Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,747,389	Δ1 bp	coding (572/591 nt)	b4540 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,747,388	0	C	.	99.7%	1710.8 / ‑4.0	377	coding (571/591 nt)	b4540	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/1); new base . (172/204); total (172/205)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 407 total aligned reads displayed.

CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGC  >  NC_000913/2747296‑2747476

 tttGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATct                                                                                         <  2:4554700/93‑2 (MQ=255)

   tGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTGGCAATCAGGATATGCTGCTGTCGGTGCTCGATctgg                                                                                       <  1:2560369/93‑4 (MQ=255)

        aaaGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTTCCGTCGCCATCAGGATATGCTGCTGTCGGCGCTCGCTCTGGGaaaa                                                                                  >  2:7128701/1‑93 (MQ=255)

        aaaGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGaaaaa                                                                                 >  1:4320797/1‑93 (MQ=255)

          agaagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAt                                                                               <  2:1082900/93‑1 (MQ=255)

          agaagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAt                                                                               >  1:752805/1‑93 (MQ=255)

          agaagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAt                                                                               <  1:9491197/93‑1 (MQ=255)

           gaagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATg                                                                              <  1:2409539/93‑1 (MQ=255)

           gaagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATg                                                                              <  2:7736805/93‑1 (MQ=255)

           gaagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATg                                                                              >  1:5270073/1‑93 (MQ=255)

            aagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGa                                                                             >  2:9104842/1‑93 (MQ=255)

            aagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGa                                                                             <  2:8080154/93‑1 (MQ=255)

             agagTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGAc                                                                            <  1:5919167/93‑1 (MQ=255)

              gagTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGAcc                                                                           <  1:9274734/93‑1 (MQ=255)

              gagTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGAcc                                                                           <  1:5501725/93‑1 (MQ=255)

                gTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGt                                                                         <  2:3530917/93‑1 (MQ=255)

                gTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGt                                                                         <  1:3962601/93‑1 (MQ=255)

                   gcgcACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTtga                                                                      <  2:3219218/93‑1 (MQ=255)

                   gcgcACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTtga                                                                      <  2:2530110/93‑1 (MQ=255)

                    cgcACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTtgat                                                                     <  1:3704160/93‑1 (MQ=255)

                     gcACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTtgatg                                                                    >  2:8171282/1‑93 (MQ=255)

                       aCTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAc                                                                  >  1:4586998/1‑93 (MQ=255)

                        cTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAca                                                                 >  2:6369861/1‑93 (MQ=255)

                          aTCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAcatc                                                               >  2:2169855/1‑93 (MQ=255)

                          aTCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAcatc                                                               >  2:3067460/1‑93 (MQ=255)

                            cGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAcatcat                                                             <  1:100980/93‑1 (MQ=255)

                            cGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAcatcat                                                             >  2:956823/1‑93 (MQ=255)

                              tGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATgg                                                           <  1:4939184/93‑1 (MQ=255)

                              tGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATgg                                                           >  2:1428725/1‑93 (MQ=255)

                               gCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGt                                                          <  1:7330787/93‑1 (MQ=255)

                               gCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGt                                                          <  1:9768350/93‑1 (MQ=255)

                               gCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGt                                                          >  2:131288/1‑93 (MQ=255)

                                  cGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGcc                                                       >  1:7144130/1‑93 (MQ=255)

                                  cGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGcc                                                       <  1:8393282/93‑1 (MQ=255)

                                  cGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGcc                                                       <  2:7475806/93‑1 (MQ=255)

                                    aaTCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCcgc                                                     <  2:8953824/93‑1 (MQ=255)

                                     aTCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCcgcg                                                    >  1:16409/1‑93 (MQ=255)

                                     aTCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCcgcg                                                    >  2:7592736/1‑93 (MQ=255)

                                       cACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCa                                                  >  1:9331505/1‑93 (MQ=255)

                                         cGCTCACAAATTTCCCGTCGCACTCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAGGACCGTTGATGACATCATGGTGCCGGGCAGt                                                <  2:4408321/93‑1 (MQ=255)

                                         cGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGt                                                <  1:3206666/93‑1 (MQ=255)

                                          gCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTg                                               <  2:5109443/93‑1 (MQ=255)

                                           cTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGa                                              >  2:4806931/1‑93 (MQ=255)

                                           cTCACAAATTTAACGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGTCGCGCACTGa                                              >  2:6947225/1‑93 (MQ=255)

                                            tCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGaa                                             <  1:8670951/93‑1 (MQ=255)

                                            tCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGaa                                             >  1:3536258/1‑93 (MQ=255)

                                              acaAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGCACGTTGATGACATCATGGTGCCGCGCAGTGACAt                                           >  2:8610211/1‑93 (MQ=255)

                                              acaAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAAt                                           >  2:968378/1‑93 (MQ=255)

                                               caAATTTCCCGTTGCAATCAGGATACGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAAtt                                          >  1:2982007/1‑93 (MQ=255)

                                               caAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAAtt                                          <  2:8582840/93‑1 (MQ=255)

                                                aaaTTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAAtca                                         >  2:1586648/1‑91 (MQ=255)

                                                aaaTTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTa                                         <  2:7343557/93‑1 (MQ=255)

                                                 aaTTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTAt                                        <  1:5692029/93‑1 (MQ=255)

                                                  aTTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATc                                       <  1:804318/93‑1 (MQ=255)

                                                    ttCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCgg                                     <  2:5732726/93‑1 (MQ=255)

                                                      cccGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTa                                   >  1:5771724/1‑93 (MQ=255)

                                                       ccGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTAt                                  >  2:1708835/1‑93 (MQ=255)

                                                       ccGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTAt                                  <  2:10013881/93‑1 (MQ=255)

                                                       ccGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTAt                                  <  2:2366481/93‑1 (MQ=255)

                                                         gTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTg                                >  2:3457896/1‑93 (MQ=255)

                                                          tCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGa                               <  2:4273618/93‑1 (MQ=255)

                                                           cGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGat                              <  2:6035234/93‑1 (MQ=255)

                                                            gCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGata                             <  2:9324150/93‑1 (MQ=255)

                                                            gCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGata                             >  1:4497560/1‑93 (MQ=255)

                                                             cAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGatat                            <  1:7834210/93‑1 (MQ=255)

                                                              aaTCAGTATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATc                           >  2:1908918/1‑93 (MQ=255)

                                                              aaTCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATc                           <  1:6896488/93‑1 (MQ=255)

                                                                tCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCaa                         >  1:5849677/1‑93 (MQ=255)

                                                                 cgggATAGGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAAc                        <  1:2915937/91‑1 (MQ=255)

                                                                   ggATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGa                      <  1:7725900/93‑1 (MQ=255)

                                                                   ggATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGa                      >  1:507634/1‑93 (MQ=255)

                                                                    gATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAt                     <  1:8230668/93‑1 (MQ=255)

                                                                    gATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAt                     <  2:6151618/93‑1 (MQ=255)

                                                                     atatGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATg                    >  2:5185242/1‑93 (MQ=255)

                                                                       atGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGAc                  <  2:4068075/93‑1 (MQ=255)

                                                                       atGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGAc                  >  2:5637557/1‑93 (MQ=255)

                                                                       atGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGAc                  >  2:3645774/1‑93 (MQ=255)

                                                                        tgctgcTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACt                 >  1:9113292/1‑93 (MQ=255)

                                                                         tctgctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTg                <  2:588829/92‑1 (MQ=255)

                                                                         gctgctGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTg                <  1:6430915/93‑1 (MQ=255)

                                                                          ctgctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTgg               <  1:5276122/93‑1 (MQ=255)

                                                                           tgctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGa              >  1:1479291/1‑93 (MQ=255)

                                                                           tgctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGa              >  2:2917043/1‑93 (MQ=255)

                                                                            gctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGaa             >  1:1245816/1‑93 (MQ=255)

                                                                            gctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGaa             >  1:2237043/1‑93 (MQ=255)

                                                                            gctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGaa             >  1:1913001/1‑93 (MQ=255)

                                                                             ctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGAGCCGGGCAGTGAAATTATCGGAATTGATATAAACGAAGACAGGaaa            >  2:8705283/1‑93 (MQ=255)

                                                                              tgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAt           <  2:2672667/93‑1 (MQ=255)

                                                                              tgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAt           >  2:3860067/1‑93 (MQ=255)

                                                                               gTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCTGTATTGATATCAACGATGACTGGAAATc          <  2:4654979/93‑1 (MQ=255)

                                                                               gTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATc          >  2:9417979/1‑93 (MQ=255)

                                                                                 cGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGa        <  2:5325867/93‑1 (MQ=255)

                                                                                  ggTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAt       >  1:8847683/1‑93 (MQ=255)

                                                                                  ggTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAt       >  2:8846412/1‑93 (MQ=255)

                                                                                   gTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAtt      >  2:8098123/1‑93 (MQ=255)

                                                                                   gTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAtt      >  1:9581252/1‑93 (MQ=255)

                                                                                   gTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAtt      >  2:4387757/1‑93 (MQ=255)

                                                                                     gCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCt    >  2:6505236/1‑93 (MQ=255)

                                                                                       tCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTgg  >  1:2134503/1‑92 (MQ=255)

                                                                                       tCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTgc  <  1:6738213/93‑1 (MQ=255)

CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGC  >  NC_000913/2747296‑2747476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 203 total aligned reads displayed.

CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC  >  NC_000913/2747296‑2747482

CTTTGAGCAAAGCATAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCT                                                                                               <  SRR4302540.5327718/94‑1 (MQ=60)

CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCT                                                                                               >  SRR4302540.9830126/1‑94 (MQ=60)

CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCT                                                                                               <  SRR4302540.2083675/94‑1 (MQ=60)

CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCT                                                                                               >  SRR4302540.7855285/1‑94 (MQ=60)

CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCT                                                                                               <  SRR4302540.5327717/94‑1 (MQ=60)

CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCT                                                                                               <  SRR4302540.5327716/94‑1 (MQ=60)

CTTTGAGAAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCT                                                                                               <  SRR4302540.8226125/94‑1 (MQ=60)

   TGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTGGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGA                                                                                           <  SRR4302540.2587973/94‑1 (MQ=60)

   TGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGA                                                                                           >  SRR4302540.2715029/1‑94 (MQ=60)

      GCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAA                                                                                        <  SRR4302540.9470966/94‑1 (MQ=60)

      GCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGCCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCTTGAAAA                                                                                         >  SRR4302540.7770544/1‑94 (MQ=60)

       CAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAA                                                                                       >  SRR4302540.4367838/1‑94 (MQ=60)

        AAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGGTGTCGGTGCTCGAT‑CTGGAAAAAA                                                                                      >  SRR4302540.1635937/1‑94 (MQ=60)

        AAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAA                                                                                      >  SRR4302540.1635936/1‑94 (MQ=60)

        AAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAA                                                                                      >  SRR4302540.5755704/1‑94 (MQ=60)

        AAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAA                                                                                      <  SRR4302540.6284746/94‑1 (MQ=60)

         AAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAT                                                                                     >  SRR4302540.9398785/1‑94 (MQ=60)

         AAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAT                                                                                     <  SRR4302540.948872/94‑1 (MQ=60)

         AAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAT                                                                                     >  SRR4302540.560166/1‑94 (MQ=60)

         AAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAT                                                                                     >  SRR4302540.760826/1‑94 (MQ=60)

          AGAAGAGTTGCGCTCTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATG                                                                                    <  SRR4302540.33017/94‑1 (MQ=60)

          AGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATG                                                                                    <  SRR4302540.9603705/94‑1 (MQ=60)

          AGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATG                                                                                    <  SRR4302540.33016/94‑1 (MQ=60)

          AGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATG                                                                                    <  SRR4302540.8000940/94‑1 (MQ=60)

          AGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATG                                                                                    >  SRR4302540.5327600/1‑94 (MQ=60)

           GAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGA                                                                                   <  SRR4302540.4158329/94‑1 (MQ=60)

           GAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGA                                                                                   <  SRR4302540.2435515/94‑1 (MQ=60)

           GAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGA                                                                                   >  SRR4302540.8776496/1‑94 (MQ=60)

            AAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGAC                                                                                  >  SRR4302540.7711216/1‑94 (MQ=60)

             AGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACC                                                                                 <  SRR4302540.5984558/94‑1 (MQ=60)

             AGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTACCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACC                                                                                 <  SRR4302540.5984556/94‑1 (MQ=60)

              GAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCG                                                                                <  SRR4302540.9385623/94‑1 (MQ=60)

              GAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCG                                                                                <  SRR4302540.5562320/94‑1 (MQ=60)

              GAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCG                                                                                <  SRR4302540.2438050/94‑1 (MQ=60)

              GAGTTGATCACTATCGTGCAAGAATCACGCTCTCAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCG                                                                                <  SRR4302540.9385624/94‑1 (MQ=60)

               AGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGT                                                                               >  SRR4302540.4462617/1‑94 (MQ=60)

               AGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGT                                                                               >  SRR4302540.2941644/1‑94 (MQ=60)

                GTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTT                                                                              <  SRR4302540.4005334/94‑1 (MQ=60)

                GTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTT                                                                              >  SRR4302540.683686/1‑94 (MQ=60)

                GTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTT                                                                              <  SRR4302540.3002729/94‑1 (MQ=60)

                 TTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTG                                                                             <  SRR4302540.5178788/94‑1 (MQ=60)

                   GCGCACTATCGTGCACGAATCACGCGCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGAT                                                                           <  SRR4302540.681090/94‑1 (MQ=60)

                    CGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATG                                                                          <  SRR4302540.3744597/94‑1 (MQ=60)

                    CGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATG                                                                          <  SRR4302540.5108980/94‑1 (MQ=60)

                    CGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATG                                                                          <  SRR4302540.3009510/94‑1 (MQ=60)

                     GCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGA                                                                         >  SRR4302540.5962306/1‑94 (MQ=60)

                     GCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGA                                                                         >  SRR4302540.7951079/1‑94 (MQ=60)

                      CACTATCGTGCCCGAATCACGCTCACCAATTTCCCGTCGCAATCAGGATCTGCCGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGACGAC                                                                        >  SRR4302540.859247/1‑94 (MQ=60)

                      CACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAC                                                                        <  SRR4302540.5675289/94‑1 (MQ=60)

                      CACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAC                                                                        >  SRR4302540.4636400/1‑94 (MQ=60)

                       ACTATCGTGCACGAATCACGCTCACCAATTTCCCGTCGCCATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGCCCTTTGATGACA                                                                       >  SRR4302540.6558160/1‑94 (MQ=60)

                       ACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACA                                                                       >  SRR4302540.3006479/1‑94 (MQ=60)

                       ACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACA                                                                       <  SRR4302540.4724278/94‑1 (MQ=60)

                        CTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACAT                                                                      >  SRR4302540.2462868/1‑94 (MQ=60)

                        CTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACAT                                                                      <  SRR4302540.7446076/94‑1 (MQ=60)

                        CTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACAT                                                                      <  SRR4302540.83174/94‑1 (MQ=60)

                         TATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATC                                                                     <  SRR4302540.8637487/94‑1 (MQ=60)

                          ATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCA                                                                    <  SRR4302540.3853354/94‑1 (MQ=60)

                           TCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCAT                                                                   <  SRR4302540.8916002/94‑1 (MQ=60)

                           TCGTACACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCAT                                                                   <  SRR4302540.5070625/94‑1 (MQ=60)

                            CGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATG                                                                  <  SRR4302540.102052/94‑1 (MQ=60)

                            CGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATG                                                                  <  SRR4302540.1975075/94‑1 (MQ=60)

                             GTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGG                                                                 <  SRR4302540.9476354/94‑1 (MQ=60)

                             GTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGG                                                                 >  SRR4302540.7734696/1‑94 (MQ=60)

                              TGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGT                                                                <  SRR4302540.3851871/94‑1 (MQ=60)

                              TGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGT                                                                <  SRR4302540.7109663/94‑1 (MQ=60)

                              TGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGT                                                                <  SRR4302540.7284357/94‑1 (MQ=60)

                              TGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGT                                                                <  SRR4302540.5421407/94‑1 (MQ=60)

                              TGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGT                                                                <  SRR4302540.4992484/94‑1 (MQ=60)

                               GCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTG                                                               <  SRR4302540.9882893/94‑1 (MQ=60)

                               GCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTG                                                               >  SRR4302540.2238578/1‑94 (MQ=60)

                               GCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTG                                                               <  SRR4302540.7412628/94‑1 (MQ=60)

                                CACGAATCACGCTCTCAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGC                                                              >  SRR4302540.9175752/1‑94 (MQ=60)

                                CACGAATCACGCTCACAAATTTCCTGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGC                                                              <  SRR4302540.8692281/94‑1 (MQ=60)

                                CACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGC                                                              >  SRR4302540.2244650/1‑94 (MQ=60)

                                 ACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCC                                                             >  SRR4302540.7223729/1‑94 (MQ=60)

                                 ACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCC                                                             <  SRR4302540.2142768/94‑1 (MQ=60)

                                  CGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCG                                                            <  SRR4302540.8490684/94‑1 (MQ=60)

                                   GAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGC                                                           <  SRR4302540.8796957/94‑1 (MQ=60)

                                   GAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGC                                                           >  SRR4302540.2361770/1‑94 (MQ=60)

                                   GAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGC                                                           >  SRR4302540.1383355/1‑94 (MQ=60)

                                    AATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCG                                                          >  SRR4302540.5132666/1‑94 (MQ=60)

                                    AATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCG                                                          >  SRR4302540.16591/1‑94 (MQ=60)

                                    AATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCG                                                          >  SRR4302540.4450280/1‑94 (MQ=60)

                                      TCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCA                                                        >  SRR4302540.9442768/1‑94 (MQ=60)

                                      TCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCA                                                        <  SRR4302540.1381101/94‑1 (MQ=60)

                                       CACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAG                                                       <  SRR4302540.9210670/94‑1 (MQ=60)

                                       CACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAG                                                       >  SRR4302540.488639/1‑94 (MQ=60)

                                        ACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGT                                                      <  SRR4302540.5104799/94‑1 (MQ=60)

                                         CGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTG                                                     <  SRR4302540.3241487/94‑1 (MQ=60)

                                         CGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTG                                                     >  SRR4302540.1751786/1‑94 (MQ=60)

                                         CGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTG                                                     >  SRR4302540.7822765/1‑94 (MQ=60)

                                           CTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAA                                                   >  SRR4302540.8213235/1‑94 (MQ=60)

                                           CTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAA                                                   >  SRR4302540.9559633/1‑94 (MQ=60)

                                           CTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAA                                                   >  SRR4302540.3574869/1‑94 (MQ=60)

                                           CTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAA                                                   <  SRR4302540.4633103/94‑1 (MQ=60)

                                           CTCACAAAGTTCTCGTCGCCATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAA                                                   <  SRR4302540.4633104/94‑1 (MQ=60)

                                            TCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAA                                                  <  SRR4302540.8771667/94‑1 (MQ=60)

                                             CACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAAT                                                 <  SRR4302540.1755675/94‑1 (MQ=60)

                                              ACAAATTTCCCGTTGCAATCAGGATACGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATT                                                >  SRR4302540.3014927/1‑94 (MQ=60)

                                               CAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTA                                               <  SRR4302540.2180074/94‑1 (MQ=60)

                                                AAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTAT                                              <  SRR4302540.7948767/94‑1 (MQ=60)

                                                AAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTAT                                              <  SRR4302540.2425241/94‑1 (MQ=60)

                                                 AATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATC                                             <  SRR4302540.5754692/94‑1 (MQ=60)

                                                 AATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATC                                             >  SRR4302540.2506234/1‑94 (MQ=60)

                                                 AATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATC                                             <  SRR4302540.9266337/94‑1 (MQ=60)

                                                  ATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCG                                            <  SRR4302540.812861/94‑1 (MQ=60)

                                                  ATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCG                                            <  SRR4302540.3872866/94‑1 (MQ=60)

                                                    TTCCGCTCGCAATCAGGATATGCTGCTGTCGGTTCTCGAT‑CTGGAAAAAATGACCGTTGATGACGTCATGGTGCCGCGCAGTGAAATTATCGGT                                          <  SRR4302540.3883693/94‑1 (MQ=60)

                                                    TTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGT                                          >  SRR4302540.9249969/1‑94 (MQ=60)

                                                     TCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTA                                         >  SRR4302540.5835472/1‑94 (MQ=60)

                                                     TCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTA                                         >  SRR4302540.6350220/1‑94 (MQ=60)

                                                      CCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTAT                                        <  SRR4302540.9613229/94‑1 (MQ=60)

                                                        CGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGCCATCATGGTGCCGCGCAGGGAATTTATCGGTATTG                                      >  SRR4302540.5871398/1‑94 (MQ=60)

                                                        CGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAACTTATCGGTATTG                                      >  SRR4302540.7482888/1‑94 (MQ=60)

                                                        CGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTG                                      >  SRR4302540.5897859/1‑94 (MQ=60)

                                                         GTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTTCCGCGCAGTGAAATTATCGGTATTGA                                     <  SRR4302540.10086628/94‑1 (MQ=60)

                                                         GTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGA                                     >  SRR4302540.6521357/1‑94 (MQ=60)

                                                         GTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGA                                     >  SRR4302540.6521359/1‑94 (MQ=60)

                                                          TCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGAT                                    <  SRR4302540.5360204/94‑1 (MQ=60)

                                                           CGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATA                                   >  SRR4302540.311134/1‑94 (MQ=60)

                                                           CGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATA                                   >  SRR4302540.9694300/1‑94 (MQ=60)

                                                           CGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATA                                   >  SRR4302540.4546318/1‑94 (MQ=60)

                                                            GCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATAT                                  <  SRR4302540.6871485/94‑1 (MQ=60)

                                                             CAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATC                                 <  SRR4302540.7925748/94‑1 (MQ=60)

                                                             CAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATC                                 <  SRR4302540.4423582/94‑1 (MQ=60)

                                                              AATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCA                                >  SRR4302540.9416253/1‑94 (MQ=60)

                                                              AATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCA                                <  SRR4302540.6973033/94‑1 (MQ=60)

                                                               ATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAA                               >  SRR4302540.5914374/1‑94 (MQ=60)

                                                                TCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAAC                              >  SRR4302540.5870407/1‑94 (MQ=60)

                                                                TCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAAC                              <  SRR4302540.8467263/94‑1 (MQ=60)

                                                                TCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAAC                              <  SRR4302540.9673936/94‑1 (MQ=60)

                                                                ACAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAAC                              <  SRR4302540.261027/94‑1 (MQ=60)

                                                                 CGGGATAGGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACG                             <  SRR4302540.2947840/94‑1 (MQ=60)

                                                                 CAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACG                             >  SRR4302540.5695869/1‑94 (MQ=60)

                                                                 CAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACG                             >  SRR4302540.5978398/1‑94 (MQ=60)

                                                                 CAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACG                             >  SRR4302540.4068753/1‑94 (MQ=60)

                                                                  AGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGA                            >  SRR4302540.513075/1‑94 (MQ=60)

                                                                  AGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGA                            <  SRR4302540.3584535/94‑1 (MQ=60)

                                                                   GGATATTCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT                           <  SRR4302540.845363/94‑1 (MQ=60)

                                                                   GGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT                           <  SRR4302540.373796/94‑1 (MQ=60)

                                                                   GGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT                           <  SRR4302540.9886387/94‑1 (MQ=60)

                                                                   GGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT                           <  SRR4302540.7816083/94‑1 (MQ=60)

                                                                   GGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT                           <  SRR4302540.7086365/94‑1 (MQ=60)

                                                                    GATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATG                          <  SRR4302540.1655115/94‑1 (MQ=60)

                                                                    GATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATG                          <  SRR4302540.8326341/94‑1 (MQ=60)

                                                                    GATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATG                          >  SRR4302540.5179275/1‑94 (MQ=60)

                                                                    GATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATG                          >  SRR4302540.2303437/1‑94 (MQ=60)

                                                                     ATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGA                         >  SRR4302540.6931383/1‑94 (MQ=60)

                                                                     ATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGA                         <  SRR4302540.7522228/94‑1 (MQ=60)

                                                                     ATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATAAACGATGA                         >  SRR4302540.5791642/1‑94 (MQ=60)

                                                                      TATGGTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGAC                        <  SRR4302540.1169110/94‑1 (MQ=60)

                                                                      TATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGAC                        <  SRR4302540.7890860/94‑1 (MQ=60)

                                                                       ATGCTGCTGTCGGTGCTCGAT‑CTGGAAACAATGCCCGTTGATGACCTAATGGTGCCGggcctggaaatgctcggtatttatatcaacaatgacg                       >  SRR4302540.9222815/1‑57 (MQ=24)

                                                                       ATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACT                       >  SRR4302540.430058/1‑94 (MQ=60)

                                                                       ATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACT                       >  SRR4302540.9222816/1‑94 (MQ=60)

                                                                         GCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGG                     <  SRR4302540.6502494/94‑1 (MQ=60)

                                                                         GCTGCTGTCGGTGCTCGAT‑CAGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGG                     >  SRR4302540.9853201/1‑94 (MQ=60)

                                                                          CTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGA                    <  SRR4302540.5333729/94‑1 (MQ=60)

                                                                          CTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGA                    >  SRR4302540.1495489/1‑94 (MQ=60)

                                                                           TGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAA                   >  SRR4302540.1258525/1‑94 (MQ=60)

                                                                           TGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAA                   >  SRR4302540.2261103/1‑94 (MQ=60)

                                                                           TGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAA                   >  SRR4302540.1933892/1‑94 (MQ=60)

                                                                             CTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAT                 >  SRR4302540.1247384/1‑94 (MQ=60)

                                                                              TGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATC                <  SRR4302540.3452032/94‑1 (MQ=60)

                                                                              TGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATC                <  SRR4302540.5808468/94‑1 (MQ=60)

                                                                              TGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATC                <  SRR4302540.7286602/94‑1 (MQ=60)

                                                                              TGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATC                <  SRR4302540.5405876/94‑1 (MQ=60)

                                                                               GTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCG               <  SRR4302540.1932614/94‑1 (MQ=60)

                                                                                TCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGA              <  SRR4302540.8324356/94‑1 (MQ=60)

                                                                                 CGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAT             >  SRR4302540.8950033/1‑94 (MQ=60)

                                                                                 CGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAT             <  SRR4302540.8619595/94‑1 (MQ=60)

                                                                                 CGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAT             <  SRR4302540.9245249/94‑1 (MQ=60)

                                                                                 CGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAT             >  SRR4302540.7078460/1‑94 (MQ=60)

                                                                                  GGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATT            >  SRR4302540.9694393/1‑94 (MQ=60)

                                                                                  GGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATT            <  SRR4302540.3217894/94‑1 (MQ=60)

                                                                                   GTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTC           <  SRR4302540.9730553/94‑1 (MQ=60)

                                                                                   GTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTC           <  SRR4302540.4621455/94‑1 (MQ=60)

                                                                                    TGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCT          <  SRR4302540.1428970/94‑1 (MQ=60)

                                                                                    TGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATAACAACGATGACTGGAAATCGATTCT          <  SRR4302540.320267/94‑1 (MQ=60)

                                                                                     GCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTG         >  SRR4302540.498980/1‑94 (MQ=60)

                                                                                      CTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGG        >  SRR4302540.2157414/1‑94 (MQ=60)

                                                                                       TCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCG       <  SRR4302540.3586205/94‑1 (MQ=60)

                                                                                       TCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCG       <  SRR4302540.6812647/94‑1 (MQ=60)

                                                                                        CGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGC      >  SRR4302540.9776268/1‑94 (MQ=60)

                                                                                        CGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAGGACTGGAAATCGATTCTGCTC      >  SRR4302540.3559232/1‑94 (MQ=60)

                                                                                         GAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCC     <  SRR4302540.146372/94‑1 (MQ=60)

                                                                                           atCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCA    <  SRR4302540.210158/92‑1 (MQ=60)

                                                                                            TCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAA   >  SRR4302540.5725315/1‑94 (MQ=60)

                                                                                            TCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAA   <  SRR4302540.2294057/94‑1 (MQ=60)

                                                                                            TCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAA   >  SRR4302540.1859496/1‑94 (MQ=60)

                                                                                             CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGCCTGGAAATCGAGTCTGCCCCAAC  >  SRR4302540.2989892/1‑94 (MQ=60)

                                                                                             CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC  >  SRR4302540.1746651/1‑94 (MQ=60)

                                                                                             CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC  <  SRR4302540.7886175/94‑1 (MQ=60)

                                                                                             CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC  <  SRR4302540.7852170/94‑1 (MQ=60)

                                                                                             CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC  >  SRR4302540.8118946/1‑94 (MQ=60)

                                                                                             CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC  <  SRR4302540.9428565/94‑1 (MQ=60)

                                                                                             CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC  >  SRR4302540.5369307/1‑94 (MQ=60)

                                                                                             CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC  >  SRR4302540.897798/1‑94 (MQ=60)

                                                                                             CTGGAAAAAATGACCGTTGATGACATCATGGTGCAGCGCAGTGAACTTATCGGTATTGAAGTCAACGATGACTGGAAATCGATTATGCGCCAAC  >  SRR4302540.5047500/1‑94 (MQ=60)

CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC  >  NC_000913/2747296‑2747482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`