Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,902,688 A→G intergenic (+1292/+81) ygcE → / ← ygcF putative kinase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,902,6880AG99.7% 1184.7 / ‑5.4 367intergenic (+1292/+81)ygcE/ygcFputative kinase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (235/129);  total (237/130)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01

Only 100 of 378 total aligned reads displayed.

TACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGAGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAAT  >  NC_000913/2902598‑2902777
                                                                                          |                                                                                         
   cGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGtttt                                                                                      <  2:6867199/93‑1 (MQ=255)
   cGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGtttt                                                                                      >  2:5059714/1‑93 (MQ=255)
    gCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTc                                                                                     >  1:6846018/1‑93 (MQ=255)
    gCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTc                                                                                     >  1:757627/1‑93 (MQ=255)
    gCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTc                                                                                     >  2:2076465/1‑93 (MQ=255)
     cAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCa                                                                                    <  2:6416211/93‑1 (MQ=255)
     cAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCa                                                                                    >  1:4250635/1‑93 (MQ=255)
      aataatTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCag                                                                                   >  1:9832179/1‑93 (MQ=255)
      aataatTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCag                                                                                   <  2:9141505/93‑1 (MQ=255)
       ataatTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCaga                                                                                  >  1:4973872/1‑93 (MQ=255)
       ataatTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCaga                                                                                  >  2:2747646/1‑93 (MQ=255)
          atTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGc                                                                               >  1:8102185/1‑93 (MQ=255)
           ttttCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCg                                                                              >  2:5633630/1‑93 (MQ=255)
           ttttCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCg                                                                              >  1:1724791/1‑93 (MQ=255)
           ttttCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAG‑CCTTGATGGGTAAAATGGAGGGGTTTTCCGAGGCGa                                                                             >  2:1690408/1‑93 (MQ=255)
               cACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaa                                                                          >  2:9230196/1‑93 (MQ=255)
               cACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaa                                                                          <  2:9612670/93‑1 (MQ=255)
                aCTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaa                                                                         >  1:6975682/1‑93 (MQ=255)
                aCTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaa                                                                         >  1:9295752/1‑93 (MQ=255)
                aCTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaa                                                                         >  1:4893022/1‑93 (MQ=255)
                 cTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaac                                                                        <  1:2709861/93‑1 (MQ=255)
                  tCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaaca                                                                       >  2:5888781/1‑93 (MQ=255)
                   ccAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaacaa                                                                      <  1:1897620/93‑1 (MQ=255)
                   ccAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGacaaacaa                                                                      <  2:5772178/93‑1 (MQ=255)
                    cAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAat                                                                     <  2:1515502/93‑1 (MQ=255)
                     aGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAata                                                                    >  1:1315391/1‑93 (MQ=255)
                     aGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAata                                                                    >  1:8803126/1‑93 (MQ=255)
                     aGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAata                                                                    <  1:1041231/93‑1 (MQ=255)
                      gCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAatat                                                                   >  2:6750685/1‑93 (MQ=255)
                        gAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATaa                                                                 <  1:2460929/93‑1 (MQ=255)
                        gAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGACGGGCTTTCAGAGCAGACAACCAATATaa                                                                 >  1:6513168/1‑93 (MQ=255)
                         aaaaaTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATaaa                                                                <  1:6002877/93‑1 (MQ=255)
                         aaaaaTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCCGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATaaa                                                                >  2:3513033/1‑93 (MQ=255)
                            aaTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGa                                                             >  2:1605049/1‑93 (MQ=255)
                            aaTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGa                                                             <  1:7840968/93‑1 (MQ=255)
                             aTTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAg                                                            >  1:2084009/1‑93 (MQ=255)
                              ttAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGATTTCAGAGGCGACAAACAATATAAATGAGt                                                           >  2:1941813/1‑93 (MQ=255)
                              tgaaTGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGt                                                           <  1:5057027/91‑1 (MQ=255)
                               tAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTa                                                          >  2:6526495/1‑93 (MQ=255)
                               tAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTa                                                          <  2:7067393/93‑1 (MQ=255)
                                aaTGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAg                                                         >  1:5730071/1‑93 (MQ=255)
                                  tGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGAGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGaa                                                       <  1:5231923/93‑1 (MQ=255)
                                      acaGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCt                                                   >  1:9016974/1‑93 (MQ=255)
                                         gAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTa                                                >  1:831641/1‑93 (MQ=255)
                                          aaTTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTAc                                               <  1:4757893/93‑1 (MQ=255)
                                            tttGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAg                                             >  1:5685243/1‑93 (MQ=255)
                                            tttGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAg                                             >  2:22385/1‑93 (MQ=255)
                                            attGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAg                                             <  2:8197516/92‑1 (MQ=255)
                                              tGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGt                                           <  2:600413/93‑1 (MQ=255)
                                               gTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGtt                                          >  2:7964783/1‑93 (MQ=255)
                                               gTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGtt                                          >  2:7951019/1‑93 (MQ=255)
                                                tAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTc                                         >  1:1001753/1‑93 (MQ=255)
                                                tAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTc                                         >  1:3347565/1‑93 (MQ=255)
                                                tAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTc                                         >  1:6380426/1‑93 (MQ=255)
                                                   agaATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGGGTAGAAGTCTTTACAGGTTCCAc                                      >  2:8816736/1‑93 (MQ=255)
                                                     aaTGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCAccc                                    <  1:1618663/93‑1 (MQ=255)
                                                      aTGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCa                                   >  1:8558481/1‑93 (MQ=255)
                                                       tGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCAt                                  >  1:9760455/1‑93 (MQ=255)
                                                       tGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCAt                                  >  2:8682600/1‑93 (MQ=255)
                                                          tAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTta                               >  1:4018923/1‑93 (MQ=255)
                                                          tAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTta                               >  2:4249238/1‑93 (MQ=255)
                                                          tAATGATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTta                               >  2:6248739/1‑93 (MQ=255)
                                                              gATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAAc                           <  2:2528007/93‑1 (MQ=255)
                                                              gATTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAAc                           <  2:1178902/93‑1 (MQ=255)
                                                               aTTAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACg                          >  1:8392664/1‑93 (MQ=255)
                                                                ttAGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGc                         >  1:7095871/1‑93 (MQ=255)
                                                                  aGCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCtt                       >  2:3932563/1‑93 (MQ=255)
                                                                   gCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTta                      <  2:8494362/93‑1 (MQ=255)
                                                                   gCCCTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTta                      >  1:9473360/1‑93 (MQ=255)
                                                                     ccTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACGCATTTATAACGCTtata                    <  2:3223756/93‑1 (MQ=255)
                                                                      cTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATaa                   >  2:9520931/1‑93 (MQ=255)
                                                                      cTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATaa                   >  2:9442397/1‑93 (MQ=255)
                                                                      cTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATaa                   >  1:5908245/1‑93 (MQ=255)
                                                                      cTGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATaa                   >  1:6229439/1‑93 (MQ=255)
                                                                      cTGGATGGGTAAAATGGAGGGGATTTCAGCGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACACATTTATAACGCTTATaa                   >  2:9764671/1‑93 (MQ=255)
                                                                       tGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATaaa                  >  1:3913371/1‑93 (MQ=255)
                                                                       tGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATaaa                  <  1:9662983/93‑1 (MQ=255)
                                                                       tGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATaaa                  >  1:5171756/1‑93 (MQ=255)
                                                                       tGGATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATaaa                  >  2:6657872/1‑93 (MQ=255)
                                                                        ggATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAAGGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAt                 <  2:5446896/93‑1 (MQ=255)
                                                                         gATGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATg                <  2:3412031/93‑1 (MQ=255)
                                                                           tGGGTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGtt              <  1:324760/93‑1 (MQ=255)
                                                                            gggTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGttt             <  1:7407849/93‑1 (MQ=255)
                                                                             ggTAAAGTGGAGAGGTTTTCAGAGGCGACAAACTATATATATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGtttc            <  2:8984631/93‑2 (MQ=255)
                                                                             ggTAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTa            >  2:3072527/1‑93 (MQ=255)
                                                                               tAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAAt          >  2:5267278/1‑93 (MQ=255)
                                                                               tAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAAt          <  2:7798988/93‑1 (MQ=255)
                                                                               tAAAATGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAAt          >  1:7371836/1‑93 (MQ=255)
                                                                                  aaTGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAg       >  2:4658138/1‑93 (MQ=255)
                                                                                  aaTGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAg       <  2:4119985/93‑1 (MQ=255)
                                                                                   aTGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAgg      >  2:5284569/1‑93 (MQ=255)
                                                                                   aTGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAgg      >  1:3625859/1‑93 (MQ=255)
                                                                                    tGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAgga     >  2:2608607/1‑92 (MQ=255)
                                                                                    tGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGc     >  1:9152224/1‑93 (MQ=255)
                                                                                    tGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGc     <  1:5444953/93‑1 (MQ=255)
                                                                                    tGGAGGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGc     <  1:6126492/93‑1 (MQ=255)
                                                                                    aggagggGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGc     <  1:2221086/92‑1 (MQ=255)
                                                                                      gaggggTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCaa   >  1:4367157/1‑93 (MQ=255)
                                                                                      gaggggTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCaa   <  1:2741241/93‑1 (MQ=255)
                                                                                      gaggggGTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCaa   >  2:4778380/1‑93 (MQ=255)
                                                                                          |                                                                                         
TACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGAGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAAT  >  NC_000913/2902598‑2902777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 210 total aligned reads displayed.
CTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGAGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAATATTT  >  NC_000913/2902595‑2902781
                                                                                              |                                                                                             
atttaccgtaatatgtgttcCTCCAGCGAAAAATTAACGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGG                                                                                               <  SRR4302540.2143649/74‑1 (MQ=60)
CTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGG                                                                                               <  SRR4302540.2143650/94‑1 (MQ=60)
CTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGG                                                                                               <  SRR4302540.9356483/94‑1 (MQ=60)
CTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGG                                                                                               >  SRR4302540.6513023/1‑94 (MQ=60)
CTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGG                                                                                               >  SRR4302540.7903984/1‑94 (MQ=60)
CTATACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGG                                                                                               <  SRR4302540.2143651/94‑1 (MQ=60)
 TTTATCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGG                                                                                              <  SRR4302540.3415097/94‑1 (MQ=60)
 TTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAACATGGA‑GGGG                                                                                              >  SRR4302540.247511/1‑94 (MQ=60)
  TTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGT                                                                                             >  SRR4302540.2868542/1‑94 (MQ=60)
   TACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTT                                                                                            >  SRR4302540.5066145/1‑94 (MQ=60)
    ACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTT                                                                                           >  SRR4302540.6370084/1‑94 (MQ=60)
     CCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTT                                                                                          >  SRR4302540.1473272/1‑94 (MQ=60)
      CGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTC                                                                                         >  SRR4302540.4877377/1‑94 (MQ=60)
      CGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTC                                                                                         >  SRR4302540.765691/1‑94 (MQ=60)
      CGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTC                                                                                         <  SRR4302540.3014903/94‑1 (MQ=60)
      CGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTC                                                                                         >  SRR4302540.6921860/1‑94 (MQ=60)
      CGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGGTTTC                                                                                         >  SRR4302540.5191055/1‑94 (MQ=60)
       GCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCA                                                                                        >  SRR4302540.4296878/1‑94 (MQ=60)
        CAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGCATGCTAATGATTAGCCCTGGATGGGTAAACTGGA‑GGGGTTTTCAG                                                                                       >  SRR4302540.346736/1‑94 (MQ=60)
        CAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAG                                                                                       <  SRR4302540.3224239/94‑1 (MQ=60)
        CAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAG                                                                                       >  SRR4302540.7461413/1‑94 (MQ=60)
         AATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAag                                                                                      >  SRR4302540.1660104/1‑92 (MQ=60)
         AATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGA                                                                                      <  SRR4302540.8156455/94‑1 (MQ=60)
         AATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGA                                                                                      <  SRR4302540.7474473/94‑1 (MQ=60)
         AATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGA                                                                                      >  SRR4302540.5940738/1‑94 (MQ=60)
          ATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAG                                                                                     >  SRR4302540.9823827/1‑94 (MQ=60)
          ATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAG                                                                                     >  SRR4302540.2001294/1‑94 (MQ=60)
            AATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGC                                                                                   >  SRR4302540.8196223/1‑94 (MQ=60)
            AATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGC                                                                                   >  SRR4302540.623939/1‑94 (MQ=60)
            AATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGC                                                                                   <  SRR4302540.6951891/94‑1 (MQ=60)
            AATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGC                                                                                   <  SRR4302540.6951892/94‑1 (MQ=60)
            AATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGC                                                                                   >  SRR4302540.8484920/1‑94 (MQ=60)
             ATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCG                                                                                  >  SRR4302540.1743404/1‑94 (MQ=60)
              TTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGA                                                                                 >  SRR4302540.8418610/1‑94 (MQ=60)
               TTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGAC                                                                                >  SRR4302540.8880225/1‑94 (MQ=60)
                TTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACA                                                                               <  SRR4302540.8429845/94‑1 (MQ=60)
                TTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACA                                                                               >  SRR4302540.3870252/1‑94 (MQ=60)
                TTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACA                                                                               <  SRR4302540.5478118/94‑1 (MQ=60)
                 TCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAA                                                                              >  SRR4302540.2216311/1‑94 (MQ=60)
                  CACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGCATGCTAATGATTAGCCCTGGATGGGCAAAATGGA‑GGGGTTTTCAGAGGCGACAAA                                                                             >  SRR4302540.4945639/1‑94 (MQ=60)
                  CACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAA                                                                             >  SRR4302540.9406809/1‑94 (MQ=60)
                  CACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAA                                                                             >  SRR4302540.7053196/1‑94 (MQ=60)
                  CACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAA                                                                             >  SRR4302540.4945637/1‑94 (MQ=60)
                   ACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAAC                                                                            <  SRR4302540.1455599/94‑1 (MQ=60)
                   ACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAAC                                                                            >  SRR4302540.9429250/1‑94 (MQ=60)
                    CTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACA                                                                           >  SRR4302540.6325121/1‑94 (MQ=60)
                    CTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACA                                                                           <  SRR4302540.2739084/94‑1 (MQ=60)
                    CTCCAGCGAAAAATTAATGCCACAGAATTTGCAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGGTTTCAGAGGCGACAAACA                                                                           >  SRR4302540.6325122/1‑94 (MQ=60)
                     TCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAA                                                                          >  SRR4302540.233842/1‑94 (MQ=60)
                      CCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAGGGGGTTTTCAGAGGCGACAAACAA                                                                          <  SRR4302540.9035458/94‑1 (MQ=60)
                      CCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAAT                                                                         <  SRR4302540.1918384/94‑1 (MQ=60)
                      CCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAAT                                                                         >  SRR4302540.621295/1‑94 (MQ=60)
                      CCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAAT                                                                         <  SRR4302540.2608549/94‑1 (MQ=60)
                      CCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAAT                                                                         <  SRR4302540.5824327/94‑1 (MQ=60)
                      CCAGCGAAAAATTAATGACACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAtaaat                                                                         >  SRR4302540.5115586/1‑89 (MQ=60)
                       CAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATA                                                                        >  SRR4302540.1329069/1‑94 (MQ=60)
                       CAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATA                                                                        <  SRR4302540.1133065/94‑1 (MQ=60)
                       CAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATA                                                                        >  SRR4302540.930563/1‑94 (MQ=60)
                       CAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATA                                                                        >  SRR4302540.8904891/1‑94 (MQ=60)
                       CAGCGAAAAATTAATGCCACAGAATTTGGAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATA                                                                        >  SRR4302540.1329068/1‑94 (MQ=60)
                        AGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACCATAT                                                                       >  SRR4302540.7701760/1‑94 (MQ=60)
                        AGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATAT                                                                       <  SRR4302540.1051818/94‑1 (MQ=60)
                          CGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAA                                                                     <  SRR4302540.328544/94‑1 (MQ=60)
                          CGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAA                                                                     >  SRR4302540.6585521/1‑94 (MQ=60)
                          CGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAA                                                                     >  SRR4302540.4692349/1‑94 (MQ=60)
                          CGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑CGGGCTTTCAGAGCAGACAACCAATATAA                                                                     >  SRR4302540.6585522/1‑94 (MQ=60)
                           GAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAA                                                                    <  SRR4302540.2487419/94‑1 (MQ=60)
                            AAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAAT                                                                   <  SRR4302540.613299/94‑1 (MQ=60)
                            AAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAAT                                                                   <  SRR4302540.6069413/94‑1 (MQ=60)
                            AAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAAT                                                                   <  SRR4302540.6069414/94‑1 (MQ=60)
                            AAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAAT                                                                   <  SRR4302540.9168442/94‑1 (MQ=60)
                            AAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAAT                                                                   <  SRR4302540.3806756/94‑1 (MQ=60)
                            AAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTGTTCAGAGGCGACAAACAATATAAAT                                                                   <  SRR4302540.5076816/94‑1 (MQ=60)
                             AAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATG                                                                  <  SRR4302540.7561465/94‑1 (MQ=60)
                               AATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAG                                                                <  SRR4302540.7932586/94‑1 (MQ=60)
                               AATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAG                                                                >  SRR4302540.2106393/1‑94 (MQ=60)
                               AATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAG                                                                <  SRR4302540.2167883/94‑1 (MQ=60)
                               AATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAG                                                                <  SRR4302540.5253635/94‑1 (MQ=60)
                                ATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGT                                                               <  SRR4302540.5328360/94‑1 (MQ=60)
                                ATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGT                                                               >  SRR4302540.4022611/1‑94 (MQ=60)
                                 TTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTA                                                              >  SRR4302540.4354934/1‑94 (MQ=60)
                                 TTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTA                                                              >  SRR4302540.4354935/1‑94 (MQ=60)
                                 TGAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTA                                                              <  SRR4302540.5111700/94‑1 (MQ=60)
                                  TAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAG                                                             >  SRR4302540.5793171/1‑94 (MQ=60)
                                  TAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAG                                                             >  SRR4302540.5792896/1‑94 (MQ=60)
                                   AATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGA                                                            <  SRR4302540.8168133/94‑1 (MQ=60)
                                   AATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGA                                                            >  SRR4302540.9713899/1‑94 (MQ=60)
                                    ATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAA                                                           <  SRR4302540.5591730/94‑1 (MQ=60)
                                    ATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAA                                                           >  SRR4302540.935186/1‑94 (MQ=60)
                                     TGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAG                                                          <  SRR4302540.5288980/94‑1 (MQ=60)
                                     TGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGAGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAG                                                          <  SRR4302540.5288981/94‑1 (MQ=60)
                                      GCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGT                                                         >  SRR4302540.9600705/1‑94 (MQ=60)
                                       CCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTC                                                        >  SRR4302540.9417801/1‑94 (MQ=60)
                                        CACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCT                                                       >  SRR4302540.492833/1‑94 (MQ=60)
                                        CACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCT                                                       >  SRR4302540.9125171/1‑94 (MQ=60)
                                          CAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTT                                                     <  SRR4302540.3556252/94‑1 (MQ=60)
                                          CAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTT                                                     >  SRR4302540.6566442/1‑94 (MQ=60)
                                           AGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTC                                                    >  SRR4302540.8675563/1‑94 (MQ=60)
                                           AGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTA                                                    >  SRR4302540.840478/1‑94 (MQ=60)
                                           AGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTA                                                    >  SRR4302540.3323508/1‑94 (MQ=60)
                                             AATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACA                                                  <  SRR4302540.4808665/94‑1 (MQ=60)
                                              ATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAG                                                 >  SRR4302540.5747832/1‑94 (MQ=60)
                                              ATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAG                                                 <  SRR4302540.1545140/94‑1 (MQ=60)
                                               TTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGG                                                <  SRR4302540.8331201/94‑1 (MQ=60)
                                               TTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGG                                                <  SRR4302540.8743405/94‑1 (MQ=60)
                                                TTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGT                                               <  SRR4302540.1639691/94‑1 (MQ=60)
                                                  GTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTC                                             >  SRR4302540.6451460/1‑94 (MQ=60)
                                                  GTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTC                                             >  SRR4302540.1011931/1‑94 (MQ=60)
                                                  GTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTC                                             >  SRR4302540.3384279/1‑94 (MQ=60)
                                                  GTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTC                                             <  SRR4302540.1012150/94‑1 (MQ=60)
                                                    AGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCA                                           >  SRR4302540.6063667/1‑94 (MQ=60)
                                                    AGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCA                                           >  SRR4302540.5756639/1‑94 (MQ=60)
                                                     GAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCAC                                          >  SRR4302540.1765412/1‑94 (MQ=60)
                                                     GAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCAC                                          >  SRR4302540.7543245/1‑94 (MQ=60)
                                                     GAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCAC                                          >  SRR4302540.3379/1‑94 (MQ=60)
                                                     GAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCAC                                          <  SRR4302540.6159004/94‑1 (MQ=60)
                                                      AGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACC                                         <  SRR4302540.6999888/94‑1 (MQ=60)
                                                        AATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCA                                       >  SRR4302540.8657883/1‑94 (MQ=60)
                                                        AATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCA                                       <  SRR4302540.4109572/94‑1 (MQ=60)
                                                        AATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCA                                       <  SRR4302540.1636415/94‑1 (MQ=60)
                                                        AATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCA                                       >  SRR4302540.7763060/1‑94 (MQ=60)
                                                         ATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCAT                                      >  SRR4302540.9874945/1‑94 (MQ=60)
                                                          TGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATT                                     <  SRR4302540.9535986/94‑1 (MQ=60)
                                                            CTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTA                                   >  SRR4302540.4062216/1‑94 (MQ=60)
                                                            CTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTA                                   >  SRR4302540.5129831/1‑94 (MQ=60)
                                                            CTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGGTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACGCATTTA                                   >  SRR4302540.4062215/1‑94 (MQ=60)
                                                            CTAATGATTAGCCCTGGATGGGAAAAATGGA‑GGAGTTTTCAGAGGCGACAAACAATACAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTA                                   >  SRR4302540.5132319/1‑94 (MQ=60)
                                                             TAATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTAT                                  <  SRR4302540.1001081/94‑1 (MQ=60)
                                                              AATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATA                                 >  SRR4302540.2375001/1‑94 (MQ=60)
                                                              AATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATA                                 <  SRR4302540.5069364/94‑1 (MQ=60)
                                                               ATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAA                                >  SRR4302540.7174597/1‑94 (MQ=60)
                                                               ATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAA                                >  SRR4302540.7491088/1‑94 (MQ=60)
                                                               ATGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAA                                <  SRR4302540.6242582/94‑1 (MQ=60)
                                                                TGATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAAC                               >  SRR4302540.932858/1‑94 (MQ=60)
                                                                 GATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACG                              <  SRR4302540.1048854/94‑1 (MQ=60)
                                                                 GATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACG                              >  SRR4302540.8490062/1‑94 (MQ=60)
                                                                 GATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTGCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACG                              <  SRR4302540.9788623/94‑1 (MQ=60)
                                                                  ATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGC                             <  SRR4302540.4520620/94‑1 (MQ=60)
                                                                  ATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGC                             <  SRR4302540.6803622/94‑1 (MQ=60)
                                                                  ATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGC                             >  SRR4302540.7174835/1‑94 (MQ=60)
                                                                  ATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGC                             >  SRR4302540.7174836/1‑94 (MQ=60)
                                                                  ATTAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGC                             >  SRR4302540.2449723/1‑94 (MQ=60)
                                                                    TAGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTT                           <  SRR4302540.432804/94‑1 (MQ=60)
                                                                     AGCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTA                          >  SRR4302540.9585722/1‑94 (MQ=60)
                                                                     AGCCCTGGATGGGTAAAATGGA‑GGGGGTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTA                          >  SRR4302540.5693393/1‑94 (MQ=60)
                                                                      GCCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTAT                         <  SRR4302540.5476004/94‑1 (MQ=60)
                                                                       CCCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATA                        >  SRR4302540.8987835/1‑94 (MQ=60)
                                                                        CCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAA                       >  SRR4302540.5973520/1‑94 (MQ=60)
                                                                        CCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAA                       >  SRR4302540.8939088/1‑94 (MQ=60)
                                                                        CCTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAA                       <  SRR4302540.1979150/94‑1 (MQ=60)
                                                                         CTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAA                      >  SRR4302540.2618753/1‑94 (MQ=60)
                                                                         CTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAA                      <  SRR4302540.2189184/94‑1 (MQ=60)
                                                                         CTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAA                      >  SRR4302540.1731230/1‑94 (MQ=60)
                                                                         CTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAA                      >  SRR4302540.3955766/1‑94 (MQ=60)
                                                                         CTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAA                      <  SRR4302540.3543418/94‑1 (MQ=60)
                                                                         CTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAA                      >  SRR4302540.6747229/1‑94 (MQ=60)
                                                                         CTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAA                      >  SRR4302540.5228038/1‑94 (MQ=60)
                                                                         CTGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAA                      >  SRR4302540.7353360/1‑94 (MQ=60)
                                                                          TGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAT                     >  SRR4302540.1829425/1‑94 (MQ=60)
                                                                          TGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAT                     <  SRR4302540.6628054/94‑1 (MQ=60)
                                                                          TGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAT                     >  SRR4302540.7694877/1‑94 (MQ=60)
                                                                          TGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAT                     >  SRR4302540.1161236/1‑94 (MQ=60)
                                                                          TGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAT                     <  SRR4302540.9741944/94‑1 (MQ=60)
                                                                          TGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAT                     <  SRR4302540.5753134/94‑1 (MQ=60)
                                                                          TGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAT                     <  SRR4302540.9776722/94‑1 (MQ=60)
                                                                          TGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAAT                     <  SRR4302540.2685453/94‑1 (MQ=60)
                                                                          TGGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTGACAGGTTCCACCCATTTATAACGCTTATAAAT                     <  SRR4302540.9776723/94‑1 (MQ=60)
                                                                           GGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATG                    >  SRR4302540.5925390/1‑94 (MQ=60)
                                                                           GGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATG                    >  SRR4302540.479251/1‑94 (MQ=60)
                                                                           GGATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATG                    >  SRR4302540.4116504/1‑94 (MQ=60)
                                                                            GATGGGTAAAATGGA‑GGTGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGGCTTTACAGGTTCCACCCATTTATAACGCGTATAAATGT                   <  SRR4302540.8588873/94‑1 (MQ=60)
                                                                            GATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGT                   >  SRR4302540.6103501/1‑94 (MQ=60)
                                                                            GATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGT                   <  SRR4302540.8588872/94‑1 (MQ=60)
                                                                            GATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGT                   >  SRR4302540.2752601/1‑94 (MQ=60)
                                                                             ATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTT                  <  SRR4302540.7432862/94‑1 (MQ=60)
                                                                             ATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTT                  >  SRR4302540.9898051/1‑94 (MQ=60)
                                                                             ATGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTT                  >  SRR4302540.9898052/1‑94 (MQ=60)
                                                                              TGGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTT                 <  SRR4302540.328013/94‑1 (MQ=60)
                                                                               GGGTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTA                <  SRR4302540.7490371/94‑1 (MQ=60)
                                                                                 GTAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAAT              >  SRR4302540.7454007/1‑94 (MQ=60)
                                                                                  TAAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATC             <  SRR4302540.4991273/94‑1 (MQ=60)
                                                                                   AAAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCA            <  SRR4302540.8536057/94‑1 (MQ=60)
                                                                                    AAATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAG           <  SRR4302540.4968220/94‑1 (MQ=60)
                                                                                     AATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGG          >  SRR4302540.3665544/1‑94 (MQ=60)
                                                                                      ATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGC         >  SRR4302540.9262109/1‑94 (MQ=60)
                                                                                      ATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGC         <  SRR4302540.7165294/94‑1 (MQ=60)
                                                                                      ATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGC         >  SRR4302540.425183/1‑94 (MQ=60)
                                                                                      ATGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGC         >  SRR4302540.8100313/1‑94 (MQ=60)
                                                                                       TGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCA        <  SRR4302540.5504871/94‑1 (MQ=60)
                                                                                       TGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCA        >  SRR4302540.5562429/1‑94 (MQ=60)
                                                                                       TGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCA        <  SRR4302540.6194727/94‑1 (MQ=60)
                                                                                       AGGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCA        <  SRR4302540.2245032/94‑1 (MQ=60)
                                                                                        GGA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAA       >  SRR4302540.4414615/1‑94 (MQ=60)
                                                                                         GA‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAAT      <  SRR4302540.2770840/94‑1 (MQ=60)
                                                                                          A‑GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAATA     >  SRR4302540.231463/1‑94 (MQ=60)
                                                                                            GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAATAT    >  SRR4302540.906338/1‑94 (MQ=60)
                                                                                            GGGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAATAT    >  SRR4302540.8464465/1‑94 (MQ=60)
                                                                                             GGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAATATT   >  SRR4302540.5582033/1‑94 (MQ=60)
                                                                                             GGGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAATATT   >  SRR4302540.3516017/1‑94 (MQ=60)
                                                                                              GGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAATATTT  <  SRR4302540.5893740/94‑1 (MQ=60)
                                                                                              |                                                                                             
CTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGA‑GGAGTTTTCAGAGGCGACAAACAATATAAATGAGTAGAAGTCTTTACAGGTTCCACCCATTTATAACGCTTATAAATGTTTAATCAGGCAATATTT  >  NC_000913/2902595‑2902781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑