Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,844,596 |
A→G |
R280R (CGT→CGC) |
hycD ← |
membrane‑spanning protein of hydrogenase 3 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,844,596 | 0 | A | G | 100.0%
| 604.3
/ NA
| 189 | R280R (CGT→CGC) | hycD | membrane‑spanning protein of hydrogenase 3 |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (108/81); total (108/81) |
Only 100 of 194 total aligned reads displayed.
CTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGACGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACC > NC_000913/2844506‑2844685
|
tttAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCgg < 1:5114775/93‑1 (MQ=255)
aaTCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGcc > 2:4186779/1‑93 (MQ=255)
aTCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCa > 2:4812348/1‑93 (MQ=255)
aTCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCa < 2:3310963/93‑1 (MQ=255)
aCGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGc < 2:2569500/93‑1 (MQ=255)
aCGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGc > 2:2479497/1‑93 (MQ=255)
aCGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGCAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATgt > 2:4987066/1‑92 (MQ=255)
aCGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGCAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATga > 1:1675668/1‑92 (MQ=255)
cgccgcCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCt < 1:5767580/93‑1 (MQ=255)
ccgccAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGt < 1:3632976/93‑1 (MQ=255)
cgccAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGtt > 2:3507858/1‑93 (MQ=255)
ccAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGtttt > 1:3105064/1‑93 (MQ=255)
ccAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGtttt < 1:2846446/93‑1 (MQ=255)
aGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCg > 1:5491794/1‑93 (MQ=255)
aGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGACATGCTGTTTTCg > 1:3251332/1‑93 (MQ=255)
gCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGa > 1:1877209/1‑93 (MQ=255)
gCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGa < 2:1896168/93‑1 (MQ=255)
cAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGaa < 2:1668903/93‑1 (MQ=255)
aaGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGaaa > 2:1462267/1‑92 (MQ=255)
aaGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAAc < 2:6086611/93‑1 (MQ=255)
aGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACa < 2:2245649/93‑1 (MQ=255)
aGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACa < 2:1883998/93‑1 (MQ=255)
ggAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAg < 1:3225857/93‑1 (MQ=255)
ggAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAg > 1:5542759/1‑93 (MQ=255)
gaCGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAgcgc < 2:1993810/93‑1 (MQ=255)
gaCGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAgcgc < 1:474790/93‑1 (MQ=255)
gaCGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAgcgc > 1:350170/1‑93 (MQ=255)
aaCGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAgcgc < 1:4517356/92‑1 (MQ=255)
aCGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGcgcg > 1:770378/1‑93 (MQ=255)
gAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGAt > 1:913482/1‑93 (MQ=255)
gAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGAAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGGGAt > 2:5745294/1‑93 (MQ=255)
aaCGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATa > 2:3355629/1‑93 (MQ=255)
aCGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATaa > 2:5776199/1‑93 (MQ=255)
aCGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATaa > 1:5976347/1‑93 (MQ=255)
aCGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATaa < 1:4954743/93‑1 (MQ=255)
aCGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATaa < 1:1846880/93‑1 (MQ=255)
cTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCa > 2:3876494/1‑93 (MQ=255)
tAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAg > 1:2011875/1‑93 (MQ=255)
aaaaaTGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAgg < 2:3062021/93‑1 (MQ=255)
aaaaTGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGa < 2:3624741/93‑1 (MQ=255)
aaaaTGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGGAATATCAAGACGCAGGCGGGCCATGCTGCGTTCGAACAGTGCGATAACCAGGa > 2:6309544/1‑93 (MQ=255)
aaaTGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGAc < 1:5813019/93‑1 (MQ=255)
aTGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGc > 1:4077247/1‑93 (MQ=255)
tGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGcc < 1:4103717/93‑1 (MQ=255)
tGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGcc > 1:5070807/1‑93 (MQ=255)
gCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCg > 2:4389879/1‑93 (MQ=255)
cAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGa > 1:6241939/1‑93 (MQ=255)
aaaGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGac > 2:3135066/1‑93 (MQ=255)
aaaGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGac > 1:3770679/1‑93 (MQ=255)
gCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGaccac > 1:2402643/1‑93 (MQ=255)
gCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGaccac > 1:5442216/1‑93 (MQ=255)
aaCCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGt > 2:4847623/1‑93 (MQ=255)
aCCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGtt > 1:5013217/1‑93 (MQ=255)
aCCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGtc < 2:6051092/93‑2 (MQ=255)
cccagcccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGCTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGttt < 2:4217572/93‑1 (MQ=255)
agcccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTAc > 1:3067329/1‑93 (MQ=255)
gcccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACTACCAGTTTTACg < 1:3020893/93‑1 (MQ=255)
gcccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACg > 1:4299091/1‑93 (MQ=255)
cccagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGa > 1:2152298/1‑93 (MQ=255)
cagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGCTg > 2:2870992/1‑93 (MQ=255)
cagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATg > 1:1005228/1‑93 (MQ=255)
cagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATg > 2:3759222/1‑93 (MQ=255)
cagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATg > 2:1965202/1‑93 (MQ=255)
cagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATg > 2:733237/1‑93 (MQ=255)
cagGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGAACACCAGTTTTACGATg > 2:2870993/1‑93 (MQ=255)
ggTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCCTGCTGGTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGc > 2:5293597/1‑93 (MQ=255)
ggTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGc > 1:3796235/1‑93 (MQ=255)
ggTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGc > 1:2760997/1‑93 (MQ=255)
ggTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGc < 1:2622406/93‑1 (MQ=255)
gTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCa > 2:4902536/1‑93 (MQ=255)
tAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCaa > 2:1061386/1‑93 (MQ=255)
aTGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATc < 1:1197051/93‑1 (MQ=255)
aTGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATc < 1:1545636/93‑1 (MQ=255)
tGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCa < 2:3713137/93‑1 (MQ=255)
gcgcGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCAc > 2:425243/1‑93 (MQ=255)
cgcgGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCAcc < 1:1471864/93‑1 (MQ=255)
cgcgGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCAcc < 1:3328888/93‑1 (MQ=255)
cgGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAg < 2:4593439/93‑1 (MQ=255)
cgGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAg < 1:4377013/93‑1 (MQ=255)
cgGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAg < 2:1407348/93‑1 (MQ=255)
ggAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAgc > 1:697749/1‑93 (MQ=255)
gAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAgcg > 1:4005828/1‑93 (MQ=255)
gAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAgcg > 1:4044947/1‑93 (MQ=255)
tAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCca < 2:741637/93‑1 (MQ=255)
tAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCca > 1:2077533/1‑93 (MQ=255)
tatCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagca > 1:801182/1‑93 (MQ=255)
atCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagcag > 1:3064208/1‑93 (MQ=255)
tCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagcagc < 2:2668636/93‑1 (MQ=255)
cAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagcagca > 2:4472704/1‑93 (MQ=255)
cAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagcagca > 2:3730687/1‑93 (MQ=255)
cAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagcagca > 1:938329/1‑93 (MQ=255)
aaGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCcagcagcag > 1:5246798/1‑93 (MQ=255)
aGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGt > 2:411798/1‑93 (MQ=255)
aGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGt < 2:5095424/93‑1 (MQ=255)
aGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGt > 2:5652461/1‑93 (MQ=255)
aGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGt < 1:5383311/93‑1 (MQ=255)
aCGCAGGCGGTCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTcc < 2:46287/93‑1 (MQ=255)
cGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCa < 1:3000867/93‑1 (MQ=255)
gCAGGCGGGCCATGCTTTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCAc < 1:1159906/93‑1 (MQ=255)
gCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACTATGGCAATCACCAGCGCCAGCAGCAGTCGAc > 1:234450/1‑93 (MQ=255)
|
CTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGACGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACC > NC_000913/2844506‑2844685
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTCTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGACGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCG > NC_000913/2844503‑2844689
|
TCTCTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGG > SRR4302533.1013806/1‑94 (MQ=60)
TCTCTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGG > SRR4302533.270850/1‑94 (MQ=60)
TCTTTACTCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCG < SRR4302533.4616205/94‑1 (MQ=60)
TTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGG > SRR4302533.5659347/1‑94 (MQ=60)
TTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGG < SRR4302533.5145685/94‑1 (MQ=60)
TTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGG < SRR4302533.850847/94‑1 (MQ=60)
TTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGC > SRR4302533.4073356/1‑94 (MQ=60)
AATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCA > SRR4302533.3716244/1‑94 (MQ=60)
ATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCAT < SRR4302533.147571/94‑1 (MQ=60)
CACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGCAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGA > SRR4302533.1685814/1‑94 (MQ=60)
ACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCT > SRR4302533.1515857/1‑94 (MQ=60)
CGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTG < SRR4302533.5802397/94‑1 (MQ=60)
GCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGT < SRR4302533.1609870/94‑1 (MQ=60)
CCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTT < SRR4302533.3655326/94‑1 (MQ=60)
CGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTT > SRR4302533.1943869/1‑94 (MQ=60)
GCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTT > SRR4302533.3124151/1‑94 (MQ=60)
CCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTC < SRR4302533.2863965/94‑1 (MQ=60)
CAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCG > SRR4302533.5524922/1‑94 (MQ=60)
CAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCG > SRR4302533.1186038/1‑94 (MQ=60)
CAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGACATGCTGTTTTCG > SRR4302533.3271380/1‑94 (MQ=60)
AGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGA > SRR4302533.1888651/1‑94 (MQ=60)
AAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACA > SRR4302533.5895862/1‑94 (MQ=60)
AGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAG > SRR4302533.5576234/1‑94 (MQ=60)
AGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAG < SRR4302533.1708033/94‑1 (MQ=60)
GGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGC < SRR4302533.3245746/94‑1 (MQ=60)
GAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCG > SRR4302533.3500576/1‑94 (MQ=60)
GAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGATGTTTTCGAACAGCG < SRR4302533.3815891/94‑1 (MQ=60)
AGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGC > SRR4302533.352304/1‑94 (MQ=60)
GACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCG < SRR4302533.4122065/94‑1 (MQ=60)
GACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCG < SRR4302533.477626/94‑1 (MQ=60)
GACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCG < SRR4302533.3110128/94‑1 (MQ=60)
GACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCG > SRR4302533.774913/1‑94 (MQ=60)
AACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCG < SRR4302533.4544713/94‑1 (MQ=60)
CGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGAT > SRR4302533.918851/1‑94 (MQ=60)
GAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATA < SRR4302533.3963011/94‑1 (MQ=60)
AACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAA > SRR4302533.6012539/1‑94 (MQ=60)
ACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAAC < SRR4302533.1858140/94‑1 (MQ=60)
ACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAAC < SRR4302533.4984756/94‑1 (MQ=60)
ACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAAC < SRR4302533.617437/94‑1 (MQ=60)
CTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAG > SRR4302533.2024268/1‑94 (MQ=60)
CTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAG < SRR4302533.223581/94‑1 (MQ=60)
AAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGAC < SRR4302533.3176505/94‑1 (MQ=60)
AAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGAC < SRR4302533.4726207/94‑1 (MQ=60)
AAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGAC > SRR4302533.5821158/1‑94 (MQ=60)
AAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACG < SRR4302533.5848127/94‑1 (MQ=60)
AAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACG > SRR4302533.680847/1‑94 (MQ=60)
AATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGC > SRR4302533.4102068/1‑94 (MQ=60)
ATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCC > SRR4302533.5101460/1‑94 (MQ=60)
ATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCC < SRR4302533.5262800/94‑1 (MQ=60)
TGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCG < SRR4302533.4128680/94‑1 (MQ=60)
GCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGA > SRR4302533.6279308/1‑94 (MQ=60)
CAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGAC > SRR4302533.5296737/1‑94 (MQ=60)
CAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGAC > SRR4302533.2154623/1‑94 (MQ=60)
CAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGAC > SRR4302533.3793797/1‑94 (MQ=60)
AAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACC < SRR4302533.2036787/94‑1 (MQ=60)
AGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCAC > SRR4302533.512228/1‑94 (MQ=60)
AGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCAC > SRR4302533.5475000/1‑94 (MQ=60)
AGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCAC > SRR4302533.2417481/1‑94 (MQ=60)
AACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTT > SRR4302533.5043591/1‑94 (MQ=60)
ACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTT > SRR4302533.4870699/1‑94 (MQ=60)
CAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTAC > SRR4302533.3086169/1‑94 (MQ=60)
AGCCGAGGTAATCCGCGTAGTACTATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGGGCGATAACCAGGACGCCGACCACCAGTTTTACG < SRR4302533.3121798/94‑1 (MQ=60)
AGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCANGACGCCGACCACCAGTTTTNCG > SRR4302533.5062381/1‑94 (MQ=60)
AGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACG > SRR4302533.4324947/1‑94 (MQ=60)
GCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACTACCAGTTTTACGA < SRR4302533.3039381/94‑1 (MQ=60)
GCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGA > SRR4302533.2165555/1‑94 (MQ=60)
CCCAGGTAATGCGCGGAGTAATATCGAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGAT > SRR4302533.5532612/1‑94 (MQ=60)
CCCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGAT < SRR4302533.43481/94‑1 (MQ=60)
CCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATG > SRR4302533.1011108/1‑94 (MQ=60)
CCAGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATG < SRR4302533.2830654/94‑1 (MQ=60)
AGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGC > SRR4302533.3819472/1‑94 (MQ=60)
AGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGC > SRR4302533.75143/1‑94 (MQ=60)
AGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGC < SRR4302533.305209/94‑1 (MQ=60)
AGGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGC > SRR4302533.2777919/1‑94 (MQ=60)
GGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCTCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCA < SRR4302533.1859566/94‑1 (MQ=60)
GGTAATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCA < SRR4302533.2638501/94‑1 (MQ=60)
AATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATC < SRR4302533.4232998/94‑1 (MQ=60)
ATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCA < SRR4302533.1554950/94‑1 (MQ=60)
ATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCA < SRR4302533.1204241/94‑1 (MQ=60)
ATGCGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCA > SRR4302533.333250/1‑94 (MQ=60)
CGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCA < SRR4302533.1480761/94‑1 (MQ=60)
CGCGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCA < SRR4302533.3349461/94‑1 (MQ=60)
CGGAGTAATATCAAGACGCAGGCGGGCCCTGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGC > SRR4302533.920396/1‑94 (MQ=60)
CGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGC < SRR4302533.4403437/94‑1 (MQ=60)
CGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGC > SRR4302533.701877/1‑94 (MQ=60)
CGGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGC < SRR4302533.3086111/94‑1 (MQ=60)
GGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCG > SRR4302533.2417407/1‑94 (MQ=60)
GGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCG > SRR4302533.5461214/1‑94 (MQ=60)
GGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCG > SRR4302533.4030215/1‑94 (MQ=60)
GGAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCG > SRR4302533.4069566/1‑94 (MQ=60)
GAGTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCACTCACCAGCGC > SRR4302533.3270220/1‑94 (MQ=60)
GTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCA > SRR4302533.2090320/1‑94 (MQ=60)
GTAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCA > SRR4302533.5482034/1‑94 (MQ=60)
TAATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAG > SRR4302533.2614436/1‑94 (MQ=60)
AATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGC > SRR4302533.5017113/1‑94 (MQ=60)
ATATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCA > SRR4302533.805893/1‑94 (MQ=60)
TATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAG > SRR4302533.3083024/1‑94 (MQ=60)
ATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGC < SRR4302533.2646515/94‑1 (MQ=60)
ATCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGC > SRR4302533.3626090/1‑94 (MQ=60)
TCAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCA > SRR4302533.943841/1‑94 (MQ=60)
CAAGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAG > SRR4302533.5278345/1‑94 (MQ=60)
AGACGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTC < SRR4302533.5415655/94‑1 (MQ=60)
ACGCAGGCGGGCCATGCTGTTTTCGAACAGCACGATAACCAGGACGCCGCCCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCA < SRR4302533.4047834/94‑1 (MQ=60)
CGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACTATGGCAATCACCAGCGCCAGCAGCAGTCGAC > SRR4302533.235898/1‑94 (MQ=60)
CGCAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCAC < SRR4302533.3019219/94‑1 (MQ=60)
GCAGGCGGGCCATGCTTTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACC < SRR4302533.1166865/94‑1 (MQ=60)
CAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCG < SRR4302533.2956701/94‑1 (MQ=60)
CAGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCG > SRR4302533.5200814/1‑94 (MQ=60)
AGGCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGG > SRR4302533.4442694/1‑94 (MQ=60)
GCGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCG < SRR4302533.3672456/94‑1 (MQ=60)
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TCTCTTTAATCACGCCGCCAGCAAGGAGACGAACGCTAAAAATGCAAAGCCAAACCCAGCCCAGGTAATGCGCGGAGTAATATCAAGACGCAGACGGGCCATGCTGTTTTCGAACAGCGCGATAACCAGGACGCCGACCACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCG > NC_000913/2844503‑2844689
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
