Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,768,467 |
T→C |
intergenic (+42/‑235) |
yfjR → / → b2636 |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,768,467 | 0 | T | C | 100.0%
| 832.4
/ NA
| 259 | intergenic (+42/‑235) | yfjR/b2636 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (140/119); total (140/119) |
Only 100 of 264 total aligned reads displayed.
CCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTG > NC_000913/2768377‑2768556
|
ccAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAgcgc > 1:1315026/1‑93 (MQ=255)
aGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGccc < 1:404204/93‑1 (MQ=255)
gCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCg < 2:5060139/93‑1 (MQ=255)
gCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCg > 2:1786594/1‑93 (MQ=255)
cATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGt > 1:1827553/1‑93 (MQ=255)
cATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGCTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGt > 1:3768868/1‑93 (MQ=255)
tCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAt < 1:5983390/93‑1 (MQ=255)
cACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTCtt > 2:5405348/1‑93 (MQ=255)
cACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAtt > 2:2249628/1‑93 (MQ=255)
cACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTAtt < 2:440891/93‑1 (MQ=255)
cTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGc > 2:1577636/1‑93 (MQ=255)
tGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGcc > 1:5822659/1‑93 (MQ=255)
gCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCa > 1:5921687/1‑93 (MQ=255)
gCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCa < 2:530247/93‑1 (MQ=255)
cTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCAt > 2:2885805/1‑93 (MQ=255)
cTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCAt > 1:3658542/1‑93 (MQ=255)
tACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTa > 2:4114355/1‑93 (MQ=255)
tACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTa < 1:662213/93‑1 (MQ=255)
gTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCg > 1:994085/1‑93 (MQ=255)
tttGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGc > 1:1152535/1‑93 (MQ=255)
tttGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCAATTATCGc > 1:3337491/1‑93 (MQ=255)
ttGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGcc > 1:5168609/1‑93 (MQ=255)
tCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAGCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTg < 1:2539534/93‑1 (MQ=255)
cGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGtt > 1:2564768/1‑93 (MQ=255)
ggCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTa > 2:757503/1‑93 (MQ=255)
ccGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatc < 1:1790549/93‑1 (MQ=255)
cGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatca < 1:1283360/93‑1 (MQ=255)
cGACAGACCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGATATTGCCATTATCGCCATTGTTatca > 2:2956650/1‑93 (MQ=255)
gACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatcat > 1:1535891/1‑93 (MQ=255)
gACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatcat < 2:583851/93‑1 (MQ=255)
aCAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTatcatc > 1:5272639/1‑93 (MQ=255)
cAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGTAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCg < 2:716566/93‑1 (MQ=255)
aGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGt > 2:3485287/1‑93 (MQ=255)
aGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGt > 2:1728913/1‑93 (MQ=255)
aGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGt > 2:2013077/1‑93 (MQ=255)
aGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGt > 2:2610391/1‑93 (MQ=255)
gCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtc > 1:3076447/1‑93 (MQ=255)
cccccGGAATAGCGCAGGCGTTGTTATCACCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtcat < 1:1201880/90‑1 (MQ=255)
ccACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGtcat > 2:4796130/1‑93 (MQ=255)
ccGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTcatcat > 1:5030088/1‑93 (MQ=255)
ccGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTcatcat > 2:5650897/1‑93 (MQ=255)
ccGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTcatcat > 2:1381609/1‑93 (MQ=255)
cGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCAtt < 1:6238837/93‑1 (MQ=255)
ggAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTc < 1:6056507/93‑1 (MQ=255)
ggAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTc > 1:2370530/1‑93 (MQ=255)
gAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCt > 1:553737/1‑93 (MQ=255)
gAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCt < 2:1453442/93‑1 (MQ=255)
gAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCt > 2:2363172/1‑93 (MQ=255)
gAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCt > 1:775608/1‑93 (MQ=255)
gAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCt < 2:3710534/93‑1 (MQ=255)
aaTAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTg > 1:4071399/1‑93 (MQ=255)
tAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGaa < 1:551404/93‑1 (MQ=255)
tAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGaa < 2:4687996/93‑1 (MQ=255)
tAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGaa < 1:1975858/93‑1 (MQ=255)
tAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCACCGTCATCATTCTGaa < 2:5182527/93‑1 (MQ=255)
gcgcAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACa < 1:1572469/93‑1 (MQ=255)
cgcAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACaa < 2:3691451/93‑1 (MQ=255)
gcAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACaaa < 1:2871115/93‑1 (MQ=255)
cAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACaaaa > 2:3283028/1‑93 (MQ=255)
cAGGCGGTGTTACCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACaaaa < 1:4209544/93‑1 (MQ=255)
aGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAc < 2:471919/93‑1 (MQ=255)
aGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAc > 1:888500/1‑93 (MQ=255)
aGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAc > 1:4743728/1‑93 (MQ=255)
ggCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAcc > 2:2444030/1‑93 (MQ=255)
gttgttATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGa < 1:2933491/93‑1 (MQ=255)
ttgttATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAg > 2:4525864/1‑93 (MQ=255)
ttgttATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAg < 2:3930272/93‑1 (MQ=255)
gttATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAgtg > 1:2617726/1‑93 (MQ=255)
gttATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAgtg < 2:5604746/93‑1 (MQ=255)
ttATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAgtgt > 2:2094473/1‑93 (MQ=255)
ttATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAgtgt > 1:4163659/1‑93 (MQ=255)
tATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTc < 2:4358719/93‑1 (MQ=255)
tATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTc < 2:847612/93‑1 (MQ=255)
tATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTc < 1:4392967/93‑1 (MQ=255)
tCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCg > 2:4215129/1‑93 (MQ=255)
aaCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAc > 1:346235/1‑93 (MQ=255)
aCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACa > 2:2693270/1‑93 (MQ=255)
cccGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAg > 1:4500299/1‑93 (MQ=255)
ggCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCt > 2:3167535/1‑93 (MQ=255)
ggCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCt < 1:3491183/93‑1 (MQ=255)
ggCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCt > 1:4370853/1‑93 (MQ=255)
ggCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCt > 1:5743801/1‑93 (MQ=255)
cAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCa < 1:1053262/93‑1 (MQ=255)
aaCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCAc < 1:715798/93‑1 (MQ=255)
aCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAGCAAAACCGGAGTGTCTGAACGCCTCACg > 2:1262206/1‑93 (MQ=21)
aCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACg < 2:6269138/93‑1 (MQ=255)
aCATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACg < 1:3924534/93‑1 (MQ=255)
cATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACgg > 1:2199215/1‑93 (MQ=255)
aTGGAGGGGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGc > 2:5986460/1‑93 (MQ=255)
ggaggaGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGccc > 2:5276583/1‑93 (MQ=255)
ggaggaGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGccc < 2:2770329/93‑1 (MQ=255)
ggaggaGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGccc < 2:6108410/93‑1 (MQ=255)
gaggagCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCt > 2:4298431/1‑93 (MQ=255)
aggagCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTg > 1:2767131/1‑93 (MQ=255)
ggagCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGa < 2:1062851/93‑1 (MQ=255)
ccAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACtt < 2:1600362/93‑1 (MQ=255)
ccAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACtt < 2:404043/93‑1 (MQ=255)
ccAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCGGACACtt > 2:3528928/1‑93 (MQ=255)
cAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTg > 1:1841589/1‑93 (MQ=255)
cAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTg > 1:4614784/1‑93 (MQ=255)
|
CCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTG > NC_000913/2768377‑2768556
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGCAA > NC_000913/2768375‑2768559
|
ATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCG > SRR4302533.5067443/1‑94 (MQ=60)
TCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGC > SRR4302533.1322915/1‑94 (MQ=60)
CCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCC > SRR4302533.4624424/1‑94 (MQ=60)
CCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCC > SRR4302533.3856118/1‑94 (MQ=60)
AGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCG < SRR4302533.406639/94‑1 (MQ=60)
GCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGT > SRR4302533.1838715/1‑94 (MQ=60)
GCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGCTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGT > SRR4302533.3791977/1‑94 (MQ=60)
CATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTT > SRR4302533.2006572/1‑94 (MQ=60)
ATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTA > SRR4302533.1485170/1‑94 (MQ=60)
TCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATT < SRR4302533.6019626/94‑1 (MQ=60)
TCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATT < SRR4302533.5988203/94‑1 (MQ=60)
ACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGC > SRR4302533.5438830/1‑94 (MQ=60)
ACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGC > SRR4302533.5789514/1‑94 (MQ=60)
CTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCC > SRR4302533.5857829/1‑94 (MQ=60)
TGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCA < SRR4302533.1241951/94‑1 (MQ=60)
TGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCA > SRR4302533.926184/1‑94 (MQ=60)
TGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCA > SRR4302533.5957482/1‑94 (MQ=60)
GCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTCTTGCCAT > SRR4302533.1835710/1‑94 (MQ=60)
GCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCAT > SRR4302533.3681037/1‑94 (MQ=60)
GCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCAT < SRR4302533.3787599/94‑1 (MQ=60)
TTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTA > SRR4302533.1172971/1‑94 (MQ=60)
TACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTAT < SRR4302533.666121/94‑1 (MQ=60)
ACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATC < SRR4302533.2652518/94‑1 (MQ=60)
ACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATC > SRR4302533.5349620/1‑94 (MQ=60)
CGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACTCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCG > SRR4302533.6279318/1‑94 (MQ=60)
CGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCG < SRR4302533.2510166/94‑1 (MQ=60)
CGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCG > SRR4302533.999895/1‑94 (MQ=60)
GTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGC > SRR4302533.1159438/1‑94 (MQ=60)
GTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCAATTATCGC > SRR4302533.3358118/1‑94 (MQ=60)
TTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCC > SRR4302533.5199806/1‑94 (MQ=60)
TTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCA > SRR4302533.2990713/1‑94 (MQ=60)
TTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCA < SRR4302533.1671575/94‑1 (MQ=60)
TGGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCA < SRR4302533.3494144/94‑1 (MQ=60)
TGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCAT > SRR4302533.1298904/1‑94 (MQ=60)
GTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATT < SRR4302533.6042378/94‑1 (MQ=60)
GTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATT < SRR4302533.4495738/94‑1 (MQ=60)
GTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATT > SRR4302533.4498805/1‑94 (MQ=60)
TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTG < SRR4302533.1491743/94‑1 (MQ=60)
TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTG < SRR4302533.4079638/94‑1 (MQ=60)
TTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTG < SRR4302533.5615848/94‑1 (MQ=60)
TCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAGCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGT < SRR4302533.2555166/94‑1 (MQ=60)
TCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGT < SRR4302533.5009717/94‑1 (MQ=60)
CCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTT > SRR4302533.2580550/1‑94 (MQ=60)
CGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTA > SRR4302533.3712147/1‑94 (MQ=60)
CGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTA > SRR4302533.5002959/1‑94 (MQ=60)
GGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTGTCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTAT > SRR4302533.3387808/1‑94 (MQ=60)
GGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTAT < SRR4302533.2838790/94‑1 (MQ=60)
GGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTAT < SRR4302533.3010439/94‑1 (MQ=60)
CCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCA < SRR4302533.1801439/94‑1 (MQ=60)
CGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCAT > SRR4302533.3650016/1‑94 (MQ=60)
CGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCAT < SRR4302533.1291083/94‑1 (MQ=60)
CGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCAT < SRR4302533.4109137/94‑1 (MQ=60)
CGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCAT > SRR4302533.889975/1‑94 (MQ=60)
CGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCAT > SRR4302533.1545121/1‑94 (MQ=60)
GACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATC > SRR4302533.5304257/1‑94 (MQ=60)
GACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATC > SRR4302533.130961/1‑94 (MQ=60)
GACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATC > SRR4302533.1576632/1‑94 (MQ=60)
CAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGT < SRR4302533.341985/94‑1 (MQ=60)
AGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTC > SRR4302533.3095328/1‑94 (MQ=60)
AGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTC < SRR4302533.3493983/94‑1 (MQ=60)
GCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCA < SRR4302533.4231561/94‑1 (MQ=60)
GCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCA < SRR4302533.2322650/94‑1 (MQ=60)
CCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCAT > SRR4302533.175813/1‑94 (MQ=60)
CCCCCGGAATAGCGCAGGCGTTGTTATCACCCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATC < SRR4302533.1209101/94‑1 (MQ=60)
CACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCA > SRR4302533.5162521/1‑94 (MQ=60)
ACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCAT > SRR4302533.5060542/1‑94 (MQ=60)
CGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTC < SRR4302533.6276198/94‑1 (MQ=60)
CGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTC < SRR4302533.184990/94‑1 (MQ=60)
CGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTC > SRR4302533.2385195/1‑94 (MQ=60)
GGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCT < SRR4302533.6093181/94‑1 (MQ=60)
GGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCT < SRR4302533.1077902/94‑1 (MQ=60)
GGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCT > SRR4302533.780165/1‑94 (MQ=60)
GGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCT < SRR4302533.5698350/94‑1 (MQ=60)
GGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCT > SRR4302533.557021/1‑94 (MQ=60)
GGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCT > SRR4302533.1818333/1‑94 (MQ=60)
GGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCT > SRR4302533.2579362/1‑94 (MQ=60)
GGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCT < SRR4302533.1931377/94‑1 (MQ=60)
GAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGGCCAGCGCCCGTTATTGCCATTACCGCCATTGTTATCATCGTCATCATTCTG < SRR4302533.982604/94‑1 (MQ=60)
GAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTG > SRR4302533.4096185/1‑94 (MQ=60)
AATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGA > SRR4302533.2162851/1‑94 (MQ=60)
AATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGA > SRR4302533.4394166/1‑94 (MQ=60)
TAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAAC < SRR4302533.728462/94‑1 (MQ=60)
TAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAAC < SRR4302533.554672/94‑1 (MQ=60)
TAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAAC < SRR4302533.1987960/94‑1 (MQ=60)
AGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACA > SRR4302533.1933969/1‑94 (MQ=60)
GCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAA < SRR4302533.1581939/94‑1 (MQ=60)
CGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAA > SRR4302533.6280716/1‑94 (MQ=60)
CGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAA > SRR4302533.3130659/1‑94 (MQ=60)
GCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAA < SRR4302533.2888781/94‑1 (MQ=60)
GCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAA < SRR4302533.2888782/94‑1 (MQ=60)
CAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAC < SRR4302533.420276/94‑1 (MQ=60)
CAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAC > SRR4302533.893717/1‑94 (MQ=60)
CAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAC > SRR4302533.4772484/1‑94 (MQ=60)
CAGGCGGTGTTACCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAAC < SRR4302533.4235009/94‑1 (MQ=60)
AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACC < SRR4302533.4364076/94‑1 (MQ=60)
AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACC < SRR4302533.4009698/94‑1 (MQ=60)
AGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACC < SRR4302533.5553377/94‑1 (MQ=60)
GGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCG < SRR4302533.3902209/94‑1 (MQ=60)
CGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGA > SRR4302533.2512884/1‑94 (MQ=60)
CGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGA > SRR4302533.5927005/1‑94 (MQ=60)
GTTGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAG < SRR4302533.2951429/94‑1 (MQ=60)
TGTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTG > SRR4302533.2633793/1‑94 (MQ=60)
GTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGT < SRR4302533.4652675/94‑1 (MQ=60)
GTTATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGT > SRR4302533.4188884/1‑94 (MQ=60)
TATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCC < SRR4302533.4419486/94‑1 (MQ=60)
TATCAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCC > SRR4302533.120596/1‑94 (MQ=60)
CAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAC > SRR4302533.5969160/1‑94 (MQ=60)
CAACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGAC > SRR4302533.348347/1‑94 (MQ=60)
AACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACA < SRR4302533.5849624/94‑1 (MQ=60)
ACCCGTCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAG < SRR4302533.2584013/94‑1 (MQ=60)
ACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAG > SRR4302533.4527556/1‑94 (MQ=60)
ACCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAG < SRR4302533.5127172/94‑1 (MQ=60)
CCCGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGC < SRR4302533.6137441/94‑1 (MQ=60)
CGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCT > SRR4302533.4397238/1‑94 (MQ=60)
CGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCT > SRR4302533.5778461/1‑94 (MQ=60)
CGGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCT < SRR4302533.686148/94‑1 (MQ=60)
GGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTC > SRR4302533.679238/1‑94 (MQ=60)
GGCAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTC < SRR4302533.3512715/94‑1 (MQ=60)
CAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCAC < SRR4302533.1059465/94‑1 (MQ=60)
CAACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCAC < SRR4302533.6091354/94‑1 (MQ=60)
AACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACG > SRR4302533.4578329/1‑94 (MQ=60)
AACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACG < SRR4302533.720021/94‑1 (MQ=60)
ACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGG > SRR4302533.2212763/1‑94 (MQ=60)
ACATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGG < SRR4302533.3948497/94‑1 (MQ=60)
ATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGACCAAAACCGGAGTGTCCGACAGCCTCACGGCC < SRR4302533.787067/94‑1 (MQ=60)
ATGGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCC > SRR4302533.5292175/1‑94 (MQ=60)
GGAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCT < SRR4302533.2634348/94‑1 (MQ=60)
GAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTG < SRR4302533.293893/94‑1 (MQ=60)
GAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTG > SRR4302533.2784106/1‑94 (MQ=60)
GAGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTG > SRR4302533.4409849/1‑94 (MQ=60)
AGGAGCCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGA > SRR4302533.4066766/1‑94 (MQ=60)
CCCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTT > SRR4302533.258324/1‑94 (MQ=60)
CCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTG > SRR4302533.1852821/1‑94 (MQ=60)
CCAGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTG > SRR4302533.4642734/1‑94 (MQ=60)
AGCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGCA > SRR4302533.3341812/1‑94 (MQ=60)
GCGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGCAA < SRR4302533.4297749/94‑1 (MQ=60)
|
ATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTATCAACCCGGCAACATGGAGGAGCCCAGTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGCAA > NC_000913/2768375‑2768559
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
