQ=60)

                                                                TTATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGG                               <  SRR4302540.3998108/94‑1 (MQ=60)

                                                                 TATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGT                              >  SRR4302540.1387662/1‑94 (MQ=60)

                                                                 TATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGT                              >  SRR4302540.1387664/1‑94 (MQ=60)

                                                                  ATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTT                             >  SRR4302540.7001240/1‑94 (MQ=60)

                                                                  ATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTT                             >  SRR4302540.7305904/1‑94 (MQ=60)

                                                                  ATTAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTT                             <  SRR4302540.3343214/94‑1 (MQ=60)

                                                                    TAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAT                           <  SRR4302540.221254/94‑1 (MQ=60)

                                                                    TAGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTAT                           <  SRR4302540.9860110/94‑1 (MQ=60)

                                                                     AGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATT                          >  SRR4302540.4377905/1‑94 (MQ=60)

                                                                     AGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATT                          <  SRR4302540.4477121/94‑1 (MQ=60)

                                                                     AGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATT                          <  SRR4302540.6774062/94‑1 (MQ=60)

                                                                     AGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATT                          <  SRR4302540.3617203/94‑1 (MQ=60)

                                                                     AGTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATT                          <  SRR4302540.6695135/94‑1 (MQ=60)

                                                                      GTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTG                         <  SRR4302540.2647080/94‑1 (MQ=60)

                                                                      GTAAGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTG                         >  SRR4302540.533056/1‑94 (MQ=60)

                                                                       TAAGACGATCCAGACGCATAACCCCTCCCATGACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGA                        <  SRR4302540.10143183/94‑1 (MQ=60)

                                                                        AAGACGTTCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGGCATCCTTCAATTATACAAGGTTATTGAC                       >  SRR4302540.9093855/1‑94 (MQ=60)

                                                                         AGACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGTCC                      >  SRR4302540.8794988/1‑94 (MQ=60)

                                                                           ACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAG                    >  SRR4302540.2543220/1‑94 (MQ=60)

                                                                           ACGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAG                    <  SRR4302540.3787252/94‑1 (MQ=60)

                                                                           ACGATCCAGACGCATAAC‑CCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAACTGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGA                   >  SRR4302540.6361505/1‑94 (MQ=60)

                                                                           ACGATCCAGACGCATAAC‑CCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGA                   >  SRR4302540.8479661/1‑94 (MQ=60)

                                                                            CGATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGA                   <  SRR4302540.9603090/94‑1 (MQ=60)

                                                                             GATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAT                  <  SRR4302540.38097/94‑1 (MQ=60)

                                                                             GATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGAT                  <  SRR4302540.6477480/94‑1 (MQ=60)

                                                                              ATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATT                 >  SRR4302540.2791492/1‑94 (MQ=60)

                                                                              ATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATT                 >  SRR4302540.207502/1‑94 (MQ=60)

                                                                              ATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATT                 <  SRR4302540.4127805/94‑1 (MQ=60)

                                                                              ATCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATT                 >  SRR4302540.8043560/1‑94 (MQ=60)

                                                                               TCCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTA                <  SRR4302540.8163253/94‑1 (MQ=60)

                                                                                CCAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATAAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAA               <  SRR4302540.1642881/94‑1 (MQ=60)

                                                                                 CAGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAT              <  SRR4302540.2569902/94‑1 (MQ=60)

                                                                                 CAGACGCATAACACCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAAT              >  SRR4302540.9995240/1‑94 (MQ=60)

                                                                                  AGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATG             >  SRR4302540.968740/1‑94 (MQ=60)

                                                                                  AGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATG             <  SRR4302540.6731768/94‑1 (MQ=60)

                                                                                  AGACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATG             >  SRR4302540.937310/1‑94 (MQ=60)

                                                                                    ACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTG           >  SRR4302540.9754892/1‑94 (MQ=60)

                                                                                    ACGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTG           >  SRR4302540.3018374/1‑94 (MQ=60)

                                                                                     CGCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGA          <  SRR4302540.5341579/94‑1 (MQ=60)

                                                                                      GCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAA         <  SRR4302540.5785886/94‑1 (MQ=60)

                                                                                      GCATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAA         >  SRR4302540.6002902/1‑94 (MQ=60)

                                                                                       CATAACCCCTCCCATAACGGATCAATGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAA        <  SRR4302540.7044427/94‑1 (MQ=60)

                                                                                       CATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAA        <  SRR4302540.7044426/94‑1 (MQ=60)

                                                                                        ATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAA       >  SRR4302540.7085916/1‑94 (MQ=60)

                                                                                        ATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAA       >  SRR4302540.3577794/1‑94 (MQ=60)

                                                                                        ATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAA       >  SRR4302540.1109122/1‑94 (MQ=60)

                                                                                        ATAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAA       >  SRR4302540.649612/1‑94 (MQ=60)

                                                                                         TAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAG      <  SRR4302540.3820958/94‑1 (MQ=60)

                                                                                         TAACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAG      >  SRR4302540.8788037/1‑94 (MQ=60)

                                                                                          AACCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGA     <  SRR4302540.3096287/94‑1 (MQ=60)

                                                                                          AACCCCTCCCATAACGGAGCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGA     <  SRR4302540.9731576/94‑1 (MQ=60)

                                                                                            CCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAA   >  SRR4302540.6687970/1‑94 (MQ=60)

                                                                                            CCCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAA   <  SRR4302540.698292/94‑1 (MQ=60)

                                                                                             CCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAA  >  SRR4302540.6979540/1‑94 (MQ=60)

                                                                                             CCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAA  >  SRR4302540.8746790/1‑94 (MQ=60)

TTCGATAAATTGGTTGTCGTGCCCGAGTGCAAGTGATTGGGCATCGGCAAGAGCAAGCTGGAATTTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAA  >  NC_000913/2732104‑2732290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`