Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,753,655	T→C	intergenic (+256/‑525)	smpB → / → intA	small protein B/prophage CP4‑57 integrase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,753,655	0	T	C	99.8%	1294.3 / NA	405	intergenic (+256/‑525)	smpB/intA	small protein B/prophage CP4‑57 integrase
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (150/254); minor base A (1/0); total (151/254)
Fisher's exact test for biased strand distribution p-value = 3.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 418 total aligned reads displayed.

GAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT  >  NC_000913/2753565‑2753744

 aGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCa                                                                                        <  2:4967794/93‑1 (MQ=255)

 aGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCa                                                                                        <  1:5605005/93‑1 (MQ=255)

 aGGCTGGTCATGGCACTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCa                                                                                        <  1:5524118/93‑1 (MQ=255)

  ggCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAt                                                                                       <  1:7984516/93‑1 (MQ=255)

  ggCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAt                                                                                       <  2:5583392/93‑1 (MQ=255)

  ggCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCAGAACCCAAGGCGCAt                                                                                       >  1:3711206/1‑93 (MQ=255)

    gtGGGCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGc                                                                                     <  2:8416133/92‑1 (MQ=255)

     tGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGcc                                                                                    <  1:9465959/93‑1 (MQ=255)

       gTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGa                                                                                  <  2:3323377/93‑1 (MQ=255)

       gTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGa                                                                                  <  2:7154474/93‑1 (MQ=255)

       gTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGa                                                                                  <  2:1035758/93‑1 (MQ=255)

        tCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAg                                                                                 <  2:292097/93‑1 (MQ=255)

         cATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAgg                                                                                <  1:9286610/93‑1 (MQ=255)

          aTGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAggg                                                                               >  2:4239416/1‑93 (MQ=255)

          aTGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAggg                                                                               <  2:1599882/93‑1 (MQ=255)

           tGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAgggg                                                                              <  1:2142571/93‑1 (MQ=255)

           tGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAgggg                                                                              >  2:2376077/1‑93 (MQ=255)

           tGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAgggg                                                                              >  2:6022740/1‑93 (MQ=255)

           tGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAgggg                                                                              >  1:1000840/1‑93 (MQ=255)

             gcgcTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCg                                                                            <  1:8945693/93‑1 (MQ=255)

               gcTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGt                                                                          <  2:6635889/93‑1 (MQ=255)

                cTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGtt                                                                         >  1:1423188/1‑93 (MQ=255)

                 tCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTg                                                                        >  1:2065071/1‑93 (MQ=255)

                 tCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTg                                                                        >  2:4510006/1‑93 (MQ=255)

                  cATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGCTTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTgg                                                                       >  1:5828402/1‑93 (MQ=255)

                  cATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTgg                                                                       >  2:6791204/1‑93 (MQ=255)

                  cATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTgg                                                                       >  1:1921987/1‑93 (MQ=255)

                   aTAAATCTGGTATACTTACCGTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGc                                                                      <  1:8496895/93‑1 (MQ=255)

                    tAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGcc                                                                     <  2:4752319/93‑1 (MQ=255)

                     aaaTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCt                                                                    <  2:4387418/93‑1 (MQ=255)

                     aaaTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCt                                                                    <  2:5095397/93‑1 (MQ=255)

                     aaaTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCt                                                                    <  2:4207802/93‑1 (MQ=255)

                          tGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTaa                                                               >  1:5354401/1‑93 (MQ=255)

                           ggTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTaaa                                                              >  1:4303354/1‑93 (MQ=255)

                           ggTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTATGCCTCGTaga                                                              >  2:3643629/1‑91 (MQ=255)

                            gTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTaaaa                                                             >  2:9201714/1‑93 (MQ=255)

                               taCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGc                                                          >  2:3824849/1‑93 (MQ=255)

                               taCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGc                                                          >  1:8825988/1‑93 (MQ=255)

                               taCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGc                                                          >  1:4961374/1‑93 (MQ=255)

                                 cTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCg                                                        >  1:2400234/1‑93 (MQ=255)

                                 cTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCCTAAAAACCCg                                                        >  1:2553638/1‑93 (MQ=255)

                                   tACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGGCTCGTAAAAAGCCGCa                                                      >  2:8879495/1‑93 (MQ=255)

                                   tACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCa                                                      >  2:9805081/1‑93 (MQ=255)

                                    aCCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaa                                                     <  1:8058250/93‑1 (MQ=255)

                                    aCCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaa                                                     >  2:7892422/1‑93 (MQ=255)

                                     ccTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaa                                                    >  1:9078745/1‑93 (MQ=255)

                                      cTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaaa                                                   >  1:9624372/1‑93 (MQ=255)

                                        ttACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaaaaa                                                 >  2:8813551/1‑93 (MQ=255)

                                         tACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAAt                                                <  2:6458005/93‑1 (MQ=255)

                                         tACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAAt                                                >  2:1261964/1‑93 (MQ=255)

                                          acacATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATa                                               <  2:7490579/93‑1 (MQ=255)

                                          acacATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATa                                               <  1:6980136/93‑1 (MQ=255)

                                             caTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTc                                            >  2:9682120/1‑93 (MQ=255)

                                             caTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTc                                            >  2:806002/1‑93 (MQ=255)

                                             caTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTc                                            <  2:8306973/93‑1 (MQ=255)

                                              aTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCg                                           >  2:132720/1‑93 (MQ=255)

                                               atGGGGCCGATTCTGGATTCGACTGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGc                                          <  1:8577285/92‑1 (MQ=255)

                                                 ggggCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCaa                                        <  2:7265867/93‑1 (MQ=255)

                                                  gggCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCaaa                                       >  2:3448720/1‑93 (MQ=255)

                                                  gggCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCaaa                                       <  1:296444/93‑1 (MQ=255)

                                                  gggCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCaaa                                       <  2:401843/93‑1 (MQ=255)

                                                  gggCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCaaa                                       <  2:867144/93‑1 (MQ=255)

                                                  gggCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCaaa                                       >  2:2940942/1‑93 (MQ=255)

                                                    gCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAacg                                     <  1:6330629/93‑1 (MQ=255)

                                                     gtGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAacga                                    <  2:3068085/92‑1 (MQ=255)

                                                     gtGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAacga                                    <  1:7273108/92‑1 (MQ=255)

                                                     cTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAacga                                    >  2:2335776/1‑93 (MQ=255)

                                                        aTTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAAcgacga                                 <  1:3630046/93‑1 (MQ=255)

                                                         ttCTGTACTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGTCGTTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaa                                <  1:344178/93‑1 (MQ=255)

                                                           cTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaaaa                              <  2:7649869/93‑1 (MQ=255)

                                                           cTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaaaa                              <  2:9516468/93‑1 (MQ=255)

                                                            tGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAc                             <  1:5466188/93‑1 (MQ=255)

                                                            tGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAc                             <  1:5945608/93‑1 (MQ=255)

                                                              gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa                           <  2:1922260/93‑1 (MQ=255)

                                                              gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa                           <  1:2908304/93‑1 (MQ=255)

                                                              gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa                           <  1:3138548/93‑1 (MQ=255)

                                                              gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa                           <  1:1754697/93‑1 (MQ=255)

                                                              gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa                           <  2:623761/93‑1 (MQ=255)

                                                               aTTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTAc                          <  2:8247902/93‑1 (MQ=255)

                                                               aTTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTAc                          <  1:8750401/93‑1 (MQ=255)

                                                               aTTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTAc                          <  1:1169399/93‑1 (MQ=255)

                                                                 tCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGc                        <  1:9166566/93‑1 (MQ=255)

                                                                    aCGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCttt                     <  1:4103211/93‑1 (MQ=255)

                                                                     cGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTa                    >  1:7633683/1‑93 (MQ=255)

                                                                      gggATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTag                   <  2:5397047/93‑1 (MQ=255)

                                                                        gATTTGCGAACCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagca                 <  2:6930473/93‑1 (MQ=255)

                                                                         aTTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagcag                <  1:6843559/93‑1 (MQ=255)

                                                                         aTTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagcag                <  1:7495953/93‑1 (MQ=255)

                                                                              cGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaa           <  1:6235385/93‑1 (MQ=255)

                                                                               gAAACCCAAGGCGCATGCCGAGGGGCGGTTTGCCTTGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaat          <  1:7144646/93‑1 (MQ=255)

                                                                               gAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaat          <  1:1226067/93‑1 (MQ=255)

                                                                                aaaCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaata         >  2:4632063/1‑93 (MQ=255)

                                                                                 aaCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaataa        >  1:5074520/1‑93 (MQ=255)

                                                                                   cccAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAAcc      <  1:4823368/93‑1 (MQ=255)

                                                                                     cAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTg    <  1:1663547/93‑1 (MQ=255)

                                                                                      aaGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGc   <  1:6437327/93‑1 (MQ=255)

                                                                                       aGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCt  >  1:270246/1‑93 (MQ=255)

                                                                                       aGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCt  <  2:2680934/93‑1 (MQ=255)

                                                                                       aGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCt  >  2:1154469/1‑93 (MQ=255)

                                                                                       aGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCt  <  1:418765/93‑1 (MQ=255)

GAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT  >  NC_000913/2753565‑2753744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 222 total aligned reads displayed.

ATTGAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCTTAGA  >  NC_000913/2753562‑2753748

ATTGAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGC                                                                                               >  SRR4302540.10099315/1‑94 (MQ=60)

ATTGAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGC                                                                                               >  SRR4302540.4653305/1‑94 (MQ=60)

ATTGAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGC                                                                                               >  SRR4302540.1336995/1‑94 (MQ=60)

 TTGAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTCCCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCG                                                                                              <  SRR4302540.4775001/94‑1 (MQ=60)

 TTGAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTCCACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCG                                                                                              <  SRR4302540.815666/94‑1 (MQ=60)

    AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAT                                                                                           <  SRR4302540.5371374/94‑1 (MQ=60)

    AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAT                                                                                           <  SRR4302540.5628923/94‑1 (MQ=60)

    AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAT                                                                                           <  SRR4302540.5666673/94‑1 (MQ=60)

    AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAT                                                                                           <  SRR4302540.1185281/94‑1 (MQ=60)

    AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAT                                                                                           >  SRR4302540.6701708/1‑94 (MQ=60)

    AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAT                                                                                           <  SRR4302540.9193361/94‑1 (MQ=60)

    AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAT                                                                                           >  SRR4302540.1992013/1‑94 (MQ=60)

    AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAT                                                                                           >  SRR4302540.9007659/1‑94 (MQ=60)

    AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCAGAACCCAAGGCGCAT                                                                                           >  SRR4302540.3751706/1‑94 (MQ=60)

    AGGCTGGTCATGGCACTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAT                                                                                           <  SRR4302540.5584946/94‑1 (MQ=60)

       CTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCC                                                                                        <  SRR4302540.8088632/94‑1 (MQ=60)

        TGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCG                                                                                       >  SRR4302540.2728610/1‑94 (MQ=60)

        TGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCG                                                                                       <  SRR4302540.9578255/94‑1 (MQ=60)

        TGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCG                                                                                       >  SRR4302540.1758833/1‑94 (MQ=60)

           TCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGG                                                                                    >  SRR4302540.3291679/1‑94 (MQ=60)

           TCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGG                                                                                    <  SRR4302540.2324735/94‑1 (MQ=60)

           TCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGG                                                                                    >  SRR4302540.3291678/1‑94 (MQ=60)

            cctcgcgctcataaattcagtatacctgcctttaccccTTGGGGCTGATTCTCGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGG                                                                                   <  SRR4302540.1757394/56‑1 (MQ=60)

            CCTGGCCCTCATAAATCTGGTATACTTACCTGTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGG                                                                                   <  SRR4302540.2115535/94‑1 (MQ=60)

            CATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGG                                                                                   <  SRR4302540.8810826/94‑1 (MQ=60)

            CATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGG                                                                                   <  SRR4302540.9397585/94‑1 (MQ=60)

            CATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGG                                                                                   <  SRR4302540.2115534/94‑1 (MQ=60)

             ATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGG                                                                                  >  SRR4302540.1011003/1‑94 (MQ=60)

              TGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGC                                                                                 <  SRR4302540.2165597/94‑1 (MQ=60)

               GGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCG                                                                                >  SRR4302540.300004/1‑94 (MQ=60)

                GCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGG                                                                               <  SRR4302540.9050915/94‑1 (MQ=60)

                 CGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGT                                                                              <  SRR4302540.2876056/94‑1 (MQ=60)

                 CGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGT                                                                              >  SRR4302540.8721042/1‑94 (MQ=60)

                  GCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTT                                                                             <  SRR4302540.5103739/94‑1 (MQ=60)

                  GCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTT                                                                             <  SRR4302540.8814698/94‑1 (MQ=60)

                  GCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTT                                                                             <  SRR4302540.722349/94‑1 (MQ=60)

                  GCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTT                                                                             >  SRR4302540.1438595/1‑94 (MQ=60)

                  CCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTT                                                                             <  SRR4302540.7296558/94‑1 (MQ=60)

                   CTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTG                                                                            >  SRR4302540.2087292/1‑94 (MQ=60)

                   CTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTG                                                                            >  SRR4302540.4565235/1‑94 (MQ=60)

                   CTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTG                                                                            >  SRR4302540.9205136/1‑94 (MQ=60)

                    TCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGCTTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGG                                                                           >  SRR4302540.5892838/1‑94 (MQ=60)

                    TCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGG                                                                           >  SRR4302540.1942947/1‑94 (MQ=60)

                    TCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGG                                                                           >  SRR4302540.5892844/1‑94 (MQ=60)

                     CATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGC                                                                          >  SRR4302540.1298256/1‑94 (MQ=60)

                     CATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGC                                                                          <  SRR4302540.8410488/94‑1 (MQ=60)

                      ATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCC                                                                         >  SRR4302540.9580122/1‑94 (MQ=60)

                      ATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCC                                                                         >  SRR4302540.7665470/1‑94 (MQ=60)

                      ATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCC                                                                         <  SRR4302540.1845315/94‑1 (MQ=60)

                      ATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTGGGCC                                                                         >  SRR4302540.7665469/1‑94 (MQ=60)

                      ATAAATCTGGTATACTTACCGTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCC                                                                         <  SRR4302540.8595623/94‑1 (MQ=60)

                        AAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTC                                                                       <  SRR4302540.7923088/94‑1 (MQ=60)

                        AAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTC                                                                       <  SRR4302540.1796820/94‑1 (MQ=60)

                          ATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGT                                                                     <  SRR4302540.5544087/94‑1 (MQ=60)

                          ATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGT                                                                     <  SRR4302540.5389912/94‑1 (MQ=60)

                            CTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAA                                                                   >  SRR4302540.1190158/1‑94 (MQ=60)

                            CTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAA                                                                   <  SRR4302540.544483/94‑1 (MQ=60)

                            CTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAA                                                                   >  SRR4302540.5413196/1‑94 (MQ=60)

                             TGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAA                                                                  <  SRR4302540.670854/94‑1 (MQ=60)

                             TGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAA                                                                  >  SRR4302540.4350190/1‑94 (MQ=60)

                               GTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAA                                                                <  SRR4302540.7977900/94‑1 (MQ=60)

                                 ATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGC                                                              >  SRR4302540.8928054/1‑94 (MQ=60)

                                 ATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGC                                                              >  SRR4302540.5015016/1‑94 (MQ=60)

                                 ATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGC                                                              >  SRR4302540.2441197/1‑94 (MQ=60)

                                   TCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCG                                                            <  SRR4302540.7354138/94‑1 (MQ=60)

                                   ACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCG                                                            <  SRR4302540.4995207/94‑1 (MQ=60)

                                   ACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCG                                                            >  SRR4302540.9828066/1‑94 (MQ=60)

                                   ACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCCTAAAAACCCG                                                            >  SRR4302540.2581157/1‑94 (MQ=60)

                                    CTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTTCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGC                                                           >  SRR4302540.7006833/1‑94 (MQ=60)

                                    CTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGC                                                           <  SRR4302540.3700881/94‑1 (MQ=60)

                                    CTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGC                                                           >  SRR4302540.2346696/1‑94 (MQ=60)

                                     TTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCA                                                          <  SRR4302540.5912750/94‑1 (MQ=60)

                                     TTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCA                                                          >  SRR4302540.5456621/1‑94 (MQ=60)

                                     TTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCA                                                          >  SRR4302540.7857017/1‑94 (MQ=60)

                                      TACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAA                                                         <  SRR4302540.9555843/94‑1 (MQ=60)

                                       TCCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAA                                                        <  SRR4302540.2334362/94‑1 (MQ=60)

                                       TCCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAA                                                        <  SRR4302540.5765078/94‑1 (MQ=60)

                                       ACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAA                                                        >  SRR4302540.9187800/1‑94 (MQ=60)

                                       ACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAA                                                        <  SRR4302540.8151810/94‑1 (MQ=60)

                                       ACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAA                                                        <  SRR4302540.5968832/94‑1 (MQ=60)

                                        CCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAA                                                       >  SRR4302540.9737806/1‑94 (MQ=60)

                                         CTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAA                                                      >  SRR4302540.6360330/1‑94 (MQ=60)

                                         CTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAA                                                      >  SRR4302540.6360323/1‑94 (MQ=60)

                                         CTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAA                                                      >  SRR4302540.8220762/1‑94 (MQ=60)

                                             ACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAG                                                  <  SRR4302540.4047845/94‑1 (MQ=60)

                                             ACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAG                                                  <  SRR4302540.7057675/94‑1 (MQ=60)

                                             ACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAG                                                  <  SRR4302540.8597362/94‑1 (MQ=60)

                                             ACACATTGGGGCTGATTCTGGAGTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAG                                                  <  SRR4302540.1338880/94‑1 (MQ=60)

                                                CATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCG                                               <  SRR4302540.9396136/94‑1 (MQ=60)

                                                 ATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGC                                              <  SRR4302540.1822911/94‑1 (MQ=60)

                                                 ATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGC                                              <  SRR4302540.5599344/94‑1 (MQ=60)

                                                 ATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGA                                              >  SRR4302540.6925293/1‑94 (MQ=60)

                                                  TTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCA                                             <  SRR4302540.6412949/94‑1 (MQ=60)

                                                  ATGGGGCCGATTCTGGATTCGACTGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCA                                             <  SRR4302540.8676969/94‑1 (MQ=60)

                                                   TGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAA                                            <  SRR4302540.8874963/94‑1 (MQ=60)

                                                   TGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAA                                            >  SRR4302540.9137783/1‑94 (MQ=60)

                                                   TGGGGCTGATTCGGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAA                                            <  SRR4302540.9111944/94‑1 (MQ=60)

                                                    GGGGCTGATTCTGGATTCGACGGGATTTGCGCAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAA                                           <  SRR4302540.1680865/94‑1 (MQ=60)

                                                     GGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAAC                                          <  SRR4302540.299378/94‑1 (MQ=60)

                                                     GGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAAC                                          <  SRR4302540.299376/94‑1 (MQ=60)

                                                     GGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAAC                                          <  SRR4302540.7047450/94‑1 (MQ=60)

                                                     GGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAAC                                          <  SRR4302540.299377/94‑1 (MQ=60)

                                                      GGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACG                                         <  SRR4302540.4091430/94‑1 (MQ=60)

                                                      GGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACG                                         >  SRR4302540.5624642/1‑94 (MQ=60)

                                                      GGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACG                                         <  SRR4302540.6855287/94‑1 (MQ=60)

                                                       GCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGA                                        <  SRR4302540.6401126/94‑1 (MQ=60)

                                                       GCTGATTCTGGATACGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGA                                        <  SRR4302540.127101/94‑1 (MQ=60)

                                                        GTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGAC                                       <  SRR4302540.7354267/94‑1 (MQ=60)

                                                        CTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGAC                                       <  SRR4302540.2640557/94‑1 (MQ=60)

                                                        CTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGAC                                       <  SRR4302540.4274895/94‑1 (MQ=60)

                                                        CTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGAC                                       <  SRR4302540.9720570/94‑1 (MQ=60)

                                                        CTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGAC                                       <  SRR4302540.147026/94‑1 (MQ=60)

                                                        CTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGAC                                       <  SRR4302540.8956521/94‑1 (MQ=60)

                                                        CTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGAC                                       <  SRR4302540.9017325/94‑1 (MQ=60)

                                                        CTGATGCTGGATTCGACGGGATGTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGAC                                       <  SRR4302540.4210539/94‑1 (MQ=60)

                                                         TGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACG                                      <  SRR4302540.716810/94‑1 (MQ=60)

                                                         TGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACG                                      <  SRR4302540.6951018/94‑1 (MQ=60)

                                                         TGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACG                                      <  SRR4302540.421305/94‑1 (MQ=60)

                                                           ATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAA                                    <  SRR4302540.3669780/94‑1 (MQ=60)

                                                           ATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTAGCAAACGACGCA                                    >  SRR4302540.8873748/1‑94 (MQ=60)

                                                            TTCTGTACTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGTCGTTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAA                                   <  SRR4302540.347673/94‑1 (MQ=60)

                                                             TCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAA                                  <  SRR4302540.3524054/94‑1 (MQ=60)

                                                             TCTGGAGTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAA                                  <  SRR4302540.3524056/94‑1 (MQ=60)

                                                              CTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAC                                 <  SRR4302540.6021224/94‑1 (MQ=60)

                                                              CTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAC                                 <  SRR4302540.7695921/94‑1 (MQ=60)

                                                              CTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAC                                 <  SRR4302540.186334/94‑1 (MQ=60)

                                                              CTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAC                                 <  SRR4302540.4989310/94‑1 (MQ=60)

                                                              CTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAC                                 <  SRR4302540.1506783/94‑1 (MQ=60)

                                                              CTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAC                                 <  SRR4302540.1112191/94‑1 (MQ=60)

                                                              CTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAC                                 >  SRR4302540.4175663/1‑94 (MQ=60)

                                                              CTGGATACGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAC                                 <  SRR4302540.2506890/94‑1 (MQ=60)

                                                              CTGGAGACGACGGGATGTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAC                                 <  SRR4302540.2506891/94‑1 (MQ=60)

                                                               TGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACT                                <  SRR4302540.6011334/94‑1 (MQ=60)

                                                               TGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACT                                <  SRR4302540.6011335/94‑1 (MQ=60)

                                                               TGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACT                                >  SRR4302540.7474505/1‑94 (MQ=60)

                                                               TGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACT                                <  SRR4302540.5526358/94‑1 (MQ=60)

                                                                GGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTA                               <  SRR4302540.5412642/94‑1 (MQ=60)

                                                                GGATTCGACGGGAGTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTA                               <  SRR4302540.5103207/94‑1 (MQ=60)

                                                                 GATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTAC                              <  SRR4302540.1773710/94‑1 (MQ=60)

                                                                 GATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTAC                              >  SRR4302540.4145292/1‑94 (MQ=60)

                                                                 GATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTAC                              <  SRR4302540.2940073/94‑1 (MQ=60)

                                                                 GATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTAC                              <  SRR4302540.3172778/94‑1 (MQ=60)

                                                                 GATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTAC                              <  SRR4302540.2986813/94‑1 (MQ=60)

                                                                  ATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACG                             <  SRR4302540.915258/94‑1 (MQ=60)

                                                                  ATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACG                             >  SRR4302540.8573274/1‑94 (MQ=60)

                                                                  ATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACG                             <  SRR4302540.8851936/94‑1 (MQ=60)

                                                                  ATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACG                             <  SRR4302540.1181510/94‑1 (MQ=60)

                                                                   TTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGC                            >  SRR4302540.5100604/1‑94 (MQ=60)

                                                                   TTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGC                            <  SRR4302540.2102911/94‑1 (MQ=60)

                                                                   TTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGC                            <  SRR4302540.3293316/94‑1 (MQ=60)

                                                                    TCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCT                           <  SRR4302540.9276547/94‑1 (MQ=60)

                                                                    TCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCT                           <  SRR4302540.648244/94‑1 (MQ=60)

                                                                    TCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCT                           <  SRR4302540.1236610/94‑1 (MQ=60)

                                                                     CGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTT                          <  SRR4302540.305889/94‑1 (MQ=60)

                                                                       ACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTA                        <  SRR4302540.9211408/94‑1 (MQ=60)

                                                                       ACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTA                        >  SRR4302540.7719565/1‑94 (MQ=60)

                                                                        CGGGATTTGCGAAACCCAATGAGCATGCCGAGGGGCGGTTGGCCTCGTAACAAGCCGCAAAAAATAGTCGCACACGACGAAAACTACGCTTTAC                       >  SRR4302540.2074579/1‑94 (MQ=60)

                                                                         GGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGC                      <  SRR4302540.8143263/94‑1 (MQ=60)

                                                                          GGATTTGCGAACCCCAAGGCGCATGCCGAGGGCCGGTGGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCA                     <  SRR4302540.556874/94‑1 (MQ=60)

                                                                          GGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCA                     >  SRR4302540.7915621/1‑94 (MQ=60)

                                                                           GATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAG                    >  SRR4302540.4942237/1‑94 (MQ=60)

                                                                            ATTTGCGACACCCAAGGCGCATGCCGAGGGGCGGTTGCCCTCGTAAAACGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGC                   <  SRR4302540.5831217/94‑1 (MQ=60)

                                                                            ATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGC                   <  SRR4302540.6919368/94‑1 (MQ=60)

                                                                            ATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGC                   <  SRR4302540.7579682/94‑1 (MQ=60)

                                                                            ATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGC                   <  SRR4302540.5831216/94‑1 (MQ=60)

                                                                             TTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCT                  >  SRR4302540.3695902/1‑94 (MQ=60)

                                                                              TTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTT                 <  SRR4302540.6450659/94‑1 (MQ=60)

                                                                              TTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTT                 <  SRR4302540.4312821/94‑1 (MQ=60)

                                                                              TTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTT                 <  SRR4302540.8100115/94‑1 (MQ=60)

                                                                               TGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTA                >  SRR4302540.8603183/1‑94 (MQ=60)

                                                                                GCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAA               <  SRR4302540.10129176/94‑1 (MQ=60)

                                                                                GCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAA               <  SRR4302540.7545431/94‑1 (MQ=60)

                                                                                GCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAA               <  SRR4302540.71704/94‑1 (MQ=60)

                                                                                 CGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAAT              <  SRR4302540.6304735/94‑1 (MQ=60)

                                                                                 CGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAAT              <  SRR4302540.9725701/94‑1 (MQ=60)

                                                                                  GAAACCCAAGGCGCATGCCGAGGGGCGGTTTGCCTTGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATA             <  SRR4302540.7224254/94‑1 (MQ=60)

                                                                                   AAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAA            >  SRR4302540.9602688/1‑94 (MQ=60)

                                                                                   AAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAA            >  SRR4302540.4241084/1‑94 (MQ=60)

                                                                                   AAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAA            <  SRR4302540.2611560/94‑1 (MQ=60)

                                                                                   AAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAA            <  SRR4302540.290348/94‑1 (MQ=60)

                                                                                   AAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAA            >  SRR4302540.5129381/1‑94 (MQ=60)

                                                                                    AACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAAC           >  SRR4302540.3681220/1‑94 (MQ=60)

                                                                                    AACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAAC           >  SRR4302540.3681213/1‑94 (MQ=60)

                                                                                     ACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACC          <  SRR4302540.5553903/94‑1 (MQ=60)

                                                                                      CCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAGAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCT         <  SRR4302540.4875007/94‑1 (MQ=60)

                                                                                      CCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCT         <  SRR4302540.4875008/94‑1 (MQ=60)

                                                                                      CCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCT         <  SRR4302540.9333587/94‑1 (MQ=60)

                                                                                       CCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTG        >  SRR4302540.2761253/1‑94 (MQ=60)

                                                                                        CAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGC       <  SRR4302540.9317589/94‑1 (MQ=60)

                                                                                        CAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGC       <  SRR4302540.1681663/94‑1 (MQ=60)

                                                                                         AAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT      >  SRR4302540.6338259/1‑94 (MQ=60)

                                                                                         AAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT      >  SRR4302540.272905/1‑94 (MQ=60)

                                                                                         AAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT      <  SRR4302540.9563379/94‑1 (MQ=60)

                                                                                         AAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT      <  SRR4302540.108750/94‑1 (MQ=60)

                                                                                         AAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT      <  SRR4302540.8947062/94‑1 (MQ=60)

                                                                                          AGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCTT     <  SRR4302540.423165/94‑1 (MQ=60)

                                                                                           GGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCTTA    <  SRR4302540.3007536/94‑1 (MQ=60)

                                                                                            GCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCTTAG   <  SRR4302540.10077787/94‑1 (MQ=60)

                                                                                            GCGCATGCCGAGGGCCGGTGGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCTTAG   <  SRR4302540.6426429/94‑1 (MQ=60)

                                                                                             CGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCTTAGA  <  SRR4302540.3399919/94‑1 (MQ=60)

ATTGAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCTTAGA  >  NC_000913/2753562‑2753748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`