Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,806,271 T→C intergenic (+126/‑1367) proX → / → b2682 high‑affinity transport system for glycine betaine and proline/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,806,2710TC100.0% 1265.8 / NA 383intergenic (+126/‑1367)proX/b2682high‑affinity transport system for glycine betaine and proline/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (175/208);  total (175/208)

Only 100 of 399 total aligned reads displayed.

CCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCATCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTT  >  NC_000913/2806181‑2806360
                                                                                          |                                                                                         
 cgccgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACCTTTCAACAATCTATCTTTCAcccc                                                                                        >  1:8637462/1‑93 (MQ=255)
  gccgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCa                                                                                       <  1:3234386/93‑1 (MQ=255)
   ccgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCat                                                                                      >  2:9528604/1‑93 (MQ=255)
    cgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCata                                                                                     <  1:6492988/93‑1 (MQ=255)
    cgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCata                                                                                     <  1:9933791/93‑1 (MQ=255)
    cgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCata                                                                                     >  1:2332861/1‑93 (MQ=255)
    cgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCata                                                                                     <  1:1809825/93‑1 (MQ=255)
     gTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCatat                                                                                    >  2:4197201/1‑93 (MQ=255)
     gTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCatat                                                                                    >  2:2899480/1‑93 (MQ=255)
     gTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCatat                                                                                    <  2:5190245/93‑1 (MQ=255)
     gTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCatat                                                                                    >  2:6327451/1‑93 (MQ=255)
     gTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCatat                                                                                    <  1:7104941/93‑1 (MQ=255)
      ttCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATAtt                                                                                   >  2:1749925/1‑93 (MQ=255)
      ttCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATAtt                                                                                   <  2:4328292/93‑1 (MQ=255)
       tCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATATATCTTTCACCCCATATtc                                                                                  <  1:1149794/93‑1 (MQ=255)
         tgtgCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATtcat                                                                                >  1:3016622/1‑93 (MQ=255)
           tgCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATtcatca                                                                              >  2:2190206/1‑93 (MQ=255)
               caATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACAt                                                                          <  2:9673752/93‑1 (MQ=255)
               caATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACAt                                                                          >  1:3184605/1‑93 (MQ=255)
                aaTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATc                                                                         <  1:2825479/93‑1 (MQ=255)
                aaTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATc                                                                         >  2:1163004/1‑93 (MQ=255)
                 aTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATcc                                                                        >  1:8037511/1‑93 (MQ=255)
                 aTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTCTCACCCCATATTCATCAACATcc                                                                        >  2:8762505/1‑93 (MQ=255)
                  tGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCg                                                                       >  2:5850257/1‑93 (MQ=255)
                   gCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGc                                                                      <  1:4263416/93‑1 (MQ=255)
                   gCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGc                                                                      >  1:6644513/1‑93 (MQ=255)
                      tGATGCGGCGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCtat                                                                   <  2:9391253/93‑1 (MQ=255)
                      tGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCtat                                                                   >  2:7510332/1‑93 (MQ=255)
                       gATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCtatt                                                                  >  1:7431173/1‑93 (MQ=255)
                         tGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCtattat                                                                >  2:809565/1‑93 (MQ=255)
                          gCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTattatt                                                               <  1:4891947/93‑1 (MQ=255)
                           cGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTg                                                              <  1:6349174/93‑1 (MQ=255)
                            ggcGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATACTCATCAACATTCGCTATTATTGa                                                             >  2:4913297/3‑93 (MQ=38)
                            gACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGa                                                             >  1:8379155/1‑93 (MQ=255)
                                cTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTc                                                         >  2:4503671/1‑93 (MQ=255)
                                cTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTc                                                         >  1:1500495/1‑93 (MQ=255)
                                cTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACACCATATTCATCAACATCCGCTATTATTGATTTc                                                         >  1:1057618/1‑93 (MQ=255)
                                 tGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTcc                                                        >  2:5426640/1‑93 (MQ=255)
                                   gcgcGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAg                                                      <  2:257586/93‑1 (MQ=255)
                                   gcgcGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAg                                                      <  2:5014675/93‑1 (MQ=255)
                                     gcgTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCt                                                    >  2:3479777/1‑93 (MQ=255)
                                      cgTCTTATCATGCCTACAAACCGCATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCACCATCCGCTATTATTGATTTCCAGCtt                                                   <  2:7295372/93‑1 (MQ=255)
                                      cgTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCtt                                                   >  1:7709337/1‑93 (MQ=255)
                                      cgTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCtt                                                   >  1:4454697/1‑93 (MQ=255)
                                      cgTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCtt                                                   <  2:2234501/93‑1 (MQ=255)
                                       gTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTa                                                  >  2:7649854/1‑93 (MQ=255)
                                        tCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTaa                                                 <  2:2751346/93‑1 (MQ=255)
                                        tCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTaa                                                 >  1:5919383/1‑93 (MQ=255)
                                         cTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAat                                                >  1:6937479/1‑93 (MQ=255)
                                          ttATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAatc                                               >  1:1668275/1‑93 (MQ=255)
                                          ttATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAatc                                               >  2:468157/1‑93 (MQ=255)
                                          ttATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAatc                                               >  1:3723454/1‑93 (MQ=255)
                                           tATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAatca                                              >  1:9244004/1‑93 (MQ=255)
                                            aTCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAatcat                                             <  1:5676900/93‑1 (MQ=255)
                                             tCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAatcatc                                            <  2:3037453/93‑1 (MQ=255)
                                             tCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAatcatc                                            >  2:8253379/1‑93 (MQ=255)
                                              cATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAAtcatca                                           <  1:5277677/93‑1 (MQ=255)
                                               aTGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCAc                                          <  1:5096469/93‑1 (MQ=255)
                                               aTGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCAc                                          >  1:7865971/1‑93 (MQ=255)
                                               aTGCCTACAAACCACATCGCACATTTCAACAATCGATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCAc                                          <  1:6216317/93‑1 (MQ=255)
                                                tGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCAcc                                         <  1:5547746/93‑1 (MQ=255)
                                                tGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCAcc                                         >  1:5840869/1‑93 (MQ=255)
                                                   cTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATAACCtga                                      >  1:2063945/1‑93 (MQ=255)
                                                    tACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtgat                                     >  2:1027900/1‑93 (MQ=255)
                                                    tACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtgat                                     >  1:9475559/1‑93 (MQ=255)
                                                    tACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtgat                                     <  1:354502/93‑1 (MQ=255)
                                                    tACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtgat                                     >  2:4029185/1‑93 (MQ=255)
                                                     aCAAACCATATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtgatg                                    <  2:6697925/93‑1 (MQ=255)
                                                       aaaCCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGaa                                  <  2:2159443/93‑1 (MQ=255)
                                                        aaCCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAAc                                 >  2:9105016/1‑93 (MQ=255)
                                                         aCCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACa                                <  2:1387770/93‑1 (MQ=255)
                                                          ccACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACaa                               <  2:3192704/93‑1 (MQ=255)
                                                          ccACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACaa                               <  1:9351410/93‑1 (MQ=255)
                                                           cacaTCTCACATTTCAACAATCTATCTTTCGCCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACaaa                              <  2:7950803/93‑1 (MQ=255)
                                                           cacaTCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACaaa                              >  1:6102926/1‑93 (MQ=255)
                                                           cacaTCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACaaa                              >  2:6776155/1‑93 (MQ=255)
                                                            acaTCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACaaaa                             >  1:1278834/1‑93 (MQ=255)
                                                               tCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAaata                          <  1:1414287/93‑1 (MQ=255)
                                                                cGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAaataa                         <  1:9326049/93‑1 (MQ=255)
                                                                  cacaTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATg                       <  2:6897583/93‑1 (MQ=255)
                                                                   acaTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGa                      <  1:10029958/93‑1 (MQ=255)
                                                                   acaTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGa                      >  1:3891201/1‑93 (MQ=255)
                                                                     aTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACt                    >  2:5620333/1‑93 (MQ=255)
                                                                      tttCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTa                   >  1:2000809/1‑93 (MQ=255)
                                                                       ttCAACAATCTATCTTTCACCCCATATTTATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTaa                  >  1:3381510/1‑93 (MQ=255)
                                                                       ttCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTaa                  >  2:3629578/1‑93 (MQ=255)
                                                                        tCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTaaa                 <  2:7698661/93‑1 (MQ=255)
                                                                        tCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTaaa                 >  2:1980506/1‑93 (MQ=255)
                                                                          aacaaTCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAAcc               <  2:8874638/93‑1 (MQ=255)
                                                                          aacaaTCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAAcc               >  1:8261721/1‑93 (MQ=255)
                                                                            caaTCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTa             >  2:1081917/1‑93 (MQ=255)
                                                                              atctatctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAAt           >  1:2230079/1‑93 (MQ=255)
                                                                                ctatctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCa         <  2:6725734/93‑1 (MQ=255)
                                                                                ctatctTTCACCCCATATTCACCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCa         <  1:9658367/93‑1 (MQ=255)
                                                                                  atctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATg       <  2:6390844/93‑1 (MQ=255)
                                                                                  atctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATg       <  1:4618653/93‑1 (MQ=255)
                                                                                   tctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGa      >  2:3703118/1‑93 (MQ=255)
                                                                                    ctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAg     <  2:6512961/93‑1 (MQ=255)
                                                                                      ttCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCt   >  1:9020473/1‑93 (MQ=255)
                                                                                       tCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCtt  <  2:6035145/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCATCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTT  >  NC_000913/2806181‑2806360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 212 total aligned reads displayed.
ATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCATCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTAGC  >  NC_000913/2806179‑2806363
                                                                                            |                                                                                            
ATCCGCCTTTGTGTTCACAATGACTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACC                                                                                             <  SRR4302540.7501872/94‑1 (MQ=60)
ATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACC                                                                                             >  SRR4302540.2852188/1‑94 (MQ=60)
ATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACC                                                                                             <  SRR4302540.2023829/94‑1 (MQ=60)
  CCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACCTTTCAACAATCTATCTTTCACCCC                                                                                           >  SRR4302540.8737798/1‑94 (MQ=60)
  CCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCC                                                                                           <  SRR4302540.2238919/94‑1 (MQ=60)
  CCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCC                                                                                           <  SRR4302540.5969732/94‑1 (MQ=60)
   CGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCA                                                                                          <  SRR4302540.9443317/94‑1 (MQ=60)
    GCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCAT                                                                                         <  SRR4302540.3269559/94‑1 (MQ=60)
    GCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCAT                                                                                         <  SRR4302540.3269563/94‑1 (MQ=60)
     CCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATA                                                                                        >  SRR4302540.2357998/1‑94 (MQ=60)
     CCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATA                                                                                        >  SRR4302540.130160/1‑94 (MQ=60)
      CGTTCTGTGCACAATTCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATAT                                                                                       <  SRR4302540.1829557/94‑1 (MQ=60)
      CGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATAT                                                                                       <  SRR4302540.10049723/94‑1 (MQ=60)
      CGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATAT                                                                                       >  SRR4302540.3021096/1‑94 (MQ=60)
      CGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATAT                                                                                       <  SRR4302540.1829558/94‑1 (MQ=60)
      CGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATAT                                                                                       <  SRR4302540.6565197/94‑1 (MQ=60)
       GTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATT                                                                                      <  SRR4302540.511305/94‑1 (MQ=60)
       GTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATT                                                                                      <  SRR4302540.5607047/94‑1 (MQ=60)
       GTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATT                                                                                      <  SRR4302540.7183991/94‑1 (MQ=60)
       GTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATT                                                                                      >  SRR4302540.392936/1‑94 (MQ=60)
       GTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATT                                                                                      <  SRR4302540.9252376/94‑1 (MQ=60)
        TTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTC                                                                                     >  SRR4302540.1047322/1‑94 (MQ=60)
        TTCTGCGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTC                                                                                     >  SRR4302540.1047323/1‑94 (MQ=60)
         TCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCA                                                                                    <  SRR4302540.4541729/94‑1 (MQ=60)
         TCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATATATCTTTCACCCCATATTCA                                                                                    <  SRR4302540.1161780/94‑1 (MQ=60)
          CTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCAT                                                                                   >  SRR4302540.3049782/1‑94 (MQ=60)
          CTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCAT                                                                                   >  SRR4302540.5187149/1‑94 (MQ=60)
          CTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCAT                                                                                   >  SRR4302540.3221180/1‑94 (MQ=60)
            GTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCA                                                                                 >  SRR4302540.6360677/1‑94 (MQ=60)
            GTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCA                                                                                 >  SRR4302540.6360678/1‑94 (MQ=60)
              GCACACTGCCTGATGCGGCGCTGGCGCGTCTTATCATGCCTACAACCCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAAC                                                                               <  SRR4302540.6151766/94‑1 (MQ=60)
              GCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAAC                                                                               <  SRR4302540.9517607/94‑1 (MQ=60)
              GCACAATGCCTGATGCGACGCTGGCGCCTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAAC                                                                               <  SRR4302540.978219/94‑1 (MQ=60)
               CACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACA                                                                              <  SRR4302540.6571057/94‑1 (MQ=60)
               CACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACA                                                                              <  SRR4302540.5339433/94‑1 (MQ=60)
                ACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACAT                                                                             >  SRR4302540.3219205/1‑94 (MQ=60)
                  AATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCC                                                                           <  SRR4302540.2856012/94‑1 (MQ=60)
                  AATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCC                                                                           >  SRR4302540.8130921/1‑94 (MQ=60)
                    TGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGC                                                                         >  SRR4302540.6718030/1‑94 (MQ=60)
                    TGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGC                                                                         <  SRR4302540.6507898/94‑1 (MQ=60)
                     GCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCT                                                                        <  SRR4302540.4309786/94‑1 (MQ=60)
                     GCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCT                                                                        <  SRR4302540.4309787/94‑1 (MQ=60)
                        TGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATT                                                                     >  SRR4302540.7513954/1‑94 (MQ=60)
                        TGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATT                                                                     <  SRR4302540.5091773/94‑1 (MQ=60)
                         GATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTA                                                                    >  SRR4302540.9166883/1‑94 (MQ=60)
                          ATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTAT                                                                   <  SRR4302540.4329061/94‑1 (MQ=60)
                           TGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATT                                                                  >  SRR4302540.3348759/1‑94 (MQ=60)
                            GCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTG                                                                 <  SRR4302540.9696353/94‑1 (MQ=60)
                            GCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTG                                                                 <  SRR4302540.1075439/94‑1 (MQ=60)
                            GCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTG                                                                 <  SRR4302540.4645737/94‑1 (MQ=60)
                            GCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTG                                                                 <  SRR4302540.8732075/94‑1 (MQ=60)
                            GCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTG                                                                 <  SRR4302540.4944553/94‑1 (MQ=60)
                            GCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTG                                                                 <  SRR4302540.8732074/94‑1 (MQ=60)
                             CGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGA                                                                <  SRR4302540.3446441/94‑1 (MQ=60)
                             CGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGA                                                                >  SRR4302540.8476386/1‑94 (MQ=60)
                             CGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGA                                                                <  SRR4302540.6419880/94‑1 (MQ=60)
                             CGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGA                                                                <  SRR4302540.6754575/94‑1 (MQ=60)
                              GACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGAT                                                               >  SRR4302540.1177978/1‑94 (MQ=60)
                              GACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGAT                                                               <  SRR4302540.5752024/94‑1 (MQ=60)
                               ACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATT                                                              <  SRR4302540.7146454/94‑1 (MQ=60)
                               ACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATT                                                              <  SRR4302540.7332288/94‑1 (MQ=60)
                               ACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATT                                                              >  SRR4302540.3363665/1‑94 (MQ=60)
                                CGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTT                                                             >  SRR4302540.4323458/1‑94 (MQ=60)
                                 GCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTC                                                            >  SRR4302540.1517030/1‑94 (MQ=60)
                                 GCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTC                                                            <  SRR4302540.5917099/94‑1 (MQ=60)
                                 GCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTC                                                            >  SRR4302540.1517031/1‑94 (MQ=60)
                                 GCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTC                                                            <  SRR4302540.6051602/94‑1 (MQ=60)
                                 GCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTC                                                            >  SRR4302540.9069665/1‑94 (MQ=60)
                                 GCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACACCATATTCATCAACATCCGCTATTATTGATTTC                                                            >  SRR4302540.1068383/1‑94 (MQ=60)
                                  CTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCC                                                           <  SRR4302540.8177968/94‑1 (MQ=60)
                                   TGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCA                                                          <  SRR4302540.2078797/94‑1 (MQ=60)
                                   TGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCA                                                          <  SRR4302540.4202469/94‑1 (MQ=60)
                                   TGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCA                                                          >  SRR4302540.581042/1‑94 (MQ=60)
                                   CGGCGCGTCTGATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCCTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCA                                                          <  SRR4302540.2047069/94‑1 (MQ=60)
                                      CGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCT                                                       >  SRR4302540.6179443/1‑94 (MQ=60)
                                       GCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTT                                                      >  SRR4302540.7797873/1‑94 (MQ=60)
                                       GCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTT                                                      >  SRR4302540.4502988/1‑94 (MQ=60)
                                        CGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTA                                                     >  SRR4302540.2304449/1‑94 (MQ=60)
                                         GTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAA                                                    >  SRR4302540.3016481/1‑94 (MQ=60)
                                          TCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAAT                                                   >  SRR4302540.7014695/1‑94 (MQ=60)
                                          TCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAAT                                                   <  SRR4302540.2251393/94‑1 (MQ=60)
                                          TCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAAT                                                   <  SRR4302540.3146536/94‑1 (MQ=60)
                                          TCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAAT                                                   <  SRR4302540.2019118/94‑1 (MQ=60)
                                          TCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAAT                                                   <  SRR4302540.6549283/94‑1 (MQ=60)
                                          TCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAAT                                                   >  SRR4302540.5890049/1‑94 (MQ=60)
                                           CTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATC                                                  <  SRR4302540.3689066/94‑1 (MQ=60)
                                           CTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATC                                                  >  SRR4302540.1686430/1‑94 (MQ=60)
                                           CTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATC                                                  >  SRR4302540.9627397/1‑94 (MQ=60)
                                           CTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATC                                                  <  SRR4302540.3453403/94‑1 (MQ=60)
                                           CTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATC                                                  <  SRR4302540.7893026/94‑1 (MQ=60)
                                           CTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATC                                                  >  SRR4302540.3764074/1‑94 (MQ=60)
                                            TTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCA                                                 <  SRR4302540.8809573/94‑1 (MQ=60)
                                            TTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCA                                                 >  SRR4302540.5963207/1‑94 (MQ=60)
                                            TTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCA                                                 >  SRR4302540.9354703/1‑94 (MQ=60)
                                              TTCATGCCTACAAACCACATCGCACATGTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATC                                               <  SRR4302540.5739408/94‑1 (MQ=60)
                                              ATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATC                                               <  SRR4302540.5739409/94‑1 (MQ=60)
                                               TCATGCCTACACACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCA                                              <  SRR4302540.9411620/94‑1 (MQ=60)
                                               TCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCA                                              <  SRR4302540.9411619/94‑1 (MQ=60)
                                               TCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCA                                              <  SRR4302540.8083980/94‑1 (MQ=60)
                                                CATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCAC                                             >  SRR4302540.7957866/1‑94 (MQ=60)
                                                CATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCAC                                             <  SRR4302540.5335308/94‑1 (MQ=60)
                                                CATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCAC                                             >  SRR4302540.1278052/1‑94 (MQ=60)
                                                 ATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACC                                            >  SRR4302540.5905459/1‑94 (MQ=60)
                                                 ATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACC                                            <  SRR4302540.6179522/94‑1 (MQ=60)
                                                 ATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACC                                            <  SRR4302540.5151616/94‑1 (MQ=60)
                                                 ATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACC                                            >  SRR4302540.7228769/1‑94 (MQ=60)
                                                 ATGCCTACAAACCACATCGCACATTTCAACAATCGATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACC                                            <  SRR4302540.6285481/94‑1 (MQ=60)
                                                  TGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCT                                           <  SRR4302540.5608864/94‑1 (MQ=60)
                                                  TGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCT                                           <  SRR4302540.7906091/94‑1 (MQ=60)
                                                   GCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTG                                          <  SRR4302540.679373/94‑1 (MQ=60)
                                                   GCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTG                                          >  SRR4302540.338021/1‑94 (MQ=60)
                                                    CCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATAACCTGA                                         >  SRR4302540.2086154/1‑94 (MQ=60)
                                                     CTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGAT                                        >  SRR4302540.2260834/1‑94 (MQ=60)
                                                     CTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGAT                                        >  SRR4302540.9587935/1‑94 (MQ=60)
                                                     CTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGAT                                        >  SRR4302540.8100151/1‑94 (MQ=60)
                                                     CTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGAT                                        <  SRR4302540.9375662/94‑1 (MQ=60)
                                                     CTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGAT                                        >  SRR4302540.836349/1‑94 (MQ=60)
                                                     CTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGAT                                        <  SRR4302540.1141761/94‑1 (MQ=60)
                                                     CTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGAT                                        >  SRR4302540.2375458/1‑94 (MQ=60)
                                                      TACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATG                                       <  SRR4302540.358139/94‑1 (MQ=60)
                                                       ACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGA                                      <  SRR4302540.2822799/94‑1 (MQ=60)
                                                        CAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAA                                     >  SRR4302540.691239/1‑94 (MQ=60)
                                                         AAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAAC                                    >  SRR4302540.1547238/1‑94 (MQ=60)
                                                           ACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAA                                  >  SRR4302540.8148880/1‑94 (MQ=60)
                                                            CCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAA                                 >  SRR4302540.6170884/1‑94 (MQ=60)
                                                            CCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAA                                 <  SRR4302540.9462789/94‑1 (MQ=60)
                                                            CCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAA                                 <  SRR4302540.9462788/94‑1 (MQ=60)
                                                            CCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAA                                 >  SRR4302540.4038248/1‑94 (MQ=60)
                                                             CACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAA                                >  SRR4302540.1292015/1‑94 (MQ=60)
                                                              ACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAA                               <  SRR4302540.7145882/94‑1 (MQ=60)
                                                              ACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAA                               <  SRR4302540.9865858/94‑1 (MQ=60)
                                                              ACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAA                               <  SRR4302540.6051953/94‑1 (MQ=60)
                                                                ATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATA                             >  SRR4302540.2004732/1‑94 (MQ=60)
                                                                 TCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAA                            >  SRR4302540.3257911/1‑94 (MQ=60)
                                                                 TCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAA                            <  SRR4302540.1442217/94‑1 (MQ=60)
                                                                 ACGCACATTTCAACAATCGAGCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAA                            <  SRR4302540.1442216/94‑1 (MQ=60)
                                                                  CGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAGCATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAAT                           <  SRR4302540.4673888/94‑1 (MQ=60)
                                                                  CGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAAT                           <  SRR4302540.6427250/94‑1 (MQ=60)
                                                                  CGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAAT                           <  SRR4302540.4687404/94‑1 (MQ=60)
                                                                  CGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAAT                           >  SRR4302540.9493957/1‑94 (MQ=60)
                                                                  CGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAAT                           >  SRR4302540.9505554/1‑94 (MQ=60)
                                                                  CGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAAT                           <  SRR4302540.5624680/94‑1 (MQ=60)
                                                                  CGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAAT                           <  SRR4302540.5624681/94‑1 (MQ=60)
                                                                   GCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATG                          <  SRR4302540.1126160/94‑1 (MQ=60)
                                                                    CACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGA                         >  SRR4302540.6648458/1‑94 (MQ=60)
                                                                    CACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGA                         >  SRR4302540.3933450/1‑94 (MQ=60)
                                                                     ACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGAC                        <  SRR4302540.9727523/94‑1 (MQ=60)
                                                                     ACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGAC                        >  SRR4302540.147785/1‑94 (MQ=60)
                                                                     ACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGAC                        <  SRR4302540.1629965/94‑1 (MQ=60)
                                                                     ACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGAC                        <  SRR4302540.10146637/94‑1 (MQ=60)
                                                                     ACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGAC                        <  SRR4302540.9136664/94‑1 (MQ=60)
                                                                     ACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGAC                        >  SRR4302540.6344919/1‑94 (MQ=60)
                                                                     ACATTTCAACAATCTATCTTTCACCCCAAATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGAC                        <  SRR4302540.46199/94‑1 (MQ=60)
                                                                       ATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTA                      >  SRR4302540.2022476/1‑94 (MQ=60)
                                                                        TTTCAACAATCTATCTTTCACCCCATATTTATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAA                     >  SRR4302540.3418424/1‑94 (MQ=60)
                                                                        TTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAA                     >  SRR4302540.1424712/1‑94 (MQ=60)
                                                                        TTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAA                     <  SRR4302540.2579400/94‑1 (MQ=60)
                                                                         TTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAA                    <  SRR4302540.2152792/94‑1 (MQ=60)
                                                                          TCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAAC                   >  SRR4302540.3086783/1‑94 (MQ=60)
                                                                           CAACAATCTATCTTTCACCCCATATTCCTCAACATCCGCTATTATTGATTACCAGCTTAAACATCACGTGACGAACAACAATAATGACGACACC                  >  SRR4302540.3751872/1‑94 (MQ=60)
                                                                           CAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACC                  <  SRR4302540.9440000/94‑1 (MQ=60)
                                                                           CAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACC                  <  SRR4302540.1925584/94‑1 (MQ=60)
                                                                           CAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACC                  >  SRR4302540.8017496/1‑94 (MQ=60)
                                                                           CAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACC                  >  SRR4302540.8357725/1‑94 (MQ=60)
                                                                            AACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCT                 <  SRR4302540.7727384/94‑1 (MQ=60)
                                                                             ACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACGTA                >  SRR4302540.2333674/1‑94 (MQ=60)
                                                                             ACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTA                >  SRR4302540.8315198/1‑94 (MQ=60)
                                                                              CAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAA               <  SRR4302540.3621618/94‑1 (MQ=60)
                                                                              CAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAA               >  SRR4302540.1203802/1‑94 (MQ=60)
                                                                               AATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAAT              >  SRR4302540.4798245/1‑94 (MQ=60)
                                                                               AATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAAT              >  SRR4302540.2254101/1‑94 (MQ=60)
                                                                                ATCTATCTTTCGCCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATC             <  SRR4302540.141051/94‑1 (MQ=60)
                                                                                ATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATC             >  SRR4302540.8606560/1‑94 (MQ=60)
                                                                                ATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATC             <  SRR4302540.3745726/94‑1 (MQ=60)
                                                                                ATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATC             <  SRR4302540.5071707/94‑1 (MQ=60)
                                                                                ATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATC             <  SRR4302540.1804356/94‑1 (MQ=60)
                                                                                 TCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCA            >  SRR4302540.879759/1‑94 (MQ=60)
                                                                                  CTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCAT           <  SRR4302540.7889578/94‑1 (MQ=60)
                                                                                  CTATCTTTCACCCCATATTCACCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCAT           <  SRR4302540.9772063/94‑1 (MQ=60)
                                                                                   TATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATG          <  SRR4302540.8369504/94‑1 (MQ=60)
                                                                                    ATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGA         <  SRR4302540.5162131/94‑1 (MQ=60)
                                                                                    ATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGA         <  SRR4302540.4668177/94‑1 (MQ=60)
                                                                                     TCTTTCCCCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAG        <  SRR4302540.7193886/94‑1 (MQ=60)
                                                                                     TCTTTCACCCCATATGCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAG        <  SRR4302540.3919335/94‑1 (MQ=60)
                                                                                       TTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCT      <  SRR4302540.7175822/94‑1 (MQ=60)
                                                                                       TTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCT      >  SRR4302540.9128713/1‑94 (MQ=60)
                                                                                       TTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCT      >  SRR4302540.1704025/1‑94 (MQ=60)
                                                                                        TTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTT     <  SRR4302540.3140595/94‑1 (MQ=60)
                                                                                        TTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTT     >  SRR4302540.3918641/1‑94 (MQ=60)
                                                                                        TTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTT     <  SRR4302540.6185349/94‑1 (MQ=60)
                                                                                         TCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTA    <  SRR4302540.7783715/94‑1 (MQ=60)
                                                                                         TCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTA    <  SRR4302540.5493182/94‑1 (MQ=60)
                                                                                         TCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTA    <  SRR4302540.10099290/94‑1 (MQ=60)
                                                                                          CACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTAG   <  SRR4302540.4878740/94‑1 (MQ=60)
                                                                                          CACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTAG   >  SRR4302540.7059020/1‑94 (MQ=60)
                                                                                          CACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTAG   <  SRR4302540.968288/94‑1 (MQ=60)
                                                                                          CACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTAG   <  SRR4302540.5554098/94‑1 (MQ=60)
                                                                                          CACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTAG   >  SRR4302540.4103108/1‑94 (MQ=60)
                                                                                           ACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTAGC  >  SRR4302540.9139379/1‑94 (MQ=60)
                                                                                           ACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTAGC  <  SRR4302540.9865393/94‑1 (MQ=60)
                                                                                            |                                                                                            
ATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCATCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTTAGC  >  NC_000913/2806179‑2806363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑