Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,896,819	+C	coding (622/657 nt)	ygcU ←	putative oxidoreductase subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,896,818	1	.	C	99.7%	1216.6 / ‑5.7	380	A208G (GCA→GGA)	ygcU	putative oxidoreductase subunit
Reads supporting (aligned to +/- strand): ref base . (0/1); major base C (196/182); minor base T (1/0); total (197/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01

Only 100 of 426 total aligned reads displayed.

TCCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑CGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCT  >  NC_000913/2896726‑2896904

 ccAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑c                                                                                       >  1:6828906/1‑93 (MQ=255)

 ccAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑c                                                                                       <  1:5585969/93‑1 (MQ=255)

 ccAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑c                                                                                       >  2:3341787/1‑93 (MQ=255)

 ccAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑c                                                                                       <  2:6850148/93‑1 (MQ=255)

 ccAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑c                                                                                       >  1:4672049/1‑93 (MQ=255)

 ccAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑c                                                                                       >  1:2821908/1‑93 (MQ=255)

   aGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑ccg                                                                                     >  2:409871/1‑91 (MQ=255)

   aGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑ccg                                                                                     >  1:3077508/1‑91 (MQ=255)

    ggATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑ccga                                                                                    >  2:3687852/1‑90 (MQ=255)

       tataGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCgatga                                                                                  >  1:7435035/1‑93 (MQ=255)

       tataGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCgatga                                                                                  >  1:1178412/1‑93 (MQ=255)

       tataGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCgatga                                                                                  >  2:5638325/1‑93 (MQ=255)

       tataGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCgatga                                                                                  >  1:4314837/1‑93 (MQ=255)

          aGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCgatgatga                                                                               >  1:3589805/1‑93 (MQ=255)

          aGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCgatgatga                                                                               <  2:1650060/93‑1 (MQ=255)

           gCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCgatgatgat                                                                              >  2:10015123/1‑93 (MQ=255)

            ccGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGatgatgatg                                                                             <  2:7550929/93‑1 (MQ=255)

            ccGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGatgatgatg                                                                             <  1:3801463/93‑1 (MQ=255)

            ccGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGatgatgatg                                                                             <  2:5281704/93‑1 (MQ=255)

             cGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGAtgt                                                                            <  1:6529785/93‑1 (MQ=255)

             cGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGAtgt                                                                            <  2:1765478/93‑1 (MQ=255)

              gTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGAtgtg                                                                           >  2:1208615/1‑93 (MQ=255)

               tAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGa                                                                          >  2:4504967/1‑93 (MQ=255)

               tAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGa                                                                          >  2:2840517/1‑93 (MQ=255)

               tAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGa                                                                          >  1:2244587/1‑93 (MQ=255)

                  aagaGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGa                                                                       >  1:3228365/1‑93 (MQ=255)

                   agagGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGaa                                                                      <  1:3024427/93‑1 (MQ=255)

                   agagGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGaa                                                                      <  2:7046997/93‑1 (MQ=255)

                   agagGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGaa                                                                      <  1:4123726/93‑1 (MQ=255)

                    gagGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAAt                                                                     >  2:5050876/1‑93 (MQ=255)

                    gagGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAAt                                                                     <  2:9524569/93‑1 (MQ=255)

                     agGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATg                                                                    >  1:1038109/1‑93 (MQ=255)

                      ggTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGt                                                                   >  2:8208026/1‑93 (MQ=255)

                       gttgttTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTc                                                                  <  1:458502/93‑1 (MQ=255)

                        ttgttTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTcc                                                                 <  2:3892124/93‑1 (MQ=255)

                        ttgttTTCCGGGGTGAATTTAAAGATTTTCACTGGTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTcc                                                                 <  1:2943064/93‑1 (MQ=255)

                         tgttTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCg                                                                <  1:9232699/93‑1 (MQ=255)

                           ttttCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCggg                                                              <  2:9794065/93‑1 (MQ=255)

                            tttCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGc                                                             <  2:4622606/93‑1 (MQ=255)

                                  gggTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCcg                                                       >  2:5162361/1‑93 (MQ=255)

                                   ggTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCcgc                                                      <  1:6926684/93‑1 (MQ=255)

                                     tGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCcgcgc                                                    >  2:9154310/1‑93 (MQ=255)

                                       aaTTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCgcgg                                                  <  2:6142222/93‑1 (MQ=255)

                                       aaTTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCgcgg                                                  <  2:9264288/93‑1 (MQ=255)

                                        aTTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCgcggc                                                 >  1:5962675/1‑93 (MQ=255)

                                         tttAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCgcggcg                                                <  2:3529060/93‑1 (MQ=255)

                                         tttAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCgcggcg                                                <  2:7321581/93‑1 (MQ=255)

                                          ttAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGt                                               <  2:4770525/93‑1 (MQ=255)

                                           tAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTg                                              >  1:9040635/1‑93 (MQ=255)

                                           tAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTg                                              >  1:1892730/1‑93 (MQ=255)

                                           tAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTg                                              >  1:7607787/1‑93 (MQ=255)

                                            aaaGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTgg                                             <  2:5804421/93‑1 (MQ=255)

                                             aaGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGc                                            <  1:1831689/93‑1 (MQ=255)

                                               gATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCAc                                          <  1:537969/93‑1 (MQ=255)

                                               aaTTTTCACTGTTACTCCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCAc                                          <  2:641771/92‑1 (MQ=255)

                                                aTTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATATGACGAATGTACGATCCAGCCGCGCGGCGAGTCACg                                         >  2:550713/1‑93 (MQ=255)

                                                 ttttCACGGTTACTTCAGTGATATAGCACAATGCACCTGCGTTGCCGATGATTATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGt                                        <  1:5213625/93‑1 (MQ=255)

                                                  tttCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGtt                                       >  2:3768084/1‑93 (MQ=255)

                                                   ttCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGttt                                      >  1:8869741/1‑93 (MQ=255)

                                                    tCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGtttt                                     >  1:1514889/1‑93 (MQ=255)

                                                    tCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGACGTGGCACGtttt                                     <  2:5384448/93‑1 (MQ=255)

                                                      aCTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTa                                   >  1:5088797/1‑93 (MQ=255)

                                                      aCTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTa                                   >  2:8349108/1‑93 (MQ=255)

                                                      aCTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGGGGCACGTTTTTa                                   >  2:8986250/1‑93 (MQ=255)

                                                       cTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTaa                                  <  1:397590/93‑1 (MQ=255)

                                                       cTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTaa                                  <  1:10006720/93‑1 (MQ=255)

                                                       cTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTaa                                  <  1:8562920/93‑1 (MQ=255)

                                                        tGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAt                                 <  2:783680/93‑1 (MQ=255)

                                                          ttACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGc                               >  2:341700/1‑93 (MQ=255)

                                                          ttACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGc                               <  1:9863816/93‑1 (MQ=255)

                                                          ttACTTCAGTGATATAGCACAATGCACCTTCGCTGCCGATGATGATGTGACGAATGGACGCGCCAGCCGCGCGGAGTGGCACGTTTTTCATGc                               >  1:1677884/1‑93 (MQ=255)

                                                           tACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCg                              >  2:223697/1‑93 (MQ=255)

                                                           tACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCg                              >  2:1993421/1‑93 (MQ=255)

                                                            tcTTCATTGATATACCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCgt                             <  2:8872180/92‑1 (MQ=255)

                                                            aCTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCgt                             >  2:4275220/1‑93 (MQ=255)

                                                            aCTTCAGGGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCgt                             <  2:5960642/93‑1 (MQ=255)

                                                              ttCAGTGATATAGCACAATGCGCCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCgtgt                           <  2:2449543/93‑1 (MQ=255)

                                                              ttCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCgtgt                           <  1:7015427/93‑1 (MQ=255)

                                                                cAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGa                         <  1:2381739/93‑1 (MQ=255)

                                                                cAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGa                         <  1:5003875/93‑1 (MQ=255)

                                                                   tGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACgg                      <  1:7171923/93‑1 (MQ=255)

                                                                   tGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACgg                      <  1:2497718/93‑1 (MQ=255)

                                                                   tGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACgg                      <  2:939805/93‑1 (MQ=255)

                                                                   tGATATAGCACAAGGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACgg                      <  1:8111901/93‑1 (MQ=255)

                                                                    gATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGt                     >  1:7951838/1‑93 (MQ=255)

                                                                     atatAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTg                    >  1:3328775/1‑93 (MQ=255)

                                                                     atatAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTg                    >  1:9586611/1‑93 (MQ=255)

                                                                      tataGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGc                   <  1:6154532/93‑1 (MQ=255)

                                                                      tataGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGc                   >  1:9911523/1‑93 (MQ=255)

                                                                       ataGCACAATGCCCCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGcc                  <  1:8687774/93‑1 (MQ=255)

                                                                       ataGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGcc                  >  2:2323927/1‑93 (MQ=255)

                                                                        taGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCa                 <  1:269466/93‑1 (MQ=255)

                                                                               aTGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCa          <  1:2551136/93‑1 (MQ=255)

                                                                               aTGCACCTCCGTTGCCTATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCa          <  2:8604643/93‑1 (MQ=255)

                                                                                  cACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATa       <  1:9634025/93‑1 (MQ=255)

                                                                                  cACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATa       >  2:7977408/1‑93 (MQ=255)

                                                                                   aCCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAc      >  2:1470347/1‑93 (MQ=255)

                                                                                      ttCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGc   <  2:3089451/93‑1 (MQ=255)

                                                                                      ttCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGc   >  1:2045076/1‑93 (MQ=255)

                                                                                       tCGTTGCCGATGATGATGTGACGAAGGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCt  <  1:4941997/93‑1 (MQ=255)

TCCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑CGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCT  >  NC_000913/2896726‑2896904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 245 total aligned reads displayed.

TCCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑C‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACC  >  NC_000913/2896726‑2896912

TCCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATCGCACAATGCACCTTCGTTG‑C                                                                                                >  SRR4302540.6904518/1‑94 (MQ=60)

TCCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑C                                                                                                >  SRR4302540.4722053/1‑94 (MQ=60)

TCCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑C                                                                                                >  SRR4302540.5710809/1‑94 (MQ=60)

TCCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑C                                                                                                >  SRR4302540.6904517/1‑94 (MQ=60)

TCCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑C                                                                                                >  SRR4302540.2852389/1‑94 (MQ=60)

 CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑C‑C                                                                                              <  SRR4302540.4626468/94‑1 (MQ=60)

 CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑C‑C                                                                                              <  SRR4302540.5647446/94‑1 (MQ=60)

 CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑C‑C                                                                                              >  SRR4302540.2952232/1‑94 (MQ=60)

  CAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑Ccg                                                                                              >  SRR4302540.5046953/1‑92 (MQ=60)

  CAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑Ccg                                                                                              >  SRR4302540.3114235/1‑92 (MQ=60)

  CAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑Ccg                                                                                              >  SRR4302540.3111271/1‑92 (MQ=60)

  CAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑Ccg                                                                                              >  SRR4302540.7181369/1‑92 (MQ=60)

    GGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GAT                                                                                            <  SRR4302540.3294600/94‑1 (MQ=60)

     GATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATG                                                                                           <  SRR4302540.5435963/94‑1 (MQ=60)

      ATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGA                                                                                          >  SRR4302540.5036249/1‑94 (MQ=60)

      ATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGA                                                                                          >  SRR4302540.1190591/1‑94 (MQ=60)

      ATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGA                                                                                          <  SRR4302540.4299349/94‑1 (MQ=60)

      ATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGA                                                                                          >  SRR4302540.3035336/1‑94 (MQ=60)

      ATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGA                                                                                          >  SRR4302540.305667/1‑94 (MQ=60)

       TATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGAT                                                                                         <  SRR4302540.7440647/94‑1 (MQ=60)

       TATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGAT                                                                                         <  SRR4302540.10072298/94‑1 (MQ=60)

       TATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGAT                                                                                         >  SRR4302540.3870382/1‑94 (MQ=60)

         TAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGA                                                                                       >  SRR4302540.9711846/1‑94 (MQ=60)

         TAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGA                                                                                       >  SRR4302540.3629018/1‑94 (MQ=60)

            CCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGT                                                                                    <  SRR4302540.3842876/94‑1 (MQ=60)

             CGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTG                                                                                   <  SRR4302540.6602287/94‑1 (MQ=60)

             CGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTG                                                                                   <  SRR4302540.2699111/94‑1 (MQ=60)

             CGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTG                                                                                   >  SRR4302540.7429133/1‑94 (MQ=60)

              GTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGA                                                                                  >  SRR4302540.4427566/1‑94 (MQ=60)

              GTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGA                                                                                  >  SRR4302540.6897069/1‑94 (MQ=60)

              GTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGA                                                                                  >  SRR4302540.2268707/1‑94 (MQ=60)

               TAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGAC                                                                                 <  SRR4302540.1005090/94‑1 (MQ=60)

               TAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGAC                                                                                 <  SRR4302540.706396/94‑1 (MQ=60)

                AGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCGCTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACG                                                                                >  SRR4302540.4691322/1‑94 (MQ=60)

                 GAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGA                                                                               >  SRR4302540.6305115/1‑94 (MQ=60)

                 GAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGA                                                                               >  SRR4302540.9984378/1‑94 (MQ=60)

                 GAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGA                                                                               >  SRR4302540.3263470/1‑94 (MQ=60)

                   AGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAAT                                                                             <  SRR4302540.3057652/94‑1 (MQ=60)

                   AGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAAT                                                                             >  SRR4302540.2287068/1‑94 (MQ=60)

                   AGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAAT                                                                             <  SRR4302540.4168262/94‑1 (MQ=60)

                   AGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAAT                                                                             <  SRR4302540.3108683/94‑1 (MQ=60)

                   AGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAAT                                                                             <  SRR4302540.9732265/94‑1 (MQ=60)

                   AGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAAT                                                                             >  SRR4302540.9920812/1‑94 (MQ=60)

                    GAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATG                                                                            >  SRR4302540.1048667/1‑94 (MQ=60)

                    GAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATG                                                                            >  SRR4302540.8874876/1‑94 (MQ=60)

                    GAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATG                                                                            >  SRR4302540.1048666/1‑94 (MQ=60)

                     AGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGT                                                                           >  SRR4302540.7026072/1‑94 (MQ=60)

                      GGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTC                                                                          >  SRR4302540.3672822/1‑94 (MQ=60)

                      GGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTC                                                                          <  SRR4302540.3787324/94‑1 (MQ=60)

                       GTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCC                                                                         <  SRR4302540.5527948/94‑1 (MQ=60)

                       GTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCC                                                                         >  SRR4302540.7884082/1‑94 (MQ=60)

                        TTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCG                                                                        <  SRR4302540.2013298/94‑1 (MQ=60)

                        TTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGGTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCG                                                                        <  SRR4302540.2975413/94‑1 (MQ=60)

                         TGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGG                                                                       <  SRR4302540.9343351/94‑1 (MQ=60)

                          GTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGG                                                                      <  SRR4302540.5262968/94‑1 (MQ=60)

                          GTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGG                                                                      <  SRR4302540.4559753/94‑1 (MQ=60)

                               CCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGC                                                                 >  SRR4302540.8732744/1‑94 (MQ=60)

                                CGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCC                                                                >  SRR4302540.9174853/1‑94 (MQ=60)

                                CGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCC                                                                <  SRR4302540.8914146/94‑1 (MQ=60)

                                 GGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCG                                                               <  SRR4302540.3731409/94‑1 (MQ=60)

                                 GGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGCTGCC‑GATGATGATGTGACGAATGTCCGGGACAGCCG                                                               >  SRR4302540.419959/1‑94 (MQ=60)

                                  GGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGC                                                              <  SRR4302540.333921/94‑1 (MQ=60)

                                   GGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCG                                                             >  SRR4302540.10145520/1‑94 (MQ=60)

                                   GGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCG                                                             >  SRR4302540.6307250/1‑94 (MQ=60)

                                    GTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGG                                                            >  SRR4302540.2540457/1‑94 (MQ=60)

                                     TGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCG                                                           <  SRR4302540.1365124/94‑1 (MQ=60)

                                     TGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCG                                                           >  SRR4302540.7202847/1‑94 (MQ=60)

                                     TGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCG                                                           <  SRR4302540.8113442/94‑1 (MQ=60)

                                       AATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGC                                                         >  SRR4302540.6028646/1‑94 (MQ=60)

                                        ATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCG                                                        >  SRR4302540.3075412/1‑94 (MQ=60)

                                        ATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCG                                                        >  SRR4302540.6941117/1‑94 (MQ=60)

                                        ATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCG                                                        >  SRR4302540.4756515/1‑94 (MQ=60)

                                         TTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGT                                                       >  SRR4302540.1686795/1‑94 (MQ=60)

                                          ttaaatattttcactgtgtctccagttatagatgcccatgcagcttgtttgcC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      <  SRR4302540.2206335/42‑1 (MQ=60)

                                          TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      >  SRR4302540.8555137/1‑94 (MQ=60)

                                          TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      >  SRR4302540.7693279/1‑94 (MQ=60)

                                          TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      >  SRR4302540.6636325/1‑94 (MQ=60)

                                          TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      >  SRR4302540.8888725/1‑94 (MQ=60)

                                          TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      >  SRR4302540.3095969/1‑94 (MQ=60)

                                          TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      >  SRR4302540.5927162/1‑94 (MQ=60)

                                          TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      <  SRR4302540.115928/94‑1 (MQ=60)

                                          TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      >  SRR4302540.9149154/1‑94 (MQ=60)

                                          TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      >  SRR4302540.1913448/1‑94 (MQ=60)

                                             AAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCA                                                   <  SRR4302540.1851730/94‑1 (MQ=60)

                                             AAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCA                                                   >  SRR4302540.922750/1‑94 (MQ=60)

                                             AAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCA                                                   <  SRR4302540.1851729/94‑1 (MQ=60)

                                              AGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACTTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGGCAGCCGCGCGGCGGGGCAG                                                  >  SRR4302540.2664161/1‑94 (MQ=60)

                                              AGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCAC                                                  >  SRR4302540.5613830/1‑94 (MQ=60)

                                               GATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACG                                                 >  SRR4302540.6996796/1‑94 (MQ=60)

                                               GATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACG                                                 <  SRR4302540.543791/94‑1 (MQ=60)

                                               AATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACG                                                 <  SRR4302540.543792/94‑1 (MQ=60)

                                                ATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGT                                                >  SRR4302540.6714403/1‑94 (MQ=60)

                                                ATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGT                                                <  SRR4302540.944184/94‑1 (MQ=60)

                                                 TTTTCACGGTTACTTCAGTGATATAGCACAATGCACCTGCGTTGCC‑GATGATTATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTT                                               <  SRR4302540.5270438/94‑1 (MQ=60)

                                                  TTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTT                                              <  SRR4302540.1315401/94‑1 (MQ=60)

                                                   TTCACTGTTACTTCAGTTATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTT                                             <  SRR4302540.8690052/94‑1 (MQ=60)

                                                    TCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTT                                            >  SRR4302540.2856941/1‑94 (MQ=60)

                                                    TCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTT                                            <  SRR4302540.9029988/94‑1 (MQ=60)

                                                     CACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTA                                           >  SRR4302540.5143825/1‑94 (MQ=60)

                                                     CACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTA                                           >  SRR4302540.4006704/1‑94 (MQ=60)

                                                      ACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAA                                          <  SRR4302540.758011/94‑1 (MQ=60)

                                                      ACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAA                                          <  SRR4302540.4055667/94‑1 (MQ=60)

                                                       CTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAT                                         >  SRR4302540.9987851/1‑94 (MQ=60)

                                                       CTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAT                                         <  SRR4302540.8662363/94‑1 (MQ=60)

                                                       CTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAT                                         >  SRR4302540.7730420/1‑94 (MQ=60)

                                                       CTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAT                                         >  SRR4302540.8990590/1‑94 (MQ=60)

                                                       CTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAT                                         <  SRR4302540.6195037/94‑1 (MQ=60)

                                                       CTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAT                                         <  SRR4302540.401715/94‑1 (MQ=60)

                                                       CTGTGACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCTGGCCAGCCGCGCGGCGTGGCACGTTTTTAAT                                         <  SRR4302540.1436589/94‑1 (MQ=60)

                                                        TGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATG                                        >  SRR4302540.8142309/1‑94 (MQ=60)

                                                        TGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATG                                        >  SRR4302540.8306666/1‑94 (MQ=60)

                                                        TGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATG                                        <  SRR4302540.9135397/94‑1 (MQ=60)

                                                        TGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATG                                        <  SRR4302540.2555454/94‑1 (MQ=60)

                                                         tgTACTTCAGTGATAAAGCACAATGCCCCTTCGTTGCC‑GATGATGATGGGACGAATGGCGGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGC                                       <  SRR4302540.2405200/92‑1 (MQ=60)

                                                         GTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGC                                       <  SRR4302540.5265501/94‑1 (MQ=60)

                                                         GTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGC                                       >  SRR4302540.1696442/1‑94 (MQ=60)

                                                         GTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGC                                       >  SRR4302540.315260/1‑94 (MQ=60)

                                                          TTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCG                                      >  SRR4302540.2157773/1‑94 (MQ=60)

                                                          TTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCG                                      <  SRR4302540.7604081/94‑1 (MQ=60)

                                                          TTACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCG                                      <  SRR4302540.9979045/94‑1 (MQ=60)

                                                           TACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGT                                     <  SRR4302540.1638041/94‑1 (MQ=60)

                                                            ACTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTG                                    >  SRR4302540.2242841/1‑94 (MQ=60)

                                                             CTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGT                                   >  SRR4302540.2655343/1‑94 (MQ=60)

                                                             CTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGT                                   >  SRR4302540.1809010/1‑94 (MQ=60)

                                                             CTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGT                                   <  SRR4302540.1913262/94‑1 (MQ=60)

                                                             CTTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGT                                   >  SRR4302540.5058641/1‑94 (MQ=60)

                                                              TTCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTG                                  >  SRR4302540.3044068/1‑94 (MQ=60)

                                                              TTCAGTGATATAGCACAATGCACCTTCGTTG‑CAGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTG                                  <  SRR4302540.7093322/94‑1 (MQ=60)

                                                               TCAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGA                                 >  SRR4302540.5384553/1‑94 (MQ=60)

                                                                CAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGAC                                <  SRR4302540.2407399/94‑1 (MQ=60)

                                                                CAGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGAC                                <  SRR4302540.5058069/94‑1 (MQ=60)

                                                                 AGTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACG                               <  SRR4302540.3428744/94‑1 (MQ=60)

                                                                 AGTGATATAGCACAATGCACATTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACG                               >  SRR4302540.4017643/1‑94 (MQ=60)

                                                                  GTGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGG                              >  SRR4302540.9779918/1‑94 (MQ=60)

                                                                   TGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGT                             >  SRR4302540.8044529/1‑94 (MQ=60)

                                                                   TGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGT                             <  SRR4302540.7251866/94‑1 (MQ=60)

                                                                   TGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGT                             >  SRR4302540.1594561/1‑94 (MQ=60)

                                                                   TGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGT                             <  SRR4302540.2802604/94‑1 (MQ=60)

                                                                   TGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGT                             <  SRR4302540.2524646/94‑1 (MQ=60)

                                                                   TGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGT                             <  SRR4302540.4287543/94‑1 (MQ=60)

                                                                   TGATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGT                             <  SRR4302540.4325693/94‑1 (MQ=60)

                                                                   TGATATAGCACAAGGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGT                             <  SRR4302540.8206051/94‑1 (MQ=60)

                                                                    GATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTG                            >  SRR4302540.9699784/1‑94 (MQ=60)

                                                                    GATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTG                            >  SRR4302540.3365313/1‑94 (MQ=60)

                                                                     ATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGC                           >  SRR4302540.10027288/1‑94 (MQ=60)

                                                                     ATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGC                           <  SRR4302540.1980638/94‑1 (MQ=60)

                                                                     ATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGC                           >  SRR4302540.10027289/1‑94 (MQ=60)

                                                                     ATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGGGC                           >  SRR4302540.3050952/1‑94 (MQ=60)

                                                                     ATATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGCCACGTTTTTAATGCGCGTGACGcggc                           >  SRR4302540.7625037/1‑90 (MQ=60)

                                                                      TATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCC                          >  SRR4302540.2140044/1‑94 (MQ=60)

                                                                      TATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCC                          <  SRR4302540.6223094/94‑1 (MQ=60)

                                                                      TATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGGGCC                          >  SRR4302540.1877334/1‑94 (MQ=60)

                                                                       ATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCA                         <  SRR4302540.5078907/94‑1 (MQ=60)

                                                                       ATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCA                         >  SRR4302540.972840/1‑94 (MQ=60)

                                                                       ATAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCA                         >  SRR4302540.4998249/1‑94 (MQ=60)

                                                                       ATAGCACAATGCACCTTCGTGGCC‑GAGGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCA                         <  SRR4302540.9588437/94‑1 (MQ=60)

                                                                        TAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCAT                        <  SRR4302540.272118/94‑1 (MQ=60)

                                                                        TAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCAT                        <  SRR4302540.3251996/94‑1 (MQ=60)

                                                                        TAGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCAT                        <  SRR4302540.9193557/94‑1 (MQ=60)

                                                                         AGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATC                       <  SRR4302540.4659674/94‑1 (MQ=60)

                                                                         AGCACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATC                       <  SRR4302540.4659673/94‑1 (MQ=60)

                                                                          GCACAATGCGCCTTCGTTGCC‑TATGATGATGTGACGAATGTCCGAGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCA                      <  SRR4302540.5128354/94‑1 (MQ=60)

                                                                           CACAATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAG                     >  SRR4302540.1025504/1‑94 (MQ=60)

                                                                             aaagccccttcgtTTG‑C‑GATGATGATGCGACGAATGTCCGGGCCAGCCGCTCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCA                  <  SRR4302540.5830842/81‑1 (MQ=60)

                                                                               ATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAA                 <  SRR4302540.9968683/94‑1 (MQ=60)

                                                                               ATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAA                 >  SRR4302540.710676/1‑94 (MQ=60)

                                                                               ATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAA                 <  SRR4302540.2578635/94‑1 (MQ=60)

                                                                               ATGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAA                 <  SRR4302540.2772554/94‑1 (MQ=60)

                                                                                TGCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAAA                >  SRR4302540.7491240/1‑94 (MQ=60)

                                                                                 GCACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATA               >  SRR4302540.3389001/1‑94 (MQ=60)

                                                                                  GACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGTCCAGCCGCCCGGCGTGCCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAC              <  SRR4302540.448425/94‑1 (MQ=60)

                                                                                  CACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAC              <  SRR4302540.8594315/94‑1 (MQ=60)

                                                                                  CACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAC              <  SRR4302540.2481148/94‑1 (MQ=60)

                                                                                  CACCTTCGTCGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAC              <  SRR4302540.6209255/94‑1 (MQ=60)

                                                                                   CCCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACT             <  SRR4302540.8760516/94‑1 (MQ=60)

                                                                                   ACCTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACT             <  SRR4302540.2479085/94‑1 (MQ=60)

                                                                                     CTTCGTTGCC‑GATGATGATGTGACTAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGC           <  SRR4302540.4031889/94‑1 (MQ=60)

                                                                                     CTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGC           <  SRR4302540.2746157/94‑1 (MQ=60)

                                                                                     CTTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGC           >  SRR4302540.2067106/1‑94 (MQ=60)

                                                                                      TTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCT          >  SRR4302540.1011870/1‑94 (MQ=60)

                                                                                      TTCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCT          <  SRR4302540.7343818/94‑1 (MQ=60)

                                                                                       TCGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTT         <  SRR4302540.1554762/94‑1 (MQ=60)

                                                                                       TCGTTGCC‑GATGATGATGTGACGAAGGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTT         <  SRR4302540.4995328/94‑1 (MQ=60)

                                                                                        CGTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGGCAATACTGCTTC        >  SRR4302540.329431/1‑94 (MQ=60)

                                                                                         GTTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCC       >  SRR4302540.7130354/1‑94 (MQ=60)

                                                                                          TTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCCATACTGCTTTCA      >  SRR4302540.3794094/1‑94 (MQ=60)

                                                                                          TTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCA      <  SRR4302540.5213686/94‑1 (MQ=60)

                                                                                          TTGCC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCA      <  SRR4302540.1923729/94‑1 (MQ=60)

                                                                                           tgcC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAG     >  SRR4302540.8894577/4‑94 (MQ=60)

                                                                                           tgcC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAG     >  SRR4302540.9817683/4‑94 (MQ=60)

                                                                                           tgcC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAG     <  SRR4302540.9780083/91‑1 (MQ=60)

                                                                                           tgcC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAG     <  SRR4302540.5924107/91‑1 (MQ=60)

                                                                                           tgcC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAG     >  SRR4302540.3640547/4‑94 (MQ=60)

                                                                                           tgcC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAG     <  SRR4302540.1768508/91‑1 (MQ=60)

                                                                                            gcC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGA    >  SRR4302540.2345916/3‑94 (MQ=60)

                                                                                            gcC‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGA    <  SRR4302540.7045704/92‑1 (MQ=60)

                                                                                            C‑C‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGAC   <  SRR4302540.6757513/94‑1 (MQ=60)

                                                                                              C‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACC  >  SRR4302540.8520497/1‑94 (MQ=60)

                                                                                              C‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACC  >  SRR4302540.5523815/1‑94 (MQ=60)

                                                                                              C‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACA  >  SRR4302540.2335317/1‑94 (MQ=60)

TCCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑C‑GATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACC  >  NC_000913/2896726‑2896912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`