Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,900,198 G→A G94D (GGC→GAC)  ygcE → putative kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,900,1980GA99.2% 1386.8 / ‑3.5 396G94D (GGC→GAC) ygcEputative kinase
Reads supporting (aligned to +/- strand):  ref base G (3/0);  new base A (204/188);  total (207/189)
Fisher's exact test for biased strand distribution p-value = 2.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.54e-01

Only 100 of 426 total aligned reads displayed.

TGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCT  >  NC_000913/2900108‑2900287
                                                                                          |                                                                                         
tgatgaGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACa                                                                                         <  2:6889470/93‑1 (MQ=255)
tgatgaGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACa                                                                                         >  1:962961/1‑93 (MQ=255)
 gatgaGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGacac                                                                                        <  2:8027300/93‑1 (MQ=255)
   tgaGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGc                                                                                      <  2:2346326/93‑1 (MQ=255)
     aGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGGCACGCct                                                                                    >  2:2671214/1‑93 (MQ=255)
     aGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCct                                                                                    <  1:590255/93‑1 (MQ=255)
       tCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCctgc                                                                                  <  1:1996414/93‑1 (MQ=255)
       tCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCctgc                                                                                  >  2:8562282/1‑93 (MQ=255)
         aGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACCActgctc                                                                                >  1:1501195/1‑92 (MQ=255)
          gTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCtgctgc                                                                               >  1:1163638/1‑93 (MQ=255)
              gCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCg                                                                           >  1:6495438/1‑93 (MQ=255)
              gCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTAAAAGCCGATGACACGCCTGCTGCGCCg                                                                           >  2:4661020/1‑93 (MQ=255)
                  ggAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTgt                                                                       >  1:2669577/1‑92 (MQ=255)
                  ggAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGa                                                                       >  1:6852663/1‑93 (MQ=255)
                  ggAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGa                                                                       >  1:3752432/1‑93 (MQ=255)
                    aaTAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGAtt                                                                     <  2:828485/93‑1 (MQ=255)
                     aTAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTa                                                                    >  2:1048841/1‑93 (MQ=255)
                       aaaGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGc                                                                  >  1:7830498/1‑93 (MQ=255)
                        aagaagATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCt                                                                 >  1:6639573/1‑93 (MQ=255)
                         agaagaTATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTg                                                                <  2:1945733/93‑1 (MQ=255)
                         agaagaTATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTg                                                                >  2:1833570/1‑93 (MQ=255)
                         agaagaTATTGTCGGTATTGGTCTGGGATCCATACGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTACTGCGCCGTTGATTAGCTg                                                                <  1:8967628/93‑1 (MQ=255)
                          gaagaTATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTgg                                                               >  2:736411/1‑93 (MQ=255)
                          gaagaTATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACACCAGCTGGGCCGTTGATTAGCTgg                                                               >  1:1663007/1‑93 (MQ=255)
                            agaTATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCa                                                             >  2:3302158/1‑93 (MQ=255)
                             gaTATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAg                                                            <  1:1225165/93‑1 (MQ=255)
                             gaTATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAg                                                            >  2:7109788/1‑93 (MQ=255)
                               tatTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGa                                                          <  2:3182885/93‑1 (MQ=255)
                               tatTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGa                                                          >  2:4882064/1‑93 (MQ=255)
                               tatTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGa                                                          <  2:6621235/93‑1 (MQ=255)
                                 ttGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATg                                                        <  1:7579084/93‑1 (MQ=255)
                                 ttGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATg                                                        >  2:2992358/1‑93 (MQ=255)
                                 ttGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATg                                                        <  1:4888622/93‑1 (MQ=255)
                                   gTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCa                                                      <  1:6183475/93‑1 (MQ=255)
                                   gTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCa                                                      <  1:4040048/93‑1 (MQ=255)
                                   gTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCa                                                      >  2:8759001/1‑93 (MQ=255)
                                   gTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCa                                                      <  2:2052686/93‑1 (MQ=255)
                                      ggTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCAcgc                                                   >  1:4236337/1‑93 (MQ=255)
                                       gTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCAcgcg                                                  <  2:1718392/93‑1 (MQ=255)
                                          ttGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTa                                               >  1:7149644/1‑93 (MQ=255)
                                          ttGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTa                                               <  2:786395/93‑1 (MQ=255)
                                            ggTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTaca                                             >  2:5254772/1‑93 (MQ=255)
                                                tGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGcc                                         >  1:2894460/1‑93 (MQ=255)
                                                  ggATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCt                                       >  1:5713980/1‑93 (MQ=255)
                                                   gATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCtt                                      >  1:9481283/1‑93 (MQ=255)
                                                    atccatccGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTa                                     <  1:8394469/93‑1 (MQ=255)
                                                    atccatccGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTa                                     >  2:2501961/1‑93 (MQ=255)
                                                    atccatccGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTa                                     <  2:7700716/93‑1 (MQ=255)
                                                     tccatccGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTAc                                    <  1:1398807/93‑1 (MQ=255)
                                                      ccatccGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACg                                   >  1:7696723/1‑93 (MQ=255)
                                                        atccGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTCCACGCCCTTACGaa                                 <  2:821997/93‑1 (MQ=255)
                                                        atccGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGaa                                 <  1:7494877/93‑1 (MQ=255)
                                                         tccGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCCCGCGTTACACGCCCTTACGAac                                >  2:1754456/1‑93 (MQ=255)
                                                         tccGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAac                                >  1:9135850/1‑93 (MQ=255)
                                                         tccGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAac                                >  2:561233/1‑93 (MQ=255)
                                                           cGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGCacac                              >  2:3572256/1‑93 (MQ=255)
                                                             ttGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAacacac                            <  2:3814899/93‑1 (MQ=255)
                                                             ttGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAacacac                            <  1:8461424/93‑1 (MQ=255)
                                                             ttGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAacacac                            >  1:1713546/1‑93 (MQ=255)
                                                             ttGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAacacac                            >  1:4578480/1‑93 (MQ=255)
                                                              tgctgcCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACt                           <  1:9947408/93‑1 (MQ=255)
                                                              tgctgcCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACt                           >  2:1378633/1‑93 (MQ=255)
                                                              tgctgcCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACt                           <  2:4040670/93‑1 (MQ=255)
                                                              tgctgcCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACt                           <  1:4452016/93‑1 (MQ=255)
                                                                ctgcCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTaa                         <  1:3367693/93‑1 (MQ=255)
                                                                 tgcCGTGCGTTATTGAAAGCCGATGACACGCCTGCTTCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAAc                        <  2:7446614/93‑1 (MQ=255)
                                                                  gcCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAAcc                       <  1:10014694/93‑1 (MQ=255)
                                                                  gcCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGCTACACGCCCTTACGAACACACTAAcc                       >  1:5374833/1‑93 (MQ=255)
                                                                   ccGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAAccc                      <  1:8585474/93‑1 (MQ=255)
                                                                   ccGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAAccc                      <  1:3107547/93‑1 (MQ=255)
                                                                   ccGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAAccc                      <  2:47235/93‑1 (MQ=255)
                                                                    cGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCt                     <  1:9762902/93‑1 (MQ=255)
                                                                     gTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTg                    <  2:5796838/93‑1 (MQ=255)
                                                                     gTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTg                    >  1:390480/1‑93 (MQ=255)
                                                                      tccGTGATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTAACACGCCCTTACGAAGACACGATCCCTGa                   <  2:6219601/91‑1 (MQ=255)
                                                                      tGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGa                   >  1:5279593/1‑93 (MQ=255)
                                                                      tGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGa                   <  1:7102024/93‑1 (MQ=255)
                                                                      tGCGTTATTGAAAGCCGATGACACGCCTGCTGCGACGTTGATTAGCTGGCGGGATGCACGCGTTACGGGCCCTTACGAACACACTACCCCttt                   >  1:3537857/1‑91 (MQ=255)
                                                                       gCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGAc                  <  1:5783005/93‑1 (MQ=255)
                                                                        cGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACg                 <  2:4238617/93‑1 (MQ=255)
                                                                        agTTATAGAACGCCGATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACTCACTAACCCAGACg                 <  2:9210965/92‑1 (MQ=255)
                                                                         gTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGt                <  1:2471002/93‑1 (MQ=255)
                                                                          ttATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTg               <  2:1221744/93‑1 (MQ=255)
                                                                          ttATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTg               <  1:8796731/93‑1 (MQ=255)
                                                                          ttATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTg               >  2:6312245/1‑93 (MQ=255)
                                                                            aTTGAAAGCCGATGACACGCCTGCTGTGCAGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGc             <  2:9707531/93‑1 (MQ=255)
                                                                            aTTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATCCACGAGTTACACGCCCTTACGCACACACTAACGCTGATGTGGc             >  1:5009522/1‑93 (MQ=255)
                                                                             ttGAAAGCCGATGACACGCCTGCTGCGCCGTTTATTAGCTGGCAGGGTGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCa            >  2:2839930/1‑93 (MQ=255)
                                                                             ttGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCa            >  1:6343400/1‑93 (MQ=255)
                                                                               gAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCata          >  2:6007252/1‑93 (MQ=255)
                                                                               gAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCata          <  2:7593397/93‑1 (MQ=255)
                                                                                aaaGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCatat         >  1:7004636/1‑93 (MQ=255)
                                                                                aaaGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCatat         <  1:5526039/93‑1 (MQ=255)
                                                                                 aaGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATg        <  1:8048031/93‑1 (MQ=255)
                                                                                  aGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGt       <  1:2839013/93‑1 (MQ=255)
                                                                                    ccGATGACGCGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCa     <  1:2493194/93‑1 (MQ=255)
                                                                                    ccGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCa     <  1:9383295/93‑1 (MQ=255)
                                                                                     cGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCAc    >  2:9087894/1‑93 (MQ=255)
                                                                                      gATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCAcc   >  2:4461823/1‑93 (MQ=255)
                                                                                      gATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCAcc   >  1:5096298/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCT  >  NC_000913/2900108‑2900287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 250 total aligned reads displayed.
ATTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTT  >  NC_000913/2900105‑2900291
                                                                                             |                                                                                             
ATTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGA                                                                                               <  SRR4302540.9286892/94‑1 (MQ=60)
 TTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCTGTGCGTTATTGAAAGCCGATGAC                                                                                              <  SRR4302540.9188068/94‑1 (MQ=60)
 TTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGAC                                                                                              <  SRR4302540.9112708/94‑1 (MQ=60)
 TTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGAC                                                                                              >  SRR4302540.1606264/1‑94 (MQ=60)
 TTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGAC                                                                                              >  SRR4302540.3533184/1‑94 (MQ=60)
 TTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGAC                                                                                              <  SRR4302540.6603766/94‑1 (MQ=60)
 TTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGAC                                                                                              >  SRR4302540.6725228/1‑94 (MQ=60)
 TTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGAC                                                                                              <  SRR4302540.3390743/94‑1 (MQ=60)
  TTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACA                                                                                             <  SRR4302540.6050177/94‑1 (MQ=60)
  TTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACA                                                                                             >  SRR4302540.972912/1‑94 (MQ=60)
   TGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACAC                                                                                            <  SRR4302540.9102248/94‑1 (MQ=60)
   TGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACAC                                                                                            >  SRR4302540.723/1‑94 (MQ=60)
   TGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACAC                                                                                            <  SRR4302540.2026472/94‑1 (MQ=60)
   TGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACAC                                                                                            <  SRR4302540.10024848/94‑1 (MQ=60)
    GATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACG                                                                                           <  SRR4302540.5309160/94‑1 (MQ=60)
     ATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGC                                                                                          >  SRR4302540.7643794/1‑94 (MQ=60)
       GAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCT                                                                                        <  SRR4302540.2902247/94‑1 (MQ=60)
       GAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCT                                                                                        <  SRR4302540.2303389/94‑1 (MQ=60)
       GAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCT                                                                                        <  SRR4302540.5346047/94‑1 (MQ=60)
        AGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAACGCCGATGACACGCCTG                                                                                       >  SRR4302540.47712/1‑94 (MQ=60)
        AGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTG                                                                                       >  SRR4302540.47713/1‑94 (MQ=60)
        AGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTG                                                                                       <  SRR4302540.9684830/94‑1 (MQ=60)
        AGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTG                                                                                       <  SRR4302540.596617/94‑1 (MQ=60)
         GTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGC                                                                                      >  SRR4302540.9584900/1‑94 (MQ=60)
         GTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGC                                                                                      <  SRR4302540.8603839/94‑1 (MQ=60)
          TCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCT                                                                                     <  SRR4302540.9501194/94‑1 (MQ=60)
          TCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCT                                                                                     <  SRR4302540.2018044/94‑1 (MQ=60)
           CAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTG                                                                                    <  SRR4302540.3943480/94‑1 (MQ=60)
           CAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTG                                                                                    >  SRR4302540.1517738/1‑94 (MQ=60)
            AGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGC                                                                                   <  SRR4302540.7056541/94‑1 (MQ=60)
            AGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGC                                                                                   >  SRR4302540.1175716/1‑94 (MQ=60)
             GTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCG                                                                                  <  SRR4302540.551193/94‑1 (MQ=60)
                TGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCG                                                                               >  SRR4302540.1151439/1‑94 (MQ=60)
                 GCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGT                                                                              >  SRR4302540.7632557/1‑94 (MQ=60)
                 GCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGT                                                                              >  SRR4302540.1059301/1‑94 (MQ=60)
                  CCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGTATCCATCCGTTGCTGCCGTGCGTTATTAAAAGCCGATGACACGCCTGCgccgccgtg                                                                             >  SRR4302540.2922992/1‑85 (MQ=60)
                  CCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTT                                                                             >  SRR4302540.2922991/1‑94 (MQ=60)
                   CGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTG                                                                            <  SRR4302540.2504609/94‑1 (MQ=60)
                   CGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTG                                                                            <  SRR4302540.2504876/94‑1 (MQ=60)
                   CGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTG                                                                            >  SRR4302540.6941295/1‑94 (MQ=60)
                    GGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGA                                                                           >  SRR4302540.6928572/1‑94 (MQ=60)
                    GGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGA                                                                           >  SRR4302540.3793371/1‑94 (MQ=60)
                    GGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGA                                                                           >  SRR4302540.9814953/1‑94 (MQ=60)
                     GGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATGCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGGTGAT                                                                          >  SRR4302540.4517906/1‑94 (MQ=60)
                     GGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGAT                                                                          >  SRR4302540.2616726/1‑94 (MQ=60)
                     GGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGACGACACGCCTGCTGCGCCGTTGAT                                                                          <  SRR4302540.3111754/94‑1 (MQ=60)
                      GAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATT                                                                         <  SRR4302540.6048223/94‑1 (MQ=60)
                       AATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGGTGATTA                                                                        >  SRR4302540.1700632/1‑94 (MQ=60)
                       AATAAAGAAGATATTGTCGGGATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTA                                                                        >  SRR4302540.9517590/1‑94 (MQ=60)
                        ATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAG                                                                       >  SRR4302540.7212732/1‑94 (MQ=60)
                        ATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAG                                                                       <  SRR4302540.9850252/94‑1 (MQ=60)
                        ATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAG                                                                       >  SRR4302540.8494243/1‑94 (MQ=60)
                         TAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGC                                                                      >  SRR4302540.7921993/1‑94 (MQ=60)
                         TAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGC                                                                      <  SRR4302540.9323709/94‑1 (MQ=60)
                          AAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGACGATGACACGCCTGCTGCGCCGTTGATTAGCT                                                                     >  SRR4302540.4057719/1‑94 (MQ=60)
                          AAAGAAGATATTGTCGGTATTGGTCTGCGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACCCGCCTGCTGCGCCGTTGATTAGCT                                                                     <  SRR4302540.1099016/94‑1 (MQ=60)
                           AATAAGATATTTGCGGTATGGGTCTGGGATGCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTG                                                                    <  SRR4302540.1745622/94‑1 (MQ=60)
                           AAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTG                                                                    >  SRR4302540.7354072/1‑94 (MQ=60)
                            AGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGG                                                                   >  SRR4302540.9419657/1‑94 (MQ=60)
                            AGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGG                                                                   >  SRR4302540.6831774/1‑94 (MQ=60)
                            AGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACACCAGCTGGGCCGTTGATTAGCTGG                                                                   >  SRR4302540.1681115/1‑94 (MQ=60)
                            AGAAGATATTGTCGGTATTGGTCTGGGATCCATACGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTACTGCGCCGTTGATTAGCTGG                                                                   <  SRR4302540.9073964/94‑1 (MQ=60)
                             GAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGC                                                                  <  SRR4302540.5132265/94‑1 (MQ=60)
                              AAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCG                                                                 >  SRR4302540.779796/1‑94 (MQ=60)
                               AGATATTGTGGGTATTGGTCTGGGTTTCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGGCACGCCTGCTGCGCCGgtgtttagttggcgg                                                                >  SRR4302540.3670608/1‑79 (MQ=60)
                               AGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAG                                                                >  SRR4302540.342068/1‑94 (MQ=60)
                               AGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAG                                                                <  SRR4302540.5841612/94‑1 (MQ=60)
                                GATATTGTGGGTATTGGTGTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACCCGCCTGCTGCGCCGTTGATTAGCTGGCAGG                                                               <  SRR4302540.1507736/94‑1 (MQ=60)
                                GATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGG                                                               <  SRR4302540.1507737/94‑1 (MQ=60)
                                GATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGG                                                               <  SRR4302540.1237692/94‑1 (MQ=60)
                                  TATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGAT                                                             <  SRR4302540.8678070/94‑1 (MQ=60)
                                  TATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGAT                                                             <  SRR4302540.7848112/94‑1 (MQ=60)
                                   ATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATG                                                            >  SRR4302540.6645945/1‑94 (MQ=60)
                                    TTGTCGGTGTTGTGCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGC                                                           <  SRR4302540.7664139/94‑1 (MQ=60)
                                    TTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGC                                                           <  SRR4302540.7664137/94‑1 (MQ=60)
                                    TTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGC                                                           <  SRR4302540.4941162/94‑1 (MQ=60)
                                     TGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCA                                                          >  SRR4302540.549200/1‑94 (MQ=60)
                                      GTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCAC                                                         <  SRR4302540.4083601/94‑1 (MQ=60)
                                      GTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCAC                                                         <  SRR4302540.6252347/94‑1 (MQ=60)
                                      GTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCAC                                                         <  SRR4302540.6583837/94‑1 (MQ=60)
                                       TCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACG                                                        <  SRR4302540.338730/94‑1 (MQ=60)
                                       TCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACG                                                        <  SRR4302540.6352985/94‑1 (MQ=60)
                                        CGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGC                                                       >  SRR4302540.4282433/1‑94 (MQ=60)
                                         GGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCG                                                      >  SRR4302540.9638172/1‑94 (MQ=60)
                                         GGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCG                                                      >  SRR4302540.9116931/1‑94 (MQ=60)
                                         GGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTAAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCG                                                      >  SRR4302540.4197376/1‑94 (MQ=60)
                                          GTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGT                                                     >  SRR4302540.4501924/1‑94 (MQ=60)
                                          GTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGT                                                     >  SRR4302540.2857198/1‑94 (MQ=60)
                                          GTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGT                                                     >  SRR4302540.2783938/1‑94 (MQ=60)
                                           TATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTT                                                    >  SRR4302540.5767784/1‑94 (MQ=60)
                                            ATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTA                                                   >  SRR4302540.4370751/1‑94 (MQ=60)
                                            ATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTA                                                   >  SRR4302540.7229319/1‑94 (MQ=60)
                                              TGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACA                                                 <  SRR4302540.1682375/94‑1 (MQ=60)
                                               GGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACAC                                                >  SRR4302540.7484851/1‑94 (MQ=60)
                                               GGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACAC                                                <  SRR4302540.550240/94‑1 (MQ=60)
                                               GGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACAC                                                <  SRR4302540.6721869/94‑1 (MQ=60)
                                                  CTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCC                                             >  SRR4302540.2926022/1‑94 (MQ=60)
                                                  CTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCC                                             >  SRR4302540.686150/1‑94 (MQ=60)
                                                  CTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCC                                             >  SRR4302540.9451620/1‑94 (MQ=60)
                                                  CTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCC                                             >  SRR4302540.4108819/1‑94 (MQ=60)
                                                   TGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCC                                            >  SRR4302540.10036982/1‑94 (MQ=60)
                                                    GGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCT                                           >  SRR4302540.7103114/1‑94 (MQ=60)
                                                    GGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCT                                           >  SRR4302540.5776878/1‑94 (MQ=60)
                                                     GGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTT                                          >  SRR4302540.7219095/1‑94 (MQ=60)
                                                      GATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTTCGGCGCCGTTGATCACCTGGCAGGGTGCACCGTTTACACGCCCTTC                                         >  SRR4302540.1231402/1‑94 (MQ=50)
                                                       ATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTAC                                        <  SRR4302540.8491883/94‑1 (MQ=60)
                                                       ATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTAC                                        <  SRR4302540.8150093/94‑1 (MQ=60)
                                                       ATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTAC                                        <  SRR4302540.1386857/94‑1 (MQ=60)
                                                        TCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACG                                       <  SRR4302540.1413831/94‑1 (MQ=60)
                                                        TCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACG                                       >  SRR4302540.6693265/1‑94 (MQ=60)
                                                        TCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACG                                       >  SRR4302540.7784466/1‑94 (MQ=60)
                                                        TCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACG                                       <  SRR4302540.3872773/94‑1 (MQ=60)
                                                         CCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGA                                      >  SRR4302540.4338082/1‑94 (MQ=60)
                                                         CCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGA                                      >  SRR4302540.5122730/1‑94 (MQ=60)
                                                           ATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATTACACGCCTGCTGCGCCGTTGATTAGATGGCAGGATGCACGCGTTACACGCCCTTACGAAC                                    >  SRR4302540.6282680/1‑94 (MQ=60)
                                                           ATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAAC                                    >  SRR4302540.9245634/1‑94 (MQ=60)
                                                           ATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAAC                                    >  SRR4302540.8352024/1‑94 (MQ=60)
                                                           ATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAAC                                    <  SRR4302540.7578589/94‑1 (MQ=60)
                                                           ATCCGTTGCTGCCGTGCGTTAATGAAAGCCGATGACCCGCCTGCTGCGCCGTTGCTTAGCTTGCAGGATGCACGCGATACACACCCTTACGAAC                                    >  SRR4302540.1213985/1‑94 (MQ=60)
                                                             CCGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACAC                                  <  SRR4302540.2426785/94‑1 (MQ=60)
                                                              CGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACA                                 <  SRR4302540.6438801/94‑1 (MQ=60)
                                                              CGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACA                                 >  SRR4302540.1774625/1‑94 (MQ=60)
                                                              CGTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACA                                 >  SRR4302540.5272187/1‑94 (MQ=60)
                                                               GTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACAC                                <  SRR4302540.8811758/94‑1 (MQ=60)
                                                               GTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACAC                                >  SRR4302540.5716872/1‑94 (MQ=60)
                                                               GTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACAC                                >  SRR4302540.8849901/1‑94 (MQ=60)
                                                               GTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACAC                                >  SRR4302540.8957899/1‑94 (MQ=60)
                                                               GTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACAC                                >  SRR4302540.1732058/1‑94 (MQ=60)
                                                               GTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACAC                                >  SRR4302540.8052238/1‑94 (MQ=60)
                                                               GTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACAC                                >  SRR4302540.6948797/1‑94 (MQ=60)
                                                               GTTGCTGCCGTGCGTTACTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACAC                                <  SRR4302540.8811757/94‑1 (MQ=60)
                                                               CTTGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACAC                                <  SRR4302540.4542062/94‑1 (MQ=60)
                                                                 TGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTA                              <  SRR4302540.4500276/94‑1 (MQ=60)
                                                                 TGCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTA                              <  SRR4302540.10063559/94‑1 (MQ=60)
                                                                  GCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCCGGATGCACGCGTTACACGCCCTTACGCACACACTAA                             >  SRR4302540.5702666/1‑94 (MQ=60)
                                                                  GCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAC                             >  SRR4302540.5702665/1‑94 (MQ=60)
                                                                  GCTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAA                             <  SRR4302540.2740734/94‑1 (MQ=60)
                                                                   CTGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAAC                            <  SRR4302540.3404529/94‑1 (MQ=60)
                                                                    TGCCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGCTACACGCCCTTACGAACACACTAACC                           >  SRR4302540.5433928/1‑94 (MQ=60)
                                                                      CCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCT                         <  SRR4302540.3123477/94‑1 (MQ=60)
                                                                      CCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCT                         <  SRR4302540.3141560/94‑1 (MQ=60)
                                                                      CCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCT                         <  SRR4302540.8685281/94‑1 (MQ=60)
                                                                      CCGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCT                         >  SRR4302540.9890209/1‑94 (MQ=60)
                                                                      CCGTGCGTTATTGAAACCCGATGACAGGCCTCCTGCACCGTTGA‑TAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTG                        <  SRR4302540.4007535/94‑1 (MQ=60)
                                                                       CGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTG                        >  SRR4302540.394514/1‑94 (MQ=60)
                                                                       CGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTG                        <  SRR4302540.9877405/94‑1 (MQ=60)
                                                                       CGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTG                        <  SRR4302540.5811400/94‑1 (MQ=60)
                                                                       CGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTG                        <  SRR4302540.6432590/94‑1 (MQ=60)
                                                                       CGTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTG                        >  SRR4302540.7947770/1‑94 (MQ=60)
                                                                        GTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGA                       >  SRR4302540.3576487/1‑94 (MQ=60)
                                                                        GTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGA                       <  SRR4302540.1204316/94‑1 (MQ=60)
                                                                        GTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGA                       >  SRR4302540.2038129/1‑94 (MQ=60)
                                                                        GTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGA                       >  SRR4302540.5337258/1‑94 (MQ=60)
                                                                        GTGCGTTATTGAAAGCCGATGACACGCCTGCTGCGACGTTGATTAGCTGGCGGGATGCACGCGTTACGGGCCCTTACGAACACACTAccccttt                       >  SRR4302540.3576486/1‑87 (MQ=60)
                                                                         TGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGAC                      <  SRR4302540.7181043/94‑1 (MQ=60)
                                                                         TGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGAC                      <  SRR4302540.3147918/94‑1 (MQ=60)
                                                                         TGCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGAC                      >  SRR4302540.8102115/1‑94 (MQ=60)
                                                                         TGCGTTAGTGAAAGCCGATGACACGCCTGCGGCGCCGTTGATTAGCGGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGAC                      <  SRR4302540.5089807/94‑1 (MQ=60)
                                                                          GCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACG                     <  SRR4302540.5846886/94‑1 (MQ=60)
                                                                          GCGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACG                     <  SRR4302540.5397347/94‑1 (MQ=60)
                                                                           CGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGT                    <  SRR4302540.1513186/94‑1 (MQ=60)
                                                                           CGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGT                    >  SRR4302540.6484114/1‑94 (MQ=60)
                                                                           CGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGT                    >  SRR4302540.8538131/1‑94 (MQ=60)
                                                                           CGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGG                    >  SRR4302540.1622089/1‑94 (MQ=60)
                                                                           CGTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACCCGTTACACGCCCTTCCGAACACAatacccctgaatg                    >  SRR4302540.8538132/1‑81 (MQ=60)
                                                                            GTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTG                   >  SRR4302540.5877779/1‑94 (MQ=60)
                                                                            GTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTG                   >  SRR4302540.9661918/1‑94 (MQ=60)
                                                                            GTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTG                   <  SRR4302540.2497605/94‑1 (MQ=60)
                                                                            GTTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTG                   >  SRR4302540.3692781/1‑94 (MQ=60)
                                                                             TTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGG                  <  SRR4302540.8898451/94‑1 (MQ=60)
                                                                             TTATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGG                  <  SRR4302540.7671368/94‑1 (MQ=60)
                                                                              TATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATCCACGAGTTACACGCCCTTACGCACACACTAACGCTGATGTGGC                 >  SRR4302540.5063767/1‑94 (MQ=60)
                                                                               ATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCA                >  SRR4302540.6414039/1‑94 (MQ=60)
                                                                               ATTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCA                <  SRR4302540.1246433/94‑1 (MQ=60)
                                                                                TTGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCAT               >  SRR4302540.8586956/1‑94 (MQ=60)
                                                                                 TGAAAGGCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATA              <  SRR4302540.3555034/94‑1 (MQ=60)
                                                                                 TGAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATA              <  SRR4302540.4319270/94‑1 (MQ=60)
                                                                                  GAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATAT             <  SRR4302540.253191/94‑1 (MQ=60)
                                                                                  GAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATAT             <  SRR4302540.5876038/94‑1 (MQ=60)
                                                                                  GAAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGAGGCACGCGTTACACGCCCTGACGAACACACTACCCCTGACGTGGCATAT             <  SRR4302540.253189/94‑1 (MQ=60)
                                                                                   AACGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATG            <  SRR4302540.6139022/94‑1 (MQ=60)
                                                                                   AAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATG            <  SRR4302540.5586896/94‑1 (MQ=60)
                                                                                   AAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATG            <  SRR4302540.8019277/94‑1 (MQ=60)
                                                                                   AAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATG            <  SRR4302540.5050054/94‑1 (MQ=60)
                                                                                   AAAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATG            <  SRR4302540.5023763/94‑1 (MQ=60)
                                                                                    AAGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGT           <  SRR4302540.8141520/94‑1 (MQ=60)
                                                                                     AGCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTC          <  SRR4302540.2869723/94‑1 (MQ=60)
                                                                                      GCCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCA         <  SRR4302540.6124374/94‑1 (MQ=60)
                                                                                       CCGATGACGCGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCAC        <  SRR4302540.2520056/94‑1 (MQ=60)
                                                                                       CCGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCAC        <  SRR4302540.4708734/94‑1 (MQ=60)
                                                                                        CGATGACACGCGTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACC       <  SRR4302540.9000500/94‑1 (MQ=60)
                                                                                        CGATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACC       >  SRR4302540.5151443/1‑94 (MQ=60)
                                                                                         GATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCT      <  SRR4302540.7115369/94‑1 (MQ=60)
                                                                                          ATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTC     <  SRR4302540.7116542/94‑1 (MQ=60)
                                                                                          ATGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGGTACACGCCCTTACGACCACACTAACCCTGACGTGGCATATGTCACCTC     >  SRR4302540.4232904/1‑94 (MQ=60)
                                                                                           TGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCT    <  SRR4302540.1379474/94‑1 (MQ=60)
                                                                                           TGACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCT    <  SRR4302540.10069043/94‑1 (MQ=60)
                                                                                            GACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCTT   >  SRR4302540.9528627/1‑94 (MQ=60)
                                                                                             ACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTT  >  SRR4302540.7920573/1‑94 (MQ=60)
                                                                                             ACACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTT  >  SRR4302540.5169313/1‑94 (MQ=60)
                                                                                             |                                                                                             
ATTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTT  >  NC_000913/2900105‑2900291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑