Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,778,911	T→C	T656A (ACT→GCT)	ypjA ←	putative ATP‑binding component of a transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,778,911	0	T	C	100.0%	1450.8 / NA	448	T656A (ACT→GCT)	ypjA	putative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (213/235); total (213/235)

Only 100 of 463 total aligned reads displayed.

CATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGTGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGC  >  NC_000913/2778821‑2779000

cATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAgcgc                                                                                         >  1:6405558/1‑93 (MQ=255)

cATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAgcgc                                                                                         >  2:5240932/1‑93 (MQ=255)

  tataCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCa                                                                                       >  2:9088439/1‑93 (MQ=255)

  tataCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCa                                                                                       >  1:9014312/1‑93 (MQ=255)

   ataCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCaa                                                                                      >  1:7569078/1‑93 (MQ=255)

   ataCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCaa                                                                                      <  1:6998719/93‑1 (MQ=255)

    taCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAAc                                                                                     >  2:5901970/1‑93 (MQ=255)

    taCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAAc                                                                                     <  1:332318/93‑1 (MQ=255)

     aCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACa                                                                                    >  2:4154604/1‑93 (MQ=255)

      ccGTTTGCTTGCCACATTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACAt                                                                                   <  1:8263665/93‑1 (MQ=255)

       cGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATc                                                                                  >  1:2432209/1‑93 (MQ=255)

        gTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCt                                                                                 >  2:8281173/1‑93 (MQ=255)

          ttgcttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCttt                                                                               <  1:1675465/93‑1 (MQ=255)

            gcttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTc                                                                             <  1:344876/93‑1 (MQ=255)

             cttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTcc                                                                            <  1:6041951/93‑1 (MQ=255)

              ttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCa                                                                           >  1:7121540/1‑93 (MQ=255)

              ttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCa                                                                           >  2:7726932/1‑93 (MQ=255)

              ttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCa                                                                           <  1:9610579/93‑1 (MQ=255)

               tgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCAt                                                                          >  1:5587807/1‑93 (MQ=255)

                 ccACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATaa                                                                        <  1:4950959/93‑1 (MQ=255)

                  cACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATaaa                                                                       >  2:96208/1‑93 (MQ=255)

                   aCCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAAc                                                                      >  2:5160817/1‑93 (MQ=255)

                    ccTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACa                                                                     <  2:5666478/93‑1 (MQ=255)

                     cTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACAt                                                                    <  2:1018044/93‑1 (MQ=255)

                      tttGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATc                                                                   <  1:4489131/93‑1 (MQ=255)

                      tttGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATc                                                                   <  2:6279179/93‑1 (MQ=255)

                        tGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCa                                                                 >  2:4541961/1‑93 (MQ=255)

                        tGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCa                                                                 >  2:1835995/1‑93 (MQ=255)

                        tGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCa                                                                 <  1:3644350/93‑1 (MQ=255)

                        tGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCa                                                                 <  2:8007184/93‑1 (MQ=255)

                         gATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAt                                                                >  1:4614729/1‑93 (MQ=255)

                         gATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAt                                                                >  1:2789300/1‑93 (MQ=255)

                           tatTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAttt                                                              >  2:2091427/1‑93 (MQ=255)

                           tatTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAttt                                                              >  1:8915221/1‑93 (MQ=255)

                           tatTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAttt                                                              <  1:1112091/93‑1 (MQ=255)

                           tatTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAttt                                                              <  1:3942453/93‑1 (MQ=255)

                            atTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAtttt                                                             <  2:5338580/93‑1 (MQ=255)

                             tttGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTg                                                            <  2:1445857/93‑1 (MQ=255)

                             tttGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTg                                                            >  2:123035/1‑93 (MQ=255)

                                gCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCg                                                         >  1:8604664/1‑93 (MQ=255)

                                 cTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGt                                                        <  2:2637881/93‑1 (MQ=255)

                                   ttATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTg                                                      >  1:1896537/1‑93 (MQ=255)

                                   ttATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTg                                                      <  2:5940017/93‑1 (MQ=255)

                                     aTCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGc                                                    <  2:1997646/93‑1 (MQ=255)

                                       cAGAAGTGGCACTGGCATATATGGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCAt                                                  <  2:9838704/93‑1 (MQ=255)

                                        aGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCAtt                                                 >  1:101660/1‑93 (MQ=255)

                                           aGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaat                                              <  2:6044681/93‑1 (MQ=255)

                                           aGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaat                                              <  2:551155/93‑1 (MQ=255)

                                           aGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaat                                              <  1:8727470/93‑1 (MQ=255)

                                             tGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaataa                                            <  2:4820400/93‑1 (MQ=255)

                                              ggCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTaataat                                           <  2:2663960/93‑1 (MQ=255)

                                               gCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATc                                          <  2:8099938/93‑1 (MQ=255)

                                                cACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCg                                         <  2:7232358/93‑1 (MQ=255)

                                                 aCTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCgt                                        >  1:1350668/1‑93 (MQ=255)

                                                 aCTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCgt                                        <  1:7484174/93‑1 (MQ=255)

                                                   tGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCgtgt                                      >  1:4870971/1‑93 (MQ=255)

                                                     gCATATATTGTTTGGGTGCCAGCACTACTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCa                                    >  2:2253827/1‑93 (MQ=255)

                                                      cATATATTTTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCaa                                   <  2:8886239/93‑1 (MQ=255)

                                                      cATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCaa                                   <  2:496677/93‑1 (MQ=255)

                                                      cATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCaa                                   <  2:9311044/93‑1 (MQ=255)

                                                      cATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCaa                                   >  1:9340425/1‑93 (MQ=255)

                                                       atatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAAc                                  >  1:6504246/1‑93 (MQ=255)

                                                       atatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAAc                                  <  1:505813/93‑1 (MQ=255)

                                                        tatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACt                                 >  2:2334277/1‑93 (MQ=255)

                                                        tatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACt                                 >  2:4675042/1‑93 (MQ=255)

                                                        tatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACt                                 >  1:7339905/1‑93 (MQ=255)

                                                         atatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTg                                <  2:755532/93‑1 (MQ=255)

                                                           atTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCACAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTgcg                              >  2:9485427/1‑93 (MQ=255)

                                                             tGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGcgcg                            <  2:581138/93‑1 (MQ=255)

                                                             tGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGcgcg                            <  2:6475489/93‑1 (MQ=255)

                                                             tGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGcgcg                            <  2:6628573/93‑1 (MQ=255)

                                                              gTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCgg                           <  1:2934387/93‑1 (MQ=255)

                                                               tttGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCggg                          <  1:4126849/93‑1 (MQ=255)

                                                                ttGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGa                         <  1:3821617/93‑1 (MQ=255)

                                                                  gggTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAAc                       <  1:5258102/93‑1 (MQ=255)

                                                                    gTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCa                     >  2:932954/1‑93 (MQ=255)

                                                                    gTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCa                     <  2:824950/93‑1 (MQ=255)

                                                                     tGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAg                    >  1:7829136/1‑93 (MQ=255)

                                                                     tGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAg                    <  2:4421851/93‑1 (MQ=255)

                                                                       ccAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTg                  >  1:9824954/1‑93 (MQ=255)

                                                                       ccAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTg                  >  1:995291/1‑93 (MQ=255)

                                                                         aGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgac                <  1:2216281/93‑1 (MQ=255)

                                                                         aGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgac                <  1:6235280/93‑1 (MQ=255)

                                                                           cACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgacga              <  2:8420298/93‑1 (MQ=255)

                                                                            aCTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgacgac             <  1:8036853/93‑1 (MQ=255)

                                                                            aCTATTGAGTACAGCGCCAACATCTTTTCAATAAACATCCATTTTGCCGGTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgacgac             <  2:3773773/93‑1 (MQ=255)

                                                                             cTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACt            >  2:6831728/1‑93 (MQ=255)

                                                                              tATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTg           >  1:947645/1‑93 (MQ=255)

                                                                              tATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTg           >  2:3098178/1‑93 (MQ=255)

                                                                              tATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGCGCACCAGTGACGTCTg           >  2:708281/1‑93 (MQ=255)

                                                                                ttGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGtt         >  1:2128865/1‑93 (MQ=255)

                                                                                ttGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGtt         <  1:5831896/93‑1 (MQ=255)

                                                                                ttGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGtt         >  1:7705894/1‑93 (MQ=255)

                                                                                 tGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTa        <  2:3487427/93‑1 (MQ=255)

                                                                                  gAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTaa       <  1:6787114/93‑1 (MQ=255)

                                                                                   aGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAAt      <  2:2388555/93‑1 (MQ=255)

                                                                                    gTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATg     >  2:941169/1‑93 (MQ=255)

                                                                                      aCAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAg   >  2:3295602/1‑93 (MQ=255)

                                                                                       cAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGc  <  2:7475237/93‑1 (MQ=255)

                                                                                       cAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGc  <  2:859167/93‑1 (MQ=255)

CATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGTGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGC  >  NC_000913/2778821‑2779000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 237 total aligned reads displayed.

AACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGTGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAGC  >  NC_000913/2778818‑2779004

AACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGC                                                                                               >  SRR4302540.5185598/1‑94 (MQ=60)

AACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGC                                                                                               <  SRR4302540.545013/94‑1 (MQ=60)

 AGCATATCCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCG                                                                                              <  SRR4302540.7610908/94‑1 (MQ=60)

 ACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCG                                                                                              <  SRR4302540.2039762/94‑1 (MQ=60)

 ACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCG                                                                                              <  SRR4302540.4742464/94‑1 (MQ=60)

 ACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCG                                                                                              <  SRR4302540.7610907/94‑1 (MQ=60)

 ACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCG                                                                                              <  SRR4302540.8918663/94‑1 (MQ=60)

 ACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCG                                                                                              <  SRR4302540.8918670/94‑1 (MQ=60)

  CCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGC                                                                                             <  SRR4302540.4643854/94‑1 (MQ=60)

  CCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGC                                                                                             <  SRR4302540.3851035/94‑1 (MQ=60)

   CATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCC                                                                                            >  SRR4302540.2783662/1‑94 (MQ=60)

   CATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCC                                                                                            <  SRR4302540.7143818/94‑1 (MQ=60)

   CATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCC                                                                                            <  SRR4302540.8779745/94‑1 (MQ=60)

   CATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCC                                                                                            >  SRR4302540.6307915/1‑94 (MQ=60)

   CATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCC                                                                                            >  SRR4302540.6307914/1‑94 (MQ=60)

   CATATACCGTTTGCTTGCCACCTTTGATAATTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCC                                                                                            <  SRR4302540.7143817/94‑1 (MQ=60)

    ATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCA                                                                                           >  SRR4302540.8752800/1‑94 (MQ=60)

    ATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCA                                                                                           >  SRR4302540.9122466/1‑94 (MQ=60)

    ATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCA                                                                                           >  SRR4302540.9700105/1‑94 (MQ=60)

    ATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCA                                                                                           >  SRR4302540.4494081/1‑94 (MQ=60)

     TATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAA                                                                                          >  SRR4302540.7653989/1‑94 (MQ=60)

      ATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAAC                                                                                         <  SRR4302540.7076390/94‑1 (MQ=60)

      ATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAAC                                                                                         >  SRR4302540.9901769/1‑94 (MQ=60)

      ATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAAC                                                                                         >  SRR4302540.6034022/1‑94 (MQ=60)

      ATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAAC                                                                                         >  SRR4302540.9512127/1‑94 (MQ=60)

       TACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACA                                                                                        <  SRR4302540.335665/94‑1 (MQ=60)

       TACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACA                                                                                        >  SRR4302540.4952720/1‑94 (MQ=60)

       TACCGTTTGCGTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACA                                                                                        <  SRR4302540.335667/94‑1 (MQ=60)

         CCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATC                                                                                      >  SRR4302540.2458413/1‑94 (MQ=60)

         CCGTTTGCTTGCCACATTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATC                                                                                      <  SRR4302540.8359690/94‑1 (MQ=60)

           GTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTT                                                                                    >  SRR4302540.5909221/1‑94 (MQ=60)

            TTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTT                                                                                   >  SRR4302540.5574107/1‑94 (MQ=60)

             TTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTT                                                                                  <  SRR4302540.7252591/94‑1 (MQ=60)

             TTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTT                                                                                  <  SRR4302540.9045629/94‑1 (MQ=60)

             TTGCTTGCCACCTATGATATTGGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTT                                                                                  <  SRR4302540.9045630/94‑1 (MQ=60)

              TGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTC                                                                                 >  SRR4302540.6265616/1‑94 (MQ=60)

               GCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCC                                                                                <  SRR4302540.348380/94‑1 (MQ=60)

                CTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCA                                                                               <  SRR4302540.8754341/94‑1 (MQ=60)

                CTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCA                                                                               <  SRR4302540.3576902/94‑1 (MQ=60)

                CTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCA                                                                               <  SRR4302540.6109055/94‑1 (MQ=60)

                CTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTCCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCA                                                                               <  SRR4302540.1760978/94‑1 (MQ=60)

                 TTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCAT                                                                              <  SRR4302540.1382740/94‑1 (MQ=60)

                 TTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCAT                                                                              >  SRR4302540.5649307/1‑94 (MQ=60)

                 TTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCAT                                                                              >  SRR4302540.3154077/1‑94 (MQ=60)

                 TTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCAT                                                                              <  SRR4302540.9485835/94‑1 (MQ=60)

                 TTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCAT                                                                              <  SRR4302540.7859080/94‑1 (MQ=60)

                   GCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAA                                                                            >  SRR4302540.3622720/1‑94 (MQ=60)

                    CCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAA                                                                           <  SRR4302540.5004445/94‑1 (MQ=60)

                    CCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAA                                                                           <  SRR4302540.2864112/94‑1 (MQ=60)

                    CCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAA                                                                           >  SRR4302540.6441899/1‑94 (MQ=60)

                    CCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAA                                                                           >  SRR4302540.9593407/1‑94 (MQ=60)

                     CACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAAC                                                                          >  SRR4302540.7303717/1‑94 (MQ=60)

                     CACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCAAGCACTCTTGAGTACAGCGCCAACATCTTTTCCATAAAC                                                                          >  SRR4302540.1009802/1‑94 (MQ=60)

                      ACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACA                                                                         <  SRR4302540.1241764/94‑1 (MQ=60)

                      ACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACA                                                                         >  SRR4302540.1445566/1‑94 (MQ=60)

                       CCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACAT                                                                        >  SRR4302540.7989237/1‑94 (MQ=60)

                       CCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACAT                                                                        <  SRR4302540.218606/94‑1 (MQ=60)

                        CTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATC                                                                       >  SRR4302540.2235575/1‑94 (MQ=60)

                        CTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATC                                                                       >  SRR4302540.9840328/1‑94 (MQ=60)

                         TTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCC                                                                      >  SRR4302540.7996589/1‑94 (MQ=60)

                          TTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCA                                                                     >  SRR4302540.5099918/1‑94 (MQ=60)

                           TGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATACACATCCAT                                                                    >  SRR4302540.10065314/1‑94 (MQ=60)

                           TGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAT                                                                    <  SRR4302540.3684268/94‑1 (MQ=60)

                           TGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAT                                                                    >  SRR4302540.2819418/1‑94 (MQ=60)

                           TGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAT                                                                    <  SRR4302540.7320494/94‑1 (MQ=60)

                            GATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATT                                                                   <  SRR4302540.3838605/94‑1 (MQ=60)

                             ATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTT                                                                  <  SRR4302540.7576029/94‑1 (MQ=60)

                             ATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTT                                                                  >  SRR4302540.7684459/1‑94 (MQ=60)

                             ATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTT                                                                  >  SRR4302540.9018466/1‑94 (MQ=60)

                              TATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTT                                                                 >  SRR4302540.8961237/1‑94 (MQ=60)

                              TATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTT                                                                 <  SRR4302540.5237182/94‑1 (MQ=60)

                              TATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTT                                                                 <  SRR4302540.5237183/94‑1 (MQ=60)

                              TATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTT                                                                 <  SRR4302540.1123605/94‑1 (MQ=60)

                              TATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTT                                                                 <  SRR4302540.3985039/94‑1 (MQ=60)

                               ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTG                                                                >  SRR4302540.392610/1‑94 (MQ=60)

                               ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTG                                                                >  SRR4302540.776641/1‑94 (MQ=60)

                               ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTG                                                                >  SRR4302540.3415861/1‑94 (MQ=60)

                               ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTG                                                                <  SRR4302540.1981179/94‑1 (MQ=60)

                               ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTG                                                                >  SRR4302540.8348920/1‑94 (MQ=60)

                                TTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGC                                                               <  SRR4302540.5840429/94‑1 (MQ=60)

                                TTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGC                                                               >  SRR4302540.492785/1‑94 (MQ=60)

                                 TTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCC                                                              >  SRR4302540.1875373/1‑94 (MQ=60)

                                 TTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCC                                                              <  SRR4302540.5027783/94‑1 (MQ=60)

                                 TTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCC                                                              <  SRR4302540.5027784/94‑1 (MQ=60)

                                  TGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCG                                                             >  SRR4302540.8704658/1‑94 (MQ=60)

                                   GCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGT                                                            >  SRR4302540.4554836/1‑94 (MQ=60)

                                    CTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTT                                                           >  SRR4302540.3553489/1‑94 (MQ=60)

                                     TTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTG                                                          <  SRR4302540.6937396/94‑1 (MQ=60)

                                     TTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTG                                                          >  SRR4302540.5287271/1‑94 (MQ=60)

                                     TTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTG                                                          >  SRR4302540.1030460/1‑94 (MQ=60)

                                     TTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTG                                                          >  SRR4302540.1917288/1‑94 (MQ=60)

                                      TTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGG                                                         <  SRR4302540.1045985/94‑1 (MQ=60)

                                        ATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCA                                                       >  SRR4302540.4891721/1‑94 (MQ=60)

                                        ATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCA                                                       <  SRR4302540.7567273/94‑1 (MQ=60)

                                         TCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCAT                                                      <  SRR4302540.1184260/94‑1 (MQ=60)

                                         TCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCAT                                                      <  SRR4302540.8951648/94‑1 (MQ=60)

                                         TCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCAT                                                      <  SRR4302540.650403/94‑1 (MQ=60)

                                         TCAGAAGTGGCACTGGCATATATTGTTTGGGTGCAAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCAT                                                      <  SRR4302540.46810/94‑1 (MQ=60)

                                          CAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATT                                                     >  SRR4302540.102740/1‑94 (MQ=60)

                                           AGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTA                                                    <  SRR4302540.7153563/94‑1 (MQ=60)

                                              AGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATA                                                 <  SRR4302540.8828817/94‑1 (MQ=60)

                                              AGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATA                                                 <  SRR4302540.8513425/94‑1 (MQ=60)

                                              AGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATA                                                 <  SRR4302540.8352025/94‑1 (MQ=60)

                                               GTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAA                                                >  SRR4302540.7620310/1‑94 (MQ=60)

                                                TGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAAT                                               <  SRR4302540.9587624/94‑1 (MQ=60)

                                                TGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAAT                                               <  SRR4302540.7815214/94‑1 (MQ=60)

                                                 GGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATC                                              <  SRR4302540.1806278/94‑1 (MQ=60)

                                                 GGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATC                                              <  SRR4302540.9290981/94‑1 (MQ=60)

                                                   CACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGT                                            >  SRR4302540.1364870/1‑94 (MQ=60)

                                                   CACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGT                                            >  SRR4302540.4120650/1‑94 (MQ=60)

                                                    ACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTG                                           >  SRR4302540.3836323/1‑94 (MQ=60)

                                                    ACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTG                                           <  SRR4302540.7567715/94‑1 (MQ=60)

                                                     CTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGT                                          >  SRR4302540.4923229/1‑94 (MQ=60)

                                                     CTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGT                                          >  SRR4302540.5874068/1‑94 (MQ=60)

                                                     CTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGT                                          >  SRR4302540.8138074/1‑94 (MQ=60)

                                                       GGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCA                                        <  SRR4302540.2289039/94‑1 (MQ=60)

                                                       GGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCA                                        <  SRR4302540.6758084/94‑1 (MQ=60)

                                                        GCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAA                                       >  SRR4302540.9451739/1‑94 (MQ=60)

                                                        GCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAA                                       >  SRR4302540.3318718/1‑94 (MQ=60)

                                                         CATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAAC                                      <  SRR4302540.9921929/94‑1 (MQ=60)

                                                         CATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAAC                                      <  SRR4302540.8435560/94‑1 (MQ=60)

                                                         CATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAAC                                      <  SRR4302540.10067964/94‑1 (MQ=60)

                                                         CATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAAC                                      >  SRR4302540.6576540/1‑94 (MQ=60)

                                                          ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT                                     >  SRR4302540.7421811/1‑94 (MQ=60)

                                                          ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT                                     >  SRR4302540.447683/1‑94 (MQ=60)

                                                          ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT                                     <  SRR4302540.4796034/94‑1 (MQ=60)

                                                          ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT                                     <  SRR4302540.6910338/94‑1 (MQ=60)

                                                          ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT                                     <  SRR4302540.511229/94‑1 (MQ=60)

                                                           TATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTG                                    >  SRR4302540.3979798/1‑94 (MQ=60)

                                                            ATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGC                                   <  SRR4302540.4651942/94‑1 (MQ=60)

                                                            ATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGC                                   <  SRR4302540.4651941/94‑1 (MQ=60)

                                                             TATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCG                                  <  SRR4302540.2572927/94‑1 (MQ=60)

                                                             TATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCG                                  <  SRR4302540.4410647/94‑1 (MQ=60)

                                                                 GTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGG                              <  SRR4302540.2966587/94‑1 (MQ=60)

                                                                 GTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGG                              <  SRR4302540.282743/94‑1 (MQ=60)

                                                                  TTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGA                             <  SRR4302540.4171434/94‑1 (MQ=60)

                                                                   TTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAA                            <  SRR4302540.3863211/94‑1 (MQ=60)

                                                                    TGGGTGCCAGCACTATTGAGTCCAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGATGGCATTAATAATCGTGTCAACTGCGCGGGAAC                           <  SRR4302540.7302182/94‑1 (MQ=60)

                                                                     GGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACC                          <  SRR4302540.2068443/94‑1 (MQ=60)

                                                                     GGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACC                          <  SRR4302540.5315474/94‑1 (MQ=60)

                                                                      GGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCA                         <  SRR4302540.1197058/94‑1 (MQ=60)

                                                                      GGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCA                         <  SRR4302540.8085956/94‑1 (MQ=60)

                                                                      GGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCA                         <  SRR4302540.6606658/94‑1 (MQ=60)

                                                                       GTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAG                        <  SRR4302540.9718973/94‑1 (MQ=60)

                                                                       GTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAG                        >  SRR4302540.7920621/1‑94 (MQ=60)

                                                                        TGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGT                       <  SRR4302540.7534571/94‑1 (MQ=60)

                                                                        TGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGT                       <  SRR4302540.7534572/94‑1 (MQ=60)

                                                                         GCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTG                      >  SRR4302540.9939896/1‑94 (MQ=60)

                                                                         GCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTG                      <  SRR4302540.7841698/94‑1 (MQ=60)

                                                                         GCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTG                      >  SRR4302540.6556660/1‑94 (MQ=60)

                                                                         GCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTG                      >  SRR4302540.6556659/1‑94 (MQ=60)

                                                                         GCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTG                      <  SRR4302540.2955179/94‑1 (MQ=60)

                                                                         GCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTG                      >  SRR4302540.5372263/1‑94 (MQ=60)

                                                                         GCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTG                      <  SRR4302540.488096/94‑1 (MQ=60)

                                                                         GCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTG                      >  SRR4302540.1005427/1‑94 (MQ=60)

                                                                           CAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGAC                    <  SRR4302540.8840758/94‑1 (MQ=60)

                                                                           CAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGAC                    <  SRR4302540.6070397/94‑1 (MQ=60)

                                                                           CAGCACTATTGAG‑ACAGCGCCAACATCTTTTCCCTAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACG                   >  SRR4302540.2342880/1‑94 (MQ=60)

                                                                            AGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACG                   <  SRR4302540.2240197/94‑1 (MQ=60)

                                                                            AGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACG                   <  SRR4302540.2240198/94‑1 (MQ=60)

                                                                            AGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACG                   <  SRR4302540.6304630/94‑1 (MQ=60)

                                                                             GCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGA                  <  SRR4302540.1650876/94‑1 (MQ=60)

                                                                              CACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGAC                 >  SRR4302540.3813941/1‑94 (MQ=60)

                                                                              CACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTCTGCCGTTGGCATTAATACTCGTGTCAACTGCGCGGGAACCAGTGACGAC                 <  SRR4302540.4038410/94‑1 (MQ=60)

                                                                               ACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACT                <  SRR4302540.8130262/94‑1 (MQ=60)

                                                                               ACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACT                >  SRR4302540.9035750/1‑94 (MQ=60)

                                                                               ACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACT                <  SRR4302540.2524407/94‑1 (MQ=60)

                                                                                CTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTG               >  SRR4302540.957514/1‑94 (MQ=60)

                                                                                CTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTG               >  SRR4302540.9175763/1‑94 (MQ=60)

                                                                                CTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTG               >  SRR4302540.1810250/1‑94 (MQ=60)

                                                                                CTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTG               >  SRR4302540.6529309/1‑94 (MQ=60)

                                                                                  ATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTT             >  SRR4302540.7794184/1‑94 (MQ=60)

                                                                                  ATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTT             <  SRR4302540.4027918/94‑1 (MQ=60)

                                                                                  ATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTT             >  SRR4302540.2151707/1‑94 (MQ=60)

                                                                                   TTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTA            <  SRR4302540.5896378/94‑1 (MQ=60)

                                                                                    TGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAA           >  SRR4302540.2051746/1‑94 (MQ=60)

                                                                                    TGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAA           <  SRR4302540.443038/94‑1 (MQ=60)

                                                                                    TGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAA           >  SRR4302540.64054/1‑94 (MQ=60)

                                                                                     GAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGGCGACTGTTAAT          <  SRR4302540.7674041/94‑1 (MQ=60)

                                                                                     GAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAAT          <  SRR4302540.6862170/94‑1 (MQ=60)

                                                                                     GAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAAT          <  SRR4302540.6862169/94‑1 (MQ=60)

                                                                                       GTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGA        <  SRR4302540.9861006/94‑1 (MQ=60)

                                                                                       GTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGA        >  SRR4302540.3577647/1‑94 (MQ=60)

                                                                                       GTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGA        <  SRR4302540.9325976/94‑1 (MQ=60)

                                                                                       GTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGA        >  SRR4302540.6157326/1‑94 (MQ=60)

                                                                                        TACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAG       >  SRR4302540.3206492/1‑94 (MQ=60)

                                                                                         ACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGC      <  SRR4302540.5775333/94‑1 (MQ=60)

                                                                                           AGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCA    >  SRR4302540.7176282/1‑94 (MQ=60)

                                                                                            GCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAG   <  SRR4302540.5965731/94‑1 (MQ=60)

                                                                                            GCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAG   >  SRR4302540.5366120/1‑94 (MQ=60)

                                                                                            GCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAG   >  SRR4302540.5366119/1‑94 (MQ=60)

                                                                                            GCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAG   >  SRR4302540.5366118/1‑94 (MQ=60)

                                                                                            GCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAG   <  SRR4302540.2093300/94‑1 (MQ=60)

                                                                                            GCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAG   <  SRR4302540.1527608/94‑1 (MQ=60)

                                                                                            GCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAG   <  SRR4302540.1527609/94‑1 (MQ=60)

                                                                                             CGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAGC  <  SRR4302540.7178281/94‑1 (MQ=60)

                                                                                             CGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAGC  <  SRR4302540.5819358/94‑1 (MQ=60)

                                                                                             CGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAGC  <  SRR4302540.8587230/94‑1 (MQ=60)

                                                                                             CGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAGC  <  SRR4302540.4597107/94‑1 (MQ=60)

                                                                                             CGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATGAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAGC  <  SRR4302540.5965989/94‑1 (MQ=60)

AACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGTGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAGC  >  NC_000913/2778818‑2779004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`