Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,844,596	A→G	R280R (CGT→CGC)	hycD ←	membrane‑spanning protein of hydrogenase 3

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,844,596	0	A	G	99.7%	1005.9 / ‑5.2	316	R280R (CGT→CGC)	hycD	membrane‑spanning protein of hydrogenase 3
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (140/175); total (141/175)
Fisher's exact test for biased strand distribution p-value = 4.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.05e-01

Only 100 of 321 total aligned reads displayed.

CTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGACGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCAC  >  NC_000913/2844506‑2844684

ctTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCg                                                                                        >  2:8826428/1‑93 (MQ=255)

ctTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCg                                                                                        >  2:8462883/1‑93 (MQ=255)

ctTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCg                                                                                        >  2:6453203/1‑93 (MQ=255)

 tttAATCACGCGGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCgg                                                                                       <  1:1248469/93‑1 (MQ=255)

 tttAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCgg                                                                                       >  2:305241/1‑93 (MQ=255)

  ttAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCggg                                                                                      >  1:5000917/1‑93 (MQ=255)

  ttAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCggg                                                                                      >  1:352692/1‑93 (MQ=255)

   tAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGc                                                                                     >  2:773007/1‑93 (MQ=255)

     aTCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCa                                                                                   >  2:2567316/1‑93 (MQ=255)

     aTCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCa                                                                                   >  1:5942449/1‑93 (MQ=255)

     aTCACGCCACCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCa                                                                                   <  1:2450447/93‑1 (MQ=255)

      tCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCAt                                                                                  >  2:1449084/1‑93 (MQ=255)

       cACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATg                                                                                 >  2:2884782/1‑93 (MQ=255)

       cACGCCCCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATg                                                                                 <  1:3238135/93‑1 (MQ=255)

        ccgccgcCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGc                                                                                <  2:3621954/92‑1 (MQ=255)

        aCGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGc                                                                                >  2:2132263/1‑93 (MQ=255)

        aCGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGc                                                                                >  1:4855773/1‑93 (MQ=255)

         cgccgcCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCt                                                                               <  2:9744317/93‑1 (MQ=255)

           ccgccAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGt                                                                             >  2:1021189/1‑93 (MQ=255)

            cgccAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGtt                                                                            <  2:4929494/93‑1 (MQ=255)

             tcaaGCAAGGAGACGACCGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGttt                                                                           <  1:2821034/90‑1 (MQ=255)

             cccAGCAAGGAGACGAACGCTAAAAATCCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGttt                                                                           <  2:7294647/92‑1 (MQ=255)

               cAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAGCCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTc                                                                         <  2:2271732/93‑1 (MQ=255)

               cAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGGCATGCTGTTTTc                                                                         >  2:6065464/1‑93 (MQ=255)

               cAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTc                                                                         >  2:1564401/1‑93 (MQ=255)

                aGCAAGGAGACGAACGATAAAAATGCAACGCCAAGCCCAGCCTAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGGTTTCg                                                                        <  1:267377/93‑1 (MQ=255)

                  cAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGaa                                                                      >  2:8795269/1‑93 (MQ=255)

                   aaGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAAc                                                                     <  2:9637725/93‑1 (MQ=255)

                   aaGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAAc                                                                     <  2:3767057/93‑1 (MQ=255)

                   aaGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAAc                                                                     <  1:5312635/93‑1 (MQ=255)

                    aGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACa                                                                    <  2:2492456/93‑1 (MQ=255)

                    aGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACa                                                                    <  1:5451577/93‑1 (MQ=255)

                    aGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACa                                                                    >  1:910271/1‑93 (MQ=255)

                     ggAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAg                                                                   >  2:7868894/1‑93 (MQ=255)

                     ggAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAg                                                                   >  1:4172692/1‑93 (MQ=255)

                       agaCGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAgcg                                                                 >  2:8413336/1‑93 (MQ=255)

                       agaCGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAgcg                                                                 >  2:2869383/1‑93 (MQ=255)

                        gatgAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAgcgc                                                                <  1:4472003/90‑1 (MQ=255)

                           gAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGAt                                                             >  1:6378544/1‑93 (MQ=255)

                               gCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAAcc                                                         <  1:8905670/93‑1 (MQ=255)

                                cTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCa                                                        <  1:1560561/93‑1 (MQ=255)

                                 tAAAAATGCAAAGCCAAGCCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAg                                                       <  2:136825/93‑1 (MQ=255)

                                  aaaaaTGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAgg                                                      <  1:5733863/93‑1 (MQ=255)

                                   aaaaTGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGa                                                     <  2:690729/93‑1 (MQ=255)

                                      aTGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGc                                                  <  2:8584653/93‑1 (MQ=255)

                                       tGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGcc                                                 <  1:3609746/93‑1 (MQ=255)

                                       tGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGcc                                                 <  2:5489080/93‑1 (MQ=255)

                                         cAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGa                                               <  2:4099949/93‑1 (MQ=255)

                                          cagcccAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGac                                              <  2:5605812/89‑1 (MQ=255)

                                          aaaGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGac                                              >  2:9377187/1‑93 (MQ=255)

                                          aaaGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGac                                              <  1:2162522/93‑1 (MQ=255)

                                           aaGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGacc                                             >  2:3960876/1‑93 (MQ=255)

                                            aGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGacca                                            <  2:5300433/93‑1 (MQ=255)

                                            aGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGacca                                            <  2:1663261/93‑1 (MQ=255)

                                             gCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGGTGTTTTCGTACAGCGCGATAACCAGGACGCCGaccac                                           >  1:4596468/1‑93 (MQ=255)

                                             gCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGaccac                                           >  1:2695823/1‑93 (MQ=255)

                                             agcAAACCCAGCCCAGGTAATGCGCTGAGTAATGTCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGaccac                                           <  1:1034148/91‑1 (MQ=255)

                                              gcAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGcccacc                                          <  1:1417783/92‑1 (MQ=255)

                                                aaaCCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAg                                        >  1:6462916/1‑93 (MQ=255)

                                                 aaCCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGt                                       <  1:3368356/93‑1 (MQ=255)

                                                   cccagcccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGttt                                     <  2:4452569/93‑1 (MQ=255)

                                                   cccagcccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGttt                                     >  2:6672044/1‑93 (MQ=255)

                                                    ccagcccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGtttt                                    <  2:9681046/93‑1 (MQ=255)

                                                      agcccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTAc                                  >  1:1735005/1‑93 (MQ=255)

                                                       acccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACg                                 <  2:5100659/92‑1 (MQ=255)

                                                        cccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGa                                <  2:8875169/93‑1 (MQ=255)

                                                        cccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGa                                <  1:9704972/93‑1 (MQ=255)

                                                         ccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGAt                               <  2:765119/93‑1 (MQ=255)

                                                          cagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATg                              <  1:7980638/93‑1 (MQ=255)

                                                          cagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATg                              >  2:8241187/1‑93 (MQ=255)

                                                          cagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATg                              >  2:8078357/1‑93 (MQ=255)

                                                           agGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATgg                             >  1:7022146/1‑93 (MQ=255)

                                                           agGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATgg                             >  1:8056727/1‑93 (MQ=255)

                                                            ggTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGc                            <  1:1886339/93‑1 (MQ=255)

                                                              gaaTGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCaa                          <  1:2608931/92‑1 (MQ=255)

                                                                    gcgGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCa                    <  1:8671610/93‑1 (MQ=255)

                                                                    gcgGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCa                    <  1:7113092/93‑1 (MQ=255)

                                                                    gcgGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCa                    <  1:6635523/93‑1 (MQ=255)

                                                                     cgGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAg                   >  1:4022811/1‑93 (MQ=255)

                                                                     cgGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAg                   >  1:3756638/1‑93 (MQ=255)

                                                                      ggAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAgc                  <  1:8127348/93‑1 (MQ=255)

                                                                       gAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAgcg                 >  1:6745410/1‑93 (MQ=255)

                                                                        aGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAgcgc                <  1:5625267/93‑1 (MQ=255)

                                                                        aGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAgcgc                >  1:8295062/1‑93 (MQ=255)

                                                                        aGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAgcgc                <  1:1296280/93‑1 (MQ=255)

                                                                         gTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGcc               <  1:7520449/93‑1 (MQ=255)

                                                                          tAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCca              >  1:9347526/1‑93 (MQ=255)

                                                                          tAATATCAAGACGCAGGCGGGCCAGGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTGACGAGGGCAAACACCAGCGCca              >  1:7673006/1‑93 (MQ=255)

                                                                            atatCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagc            >  1:6225618/1‑93 (MQ=255)

                                                                            atatCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagc            <  2:4539506/93‑1 (MQ=255)

                                                                             tatCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagca           <  2:4640097/93‑1 (MQ=255)

                                                                                 aaGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagcagcag       <  2:3162594/93‑1 (MQ=255)

                                                                                 aaGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagcagcag       <  2:9193659/93‑1 (MQ=255)

                                                                                  aGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGt      >  1:6517233/1‑93 (MQ=255)

                                                                                   gACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTc     <  1:9899753/93‑1 (MQ=255)

                                                                                   gACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTc     <  1:9782044/93‑1 (MQ=255)

                                                                                    aCGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTcc    >  2:8681806/1‑93 (MQ=255)

                                                                                    aCGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTcc    <  2:7131705/93‑1 (MQ=255)

                                                                                    aCGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTcc    <  2:5211569/93‑1 (MQ=255)

                                                                                      gCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCAc  <  1:8530634/93‑1 (MQ=255)

CTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGACGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCAC  >  NC_000913/2844506‑2844684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTCTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGACGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGG  >  NC_000913/2844504‑2844687

CTCTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGC                                                                                             <  SRR4302540.1174438/94‑1 (MQ=60)

 TCTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCG                                                                                            >  SRR4302540.8536292/1‑94 (MQ=60)

  CTTTACTCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGG                                                                                           <  SRR4302540.4167449/94‑1 (MQ=60)

   TTTAATCACGCGGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGG                                                                                          <  SRR4302540.1261216/94‑1 (MQ=60)

   TTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGG                                                                                          >  SRR4302540.356307/1‑94 (MQ=60)

   TTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGG                                                                                          >  SRR4302540.5055069/1‑94 (MQ=60)

   TTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGG                                                                                          >  SRR4302540.5055068/1‑94 (MQ=60)

      AATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCA                                                                                       >  SRR4302540.6008141/1‑94 (MQ=60)

       ATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCAT                                                                                      >  SRR4302540.8419205/1‑94 (MQ=60)

       ATCACGCCACCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCAT                                                                                      <  SRR4302540.2476831/94‑1 (MQ=60)

         CACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGC                                                                                    >  SRR4302540.4907825/1‑94 (MQ=60)

         CACGCCCCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGC                                                                                    <  SRR4302540.3273359/94‑1 (MQ=60)

          ACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCT                                                                                   <  SRR4302540.522352/94‑1 (MQ=60)

            GCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGT                                                                                 >  SRR4302540.2714679/1‑94 (MQ=60)

             CCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTT                                                                                <  SRR4302540.6478910/94‑1 (MQ=60)

              CGACAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTT                                                                               <  SRR4302540.1271398/94‑1 (MQ=60)

               tcaAGCAAGGAGACGACCGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTT                                                                              <  SRR4302540.2851505/91‑1 (MQ=60)

               GCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTT                                                                              >  SRR4302540.5910848/1‑94 (MQ=60)

                CCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTC                                                                             >  SRR4302540.3539451/1‑94 (MQ=60)

                CCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTC                                                                             <  SRR4302540.6740602/94‑1 (MQ=60)

                 CAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCG                                                                            <  SRR4302540.1891180/94‑1 (MQ=60)

                 CAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCG                                                                            <  SRR4302540.2487189/94‑1 (MQ=60)

                  AGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGA                                                                           >  SRR4302540.1637691/1‑94 (MQ=60)

                  AGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGA                                                                           <  SRR4302540.270007/94‑1 (MQ=60)

                  AGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGA                                                                           <  SRR4302540.270006/94‑1 (MQ=60)

                  AGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGA                                                                           >  SRR4302540.9659792/1‑94 (MQ=60)

                  AGCAAGGAGACGAACGATAAAAATGCAACGCCAAGCCCAGCCTAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGGTTTCGA                                                                           <  SRR4302540.270008/94‑1 (MQ=60)

                    CAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAAC                                                                         >  SRR4302540.1540043/1‑94 (MQ=60)

                     AAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACA                                                                        <  SRR4302540.9264946/94‑1 (MQ=60)

                     AAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACA                                                                        >  SRR4302540.919915/1‑94 (MQ=60)

                     AAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACA                                                                        <  SRR4302540.5370800/94‑1 (MQ=60)

                     AAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACA                                                                        <  SRR4302540.8078855/94‑1 (MQ=60)

                     AAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACA                                                                        <  SRR4302540.8641435/94‑1 (MQ=60)

                     AAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACACAGGCGGGCCACGCCGTTTTCCAACA                                                                        >  SRR4302540.5518101/1‑94 (MQ=60)

                      AGNANANGANCGCTAAAAATGNNAANCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAG                                                                       <  SRR4302540.833085/94‑1 (MQ=60)

                      AGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAG                                                                       >  SRR4302540.2710649/1‑94 (MQ=60)

                      AGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAG                                                                       <  SRR4302540.6989632/94‑1 (MQ=60)

                      AGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAG                                                                       >  SRR4302540.4217963/1‑94 (MQ=60)

                      AGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAG                                                                       <  SRR4302540.5719511/94‑1 (MQ=60)

                      AGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAG                                                                       <  SRR4302540.5511573/94‑1 (MQ=60)

                      AGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGGAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAG                                                                       >  SRR4302540.1745207/1‑94 (MQ=60)

                       GGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGC                                                                      <  SRR4302540.8995773/94‑1 (MQ=60)

                        GAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCG                                                                     <  SRR4302540.8682368/94‑1 (MQ=60)

                        GAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCG                                                                     <  SRR4302540.6789737/94‑1 (MQ=60)

                         AGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGC                                                                    <  SRR4302540.2844755/94‑1 (MQ=60)

                         AGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGC                                                                    >  SRR4302540.413551/1‑94 (MQ=60)

                          GATGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCG                                                                   <  SRR4302540.4520505/94‑1 (MQ=60)

                            CGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAGTATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGAT                                                                 <  SRR4302540.9875233/94‑1 (MQ=60)

                            CGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGAT                                                                 >  SRR4302540.6449555/1‑94 (MQ=60)

                            CGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGAT                                                                 <  SRR4302540.8286741/94‑1 (MQ=60)

                            CGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGAT                                                                 >  SRR4302540.945622/1‑94 (MQ=60)

                            CGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGAT                                                                 <  SRR4302540.1305330/94‑1 (MQ=60)

                             GAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATA                                                                >  SRR4302540.3348162/1‑94 (MQ=60)

                             GAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATA                                                                <  SRR4302540.6165715/94‑1 (MQ=60)

                             GAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATA                                                                <  SRR4302540.1240617/94‑1 (MQ=60)

                              AACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAA                                                               >  SRR4302540.7727455/1‑94 (MQ=60)

                               ACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAAC                                                              <  SRR4302540.802567/94‑1 (MQ=60)

                               ACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAAC                                                              >  SRR4302540.8137823/1‑94 (MQ=60)

                                CGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTCATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAAAC                                                             >  SRR4302540.3726163/1‑94 (MQ=60)

                                CGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACC                                                             <  SRR4302540.4495862/94‑1 (MQ=60)

                                CGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACC                                                             <  SRR4302540.505016/94‑1 (MQ=60)

                                CGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACC                                                             <  SRR4302540.9962549/94‑1 (MQ=60)

                                CGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACC                                                             >  SRR4302540.8049346/1‑94 (MQ=60)

                                 GCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCA                                                            <  SRR4302540.9008785/94‑1 (MQ=60)

                                 GCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCA                                                            <  SRR4302540.9008786/94‑1 (MQ=60)

                                  CTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAG                                                           <  SRR4302540.1577699/94‑1 (MQ=60)

                                    AAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGA                                                         <  SRR4302540.5797021/94‑1 (MQ=60)

                                    AAAAATGCAAAGCCAAACACAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGA                                                         <  SRR4302540.5797022/94‑1 (MQ=60)

                                     AAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGAC                                                        <  SRR4302540.1286558/94‑1 (MQ=60)

                                      AAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACG                                                       >  SRR4302540.7365543/1‑94 (MQ=60)

                                      AAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACG                                                       <  SRR4302540.2435195/94‑1 (MQ=60)

                                        ATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCC                                                     >  SRR4302540.635181/1‑94 (MQ=60)

                                        ATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCC                                                     <  SRR4302540.65515/94‑1 (MQ=60)

                                         TGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCG                                                    <  SRR4302540.2798451/94‑1 (MQ=60)

                                         TGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCG                                                    >  SRR4302540.4625763/1‑94 (MQ=60)

                                         TGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCG                                                    <  SRR4302540.3649199/94‑1 (MQ=60)

                                         TGCAAAGCCAAACCCAGCCCAGGTAATGCGCAGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCG                                                    <  SRR4302540.6745497/94‑1 (MQ=60)

                                           CAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGAC                                                  >  SRR4302540.2917272/1‑94 (MQ=60)

                                            AAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACC                                                 >  SRR4302540.3992552/1‑94 (MQ=60)

                                            AAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACC                                                 <  SRR4302540.2185815/94‑1 (MQ=60)

                                            AAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACC                                                 <  SRR4302540.2185816/94‑1 (MQ=60)

                                             AAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCC                                                >  SRR4302540.6377073/1‑94 (MQ=60)

                                              AGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGGTGTTTTCGTACAGCGCGATAACCAGGACGCCGACCA‑C                                              >  SRR4302540.4645900/1‑94 (MQ=60)

                                              AGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑C                                              >  SRR4302540.2724925/1‑94 (MQ=60)

                                              AGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑C                                              >  SRR4302540.5484096/1‑94 (MQ=60)

                                               agCAAACCCAGCCCAGGTAATGCGCTGAGTAATGTCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CC                                             <  SRR4302540.1044663/92‑1 (MQ=60)

                                                GCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGCCCA‑CCA                                            <  SRR4302540.1433106/94‑1 (MQ=60)

                                                 CAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAG                                           >  SRR4302540.6534842/1‑94 (MQ=60)

                                                 CAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAG                                           <  SRR4302540.2637186/94‑1 (MQ=60)

                                                 CAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAG                                           >  SRR4302540.988325/1‑94 (MQ=60)

                                                  CAACCCAGCCCAGGTAATGCGCGCAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGT                                          <  SRR4302540.4873163/94‑1 (MQ=60)

                                                  AAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGT                                          <  SRR4302540.8169002/94‑1 (MQ=60)

                                                   AACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTT                                         >  SRR4302540.7146366/1‑94 (MQ=60)

                                                   AACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTT                                         <  SRR4302540.3405194/94‑1 (MQ=60)

                                                    ACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTT                                        <  SRR4302540.7682091/94‑1 (MQ=60)

                                                    ACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTT                                        >  SRR4302540.8774454/1‑94 (MQ=60)

                                                    ACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTT                                        <  SRR4302540.9110960/94‑1 (MQ=60)

                                                     CCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTT                                       >  SRR4302540.665398/1‑94 (MQ=60)

                                                       CAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTAC                                     >  SRR4302540.1753737/1‑94 (MQ=60)

                                                        CGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACG                                    <  SRR4302540.3609446/94‑1 (MQ=60)

                                                        AGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACG                                    >  SRR4302540.5533460/1‑94 (MQ=60)

                                                         GCCGAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGA                                   <  SRR4302540.2175963/94‑1 (MQ=60)

                                                         GCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGA                                   >  SRR4302540.9851681/1‑94 (MQ=60)

                                                          CCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGAT                                  <  SRR4302540.9819046/94‑1 (MQ=60)

                                                          CCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGAT                                  >  SRR4302540.717802/1‑94 (MQ=60)

                                                          CCCAGGTAATGCGCGGAGTAATATCAAGACGCAGACGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGAT                                  >  SRR4302540.6969210/1‑94 (MQ=60)

                                                           CCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATG                                 <  SRR4302540.3617256/94‑1 (MQ=60)

                                                           CCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATG                                 <  SRR4302540.1058999/94‑1 (MQ=60)

                                                            CAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGG                                <  SRR4302540.7914349/94‑1 (MQ=60)

                                                            CAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGG                                >  SRR4302540.8150279/1‑94 (MQ=60)

                                                            CAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGG                                <  SRR4302540.8073590/94‑1 (MQ=60)

                                                            CAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGG                                >  SRR4302540.7100149/1‑94 (MQ=60)

                                                             AGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGC                               <  SRR4302540.5740325/94‑1 (MQ=60)

                                                              GGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCA                              >  SRR4302540.9630511/1‑94 (MQ=60)

                                                              GGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCA                              <  SRR4302540.1906991/94‑1 (MQ=60)

                                                               GTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAA                             <  SRR4302540.9402504/94‑1 (MQ=60)

                                                               GTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAA                             <  SRR4302540.3438350/94‑1 (MQ=60)

                                                                TAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAAT                            >  SRR4302540.5105621/1‑94 (MQ=60)

                                                                TAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAAT                            <  SRR4302540.2637090/94‑1 (MQ=60)

                                                                TAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAAT                            <  SRR4302540.3283813/94‑1 (MQ=60)

                                                                TAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAAT                            <  SRR4302540.5089172/94‑1 (MQ=60)

                                                                TAATGCGCGGAGTAATATCAAGACACGGGCGGGCCATGCTGTTTGCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAAT                            <  SRR4302540.4513828/94‑1 (MQ=60)

                                                                GAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAAT                            <  SRR4302540.2637091/94‑1 (MQ=60)

                                                                 AATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CGAGTTTTACGATGGCAATC                           >  SRR4302540.4646340/1‑94 (MQ=60)

                                                                 AATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATC                           <  SRR4302540.3707942/94‑1 (MQ=60)

                                                                   TGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCAC                         <  SRR4302540.8314049/94‑1 (MQ=60)

                                                                     CGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCA                       >  SRR4302540.8580897/1‑94 (MQ=60)

                                                                     CGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCA                       <  SRR4302540.6138648/94‑1 (MQ=60)

                                                                     CGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCA                       <  SRR4302540.4534027/94‑1 (MQ=60)

                                                                      GCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAG                      <  SRR4302540.7192270/94‑1 (MQ=60)

                                                                      GCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAG                      <  SRR4302540.6708953/94‑1 (MQ=60)

                                                                      GCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAG                      <  SRR4302540.8772339/94‑1 (MQ=60)

                                                                      GCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAG                      >  SRR4302540.3797620/1‑94 (MQ=60)

                                                                      GCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAG                      >  SRR4302540.4066169/1‑94 (MQ=60)

                                                                       CGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGC                     <  SRR4302540.2332104/94‑1 (MQ=60)

                                                                       CGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGC                     >  SRR4302540.6020395/1‑94 (MQ=60)

                                                                        GGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCG                    <  SRR4302540.8221680/94‑1 (MQ=60)

                                                                        GGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCG                    >  SRR4302540.6819943/1‑94 (MQ=60)

                                                                         GAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGC                   <  SRR4302540.8160721/94‑1 (MQ=60)

                                                                         GAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGC                   >  SRR4302540.8391382/1‑94 (MQ=60)

                                                                         GAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGC                   >  SRR4302540.3497852/1‑94 (MQ=60)

                                                                          AGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCC                  <  SRR4302540.1309702/94‑1 (MQ=60)

                                                                          AGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCC                  >  SRR4302540.654669/1‑94 (MQ=60)

                                                                          AGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCC                  <  SRR4302540.1309703/94‑1 (MQ=60)

                                                                          AGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCC                  <  SRR4302540.5687174/94‑1 (MQ=60)

                                                                           GTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCA                 <  SRR4302540.7604558/94‑1 (MQ=60)

                                                                           GTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCA                 >  SRR4302540.9458873/1‑94 (MQ=60)

                                                                           GTAATATCAAGACGCAGGCGGGCCAGGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTGACGAGGGCAAACACCAGCGCCA                 >  SRR4302540.7759623/1‑94 (MQ=60)

                                                                            TAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAG                <  SRR4302540.3165117/94‑1 (MQ=60)

                                                                             AATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGC               >  SRR4302540.6294859/1‑94 (MQ=60)

                                                                              ATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCA              >  SRR4302540.1781296/1‑94 (MQ=60)

                                                                              ATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACAAGGA‑GCCGGCCACCCAGTTTTACGAggcaattccccacccccagaa              >  SRR4302540.2677991/1‑73 (MQ=50)

                                                                               TATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAG             >  SRR4302540.441833/1‑94 (MQ=60)

                                                                                  CAAGACGCCGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAG          <  SRR4302540.1436489/94‑1 (MQ=60)

                                                                                  CAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAG          <  SRR4302540.1381240/94‑1 (MQ=60)

                                                                                  CAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAG          >  SRR4302540.6634274/1‑94 (MQ=60)

                                                                                   AAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGT         <  SRR4302540.7455592/94‑1 (MQ=60)

                                                                                   AAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGT         >  SRR4302540.6589627/1‑94 (MQ=60)

                                                                                    AGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGACAGCAGCAGTC        >  SRR4302540.5384514/1‑94 (MQ=60)

                                                                                     GACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCC       <  SRR4302540.10015406/94‑1 (MQ=60)

                                                                                     GACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCC       <  SRR4302540.9896684/94‑1 (MQ=60)

                                                                                     GACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCC       <  SRR4302540.6461121/94‑1 (MQ=60)

                                                                                      ACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCA      <  SRR4302540.4039190/94‑1 (MQ=60)

                                                                                       CGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCAC     >  SRR4302540.1650651/1‑94 (MQ=60)

                                                                                        GCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACC    <  SRR4302540.8629752/94‑1 (MQ=60)

                                                                                         CAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCG   >  SRR4302540.8154633/1‑94 (MQ=60)

                                                                                          AGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGG  >  SRR4302540.4331611/1‑94 (MQ=60)

                                                                                          AGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGG  >  SRR4302540.1555648/1‑94 (MQ=60)

CTCTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGACGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCA‑CCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGG  >  NC_000913/2844504‑2844687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`