Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,824,797 T→C F128S (TTT→TCT)  srlE → PTS system glucitol/sorbitol‑specific enzyme IIBC component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,824,7970TC100.0% 986.9 / NA 305F128S (TTT→TCT) srlEPTS system glucitol/sorbitol‑specific enzyme IIBC component
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (155/150);  total (155/150)

Only 100 of 310 total aligned reads displayed.

GCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTTTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCA  >  NC_000913/2824708‑2824886
                                                                                         |                                                                                         
gCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTc                                                                                        <  2:6999327/93‑1 (MQ=255)
 cTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTcc                                                                                       <  2:8937729/93‑1 (MQ=255)
 cTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTcc                                                                                       >  2:4432125/1‑93 (MQ=255)
 cTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTcc                                                                                       <  2:4901254/93‑1 (MQ=255)
  tGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCg                                                                                      <  1:7322893/93‑1 (MQ=255)
   ggCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGt                                                                                     <  2:2108968/93‑1 (MQ=255)
      gcAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTggg                                                                                  >  1:6089523/1‑93 (MQ=255)
      gcAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTggg                                                                                  >  2:8551015/1‑93 (MQ=255)
         gTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCg                                                                               >  1:9663841/1‑93 (MQ=255)
         gTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCg                                                                               >  1:7747119/1‑93 (MQ=255)
          tACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGt                                                                              >  2:1303778/1‑93 (MQ=255)
          tACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGt                                                                              >  2:5679579/1‑93 (MQ=255)
          tACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGACGt                                                                              >  1:4581490/1‑93 (MQ=255)
            cATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGa                                                                            >  2:3831945/1‑93 (MQ=255)
            cATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGa                                                                            <  2:3674480/93‑1 (MQ=255)
            cATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGa                                                                            >  2:7373989/1‑93 (MQ=255)
            cATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGa                                                                            <  1:234973/93‑1 (MQ=255)
             aTTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGAc                                                                           <  2:5063543/93‑1 (MQ=255)
               tgtgGAAGATATTTATGTCTCTGGCGTAAAAGAATAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTa                                                                         <  1:2180532/93‑1 (MQ=255)
               tgtgGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTa                                                                         <  2:3137555/93‑1 (MQ=255)
                gtgGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGTCGTGACTAt                                                                        <  2:6730121/93‑1 (MQ=255)
                gtgGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTAt                                                                        <  1:9965505/93‑1 (MQ=255)
                gtgGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTAt                                                                        <  1:6649450/93‑1 (MQ=255)
                  ggAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGTGACACCACAACCCTCTTCCGTGGGCCGTGACTATGa                                                                      <  1:2424238/93‑1 (MQ=255)
                  ggAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGa                                                                      >  2:2265738/1‑93 (MQ=255)
                  ggAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGa                                                                      <  2:4252637/93‑1 (MQ=255)
                   gAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGac                                                                     <  1:8732492/93‑1 (MQ=255)
                   gAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGac                                                                     <  1:4025431/93‑1 (MQ=255)
                   gAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGac                                                                     >  1:4214728/1‑93 (MQ=255)
                    aaGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGaca                                                                    >  2:6283730/1‑93 (MQ=255)
                     aGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGacac                                                                   >  2:4408397/1‑93 (MQ=255)
                     aGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGacac                                                                   >  1:6865129/1‑93 (MQ=255)
                     aGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGacac                                                                   >  2:4084745/1‑93 (MQ=255)
                        tatTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAg                                                                >  1:1890061/1‑93 (MQ=255)
                        tatTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAg                                                                >  1:7352755/1‑93 (MQ=255)
                        tatTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAg                                                                >  2:4534869/1‑93 (MQ=255)
                         atTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGt                                                               <  1:9524912/93‑1 (MQ=255)
                           ttATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTaa                                                             >  2:5348521/1‑93 (MQ=255)
                           ttATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGAGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTaa                                                             >  1:8919692/1‑93 (MQ=255)
                             aTGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGa                                                           >  1:6956159/1‑93 (MQ=255)
                              tGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGaa                                                          >  1:854780/1‑93 (MQ=255)
                               gTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTCTGACACCAGTAAGaaa                                                         >  2:2489496/1‑93 (MQ=255)
                                tctcTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGaaaa                                                        >  2:7141714/1‑93 (MQ=255)
                                  tctGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACAAGTAAGAAAATc                                                      >  2:6859487/1‑93 (MQ=255)
                                    tGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCAc                                                    <  2:9735777/93‑1 (MQ=255)
                                      gCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCg                                                  >  2:8721119/1‑93 (MQ=255)
                                        gTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGaa                                                <  2:5927196/93‑1 (MQ=255)
                                        gTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGaa                                                >  1:7235963/1‑93 (MQ=255)
                                        gTAAAAGAAGAAAACATCACTGTAGGAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGaa                                                >  2:3186600/1‑93 (MQ=255)
                                         tAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAAc                                               <  1:1405722/93‑1 (MQ=255)
                                         tAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAAc                                               >  1:3838880/1‑93 (MQ=255)
                                         tAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAAc                                               >  1:6185047/1‑93 (MQ=255)
                                          aaaaGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACa                                              >  1:1988177/1‑93 (MQ=255)
                                           aaaGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACaa                                             >  1:8039932/1‑93 (MQ=255)
                                           aaaGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACaa                                             <  2:9075696/93‑1 (MQ=255)
                                           aaaGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACaa                                             >  1:1532027/1‑93 (MQ=255)
                                            aagaagAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACaaa                                            <  2:9494059/93‑1 (MQ=255)
                                            aagaagAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACaaa                                            >  1:9193540/1‑93 (MQ=255)
                                            aagaagAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACaaa                                            <  2:2982559/93‑1 (MQ=255)
                                             agaagaAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAg                                           <  1:6387366/93‑1 (MQ=255)
                                             agaagaAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAg                                           >  2:3222950/1‑93 (MQ=255)
                                               aagaaAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCg                                         >  2:773389/1‑93 (MQ=255)
                                                agaaAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGTGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGa                                        <  1:5849764/93‑1 (MQ=255)
                                                agaaAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGa                                        <  2:7568910/93‑1 (MQ=255)
                                                agaaAAAATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGa                                        >  1:7092801/1‑93 (MQ=255)
                                                 aaaaaCATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATTACACCAGTAAGAAAATCACCGAACAAAGCGAt                                       <  2:8447823/92‑1 (MQ=255)
                                                   aaaCATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATgg                                     <  2:2054848/93‑1 (MQ=255)
                                                    aaCATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGt                                    <  2:5568600/93‑1 (MQ=255)
                                                    aaCATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGt                                    >  1:3921947/1‑93 (MQ=255)
                                                     aCATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGCCTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGtt                                   >  1:5118021/1‑93 (MQ=255)
                                                     aCATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGtt                                   <  1:2813847/93‑1 (MQ=255)
                                                        tCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTAc                                <  1:936304/93‑1 (MQ=255)
                                                         cACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACt                               <  2:2322881/93‑1 (MQ=255)
                                                         cACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACt                               <  2:1776835/93‑1 (MQ=255)
                                                           cTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCTAACAAAGCGATGGTTTACTgg                             <  1:5438087/93‑1 (MQ=255)
                                                            tGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGc                            >  1:2231497/1‑93 (MQ=255)
                                                            tGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGc                            >  1:3545673/1‑93 (MQ=255)
                                                             gtagtaGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCg                           >  2:1937519/1‑93 (MQ=255)
                                                              tagtagGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGa                          <  1:5711766/93‑1 (MQ=255)
                                                              tagtagGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGa                          >  1:3210515/1‑93 (MQ=255)
                                                                gtagGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAg                        <  2:8088339/93‑1 (MQ=255)
                                                                  agGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGt                      <  2:6653976/93‑1 (MQ=255)
                                                                   ggTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTg                     <  1:3446859/93‑1 (MQ=255)
                                                                    gTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTgg                    >  1:3273379/1‑93 (MQ=255)
                                                                       aTGCTACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGaa                 <  1:3083938/93‑1 (MQ=255)
                                                                       aTGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGaa                 <  2:7982411/93‑1 (MQ=255)
                                                                       aTGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGaa                 <  2:2397019/93‑1 (MQ=255)
                                                                        tGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAAt                >  1:7583144/1‑93 (MQ=255)
                                                                          cGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATgg              <  1:48389/93‑1 (MQ=255)
                                                                              accacAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCAt          >  2:979833/1‑93 (MQ=255)
                                                                              accacAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGCGGGAATGGGCAt          >  1:1025735/1‑93 (MQ=255)
                                                                               ccacAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATg         >  1:3680024/1‑93 (MQ=255)
                                                                               ccacAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATg         <  2:3754488/93‑1 (MQ=255)
                                                                               ccacAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATg         <  2:1137425/93‑1 (MQ=255)
                                                                                 acaACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTTGCGAAGGTGGGAATGGGCATggg       >  2:5494406/1‑93 (MQ=255)
                                                                                 acaACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATggg       <  2:6177642/93‑1 (MQ=255)
                                                                                 acaACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATggg       >  2:1433415/1‑93 (MQ=255)
                                                                                  caACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATgggg      >  1:9017921/1‑93 (MQ=255)
                                                                                     cccTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTcc   <  1:8163763/93‑1 (MQ=255)
                                                                                      ccTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCa  <  2:4193881/93‑1 (MQ=255)
                                                                                         |                                                                                         
GCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTTTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCA  >  NC_000913/2824708‑2824886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCCGCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTTTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCACCGT  >  NC_000913/2824705‑2824890
                                                                                            |                                                                                             
TCCGCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCT                                                                                              <  SRR4302540.8990741/94‑1 (MQ=60)
TCCGCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCT                                                                                              <  SRR4302540.1147847/94‑1 (MQ=60)
TCCGCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCT                                                                                              >  SRR4302540.5434025/1‑94 (MQ=60)
 CCGCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTT                                                                                             <  SRR4302540.3142840/94‑1 (MQ=60)
 CCGCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTT                                                                                             <  SRR4302540.6594167/94‑1 (MQ=60)
   GCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCC                                                                                           <  SRR4302540.3561463/94‑1 (MQ=60)
    CTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCG                                                                                          >  SRR4302540.5848996/1‑94 (MQ=60)
     TGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGT                                                                                         <  SRR4302540.7404678/94‑1 (MQ=60)
     TGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGT                                                                                         >  SRR4302540.1405914/1‑94 (MQ=60)
       GCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGG                                                                                       >  SRR4302540.328388/1‑94 (MQ=60)
        CGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGG                                                                                      >  SRR4302540.6157294/1‑94 (MQ=60)
        CGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGG                                                                                      <  SRR4302540.5899658/94‑1 (MQ=60)
        CGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGG                                                                                      <  SRR4302540.8657476/94‑1 (MQ=60)
          CAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCC                                                                                    >  SRR4302540.6438892/1‑94 (MQ=60)
          CAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCC                                                                                    >  SRR4302540.3672849/1‑94 (MQ=60)
           AGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCG                                                                                   >  SRR4302540.9777585/1‑94 (MQ=60)
           AGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCG                                                                                   >  SRR4302540.8529547/1‑94 (MQ=60)
           AGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCG                                                                                   >  SRR4302540.7837575/1‑94 (MQ=60)
            GTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGT                                                                                  >  SRR4302540.9611941/1‑94 (MQ=60)
            GTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGG                                                                                  >  SRR4302540.342238/1‑94 (MQ=60)
            GTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGACGT                                                                                  >  SRR4302540.4630879/1‑94 (MQ=60)
              ACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGA                                                                                >  SRR4302540.9686759/1‑94 (MQ=60)
              ACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGA                                                                                >  SRR4302540.7154924/1‑94 (MQ=60)
               CATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGAC                                                                               >  SRR4302540.465365/1‑94 (MQ=60)
               CATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGAC                                                                               <  SRR4302540.8425083/94‑1 (MQ=60)
               CATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGAC                                                                               <  SRR4302540.2863139/94‑1 (MQ=60)
               CATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGAC                                                                               <  SRR4302540.237249/94‑1 (MQ=60)
                 TTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTA                                                                             >  SRR4302540.4659866/1‑94 (MQ=60)
                 TTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTA                                                                             <  SRR4302540.8439784/94‑1 (MQ=60)
                  TGTGGAAGATATTTATGTCTCTGGCGTAAAAGAATAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTAT                                                                            <  SRR4302540.2204050/94‑1 (MQ=60)
                  TGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTAT                                                                            <  SRR4302540.2204051/94‑1 (MQ=60)
                  TGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTAT                                                                            <  SRR4302540.5947696/94‑1 (MQ=60)
                   GTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATG                                                                           <  SRR4302540.6997859/94‑1 (MQ=60)
                   GTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATG                                                                           <  SRR4302540.10081772/94‑1 (MQ=60)
                   GTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATG                                                                           <  SRR4302540.6723007/94‑1 (MQ=60)
                   GTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATG                                                                           >  SRR4302540.5648770/1‑94 (MQ=60)
                   GTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATG                                                                           <  SRR4302540.878772/94‑1 (MQ=60)
                     GGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGTGACACCACAACCCTCTTCCGTGGGCCGTGACTATGAC                                                                         <  SRR4302540.2450356/94‑1 (MQ=60)
                     GGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGAC                                                                         >  SRR4302540.4260619/1‑94 (MQ=60)
                     GGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGAC                                                                         <  SRR4302540.2019830/94‑1 (MQ=60)
                      GAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACA                                                                        <  SRR4302540.8833900/94‑1 (MQ=60)
                      GAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACA                                                                        <  SRR4302540.4068834/94‑1 (MQ=60)
                      GAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACA                                                                        <  SRR4302540.7364754/94‑1 (MQ=60)
                      GAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACA                                                                        <  SRR4302540.7364755/94‑1 (MQ=60)
                      GAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACA                                                                        >  SRR4302540.6509288/1‑94 (MQ=60)
                       AAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACAC                                                                       >  SRR4302540.6941215/1‑94 (MQ=60)
                        AGATATGTATGTATCTGGTGTAAAAGTAGAAAATATCATTGTAGTAGGTGATGCGACACCACAACCCTCTTCGGTGGGCCGTGACTATGACACC                                                                      <  SRR4302540.5174964/94‑1 (MQ=60)
                         GATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCA                                                                     <  SRR4302540.9754852/94‑1 (MQ=60)
                          ATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAG                                                                    >  SRR4302540.1910752/1‑94 (MQ=60)
                          ATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAG                                                                    >  SRR4302540.7434766/1‑94 (MQ=60)
                           TATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGT                                                                   <  SRR4302540.2835020/94‑1 (MQ=60)
                           TATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGT                                                                   <  SRR4302540.2441862/94‑1 (MQ=60)
                            ATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTA                                                                  >  SRR4302540.2975711/1‑94 (MQ=60)
                            ATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTA                                                                  >  SRR4302540.933410/1‑94 (MQ=60)
                            ATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTA                                                                  <  SRR4302540.9637693/94‑1 (MQ=60)
                            ATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTA                                                                  >  SRR4302540.6733878/1‑94 (MQ=60)
                            ATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTA                                                                  >  SRR4302540.7961579/1‑94 (MQ=60)
                             TTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAA                                                                 >  SRR4302540.9023001/1‑94 (MQ=60)
                             TTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGAGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAA                                                                 >  SRR4302540.9022999/1‑94 (MQ=60)
                             TTTATGTCTCTGGCGTAAAAGAACAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACCCCAGTAA                                                                 <  SRR4302540.1993199/94‑1 (MQ=60)
                              TTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAG                                                                >  SRR4302540.514110/1‑94 (MQ=60)
                              TTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAG                                                                >  SRR4302540.3923142/1‑94 (MQ=60)
                               TATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGA                                                               >  SRR4302540.7033551/1‑94 (MQ=60)
                               TATGTCTCTGGCATAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGA                                                               <  SRR4302540.8219194/94‑1 (MQ=60)
                                ATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAA                                                              <  SRR4302540.9609442/94‑1 (MQ=60)
                                ATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAA                                                              >  SRR4302540.2222379/1‑94 (MQ=60)
                                ATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAA                                                              >  SRR4302540.3394053/1‑94 (MQ=60)
                                ATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAA                                                              >  SRR4302540.9103479/1‑94 (MQ=60)
                                ATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAA                                                              >  SRR4302540.863856/1‑94 (MQ=60)
                                 TGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAA                                                             >  SRR4302540.7839078/1‑94 (MQ=60)
                                   TCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAAT                                                           >  SRR4302540.2081390/1‑94 (MQ=60)
                                   TCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAAT                                                           >  SRR4302540.7285244/1‑94 (MQ=60)
                                    CTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATC                                                          >  SRR4302540.53818/1‑94 (MQ=60)
                                    CTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATC                                                          <  SRR4302540.3816329/94‑1 (MQ=60)
                                     TCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCA                                                         >  SRR4302540.6754255/1‑94 (MQ=60)
                                       TGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACC                                                       <  SRR4302540.7416532/94‑1 (MQ=60)
                                       TGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACC                                                       <  SRR4302540.4130680/94‑1 (MQ=60)
                                        GGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCG                                                      <  SRR4302540.5703392/94‑1 (MQ=60)
                                          GGTAAAAGAAGAAAACATCGCTGAAGGAGGTGATGCTACACCACAGCCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAA                                                    <  SRR4302540.506205/94‑1 (MQ=60)
                                          CGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAA                                                    >  SRR4302540.7316677/1‑94 (MQ=60)
                                          CGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAA                                                    >  SRR4302540.2393516/1‑94 (MQ=60)
                                           GTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAAC                                                   >  SRR4302540.3880632/1‑94 (MQ=60)
                                           GTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAAC                                                   >  SRR4302540.6253929/1‑94 (MQ=60)
                                            TAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACA                                                  <  SRR4302540.1431709/94‑1 (MQ=60)
                                            TAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACA                                                  <  SRR4302540.1420859/94‑1 (MQ=60)
                                            TAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACA                                                  >  SRR4302540.2009723/1‑94 (MQ=60)
                                            TAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACA                                                  <  SRR4302540.3564167/94‑1 (MQ=60)
                                             AAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAA                                                 <  SRR4302540.742669/94‑1 (MQ=60)
                                             AAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAA                                                 >  SRR4302540.1548991/1‑94 (MQ=60)
                                             AAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAA                                                 >  SRR4302540.8133360/1‑94 (MQ=60)
                                             AAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAA                                                 >  SRR4302540.3888445/1‑94 (MQ=60)
                                             AAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAA                                                 >  SRR4302540.2268244/1‑94 (MQ=60)
                                              AAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAA                                                >  SRR4302540.261488/1‑94 (MQ=60)
                                              AAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAA                                                >  SRR4302540.9303804/1‑94 (MQ=60)
                                                AGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGC                                              <  SRR4302540.6458473/94‑1 (MQ=60)
                                                  AAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGA                                            >  SRR4302540.7276430/1‑94 (MQ=60)
                                                  AAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGA                                            >  SRR4302540.7547933/1‑94 (MQ=60)
                                                  AAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGA                                            >  SRR4302540.6172212/1‑94 (MQ=60)
                                                  AAGAAAAAATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGA                                            >  SRR4302540.7171730/1‑94 (MQ=60)
                                                   AGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGTGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGAT                                           <  SRR4302540.5914462/94‑1 (MQ=60)
                                                    GAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATG                                          >  SRR4302540.6360126/1‑94 (MQ=60)
                                                     AAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGG                                         >  SRR4302540.8221139/1‑94 (MQ=60)
                                                      AAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGT                                        >  SRR4302540.5250627/1‑94 (MQ=60)
                                                      AAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGT                                        <  SRR4302540.4107196/94‑1 (MQ=60)
                                                      AAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGT                                        >  SRR4302540.3964392/1‑94 (MQ=60)
                                                       AACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGCCTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTT                                       >  SRR4302540.5173432/1‑94 (MQ=60)
                                                       AACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTT                                       >  SRR4302540.9004692/1‑94 (MQ=60)
                                                        ACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACTAGTAAGAAAATCACCGAACAAAGCGATGGTTT                                      <  SRR4302540.9969213/94‑1 (MQ=60)
                                                        ACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTT                                      <  SRR4302540.2844241/94‑1 (MQ=60)
                                                         CATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTA                                     >  SRR4302540.4626049/1‑94 (MQ=60)
                                                           TCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACT                                   <  SRR4302540.3132433/94‑1 (MQ=60)
                                                           TCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACT                                   <  SRR4302540.946115/94‑1 (MQ=60)
                                                            CACTGGAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTG                                  <  SRR4302540.3463366/94‑1 (MQ=60)
                                                             ACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGG                                 >  SRR4302540.6762425/1‑94 (MQ=60)
                                                             ACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGG                                 <  SRR4302540.779441/94‑1 (MQ=60)
                                                              actttGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCTAACAAAGCGATGGTTTACTGGC                                <  SRR4302540.5497910/89‑1 (MQ=60)
                                                              CTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCTAACAAAGCGATGGTTTACTGGC                                <  SRR4302540.5497908/94‑1 (MQ=60)
                                                              CTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGC                                <  SRR4302540.2313632/94‑1 (MQ=60)
                                                              CTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGC                                >  SRR4302540.2255523/1‑94 (MQ=60)
                                                              CTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGC                                >  SRR4302540.3584396/1‑94 (MQ=60)
                                                               cgtactacgcGATGCGACACCACAACCCTCTTCCGTGGGCCGTCACTATGACCCCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCG                               <  SRR4302540.2767978/84‑1 (MQ=60)
                                                               TGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCG                               <  SRR4302540.615624/94‑1 (MQ=60)
                                                                GTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGA                              >  SRR4302540.3245366/1‑94 (MQ=60)
                                                                 TAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAA                             <  SRR4302540.5774644/94‑1 (MQ=60)
                                                                 TAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAA                             <  SRR4302540.183290/94‑1 (MQ=60)
                                                                   GTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGG                           >  SRR4302540.4529815/1‑94 (MQ=60)
                                                                   GTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGG                           >  SRR4302540.2003153/1‑94 (MQ=60)
                                                                    TAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGT                          <  SRR4302540.3281057/94‑1 (MQ=60)
                                                                      GGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGG                        <  SRR4302540.3484352/94‑1 (MQ=60)
                                                                      GGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGG                        >  SRR4302540.5108789/1‑94 (MQ=60)
                                                                      GGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGG                        >  SRR4302540.3309111/1‑94 (MQ=60)
                                                                        TGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGA                      <  SRR4302540.3743656/94‑1 (MQ=60)
                                                                        TGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGA                      >  SRR4302540.701553/1‑94 (MQ=60)
                                                                         GATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAA                     <  SRR4302540.3075627/94‑1 (MQ=60)
                                                                          ATGCTACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAAT                    <  SRR4302540.3117778/94‑1 (MQ=60)
                                                                          ATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAAT                    >  SRR4302540.9250602/1‑94 (MQ=60)
                                                                          ATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAAT                    >  SRR4302540.7668275/1‑94 (MQ=60)
                                                                          ATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAAT                    >  SRR4302540.7138755/1‑94 (MQ=60)
                                                                          ATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAAG                    >  SRR4302540.7668276/1‑94 (MQ=60)
                                                                             CGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGG                 <  SRR4302540.48878/94‑1 (MQ=60)
                                                                             CGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGG                 <  SRR4302540.3976928/94‑1 (MQ=60)
                                                                              GACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGC                >  SRR4302540.8898828/1‑94 (MQ=60)
                                                                                CACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTAGTGGCGAAGGTGGGAATGGGCAT              <  SRR4302540.1820833/94‑1 (MQ=60)
                                                                                CACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCAT              <  SRR4302540.7518316/94‑1 (MQ=60)
                                                                                CACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCAT              <  SRR4302540.917401/94‑1 (MQ=60)
                                                                                CACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCAT              <  SRR4302540.9977255/94‑1 (MQ=60)
                                                                                CACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGCGGGAATGGGCAT              >  SRR4302540.1036140/1‑94 (MQ=60)
                                                                                 ACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATG             >  SRR4302540.3189756/1‑94 (MQ=60)
                                                                                 ACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATG             >  SRR4302540.6574028/1‑94 (MQ=60)
                                                                                 ACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATG             >  SRR4302540.3720248/1‑94 (MQ=60)
                                                                                  CCACAACCCTCTTCTGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGG            <  SRR4302540.4615230/94‑1 (MQ=60)
                                                                                   CACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGG           <  SRR4302540.3689829/94‑1 (MQ=60)
                                                                                    ACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGG          >  SRR4302540.9126128/1‑94 (MQ=60)
                                                                                    ACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGG          >  SRR4302540.3988657/1‑94 (MQ=60)
                                                                                     CAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGT         <  SRR4302540.9320373/94‑1 (MQ=60)
                                                                                        CCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCA      >  SRR4302540.1364892/1‑94 (MQ=60)
                                                                                        CCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCA      <  SRR4302540.8258564/94‑1 (MQ=60)
                                                                                        CCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCA      <  SRR4302540.1427350/94‑1 (MQ=60)
                                                                                         CCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCAC     <  SRR4302540.5968575/94‑1 (MQ=60)
                                                                                         CCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCAC     >  SRR4302540.3604475/1‑94 (MQ=60)
                                                                                         CCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCAC     >  SRR4302540.1541771/1‑94 (MQ=60)
                                                                                         CCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGGGGGAATGGGCATGGGGTCCAC     >  SRR4302540.3604474/1‑94 (MQ=60)
                                                                                          CTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCACC    <  SRR4302540.5455228/94‑1 (MQ=60)
                                                                                          CTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCACC    >  SRR4302540.7275331/1‑94 (MQ=60)
                                                                                          CTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCACC    >  SRR4302540.7394356/1‑94 (MQ=60)
                                                                                          CTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCACC    >  SRR4302540.7644860/1‑94 (MQ=60)
                                                                                            CTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCACCGT  >  SRR4302540.5403890/1‑94 (MQ=60)
                                                                                            |                                                                                             
TCCGCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTTTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCACCGT  >  NC_000913/2824705‑2824890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑