Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,778,911 |
T→C |
T656A (ACT→GCT) |
ypjA ← |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,778,911 | 0 | T | C | 100.0%
| 835.0
/ NA
| 257 | T656A (ACT→GCT) | ypjA | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (106/151); total (106/151) |
Only 100 of 262 total aligned reads displayed.
CATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGTGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAG > NC_000913/2778821‑2778999
|
cATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAgcgc > 1:1211067/1‑93 (MQ=255)
cATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAgcgc > 1:3850860/1‑93 (MQ=255)
ataCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCaa < 2:4528443/93‑1 (MQ=255)
ataCCGTTTGCTTGCCACCTGTGATATTTGCTTGATCAGAATGGGCACTGGCTTATATTGTATTTGTGCCAGCATTTTTGAGTACAGCGCCaa > 2:6297861/1‑93 (MQ=255)
aCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACa < 1:4859542/93‑1 (MQ=255)
aCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACa > 1:5619020/1‑93 (MQ=255)
aCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACa < 1:1842483/93‑1 (MQ=255)
gTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCt > 1:2300137/1‑93 (MQ=255)
tttGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCtt > 2:5699943/1‑93 (MQ=255)
tttGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCtt < 1:495584/93‑1 (MQ=255)
tttGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCtt > 1:4908605/1‑93 (MQ=255)
tttGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCtt > 2:5321708/1‑93 (MQ=255)
tgcttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCtttt < 2:493475/93‑1 (MQ=255)
gcttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCCTATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTc < 2:6214546/93‑1 (MQ=255)
gcttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTc < 1:430884/93‑1 (MQ=255)
gcttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTc < 1:570395/93‑1 (MQ=255)
cttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTcc < 2:5171533/93‑1 (MQ=255)
tgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCAt < 2:4443729/93‑1 (MQ=255)
gcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTAGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATa < 1:3378672/93‑1 (MQ=255)
gcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTGTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATa < 1:6195492/93‑1 (MQ=255)
ccACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATaa < 1:366117/93‑1 (MQ=255)
ccACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATaa > 1:4130054/1‑93 (MQ=255)
ccACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTGTTCCATaa < 2:6155981/93‑1 (MQ=255)
cACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATaaa > 2:1330894/1‑93 (MQ=255)
cACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATaaa < 2:644973/93‑1 (MQ=255)
cACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATaaa < 2:1570322/93‑1 (MQ=255)
aCCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAAc > 1:5368082/1‑93 (MQ=255)
aCCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAAc < 1:4503696/93‑1 (MQ=255)
ccTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCCTAAACa > 1:3016841/1‑93 (MQ=255)
ccTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACa < 2:4686709/93‑1 (MQ=255)
ccTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACa < 2:872918/93‑1 (MQ=255)
ccTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACa < 1:1727138/93‑1 (MQ=255)
cTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACAt > 1:3240096/1‑93 (MQ=255)
ttGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATcc > 2:3620896/1‑93 (MQ=255)
tGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCa < 1:2237647/93‑1 (MQ=255)
tGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCa > 2:1735324/1‑93 (MQ=255)
tGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCa < 2:1535795/93‑1 (MQ=255)
gATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAt < 1:1513055/93‑1 (MQ=255)
gATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAt < 2:1654333/93‑1 (MQ=255)
gATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAt < 2:1118572/93‑1 (MQ=255)
tatTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAttt < 1:201603/93‑1 (MQ=255)
tatTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAttt < 2:1240463/93‑1 (MQ=255)
atTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAtttt > 1:5012093/1‑93 (MQ=255)
atTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAtttt < 1:5156391/93‑1 (MQ=255)
atTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAtttt > 2:219120/1‑93 (MQ=255)
tGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGcc < 2:2428955/93‑1 (MQ=255)
tGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGcc > 1:4103290/1‑93 (MQ=255)
cTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGt < 1:859599/93‑1 (MQ=255)
tttATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGtt < 2:765413/93‑1 (MQ=255)
tttATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGtt < 2:284026/93‑1 (MQ=255)
ttATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTg < 1:3491362/93‑1 (MQ=255)
ttATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTg < 2:2925236/93‑1 (MQ=255)
tCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGNCa > 1:4297116/1‑93 (MQ=255)
tCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCa < 2:2800917/93‑1 (MQ=255)
cAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCAt < 2:3599965/93‑1 (MQ=255)
aGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCAtt > 2:3985100/1‑93 (MQ=255)
aGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaat < 2:1835537/93‑1 (MQ=255)
aGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaat < 1:3877749/93‑1 (MQ=255)
ggCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAACCATCCATTTTGCCGTTGGCATTaataat < 1:6009101/93‑1 (MQ=255)
ggCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTaataat < 1:4634090/93‑1 (MQ=255)
ggCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTaataat < 2:4337375/93‑1 (MQ=255)
ggCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTaataat < 2:2688512/93‑1 (MQ=255)
gCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATc < 2:5500187/93‑1 (MQ=255)
gCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGCACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAatcatc > 1:5996800/1‑93 (MQ=255)
aCTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCgt > 1:77064/1‑93 (MQ=255)
aCTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCgt < 2:812181/93‑1 (MQ=255)
ggCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTc > 2:5387927/1‑93 (MQ=255)
atatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAAc < 1:1633773/93‑1 (MQ=255)
atatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAAc < 1:6128253/93‑1 (MQ=255)
tatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACt > 2:3494345/1‑93 (MQ=255)
tatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACt < 2:6110890/93‑1 (MQ=255)
tatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACt > 1:2663743/1‑93 (MQ=255)
atatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTAGCATTAATAATCGTGTCAACTg > 1:432736/1‑93 (MQ=255)
tatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTgc > 2:4281063/1‑93 (MQ=255)
tatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTgc > 1:1929598/1‑93 (MQ=255)
tatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTgc < 2:3011507/93‑1 (MQ=255)
tGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGcgcg < 1:5903548/93‑1 (MQ=255)
gTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCgg > 1:1374260/1‑93 (MQ=255)
gTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCgg < 2:2140897/93‑1 (MQ=255)
tttGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCggg < 2:4139776/93‑1 (MQ=255)
tttGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCggg > 2:2509424/1‑93 (MQ=255)
ttGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGa < 2:3521845/93‑1 (MQ=255)
gTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCa < 2:3703682/93‑1 (MQ=255)
tGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAg > 2:3411044/1‑93 (MQ=255)
tGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAg < 1:3434755/93‑1 (MQ=255)
aGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgac > 1:195178/1‑93 (MQ=255)
aGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgac > 2:5959119/1‑93 (MQ=255)
gCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgacg > 1:1140701/1‑93 (MQ=255)
aCTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgacgac < 2:410669/93‑1 (MQ=255)
tATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTg < 1:2473679/93‑1 (MQ=255)
aTTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGt < 2:4714150/93‑1 (MQ=255)
aTTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGt > 2:5576373/1‑93 (MQ=255)
aTTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGt < 1:6249135/93‑1 (MQ=255)
gAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTaa > 2:4881702/1‑93 (MQ=255)
gAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTaa < 2:5882261/93‑1 (MQ=255)
gAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTaa < 1:250052/93‑1 (MQ=255)
gAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTaa < 2:3240136/93‑1 (MQ=255)
tACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGa < 2:3888271/93‑1 (MQ=255)
tACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGa < 1:919028/93‑1 (MQ=255)
aCAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAg < 2:810297/93‑1 (MQ=255)
|
CATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGTGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAG > NC_000913/2778821‑2778999
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGTGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAGC > NC_000913/2778819‑2779004
|
ACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCG < SRR4302533.3952620/94‑1 (MQ=60)
ACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCG > SRR4302533.74740/1‑94 (MQ=60)
ACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGAG > SRR4302533.3015593/1‑94 (MQ=60)
CCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGC > SRR4302533.3874372/1‑94 (MQ=60)
CCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGC > SRR4302533.1218336/1‑94 (MQ=60)
ATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAAC > SRR4302533.1970383/1‑94 (MQ=60)
ATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAAC > SRR4302533.869399/1‑94 (MQ=60)
TACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACA > SRR4302533.5652982/1‑94 (MQ=60)
TACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACA < SRR4302533.457755/94‑1 (MQ=60)
ACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACAT < SRR4302533.4888998/94‑1 (MQ=60)
ACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACAT < SRR4302533.1853719/94‑1 (MQ=60)
ACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACAT < SRR4302533.4135530/94‑1 (MQ=60)
CGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCT < SRR4302533.3558890/94‑1 (MQ=60)
CGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCT > SRR4302533.2314393/1‑94 (MQ=60)
CGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCT < SRR4302533.5568287/94‑1 (MQ=60)
CGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCT > SRR4302533.1943746/1‑94 (MQ=60)
GTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTT > SRR4302533.3260102/1‑94 (MQ=60)
GTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTT > SRR4302533.4938345/1‑94 (MQ=60)
TTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTT < SRR4302533.2628210/94‑1 (MQ=60)
TTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTT < SRR4302533.498540/94‑1 (MQ=60)
TTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTT > SRR4302533.2328222/1‑94 (MQ=60)
TTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTT < SRR4302533.1678640/94‑1 (MQ=60)
TGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTC > SRR4302533.6261287/1‑94 (MQ=60)
GCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCC < SRR4302533.573763/94‑1 (MQ=60)
GCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCC < SRR4302533.4332604/94‑1 (MQ=60)
GCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCC < SRR4302533.433453/94‑1 (MQ=60)
TTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCAT < SRR4302533.1236131/94‑1 (MQ=60)
GCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAA > SRR4302533.4155124/1‑94 (MQ=60)
GCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAA > SRR4302533.2836092/1‑94 (MQ=60)
GCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTAGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAA < SRR4302533.3399530/94‑1 (MQ=60)
GCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTGTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAA < SRR4302533.6232663/94‑1 (MQ=60)
CCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAA < SRR4302533.368334/94‑1 (MQ=60)
CACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAAC > SRR4302533.5400330/1‑94 (MQ=60)
ACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCCTAAACA > SRR4302533.3035293/1‑94 (MQ=60)
ACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACA < SRR4302533.4530979/94‑1 (MQ=60)
CCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACAT > SRR4302533.3260062/1‑94 (MQ=60)
CCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACAT < SRR4302533.1737620/94‑1 (MQ=60)
CTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATC < SRR4302533.4380372/94‑1 (MQ=60)
TGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAT > SRR4302533.4693396/1‑94 (MQ=60)
TGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAT < SRR4302533.4268568/94‑1 (MQ=60)
TGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAT < SRR4302533.2251476/94‑1 (MQ=60)
GATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATT > SRR4302533.3459156/1‑94 (MQ=60)
GATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATT < SRR4302533.1522171/94‑1 (MQ=60)
ATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTT > SRR4302533.618742/1‑94 (MQ=60)
ATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTT < SRR4302533.88656/94‑1 (MQ=60)
TATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTT > SRR4302533.5042462/1‑94 (MQ=60)
TATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTT > SRR4302533.4167688/1‑94 (MQ=60)
TATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTT < SRR4302533.202883/94‑1 (MQ=60)
ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTG < SRR4302533.5910757/94‑1 (MQ=60)
ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTG < SRR4302533.3881930/94‑1 (MQ=60)
ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTG > SRR4302533.1201139/1‑94 (MQ=60)
ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTG < SRR4302533.5187525/94‑1 (MQ=60)
ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTG > SRR4302533.5672362/1‑94 (MQ=60)
ATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTC > SRR4302533.2017558/1‑94 (MQ=60)
TTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGC < SRR4302533.2309595/94‑1 (MQ=60)
TTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCC > SRR4302533.3025706/1‑94 (MQ=60)
TTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCC > SRR4302533.4128252/1‑94 (MQ=60)
TTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCC < SRR4302533.1899768/94‑1 (MQ=60)
TGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCG < SRR4302533.6019123/94‑1 (MQ=60)
TGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCG < SRR4302533.4071876/94‑1 (MQ=60)
TGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCG < SRR4302533.1938475/94‑1 (MQ=60)
TGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCG < SRR4302533.3734966/94‑1 (MQ=60)
CTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTT > SRR4302533.6086236/1‑94 (MQ=60)
CTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTT > SRR4302533.3812947/1‑94 (MQ=60)
CTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTT < SRR4302533.864636/94‑1 (MQ=60)
CTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTT > SRR4302533.175383/1‑94 (MQ=60)
TTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTG > SRR4302533.4893887/1‑94 (MQ=60)
TTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGG < SRR4302533.3512895/94‑1 (MQ=60)
ATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGNCA > SRR4302533.4322958/1‑94 (MQ=60)
CAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATT > SRR4302533.1585417/1‑94 (MQ=60)
CAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATT > SRR4302533.6123502/1‑94 (MQ=60)
CAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATT > SRR4302533.3640364/1‑94 (MQ=60)
AGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTA < SRR4302533.1409962/94‑1 (MQ=60)
AAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAAT < SRR4302533.542924/94‑1 (MQ=60)
AGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATA < SRR4302533.3901415/94‑1 (MQ=60)
AGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATA > SRR4302533.1722039/1‑94 (MQ=60)
AGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATA < SRR4302533.3071122/94‑1 (MQ=60)
AGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATA > SRR4302533.2490458/1‑94 (MQ=60)
GTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCGACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAA < SRR4302533.4339885/94‑1 (MQ=60)
GTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAA < SRR4302533.4964412/94‑1 (MQ=60)
TGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAAT < SRR4302533.3381166/94‑1 (MQ=60)
TGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAAT < SRR4302533.74351/94‑1 (MQ=60)
GGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAACCATCCATTTTGCCGTTGGCATTAATAATC < SRR4302533.6045507/94‑1 (MQ=60)
GGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATC < SRR4302533.4662171/94‑1 (MQ=60)
GGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGCACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATCATC > SRR4302533.6033121/1‑94 (MQ=60)
CACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGT > SRR4302533.77562/1‑94 (MQ=60)
ACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTG > SRR4302533.3443729/1‑94 (MQ=60)
CTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGT < SRR4302533.1562955/94‑1 (MQ=60)
CTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGT < SRR4302533.5081428/94‑1 (MQ=60)
CTGGCAGATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGT < SRR4302533.1258169/94‑1 (MQ=60)
TGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTC < SRR4302533.4919620/94‑1 (MQ=60)
ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT < SRR4302533.1643667/94‑1 (MQ=60)
ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT < SRR4302533.6165186/94‑1 (MQ=60)
ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT > SRR4302533.2680094/1‑94 (MQ=60)
ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT > SRR4302533.827828/1‑94 (MQ=60)
ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT < SRR4302533.3440005/94‑1 (MQ=60)
ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT > SRR4302533.4330265/1‑94 (MQ=60)
ATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACT > SRR4302533.5977991/1‑94 (MQ=60)
TATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCGACTG > SRR4302533.6033823/1‑94 (MQ=60)
TATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTG > SRR4302533.2495156/1‑94 (MQ=60)
TATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTAGCATTAATAATCGTGTCAACTG > SRR4302533.435313/1‑94 (MQ=60)
ATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGC > SRR4302533.1941370/1‑94 (MQ=60)
TATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCG < SRR4302533.4702057/94‑1 (MQ=60)
ATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGC > SRR4302533.4444664/1‑94 (MQ=60)
TTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCG < SRR4302533.2098855/94‑1 (MQ=60)
TGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGG < SRR4302533.5939201/94‑1 (MQ=60)
TGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGG > SRR4302533.1382527/1‑94 (MQ=60)
TGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGG < SRR4302533.5003524/94‑1 (MQ=60)
GTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATGAATAATCGTGTCAACTGCGCGGGAACCAG < SRR4302533.503516/94‑1 (MQ=60)
TGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGT > SRR4302533.2408035/1‑94 (MQ=60)
TGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGT < SRR4302533.3455974/94‑1 (MQ=60)
CAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGAC > SRR4302533.196408/1‑94 (MQ=60)
AGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACG > SRR4302533.1147492/1‑94 (MQ=60)
CTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTG < SRR4302533.2035723/94‑1 (MQ=60)
TATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGT < SRR4302533.6203948/94‑1 (MQ=60)
TATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGT < SRR4302533.2488932/94‑1 (MQ=60)
ATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTT < SRR4302533.6286525/94‑1 (MQ=60)
GAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAAT < SRR4302533.251595/94‑1 (MQ=60)
GTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGA < SRR4302533.5917472/94‑1 (MQ=60)
GTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGA < SRR4302533.75201/94‑1 (MQ=60)
ATACAGCGCCAACATCTTTTCCATAAACCTCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGA < SRR4302533.5236759/94‑1 (MQ=60)
TACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAG < SRR4302533.924427/94‑1 (MQ=60)
TACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAG < SRR4302533.5134372/94‑1 (MQ=60)
TACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAG < SRR4302533.4011613/94‑1 (MQ=60)
CAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCC > SRR4302533.3757762/1‑94 (MQ=60)
AGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCA < SRR4302533.774944/94‑1 (MQ=60)
AGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCA > SRR4302533.2176396/1‑94 (MQ=60)
AGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCA < SRR4302533.4092037/94‑1 (MQ=60)
CGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAGC > SRR4302533.3528635/1‑94 (MQ=60)
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ACCATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGTGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGCCAGC > NC_000913/2778819‑2779004
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
