Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,768,467 T→C intergenic (+42/‑235) yfjR → / → b2636 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,768,4670TC99.1% 1013.5 / ‑3.0 320intergenic (+42/‑235)yfjR/b2636hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (1/2);  new base C (157/160);  total (158/162)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.53e-01

Only 100 of 333 total aligned reads displayed.

CCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTG  >  NC_000913/2768377‑2768556
                                                                                          |                                                                                         
ccAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAgcgc                                                                                         >  1:622370/1‑93 (MQ=255)
ccAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAgcgc                                                                                         >  2:533807/1‑93 (MQ=255)
ccAGCATTCACTGCTTACGTTTGTTCCAGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAgcgc                                                                                         >  1:7658225/1‑93 (MQ=255)
      ttCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTa                                                                                   <  1:1411786/93‑1 (MQ=255)
      ttCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTa                                                                                   >  2:2306217/1‑93 (MQ=255)
      ttCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTa                                                                                   <  1:3705093/93‑1 (MQ=255)
      ttCACTGCTTACGTTTATTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTa                                                                                   >  2:9560205/1‑93 (MQ=255)
       tCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAt                                                                                  <  1:5206763/93‑1 (MQ=255)
        taCTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAtt                                                                                 <  1:4801222/92‑1 (MQ=255)
        cACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAtt                                                                                 <  2:6741967/93‑1 (MQ=255)
        cACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAtt                                                                                 >  1:7757588/1‑93 (MQ=255)
         aCTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGACTAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTg                                                                                >  1:9980777/1‑93 (MQ=255)
          cTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGc                                                                               >  2:7662154/1‑93 (MQ=255)
           tGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGcc                                                                              >  1:2390542/1‑93 (MQ=255)
           tGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGcc                                                                              >  2:6454701/1‑93 (MQ=255)
           tGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGcc                                                                              >  2:5051762/1‑93 (MQ=255)
              ttACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCAtt                                                                           <  1:3538619/93‑1 (MQ=255)
              ttACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCAtt                                                                           >  2:6569849/1‑93 (MQ=255)
              ttACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCAtt                                                                           >  1:5612889/1‑93 (MQ=255)
              ttACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCAtt                                                                           <  2:3896671/93‑1 (MQ=255)
               tACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTa                                                                          >  2:4067795/1‑93 (MQ=255)
                 cGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATc                                                                        <  1:6000838/93‑1 (MQ=255)
                 cGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGACCAGCGCCCGTTATTGCCATTATc                                                                        >  1:2976267/1‑93 (MQ=255)
                   tttGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGc                                                                      >  2:8884017/1‑93 (MQ=255)
                   tttGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGc                                                                      >  2:4138395/1‑93 (MQ=255)
                    ttGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGcc                                                                     >  1:1917285/1‑93 (MQ=255)
                     tGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCa                                                                    <  2:3684043/93‑1 (MQ=255)
                      gTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCAt                                                                   <  2:7806203/93‑1 (MQ=255)
                      gTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCAt                                                                   <  2:8103116/93‑1 (MQ=255)
                       ttCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCAtt                                                                  <  1:4359297/93‑1 (MQ=255)
                       ttCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCAtt                                                                  >  2:952254/1‑93 (MQ=255)
                       ttCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCAtt                                                                  <  1:3263006/93‑1 (MQ=255)
                       ttCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCAtt                                                                  <  1:7833623/93‑1 (MQ=255)
                            gCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTat                                                             <  2:1396325/93‑1 (MQ=255)
                            gCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTat                                                             >  1:1249142/1‑93 (MQ=255)
                             ccGACAACCCACCGGAATAGCGCAGGCCTTTTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatc                                                            <  1:7718218/93‑1 (MQ=255)
                              cGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatca                                                           >  2:5967493/1‑93 (MQ=255)
                               gACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatcat                                                          <  1:96269/93‑1 (MQ=255)
                               gACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatcat                                                          >  1:8726786/1‑93 (MQ=255)
                                aCAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatcatc                                                         >  2:712562/1‑93 (MQ=255)
                                aCAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatcatc                                                         <  2:6139152/93‑1 (MQ=255)
                                   gCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtc                                                      <  2:3101049/93‑1 (MQ=255)
                                   gCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtc                                                      <  1:866332/93‑1 (MQ=255)
                                    cccACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtca                                                     >  2:5627136/1‑93 (MQ=255)
                                    cccACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtca                                                     <  1:4147127/93‑1 (MQ=255)
                                       aCCGGAATAGCGCAGGCGTTGTTATCAACCCGGCATCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtcatca                                                  >  1:4935379/1‑93 (MQ=255)
                                       aCCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtcatca                                                  >  1:8477445/1‑93 (MQ=255)
                                       aCCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtcatca                                                  >  1:9159558/1‑93 (MQ=255)
                                       aCCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtcatca                                                  <  2:4535430/93‑1 (MQ=255)
                                       aCCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtcatca                                                  <  2:1977944/93‑1 (MQ=255)
                                        ccGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTcatcat                                                 >  2:2778631/1‑93 (MQ=255)
                                           gAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCt                                              >  2:7556077/1‑93 (MQ=255)
                                            aaTAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTg                                             <  2:5166251/93‑1 (MQ=255)
                                             aTAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGTAATTATCGCCATTGTTATCATCGTCATCATTCTGa                                            >  2:8408253/1‑93 (MQ=255)
                                             aTAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGa                                            >  2:2595923/1‑93 (MQ=255)
                                              tAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGaa                                           >  1:4765409/1‑93 (MQ=255)
                                              tAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGaa                                           <  2:9335839/93‑1 (MQ=255)
                                                gcgcAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACa                                         <  2:5825905/93‑1 (MQ=255)
                                                 cgcAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACaa                                        <  2:7723734/93‑1 (MQ=255)
                                                  gcAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACaaa                                       >  1:1347370/1‑93 (MQ=255)
                                                  gcAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACaaa                                       <  1:3726836/93‑1 (MQ=255)
                                                  gcAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACaaa                                       >  2:4251329/1‑93 (MQ=255)
                                                   cAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACaaaa                                      >  2:7435541/1‑93 (MQ=255)
                                                    aGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAc                                     >  1:8358778/1‑93 (MQ=255)
                                                    aGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAc                                     <  1:6854393/93‑1 (MQ=255)
                                                    aGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAc                                     >  2:478667/1‑93 (MQ=255)
                                                    aGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAc                                     <  1:8281557/93‑1 (MQ=255)
                                                    aGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAc                                     >  2:2479599/1‑93 (MQ=255)
                                                    aGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAc                                     <  2:7349758/93‑1 (MQ=255)
                                                    aGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTCATCATCGTCATCATTCTGAACAAAAc                                     <  1:6455691/93‑1 (MQ=255)
                                                    aGGCGTTGTGATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAc                                     <  1:2481201/93‑1 (MQ=255)
                                                     ggCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAcc                                    >  1:7404719/1‑93 (MQ=255)
                                                      gCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCg                                   >  2:4649314/1‑93 (MQ=255)
                                                       cGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCgg                                  <  2:1270144/93‑1 (MQ=255)
                                                         ttgttATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAg                                <  1:6298210/93‑1 (MQ=255)
                                                          tgttATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAgt                               <  1:9654886/93‑1 (MQ=255)
                                                             tATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTc                            >  2:8598749/1‑93 (MQ=255)
                                                              aTCAACCCGGCAACATGGTGGAGACCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGTACAATACCGGAGTGTcc                           >  2:9160994/1‑93 (MQ=21)
                                                               tCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCg                          >  2:1029942/1‑93 (MQ=255)
                                                                cAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGa                         >  2:3477851/1‑93 (MQ=255)
                                                                cAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGa                         <  1:5861562/93‑1 (MQ=255)
                                                                cAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGa                         <  1:2121553/93‑1 (MQ=255)
                                                                 aaCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAc                        >  1:5292614/1‑93 (MQ=255)
                                                                 aaCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAc                        >  1:1721250/1‑93 (MQ=255)
                                                                 aaCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGCGTCCGAc                        >  2:1856676/1‑93 (MQ=255)
                                                                    ccGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTTAACAAAACCGGAGTGTCCGACAGc                     <  1:3935803/93‑1 (MQ=255)
                                                                     cGGGAACATGAAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGcc                    <  1:9395857/93‑1 (MQ=255)
                                                                        cAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCa                 <  1:9801462/93‑1 (MQ=255)
                                                                         aaCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCAc                <  1:3102701/93‑1 (MQ=255)
                                                                         aaCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCAc                >  2:3304375/1‑93 (MQ=255)
                                                                         aaCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATAGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCAc                <  2:8685399/93‑1 (MQ=255)
                                                                          aCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACg               >  1:7222871/1‑93 (MQ=255)
                                                                           cATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACgg              <  1:5073323/93‑1 (MQ=255)
                                                                              ggaggaGCCCAGCGCCCGTGATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGccc           <  2:6943781/93‑1 (MQ=255)
                                                                                 ggagCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGa        <  1:1065877/93‑1 (MQ=255)
                                                                                  gatcccAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGac       <  2:3802235/90‑1 (MQ=255)
                                                                                   agCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGaca      <  1:8744879/93‑1 (MQ=255)
                                                                                    gCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGacac     <  1:6529267/93‑1 (MQ=255)
                                                                                      ccAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACCGCCTCCCGGCCCTGACACtt   >  1:5654977/1‑93 (MQ=255)
                                                                                       cAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTg  >  1:2745232/1‑93 (MQ=255)
                                                                                          |                                                                                         
CCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTG  >  NC_000913/2768377‑2768556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGCA  >  NC_000913/2768374‑2768558
                                                                                             |                                                                                           
TATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGC                                                                                             >  SRR4302540.9757449/1‑94 (MQ=60)
TATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGC                                                                                             <  SRR4302540.9746469/94‑1 (MQ=60)
TATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGC                                                                                             <  SRR4302540.7738980/94‑1 (MQ=60)
 ATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCG                                                                                            >  SRR4302540.861204/1‑94 (MQ=60)
  TCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGC                                                                                           >  SRR4302540.628992/1‑94 (MQ=60)
  TCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGC                                                                                           >  SRR4302540.7744456/1‑94 (MQ=60)
  TCCAGCATTCACTGCTTACGTTTGTTCCAGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGC                                                                                           >  SRR4302540.7744455/1‑94 (MQ=60)
     AGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCG                                                                                        <  SRR4302540.5674878/94‑1 (MQ=60)
     AGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCG                                                                                        >  SRR4302540.9528744/1‑94 (MQ=60)
     AGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCG                                                                                        >  SRR4302540.8803944/1‑94 (MQ=60)
      GCATTCGCTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACACGGCAACATGGAGGAGCCCAGCGCCCGT                                                                                       <  SRR4302540.2407912/94‑1 (MQ=60)
       CATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTT                                                                                      <  SRR4302540.2764820/94‑1 (MQ=60)
       CATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCAAGCGCCCGTT                                                                                      >  SRR4302540.3244476/1‑94 (MQ=60)
        ATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTA                                                                                     >  SRR4302540.6522996/1‑94 (MQ=60)
        ATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTA                                                                                     >  SRR4302540.6417638/1‑94 (MQ=60)
         TTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAT                                                                                    <  SRR4302540.1427013/94‑1 (MQ=60)
         TTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAT                                                                                    >  SRR4302540.1207756/1‑94 (MQ=60)
         TTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAT                                                                                    <  SRR4302540.9899380/94‑1 (MQ=60)
         TTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAT                                                                                    <  SRR4302540.3745541/94‑1 (MQ=60)
          TCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATT                                                                                   <  SRR4302540.1397823/94‑1 (MQ=60)
          TCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATT                                                                                   >  SRR4302540.7848235/1‑94 (MQ=60)
          TCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATT                                                                                   <  SRR4302540.1332254/94‑1 (MQ=60)
          TCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATT                                                                                   <  SRR4302540.5776668/94‑1 (MQ=60)
          TCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATT                                                                                   <  SRR4302540.5263480/94‑1 (MQ=60)
           TACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTG                                                                                  <  SRR4302540.4852604/94‑1 (MQ=60)
           CACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGACTAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTG                                                                                  >  SRR4302540.10097157/1‑94 (MQ=60)
             CTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCC                                                                                >  SRR4302540.2416307/1‑94 (MQ=60)
             CTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCC                                                                                <  SRR4302540.10108676/94‑1 (MQ=60)
             CTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCC                                                                                >  SRR4302540.3743974/1‑94 (MQ=60)
             CTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCC                                                                                >  SRR4302540.2647093/1‑94 (MQ=60)
              TGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCA                                                                               >  SRR4302540.8585161/1‑94 (MQ=60)
               GCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCATCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCAT                                                                              <  SRR4302540.5090140/94‑1 (MQ=60)
               GCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCAT                                                                              >  SRR4302540.7175801/1‑94 (MQ=60)
                CTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATT                                                                             >  SRR4302540.9745279/1‑94 (MQ=60)
                CTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATT                                                                             >  SRR4302540.5674637/1‑94 (MQ=60)
                CTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATT                                                                             >  SRR4302540.7842294/1‑94 (MQ=60)
                 TTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTA                                                                            <  SRR4302540.3577257/94‑1 (MQ=60)
                 TTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTA                                                                            <  SRR4302540.6772936/94‑1 (MQ=60)
                 TTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTA                                                                            <  SRR4302540.2452938/94‑1 (MQ=60)
                  TACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTGCCATTAT                                                                           <  SRR4302540.8839973/94‑1 (MQ=60)
                  TACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTAT                                                                           <  SRR4302540.5424091/94‑1 (MQ=60)
                   ACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATC                                                                          >  SRR4302540.8497878/1‑94 (MQ=60)
                   ACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATC                                                                          <  SRR4302540.4979490/94‑1 (MQ=60)
                   ACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATC                                                                          >  SRR4302540.4320529/1‑94 (MQ=60)
                   ACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGACCAGCGCCCGTTATTGCCATTATC                                                                          >  SRR4302540.3009160/1‑94 (MQ=60)
                    CGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCG                                                                         <  SRR4302540.6067346/94‑1 (MQ=60)
                    CGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCG                                                                         <  SRR4302540.5951007/94‑1 (MQ=60)
                    CGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCG                                                                         <  SRR4302540.4677211/94‑1 (MQ=60)
                     GTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGTCATTTTCGC                                                                        >  SRR4302540.3754657/1‑94 (MQ=60)
                     GTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGC                                                                        >  SRR4302540.9957385/1‑94 (MQ=60)
                      TTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCC                                                                       >  SRR4302540.208965/1‑94 (MQ=60)
                      TTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCC                                                                       >  SRR4302540.1938203/1‑94 (MQ=60)
                      TTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCC                                                                       >  SRR4302540.10087627/1‑94 (MQ=60)
                       TTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCA                                                                      >  SRR4302540.9216209/1‑94 (MQ=60)
                        TGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCAT                                                                     >  SRR4302540.839737/1‑94 (MQ=60)
                        TGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCAT                                                                     >  SRR4302540.5849625/1‑94 (MQ=60)
                         tgTCCGGCCCACAGCCCACCGGAATTGCGCAGGCGTTGTTATCACCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATT                                                                    <  SRR4302540.17606/92‑1 (MQ=60)
                         GTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATT                                                                    <  SRR4302540.1772351/94‑1 (MQ=60)
                         GTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATT                                                                    >  SRR4302540.9837502/1‑94 (MQ=60)
                          TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTG                                                                   <  SRR4302540.790735/94‑1 (MQ=60)
                          TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTG                                                                   <  SRR4302540.7925157/94‑1 (MQ=60)
                          TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTG                                                                   <  SRR4302540.3298609/94‑1 (MQ=60)
                          TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTG                                                                   <  SRR4302540.4406706/94‑1 (MQ=60)
                              GGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTAT                                                               >  SRR4302540.1261898/1‑94 (MQ=60)
                               GCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATC                                                              <  SRR4302540.3386406/94‑1 (MQ=60)
                               GCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATC                                                              <  SRR4302540.599663/94‑1 (MQ=60)
                               GCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATC                                                              <  SRR4302540.7675202/94‑1 (MQ=60)
                               GCCCACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAGCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATC                                                              <  SRR4302540.652817/94‑1 (MQ=60)
                                CCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCA                                                             <  SRR4302540.4135908/94‑1 (MQ=60)
                                CCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCA                                                             <  SRR4302540.7807505/94‑1 (MQ=60)
                                CCGACAGCCCACCGGAATAGCGCAGGCGTTGGTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCA                                                             <  SRR4302540.7807504/94‑1 (MQ=60)
                                CCGACAACCCACCGGAATAGCGCAGGCCTTTTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCA                                                             <  SRR4302540.7807507/94‑1 (MQ=60)
                                 CGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCAT                                                            >  SRR4302540.8828127/1‑94 (MQ=60)
                                  GACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATC                                                           <  SRR4302540.97291/94‑1 (MQ=60)
                                  GACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATC                                                           <  SRR4302540.1684472/94‑1 (MQ=60)
                                    CAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGT                                                         >  SRR4302540.1310685/1‑94 (MQ=60)
                                     AGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTC                                                        >  SRR4302540.3874008/1‑94 (MQ=60)
                                      GCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCA                                                       <  SRR4302540.9747119/94‑1 (MQ=60)
                                      GCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCA                                                       <  SRR4302540.875531/94‑1 (MQ=60)
                                       CCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCAT                                                      <  SRR4302540.4192014/94‑1 (MQ=60)
                                        CCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATC                                                     <  SRR4302540.9601217/94‑1 (MQ=60)
                                         CACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCATCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCA                                                    >  SRR4302540.4988611/1‑94 (MQ=60)
                                         CACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCA                                                    >  SRR4302540.8575907/1‑94 (MQ=60)
                                         CACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCA                                                    >  SRR4302540.9269497/1‑94 (MQ=60)
                                         CACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCA                                                    >  SRR4302540.6337568/1‑94 (MQ=60)
                                          CCCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCAT                                                   <  SRR4302540.5283918/94‑1 (MQ=60)
                                          CCCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCAT                                                   <  SRR4302540.3748996/94‑1 (MQ=60)
                                          ACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCAT                                                   >  SRR4302540.4739649/1‑94 (MQ=60)
                                          ACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCAT                                                   >  SRR4302540.8594965/1‑94 (MQ=60)
                                          ACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCAT                                                   <  SRR4302540.4960078/94‑1 (MQ=60)
                                            CGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTC                                                 >  SRR4302540.3114586/1‑94 (MQ=60)
                                             GGAATAGCGCAGGCGTTGTTATCAACCCAGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCT                                                <  SRR4302540.3379507/94‑1 (MQ=60)
                                              GAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTG                                               >  SRR4302540.4818620/1‑94 (MQ=60)
                                              GAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTG                                               >  SRR4302540.4680357/1‑94 (MQ=60)
                                              GAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTG                                               >  SRR4302540.2932517/1‑94 (MQ=60)
                                              GAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTG                                               >  SRR4302540.4818621/1‑94 (MQ=60)
                                               AATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGA                                              >  SRR4302540.5494737/1‑94 (MQ=60)
                                                ATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAA                                             <  SRR4302540.2417104/94‑1 (MQ=60)
                                                ATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAA                                             >  SRR4302540.4816284/1‑94 (MQ=60)
                                                 TAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAAC                                            <  SRR4302540.6157993/94‑1 (MQ=60)
                                                   GCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAA                                          <  SRR4302540.1179945/94‑1 (MQ=60)
                                                    CGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAA                                         >  SRR4302540.1361523/1‑94 (MQ=60)
                                                    CGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAA                                         >  SRR4302540.2914403/1‑94 (MQ=60)
                                                    CGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAA                                         >  SRR4302540.8919240/1‑94 (MQ=60)
                                                     GCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAA                                        >  SRR4302540.2120867/1‑94 (MQ=60)
                                                     GCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAA                                        <  SRR4302540.3767500/94‑1 (MQ=60)
                                                     GCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAA                                        >  SRR4302540.3648917/1‑94 (MQ=60)
                                                      CAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAC                                       >  SRR4302540.8455777/1‑94 (MQ=60)
                                                       AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACC                                      <  SRR4302540.2356805/94‑1 (MQ=60)
                                                       AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACG                                      >  SRR4302540.8659770/1‑94 (MQ=60)
                                                       AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACC                                      >  SRR4302540.5342187/1‑94 (MQ=60)
                                                       AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACC                                      <  SRR4302540.6930323/94‑1 (MQ=60)
                                                       AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACC                                      <  SRR4302540.8377745/94‑1 (MQ=60)
                                                       AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACC                                      >  SRR4302540.7487215/1‑94 (MQ=60)
                                                       AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTCATCATCGTCATCATTCTGAACAAAACC                                      <  SRR4302540.6527548/94‑1 (MQ=60)
                                                       AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCAGTCATTGCCATTATCGCCATGGTTATCATCGcattctttctgaacaaaacg                                      >  SRR4302540.8886400/1‑74 (MQ=60)
                                                       AGGCGTTGTGATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACC                                      <  SRR4302540.2507930/94‑1 (MQ=60)
                                                        GGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCG                                     >  SRR4302540.3178655/1‑94 (MQ=60)
                                                        GGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCG                                     <  SRR4302540.7409872/94‑1 (MQ=60)
                                                        GGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCG                                     <  SRR4302540.4014928/94‑1 (MQ=60)
                                                         GCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGG                                    <  SRR4302540.8430727/94‑1 (MQ=60)
                                                           GTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAG                                  >  SRR4302540.5018026/1‑94 (MQ=60)
                                                           GTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAG                                  <  SRR4302540.165710/94‑1 (MQ=60)
                                                            TTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGT                                 <  SRR4302540.7605755/94‑1 (MQ=60)
                                                            TTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGT                                 <  SRR4302540.6368347/94‑1 (MQ=60)
                                                            TTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGT                                 <  SRR4302540.7811525/94‑1 (MQ=60)
                                                            TGGTTATCACCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTACCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGT                                 <  SRR4302540.6368346/94‑1 (MQ=60)
                                                             TGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTG                                <  SRR4302540.9768556/94‑1 (MQ=60)
                                                              GTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGT                               >  SRR4302540.5183574/1‑94 (MQ=60)
                                                               TTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTC                              >  SRR4302540.8235505/1‑94 (MQ=60)
                                                                TATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCC                             >  SRR4302540.9390618/1‑94 (MQ=60)
                                                                 ATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCG                            <  SRR4302540.153526/94‑1 (MQ=60)
                                                                 ATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCG                            <  SRR4302540.381121/94‑1 (MQ=60)
                                                                   CAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAC                          <  SRR4302540.7294091/94‑1 (MQ=60)
                                                                   CAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAC                          >  SRR4302540.1739828/1‑94 (MQ=60)
                                                                   CAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAC                          <  SRR4302540.5926380/94‑1 (MQ=60)
                                                                   CAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAC                          <  SRR4302540.945555/94‑1 (MQ=60)
                                                                   CAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAC                          >  SRR4302540.5350482/1‑94 (MQ=60)
                                                                   CAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAC                          <  SRR4302540.2144315/94‑1 (MQ=60)
                                                                       CCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTTAACAAAACCGGAGTGTCCGACAGCC                      <  SRR4302540.3978342/94‑1 (MQ=60)
                                                                       CCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCC                      >  SRR4302540.5965929/1‑94 (MQ=60)
                                                                       CCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTCATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCC                      >  SRR4302540.8503079/1‑94 (MQ=60)
                                                                        CGGGAACATGAAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCT                     <  SRR4302540.9507659/94‑1 (MQ=60)
                                                                        CGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCT                     >  SRR4302540.3017961/1‑94 (MQ=60)
                                                                         GGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTC                    >  SRR4302540.2803862/1‑94 (MQ=60)
                                                                          GCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCA                   <  SRR4302540.6891404/94‑1 (MQ=60)
                                                                          GCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCA                   >  SRR4302540.7898260/1‑94 (MQ=60)
                                                                          GCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCA                   >  SRR4302540.4273501/1‑94 (MQ=60)
                                                                           CAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCAC                  >  SRR4302540.7974510/1‑94 (MQ=60)
                                                                           CAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCAC                  <  SRR4302540.5219787/94‑1 (MQ=60)
                                                                           CAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCAC                  <  SRR4302540.9916217/94‑1 (MQ=60)
                                                                            AACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACG                 <  SRR4302540.2331038/94‑1 (MQ=60)
                                                                            AACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACG                 >  SRR4302540.7303386/1‑94 (MQ=60)
                                                                            AACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACG                 <  SRR4302540.3136678/94‑1 (MQ=60)
                                                                              CATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGC               <  SRR4302540.5128169/94‑1 (MQ=60)
                                                                              CATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGC               >  SRR4302540.7384816/1‑94 (MQ=60)
                                                                              CATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGC               <  SRR4302540.9743162/94‑1 (MQ=60)
                                                                               ATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCC              >  SRR4302540.7206370/1‑94 (MQ=60)
                                                                               ATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCC              >  SRR4302540.3965058/1‑94 (MQ=60)
                                                                                 GGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCT            >  SRR4302540.8084878/1‑94 (MQ=60)
                                                                                 GGAGGAGCCCAGCGCCCGTTATTCCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCT            <  SRR4302540.5037406/94‑1 (MQ=60)
                                                                                  GAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTG           <  SRR4302540.6513960/94‑1 (MQ=60)
                                                                                   AGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGA          >  SRR4302540.8835977/1‑94 (MQ=60)
                                                                                    GGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGAC         <  SRR4302540.1076741/94‑1 (MQ=60)
                                                                                    GGAGCCCAGCGCCCGTTATTGCCATTAGCGCCATTGTTATCATCGTCATCATTCTGAACAAAGCCGGAGTGTCCGACAGCCTCACGGCCCTGAC         <  SRR4302540.6108974/94‑1 (MQ=60)
                                                                                     GAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACA        <  SRR4302540.1418206/94‑1 (MQ=60)
                                                                                      AGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACAC       <  SRR4302540.6538811/94‑1 (MQ=60)
                                                                                      AGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACAC       <  SRR4302540.8846369/94‑1 (MQ=60)
                                                                                       GCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACT      <  SRR4302540.6601766/94‑1 (MQ=60)
                                                                                       GCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACT      <  SRR4302540.5596905/94‑1 (MQ=60)
                                                                                        CCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACCGCCTCCCGGCCCTGACACTT     >  SRR4302540.5717244/1‑94 (MQ=60)
                                                                                        CCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTT     >  SRR4302540.5717243/1‑94 (MQ=60)
                                                                                         CCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTG    >  SRR4302540.2774881/1‑94 (MQ=60)
                                                                                         CCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTG    <  SRR4302540.3478580/94‑1 (MQ=60)
                                                                                         CCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTG    <  SRR4302540.8775173/94‑1 (MQ=60)
                                                                                          CAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGC   >  SRR4302540.968265/1‑94 (MQ=60)
                                                                                          CAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGC   >  SRR4302540.189539/1‑94 (MQ=60)
                                                                                          CAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGC   >  SRR4302540.5865819/1‑94 (MQ=60)
                                                                                           AGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGCA  <  SRR4302540.328895/94‑1 (MQ=60)
                                                                                           AGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGCCCCTGACACTTGCA  >  SRR4302540.2585917/1‑94 (MQ=60)
                                                                                             |                                                                                           
TATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGCA  >  NC_000913/2768374‑2768558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑