Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,844,373	T→C	Y41C (TAC→TGC)	hycE ←	large subunit of hydrogenase 3

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,844,373	0	T	C	93.8%	765.8 / 30.2	273	Y41C (TAC→TGC)	hycE	large subunit of hydrogenase 3
Reads supporting (aligned to +/- strand): ref base T (8/9); new base C (136/120); total (144/129)
Fisher's exact test for biased strand distribution p-value = 8.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.39e-01

Only 100 of 300 total aligned reads displayed.

AATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGA  >  NC_000913/2844281‑2844465

aaTGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGt                                                                                              >  2:1253670/1‑93 (MQ=255)

   gACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGt                                                                                           >  2:8905670/1‑93 (MQ=255)

     ccATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTc                                                                                         <  1:9758838/93‑1 (MQ=255)

      cATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTcc                                                                                        >  1:1346906/1‑92 (MQ=255)

        ttCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTCCAcc                                                                                      >  1:6529199/1‑93 (MQ=255)

         tCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCt                                                                                     >  2:7564206/1‑93 (MQ=255)

         tCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCt                                                                                     >  1:6892021/1‑93 (MQ=255)

           aGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCttt                                                                                   <  1:1716420/93‑1 (MQ=255)

            gTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTa                                                                                  <  2:603151/93‑1 (MQ=255)

            gTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTa                                                                                  <  2:9385999/93‑1 (MQ=255)

            gTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTa                                                                                  <  1:3980945/93‑1 (MQ=255)

             tttGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTAc                                                                                 >  1:5754550/1‑93 (MQ=255)

             tttGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTAc                                                                                 <  1:4418419/93‑1 (MQ=255)

              ttGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACg                                                                                <  1:745904/93‑1 (MQ=255)

               tGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACgg                                                                               <  2:2290002/93‑1 (MQ=255)

               tGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACgg                                                                               <  1:6886755/93‑1 (MQ=255)

               tGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACgg                                                                               >  2:3535995/1‑93 (MQ=255)

                 cGTTCGTCTTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTg                                                                             <  1:1932505/93‑1 (MQ=255)

                 cGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTACACCTTTACGGTg                                                                             <  2:6139172/93‑1 (MQ=255)

                  gTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGa                                                                            >  2:8175075/1‑93 (MQ=255)

                  gTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGa                                                                            <  1:2064216/93‑1 (MQ=255)

                   ttCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGAc                                                                           <  1:882645/93‑1 (MQ=255)

                   ttCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGAc                                                                           >  1:9013201/1‑93 (MQ=255)

                    tcgtcgTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACa                                                                          <  1:4838709/93‑1 (MQ=255)

                      gtcgtTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGt                                                                        >  1:4190767/1‑93 (MQ=255)

                        cgtTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCa                                                                      <  2:8631991/93‑1 (MQ=255)

                          ttACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGc                                                                    >  1:4739719/1‑93 (MQ=255)

                           tACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCt                                                                   >  1:7885297/1‑93 (MQ=255)

                            acgaaaCAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTg                                                                  <  2:387670/90‑1 (MQ=255)

                             ccAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGa                                                                 <  2:6452005/93‑1 (MQ=255)

                              cAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGAt                                                                >  2:4447658/1‑93 (MQ=255)

                              cAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGAt                                                                >  1:10023363/1‑93 (MQ=255)

                                 aCAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCtt                                                             <  1:6187354/93‑1 (MQ=255)

                                 aCAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCtt                                                             >  1:633999/1‑93 (MQ=255)

                                   aGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTg                                                           >  2:516809/1‑93 (MQ=255)

                                   aGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTg                                                           <  2:5395962/93‑1 (MQ=255)

                                    gCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTgg                                                          >  1:2549219/1‑93 (MQ=255)

                                     cACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCCGCTGATCTTTGGt                                                         >  1:7294648/1‑93 (MQ=255)

                                     cACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGt                                                         >  1:9903319/1‑93 (MQ=255)

                                     cACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGt                                                         <  1:840992/93‑1 (MQ=255)

                                       ccGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCt                                                       >  1:2982169/1‑93 (MQ=255)

                                        cGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTg                                                      >  1:3112164/1‑93 (MQ=255)

                                        cGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTg                                                      >  1:2760930/1‑93 (MQ=255)

                                          aCAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGcc                                                    <  2:8373553/93‑1 (MQ=255)

                                           cagccagcCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCa                                                   <  1:8121044/93‑1 (MQ=255)

                                            agccagccACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAg                                                  <  1:595636/93‑1 (MQ=255)

                                             gccagccaCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAgg                                                 <  2:3295518/93‑1 (MQ=255)

                                             gccagccaCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAgg                                                 >  1:973099/1‑93 (MQ=255)

                                              ccagccaCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGc                                                <  2:470629/93‑1 (MQ=255)

                                                agccaCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGt                                              >  2:5959023/1‑93 (MQ=255)

                                                 gccaCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTg                                             >  2:2609023/1‑93 (MQ=255)

                                                 gccaCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTg                                             <  2:9522405/93‑1 (MQ=255)

                                                 gccaCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTg                                             >  2:10044611/1‑93 (MQ=255)

                                                 gccaCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGACAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTg                                             >  1:4969031/1‑93 (MQ=255)

                                                  ccaCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTgg                                            <  1:285514/93‑1 (MQ=255)

                                                   caCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGt                                           <  1:2223525/93‑1 (MQ=255)

                                                    aCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTc                                          >  2:4824440/1‑93 (MQ=255)

                                                    aCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTc                                          >  1:3874104/1‑93 (MQ=255)

                                                    aCCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTc                                          >  2:5813188/1‑93 (MQ=255)

                                                     cccTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTcc                                         <  2:4515041/93‑1 (MQ=255)

                                                     cccTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTcc                                         >  2:9847438/1‑93 (MQ=255)

                                                     cccTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTcc                                         >  1:5211570/1‑93 (MQ=255)

                                                      ccTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCa                                        <  1:916984/93‑1 (MQ=255)

                                                        tGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGc                                      <  2:2703314/93‑1 (MQ=255)

                                                         gTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCa                                     <  2:637738/93‑1 (MQ=255)

                                                         gTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCa                                     >  1:5789642/1‑93 (MQ=255)

                                                         gTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCa                                     <  2:2821534/93‑1 (MQ=255)

                                                         gTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCa                                     >  2:3609746/1‑93 (MQ=255)

                                                         gTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCa                                     >  2:5562499/1‑93 (MQ=255)

                                                          tttGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCac                                    >  1:2365123/1‑93 (MQ=255)

                                                          tttGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCac                                    <  2:1770817/93‑1 (MQ=255)

                                                          tttGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCac                                    <  1:3506166/93‑1 (MQ=255)

                                                             gtagtaAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCacgac                                 >  1:956680/1‑93 (MQ=255)

                                                             gtagtaAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCacgac                                 <  2:7082448/93‑1 (MQ=255)

                                                                gtaAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGcc                              <  1:8041958/93‑1 (MQ=255)

                                                                  aaaGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCg                            >  2:8542184/1‑93 (MQ=255)

                                                                  aaaGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCg                            >  2:4122921/1‑93 (MQ=255)

                                                                   aaGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGCGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCAgg                           >  1:3194135/1‑93 (MQ=255)

                                                                    aGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGa                          >  2:7346824/1‑93 (MQ=255)

                                                                      aaaCTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGaaa                        <  1:9943700/93‑1 (MQ=255)

                                                                      aaaCTCCACCACTTCCGGCAGCCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGaaa                        <  2:4986311/93‑1 (MQ=255)

                                                                       aaCTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAAt                       >  1:1507556/1‑93 (MQ=255)

                                                                        aCTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATg                      >  1:765119/1‑93 (MQ=255)

                                                                         cTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGc                     >  2:2450447/1‑93 (MQ=255)

                                                                         cTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGc                     >  1:5580600/1‑93 (MQ=255)

                                                                          tCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGcc                    >  2:6671781/1‑93 (MQ=255)

                                                                           ccaccaCTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCt                   >  2:1417783/1‑93 (MQ=255)

                                                                             cccacTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCa                 <  2:7900621/92‑1 (MQ=255)

                                                                              ccccTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCAt                <  2:1968019/90‑1 (MQ=255)

                                                                                acTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTc              >  1:129332/1‑93 (MQ=255)

                                                                                acTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTc              >  1:6382925/1‑93 (MQ=255)

                                                                                acTTACGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTc              <  1:8645265/93‑1 (MQ=255)

                                                                                  ttCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAg            >  1:5350385/1‑93 (MQ=255)

                                                                                  ttCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAg            >  2:2162521/1‑93 (MQ=255)

                                                                                   tCCGGCAGGCAGTTCACCTGTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAgc           <  2:9057795/93‑1 (MQ=255)

                                                                                     cGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAgcgc         >  2:1296281/1‑93 (MQ=255)

                                                                                       gcaggcagTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCgcgg       >  1:2118697/1‑93 (MQ=255)

                                                                                       gcaggcagTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCgcgg       <  2:3723823/93‑1 (MQ=255)

                                                                                         aGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCgcggcg     >  1:7692956/1‑93 (MQ=255)

                                                                                            tAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCgaga  <  1:9339648/93‑1 (MQ=255)

AATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGA  >  NC_000913/2844281‑2844465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TAATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGAT  >  NC_000913/2844280‑2844466

TAATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGC                                                                                               >  SRR4302540.4421081/1‑94 (MQ=60)

GAATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGC                                                                                               <  SRR4302540.1196529/94‑1 (MQ=60)

 AATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCA                                                                                              >  SRR4302540.4576767/1‑94 (MQ=60)

  ATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAG                                                                                             >  SRR4302540.3142963/1‑94 (MQ=60)

  ATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAG                                                                                             <  SRR4302540.5596294/94‑1 (MQ=60)

  ATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAG                                                                                             <  SRR4302540.6216188/94‑1 (MQ=60)

  ATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAG                                                                                             >  SRR4302540.220840/1‑94 (MQ=60)

  ATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGACAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAG                                                                                             >  SRR4302540.10009530/1‑94 (MQ=60)

   TTACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGT                                                                                            >  SRR4302540.2297987/1‑94 (MQ=60)

   TGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGT                                                                                            >  SRR4302540.10050561/1‑94 (MQ=60)

   TGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGT                                                                                            <  SRR4302540.4655197/94‑1 (MQ=60)

   TGACCATTCAGGTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGT                                                                                            <  SRR4302540.4853609/94‑1 (MQ=60)

    GACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTT                                                                                           >  SRR4302540.4756009/1‑94 (MQ=60)

    GACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTT                                                                                           >  SRR4302540.4982627/1‑94 (MQ=60)

     ACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTC                                                                                          >  SRR4302540.2566789/1‑94 (MQ=60)

     ACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAACCAGACACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTC                                                                                          >  SRR4302540.4026106/1‑94 (MQ=60)

      CCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCC                                                                                         >  SRR4302540.1361053/1‑94 (MQ=60)

      CCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCA                                                                                         <  SRR4302540.9873311/94‑1 (MQ=60)

      CCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCA                                                                                         <  SRR4302540.9873119/94‑1 (MQ=60)

       CATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCAC                                                                                        <  SRR4302540.5917326/94‑1 (MQ=60)

        ATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTCCACC                                                                                       >  SRR4302540.6601698/1‑94 (MQ=60)

         TTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCT                                                                                      >  SRR4302540.6968473/1‑94 (MQ=60)

          TCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTT                                                                                     >  SRR4302540.5667493/1‑94 (MQ=60)

           CAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTT                                                                                    >  SRR4302540.9858680/1‑94 (MQ=60)

            AGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTA                                                                                   <  SRR4302540.1734951/94‑1 (MQ=60)

            AGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTA                                                                                   <  SRR4302540.5945620/94‑1 (MQ=60)

             GTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTAC                                                                                  <  SRR4302540.6947106/94‑1 (MQ=60)

             GTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTAC                                                                                  >  SRR4302540.5818072/1‑94 (MQ=60)

             GTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTAC                                                                                  <  SRR4302540.6560992/94‑1 (MQ=60)

             GTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTAC                                                                                  >  SRR4302540.3953314/1‑94 (MQ=60)

             GTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTAC                                                                                  <  SRR4302540.4023822/94‑1 (MQ=60)

              TTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACG                                                                                 <  SRR4302540.4466296/94‑1 (MQ=60)

              TTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACG                                                                                 >  SRR4302540.3116933/1‑94 (MQ=60)

               TTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGG                                                                                <  SRR4302540.753848/94‑1 (MQ=60)

                TGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGT                                                                               <  SRR4302540.6963103/94‑1 (MQ=60)

                  CGTTCGTCTTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGA                                                                             <  SRR4302540.1953567/94‑1 (MQ=60)

                   GTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGAC                                                                            <  SRR4302540.2086427/94‑1 (MQ=60)

                   GTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGAC                                                                            >  SRR4302540.9121333/1‑94 (MQ=60)

                    TTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACA                                                                           <  SRR4302540.8588026/94‑1 (MQ=60)

                    TTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACA                                                                           <  SRR4302540.892010/94‑1 (MQ=60)

                     TCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAG                                                                          <  SRR4302540.4890536/94‑1 (MQ=60)

                     TCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAG                                                                          >  SRR4302540.4144180/1‑94 (MQ=60)

                     TCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAG                                                                          <  SRR4302540.2984950/94‑1 (MQ=60)

                      CGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGT                                                                         <  SRR4302540.9274891/94‑1 (MQ=60)

                      CGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGT                                                                         >  SRR4302540.4236343/1‑94 (MQ=60)

                       tgcgtgACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGGTCACCTTTACGGTGACAGTC                                                                        <  SRR4302540.7041395/88‑1 (MQ=60)

                       GTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTC                                                                        <  SRR4302540.444820/94‑1 (MQ=60)

                        TCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTACGGCAGGCAGTTCACCTTTACGGTGACAGTCA                                                                       >  SRR4302540.5845691/1‑94 (MQ=60)

                          GTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGC                                                                     >  SRR4302540.4790302/1‑94 (MQ=60)

                           TTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCT                                                                    <  SRR4302540.613939/94‑1 (MQ=60)

                           TTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCT                                                                    >  SRR4302540.7977357/1‑94 (MQ=60)

                            TACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTG                                                                   <  SRR4302540.5662180/94‑1 (MQ=60)

                              CCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGAT                                                                 >  SRR4302540.7772109/1‑94 (MQ=60)

                              CCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGAT                                                                 >  SRR4302540.1034412/1‑94 (MQ=60)

                              CCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGAT                                                                 >  SRR4302540.10139997/1‑94 (MQ=60)

                                 AACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTT                                                              >  SRR4302540.640739/1‑94 (MQ=60)

                                  ACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTT                                                             <  SRR4302540.4442182/94‑1 (MQ=60)

                                  ACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTT                                                             <  SRR4302540.1934352/94‑1 (MQ=60)

                                  ACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTT                                                             <  SRR4302540.6256255/94‑1 (MQ=60)

                                   CAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTG                                                            <  SRR4302540.820702/94‑1 (MQ=60)

                                   CAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTG                                                            <  SRR4302540.2277520/94‑1 (MQ=60)

                                    AGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGG                                                           >  SRR4302540.2576690/1‑94 (MQ=60)

                                    AGCACCCACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACGTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGG                                                           <  SRR4302540.2837272/94‑1 (MQ=60)

                                     GCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCCGCTGATCTTTGGT                                                          >  SRR4302540.7376059/1‑94 (MQ=60)

                                     GCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGT                                                          >  SRR4302540.10019025/1‑94 (MQ=60)

                                     GCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGT                                                          <  SRR4302540.10076578/94‑1 (MQ=60)

                                      CACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTC                                                         <  SRR4302540.849914/94‑1 (MQ=60)

                                      CACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTC                                                         <  SRR4302540.3291942/94‑1 (MQ=60)

                                       ACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCT                                                        >  SRR4302540.3015089/1‑94 (MQ=60)

                                       ACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCT                                                        <  SRR4302540.7562258/94‑1 (MQ=60)

                                        CCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTG                                                       <  SRR4302540.1361432/94‑1 (MQ=60)

                                        CCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTG                                                       >  SRR4302540.2790763/1‑94 (MQ=60)

                                        CCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTG                                                       >  SRR4302540.3146202/1‑94 (MQ=60)

                                        CCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTACGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTG                                                       <  SRR4302540.9054355/94‑1 (MQ=60)

                                            CAGCCAGCCACCCTGTTTGTATTAAAGAAACTCCCCCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAG                                                   <  SRR4302540.2758131/94‑1 (MQ=60)

                                            CAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAG                                                   <  SRR4302540.8215294/94‑1 (MQ=60)

                                            CAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAG                                                   <  SRR4302540.6071943/94‑1 (MQ=60)

                                            CAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAG                                                   <  SRR4302540.3587579/94‑1 (MQ=60)

                                             AGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGG                                                  >  SRR4302540.983101/1‑94 (MQ=60)

                                             AGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGG                                                  >  SRR4302540.1319186/1‑94 (MQ=60)

                                             AGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGG                                                  <  SRR4302540.602034/94‑1 (MQ=60)

                                             AGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGATGATCTTTGGTCTGTCAGG                                                  >  SRR4302540.1319187/1‑94 (MQ=60)

                                                CAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGT                                               >  SRR4302540.8945025/1‑94 (MQ=60)

                                                CAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGG                                               >  SRR4302540.5613313/1‑94 (MQ=60)

                                                 AGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTG                                              >  SRR4302540.8087028/1‑94 (MQ=60)

                                                 AGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTG                                              >  SRR4302540.1001562/1‑94 (MQ=60)

                                                 AGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCATG                                              <  SRR4302540.5283389/94‑1 (MQ=60)

                                                 AGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGACAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTG                                              >  SRR4302540.5022795/1‑94 (MQ=60)

                                                   CCACCCTGTTTGTAGTAAAGAAACTCCCCCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGT                                            <  SRR4302540.5369114/94‑1 (MQ=60)

                                                   CCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGT                                            <  SRR4302540.288326/94‑1 (MQ=60)

                                                   CCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGT                                            <  SRR4302540.8198978/94‑1 (MQ=60)

                                                    CACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTC                                           >  SRR4302540.219358/1‑94 (MQ=60)

                                                    CACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTC                                           <  SRR4302540.6363811/94‑1 (MQ=60)

                                                    CACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTC                                           <  SRR4302540.2247492/94‑1 (MQ=60)

                                                    CACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTC                                           >  SRR4302540.3916209/1‑94 (MQ=60)

                                                    CACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTC                                           >  SRR4302540.9462164/1‑94 (MQ=60)

                                                     ACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCC                                          >  SRR4302540.5268354/1‑94 (MQ=60)

                                                     ACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCC                                          >  SRR4302540.4960876/1‑94 (MQ=60)

                                                     ACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCC                                          >  SRR4302540.7773552/1‑94 (MQ=60)

                                                     ACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCC                                          >  SRR4302540.8173567/1‑94 (MQ=60)

                                                      CCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCA                                         >  SRR4302540.9689666/1‑94 (MQ=60)

                                                       CCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCTAG                                        >  SRR4302540.8292724/1‑94 (MQ=60)

                                                       CCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAG                                        <  SRR4302540.9278433/94‑1 (MQ=60)

                                                       CCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAG                                        <  SRR4302540.7623854/94‑1 (MQ=60)

                                                       CCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAG                                        <  SRR4302540.926668/94‑1 (MQ=60)

                                                        CTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGC                                       >  SRR4302540.3196995/1‑94 (MQ=60)

                                                         TGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCA                                      >  SRR4302540.5853610/1‑94 (MQ=60)

                                                         TGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCA                                      >  SRR4302540.5853612/1‑94 (MQ=60)

                                                          GTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCAC                                     >  SRR4302540.2390589/1‑94 (MQ=60)

                                                           TTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACG                                    >  SRR4302540.8889747/1‑94 (MQ=60)

                                                           TTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACG                                    <  SRR4302540.3544361/94‑1 (MQ=60)

                                                             TGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGAC                                  <  SRR4302540.5623390/94‑1 (MQ=60)

                                                             TGTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGAC                                  >  SRR4302540.966596/1‑94 (MQ=60)

                                                              GTAGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATATTTGGTCTGCCAGGCGCGGTCCAGCACGACG                                 >  SRR4302540.8906281/1‑94 (MQ=60)

                                                                AGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCC                               <  SRR4302540.3948795/94‑1 (MQ=60)

                                                                AGTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCTAGGCGTGGTCCAGCACGACGCC                               <  SRR4302540.1615661/94‑1 (MQ=60)

                                                                 GTAAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCC                              <  SRR4302540.8135397/94‑1 (MQ=60)

                                                                   AAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGG                            >  SRR4302540.3808155/1‑94 (MQ=60)

                                                                   AAAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGCGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCAGG                            >  SRR4302540.3228824/1‑94 (MQ=60)

                                                                    AAGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGA                           >  SRR4302540.3170464/1‑94 (MQ=60)

                                                                     AGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAA                          <  SRR4302540.9515414/94‑1 (MQ=60)

                                                                     AGAAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAA                          <  SRR4302540.3451649/94‑1 (MQ=60)

                                                                       AAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAAT                        >  SRR4302540.1524198/1‑94 (MQ=60)

                                                                       AAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACTGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAAT                        <  SRR4302540.854106/94‑1 (MQ=60)

                                                                       AAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAAT                        <  SRR4302540.10059823/94‑1 (MQ=60)

                                                                       AAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAAT                        <  SRR4302540.2691887/94‑1 (MQ=60)

                                                                       AAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAAT                        <  SRR4302540.2460515/94‑1 (MQ=60)

                                                                       AAACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAAG                        >  SRR4302540.2124600/1‑94 (MQ=60)

                                                                       AAACGCCCCCGCTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAAT                        <  SRR4302540.2106937/94‑1 (MQ=60)

                                                                        AACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATG                       >  SRR4302540.1476914/1‑94 (MQ=60)

                                                                        AACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATG                       >  SRR4302540.773265/1‑94 (MQ=60)

                                                                         ACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGGCAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGGCCAGCACGACGCCCGGAAATGC                      >  SRR4302540.2957897/1‑94 (MQ=60)

                                                                         ACTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGC                      >  SRR4302540.5642032/1‑94 (MQ=60)

                                                                          CTCCACCCCTTCCGGCAGGCAGTTCTCCTTTACGGTGACGGTCAGCTGATCTTTGGTCTGCCAGGAGTGGTCCCGCACGACGCCCGGAAATGCC                     <  SRR4302540.2547491/94‑1 (MQ=60)

                                                                          CTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCC                     >  SRR4302540.5156646/1‑94 (MQ=60)

                                                                          CTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCC                     >  SRR4302540.6441823/1‑94 (MQ=60)

                                                                          CTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCC                     >  SRR4302540.285875/1‑94 (MQ=60)

                                                                          CTCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCC                     >  SRR4302540.6441822/1‑94 (MQ=60)

                                                                           TCCACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCT                    >  SRR4302540.1681373/1‑94 (MQ=60)

                                                                            CCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTC                   <  SRR4302540.78484/94‑1 (MQ=60)

                                                                             CACCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCA                  >  SRR4302540.7408434/1‑94 (MQ=60)

                                                                               CCACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATT                <  SRR4302540.7497805/94‑1 (MQ=60)

                                                                                CACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTC               >  SRR4302540.130696/1‑94 (MQ=60)

                                                                                CACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTC               <  SRR4302540.4842485/94‑1 (MQ=60)

                                                                                CACTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTC               >  SRR4302540.6453981/1‑94 (MQ=60)

                                                                                 ACTTACGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCA              <  SRR4302540.8745691/94‑1 (MQ=60)

                                                                                  CTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAG             <  SRR4302540.9958267/94‑1 (MQ=60)

                                                                                  CTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAG             <  SRR4302540.7830801/94‑1 (MQ=60)

                                                                                  CTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAG             >  SRR4302540.5409098/1‑94 (MQ=60)

                                                                                  CTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAG             >  SRR4302540.6967522/1‑94 (MQ=60)

                                                                                  CTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAG             >  SRR4302540.6967521/1‑94 (MQ=60)

                                                                                  CTTCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAG             >  SRR4302540.6392407/1‑94 (MQ=60)

                                                                                    TCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGAACGACGCCCGGAAATGCCTCATTCAGCG           <  SRR4302540.5103492/94‑1 (MQ=60)

                                                                                    TCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCG           <  SRR4302540.9726423/94‑1 (MQ=60)

                                                                                    TCCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGAG           >  SRR4302540.7208858/1‑94 (MQ=60)

                                                                                     CCGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGC          <  SRR4302540.1746204/94‑1 (MQ=60)

                                                                                      CGGCGGGTAGTTCCCCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCG         <  SRR4302540.6498137/94‑1 (MQ=60)

                                                                                      CGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCG         >  SRR4302540.1270094/1‑94 (MQ=60)

                                                                                      CGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCG         >  SRR4302540.2051651/1‑94 (MQ=60)

                                                                                      CGGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCG         <  SRR4302540.6742126/94‑1 (MQ=60)

                                                                                       GGCAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGG        >  SRR4302540.2141436/1‑94 (MQ=60)

                                                                                         CAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCG      >  SRR4302540.7780504/1‑94 (MQ=60)

                                                                                         CAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCG      <  SRR4302540.8384103/94‑1 (MQ=60)

                                                                                         CAGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCG      >  SRR4302540.2037199/1‑94 (MQ=60)

                                                                                          AGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGA     >  SRR4302540.9419696/1‑94 (MQ=60)

                                                                                          AGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGA     >  SRR4302540.9419695/1‑94 (MQ=60)

                                                                                          AGGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGA     >  SRR4302540.8635655/1‑94 (MQ=60)

                                                                                           GGCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAG    <  SRR4302540.2477698/94‑1 (MQ=60)

                                                                                            GCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGA   >  SRR4302540.7790438/1‑94 (MQ=60)

                                                                                            GCAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGA   >  SRR4302540.7790439/1‑94 (MQ=60)

                                                                                             TAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGAT  <  SRR4302540.9450958/94‑1 (MQ=60)

                                                                                             CAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAcaa  >  SRR4302540.975573/1‑91 (MQ=60)

                                                                                             CAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGAT  <  SRR4302540.8903692/94‑1 (MQ=60)

                                                                                             CAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGAT  >  SRR4302540.335459/1‑94 (MQ=60)

                                                                                             CAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGAT  >  SRR4302540.975574/1‑94 (MQ=60)

                                                                                             CAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGGCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGAT  <  SRR4302540.3518927/94‑1 (MQ=60)

TAATGACCATTCAGTTTGCGTTCGTCGTTACCAAACAGCACCGACAGCCAGCCACCCTGTTTGTAGTAAAGAAACTCCACCACTTCCGGCAGGTAGTTCACCTTTACGGTGACAGTCAGCTGATCTTTGGTCTGCCAGGCGTGGTCCAGCACGACGCCCGGAAATGCCTCATTCAGCGCGGCGAGAT  >  NC_000913/2844280‑2844466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`