Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,915,759	A→G	D894G (GAT→GGT)	barA →	sensor‑regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,915,759	0	A	G	99.8%	1443.5 / NA	445	D894G (GAT→GGT)	barA	sensor‑regulator
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (237/207); total (238/207)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 501 total aligned reads displayed.

ATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTC  >  NC_000913/2915669‑2915848

aTGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGtt                                                                                         <  1:586362/93‑1 (MQ=255)

aTGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGtt                                                                                         >  1:3802635/1‑93 (MQ=255)

 tGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGttt                                                                                        <  2:4492812/93‑1 (MQ=255)

 tGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGttt                                                                                        <  2:2132821/93‑1 (MQ=255)

   gCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTgg                                                                                      <  2:9813895/93‑1 (MQ=255)

       ttGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAcc                                                                                  >  1:1190327/1‑93 (MQ=255)

       ttGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAcc                                                                                  <  2:5660168/93‑1 (MQ=255)

         gCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCgg                                                                                >  2:2863769/1‑93 (MQ=255)

          cGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGa                                                                               <  1:5788119/93‑1 (MQ=255)

            gCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgc                                                                             <  1:4734715/93‑1 (MQ=255)

              tataGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGACCAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgctc                                                                           >  1:8335359/1‑92 (MQ=255)

              tataGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgctg                                                                           >  2:8088738/1‑93 (MQ=255)

              tataGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgctg                                                                           <  1:4032154/93‑1 (MQ=255)

               ataGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgctgt                                                                          >  1:7608019/1‑92 (MQ=255)

               ataGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgctgc                                                                          >  1:4585905/1‑93 (MQ=255)

               ataGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgctgc                                                                          <  2:5887987/93‑1 (MQ=255)

                 aGCGTTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGctgctg                                                                        <  2:4844731/93‑1 (MQ=255)

                  gCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTgg                                                                       <  1:3239806/93‑1 (MQ=255)

                    ggTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGaa                                                                     <  1:2844038/93‑1 (MQ=255)

                    ggTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGaa                                                                     >  2:8502261/1‑93 (MQ=255)

                    ggTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGaa                                                                     <  2:7268722/93‑1 (MQ=255)

                     gtgtGCCACGTATGAAGAATCTCTGCCAACTGATGGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAc                                                                    >  2:6374969/1‑93 (MQ=255)

                      tgtgCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACt                                                                   <  2:3400927/93‑1 (MQ=255)

                        tgCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGt                                                                 <  1:78105/93‑1 (MQ=255)

                        tgCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGt                                                                 >  1:8087342/1‑93 (MQ=255)

                        tgCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGt                                                                 >  2:3900466/1‑93 (MQ=255)

                        tgCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGt                                                                 <  2:9277760/93‑1 (MQ=255)

                          ccACGTATGAAGACTCTCTGCCGGCTGATCGAACAACAGCTCCGTGGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTg                                                               <  1:8980343/93‑1 (MQ=255)

                               tATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACga                                                          >  1:9493589/1‑93 (MQ=255)

                               tATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACga                                                          <  1:7416098/93‑1 (MQ=255)

                                ttGAAGAAGCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACgag                                                         <  2:181966/92‑1 (MQ=255)

                                aTGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACgag                                                         >  1:4963712/1‑93 (MQ=255)

                                 tGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGATTGGAACCGGAGCTGCTGGAACTGTTGGACgaga                                                        >  2:6627892/1‑93 (MQ=255)

                                    agaaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATgg                                                     >  1:1668755/1‑93 (MQ=255)

                                    agaaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATgg                                                     >  2:1429290/1‑93 (MQ=255)

                                    agaaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATgg                                                     <  1:2268817/93‑1 (MQ=255)

                                     aaaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGa                                                    <  1:5457284/92‑1 (MQ=255)

                                      aaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACAAGATGGaa                                                   >  1:2394090/1‑92 (MQ=255)

                                       aTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATa                                                  <  2:8774375/93‑1 (MQ=255)

                                        tctcTGCCAACTGATCGAACAATATCTACGTAGCGGTACTAATGTTGAAGGTTTGGAATCGTAGCTGCTGGAACTGTTGGTCGAGATGGATat                                                 >  2:8941520/1‑92 (MQ=255)

                                        tctcTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATaa                                                 >  2:9530235/1‑93 (MQ=255)

                                        tctcTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATaa                                                 <  2:2913721/93‑1 (MQ=255)

                                         ctctGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAAt                                                <  2:1908804/93‑1 (MQ=255)

                                           ctGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGt                                              <  2:6544422/93‑1 (MQ=255)

                                               cAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcg                                          <  1:141040/93‑1 (MQ=255)

                                                aaCTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcgc                                         >  1:6205002/1‑93 (MQ=255)

                                                aaCTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcgc                                         >  2:157971/1‑93 (MQ=255)

                                                 aCTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcgcg                                        >  1:7943564/1‑93 (MQ=255)

                                                  cTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcgcgc                                       >  1:8265184/1‑93 (MQ=255)

                                                   tGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcgcgcg                                      >  2:8365410/1‑93 (MQ=255)

                                                   tGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcgcgcg                                      >  2:1707199/1‑93 (MQ=255)

                                                     aTCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGaa                                    <  1:1103945/93‑1 (MQ=255)

                                                     aTCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGaa                                    >  2:245280/1‑93 (MQ=255)

                                                     aTCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGaa                                    >  1:6645907/1‑93 (MQ=255)

                                                      tCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAg                                   >  1:8476187/1‑93 (MQ=255)

                                                       cGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGc                                  >  1:5253511/1‑93 (MQ=255)

                                                        gAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGcc                                 <  2:4113013/93‑1 (MQ=255)

                                                        gAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGcc                                 <  2:7964394/93‑1 (MQ=255)

                                                           caacaGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAga                              >  1:2578491/1‑92 (MQ=255)

                                                           caacaGCTACGTAGCGGTACCAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGc                              >  2:3847661/1‑93 (MQ=255)

                                                            aacaGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCa                             >  2:4966121/1‑93 (MQ=255)

                                                            aacaGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCa                             <  2:2385262/93‑1 (MQ=255)

                                                            aacaGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCa                             >  1:9192545/1‑93 (MQ=255)

                                                            aacaGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCa                             <  2:6834934/93‑1 (MQ=255)

                                                             acaGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCaa                            >  1:2088858/1‑93 (MQ=255)

                                                                  tACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGCAGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtc                       >  1:3600369/1‑93 (MQ=255)

                                                                  tACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtc                       >  1:9315941/1‑93 (MQ=255)

                                                                  tACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtc                       >  1:8744235/1‑93 (MQ=255)

                                                                  tACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtc                       >  1:130316/1‑93 (MQ=255)

                                                                   aCGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtct                      >  2:5183804/1‑93 (MQ=255)

                                                                    cGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtctc                     >  1:6089811/1‑93 (MQ=255)

                                                                     gTAGCGGTACTAAAGAAGAAGGTTTGCAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATGCTCg                    <  1:1907604/93‑1 (MQ=255)

                                                                      tAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCgg                   <  1:4442193/93‑1 (MQ=255)

                                                                      tAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCgg                   >  1:4637242/1‑93 (MQ=255)

                                                                      tAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCgg                   >  2:5485527/1‑93 (MQ=255)

                                                                       aGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCggg                  >  1:7082474/1‑93 (MQ=255)

                                                                         cGGTACTAAAGAAGAAGGTTTGGAAGCGGAGCTGCTGGAACTGTCGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTa                <  2:758033/93‑1 (MQ=255)

                                                                         cGGTACTAAAGAAGAAGGTTTGGAACCGGATCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTa                <  1:4242111/93‑1 (MQ=255)

                                                                         cGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTa                <  1:5286689/93‑1 (MQ=255)

                                                                          ggTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTaa               <  2:8238651/93‑1 (MQ=255)

                                                                           gTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAAt              >  2:2570995/1‑93 (MQ=255)

                                                                           gTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAAt              >  1:6442373/1‑93 (MQ=255)

                                                                              cTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGa           <  2:4421719/93‑1 (MQ=255)

                                                                               tAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGCCGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGAt          >  2:3576946/1‑93 (MQ=255)

                                                                               tAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGAt          >  2:2727532/1‑93 (MQ=255)

                                                                               tAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGAt          <  2:3049742/93‑1 (MQ=255)

                                                                               tAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGCTGGATAATGTCGCGCGCGAAGCCAGCAACGTTCTCGGGTATTGGAt          >  1:313473/1‑93 (MQ=255)

                                                                                 aagaagaagGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGt        <  1:6296359/93‑1 (MQ=255)

                                                                                  agaagaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTc       >  1:975923/1‑93 (MQ=255)

                                                                                  agaagaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTc       <  2:9416346/93‑1 (MQ=255)

                                                                                   gaagaaggGTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCt      <  2:3318277/93‑1 (MQ=255)

                                                                                    aagaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCtt     <  2:9018048/93‑1 (MQ=255)

                                                                                     agaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTg    >  2:7801597/1‑93 (MQ=255)

                                                                                     agaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTg    >  2:7167658/1‑93 (MQ=255)

                                                                                     agaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTg    >  2:6267450/1‑93 (MQ=255)

                                                                                     agaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTg    <  1:5112902/93‑1 (MQ=255)

                                                                                     agaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTg    >  2:2016753/1‑93 (MQ=255)

                                                                                      gaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGt   >  2:1044713/1‑93 (MQ=255)

                                                                                      gaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGt   >  2:1247275/1‑93 (MQ=255)

                                                                                      gaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGt   <  2:5262829/93‑1 (MQ=255)

ATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTC  >  NC_000913/2915669‑2915848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 261 total aligned reads displayed.

TGCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAGT  >  NC_000913/2915666‑2915852

TGCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGG                                                                                               >  SRR4302540.1651555/1‑94 (MQ=60)

TGCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGG                                                                                               >  SRR4302540.5689864/1‑94 (MQ=60)

TGCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGG                                                                                               >  SRR4302540.8688779/1‑94 (MQ=60)

 GCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGT                                                                                              >  SRR4302540.5778502/1‑94 (MQ=60)

 GCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGT                                                                                              >  SRR4302540.5674041/1‑94 (MQ=60)

 GCATGACAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGT                                                                                              <  SRR4302540.2496481/94‑1 (MQ=60)

  CATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTT                                                                                             >  SRR4302540.3844058/1‑94 (MQ=60)

   ATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTT                                                                                            <  SRR4302540.3565697/94‑1 (MQ=60)

   ATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTT                                                                                            <  SRR4302540.667107/94‑1 (MQ=60)

   ATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTT                                                                                            >  SRR4302540.8078702/1‑94 (MQ=60)

    TGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTG                                                                                           >  SRR4302540.4469628/1‑94 (MQ=60)

     GGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGG                                                                                          <  SRR4302540.9389278/94‑1 (MQ=60)

     GGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGG                                                                                          >  SRR4302540.1440354/1‑94 (MQ=60)

      GCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGA                                                                                         >  SRR4302540.6234182/1‑94 (MQ=60)

       CAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAA                                                                                        <  SRR4302540.2924421/94‑1 (MQ=60)

       CAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAA                                                                                        <  SRR4302540.973034/94‑1 (MQ=60)

       CAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAAGCTCTGCCAACTTATCGAACAACAGCTACGTAGCGGTACTAAAGAAAAAGGTTTGGAC                                                                                        >  SRR4302540.371437/1‑94 (MQ=60)

        AGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACACCAGCTACGTAGCGGTACTAAAGAACGCGATTTGGAAC                                                                                       >  SRR4302540.8930721/1‑94 (MQ=60)

        AGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAC                                                                                       <  SRR4302540.5225668/94‑1 (MQ=60)

        AGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAC                                                                                       >  SRR4302540.3197195/1‑94 (MQ=60)

        AGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAC                                                                                       >  SRR4302540.8150671/1‑94 (MQ=60)

        AGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAC                                                                                       <  SRR4302540.8000015/94‑1 (MQ=60)

         GTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACG                                                                                      >  SRR4302540.6967132/1‑94 (MQ=60)

         GTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACC                                                                                      <  SRR4302540.684704/94‑1 (MQ=60)

         GTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACC                                                                                      >  SRR4302540.8601784/1‑94 (MQ=60)

         GTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACC                                                                                      >  SRR4302540.534722/1‑94 (MQ=60)

         GTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACC                                                                                      >  SRR4302540.9100333/1‑94 (MQ=60)

         GTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACC                                                                                      >  SRR4302540.1202599/1‑94 (MQ=60)

          TTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCG                                                                                     <  SRR4302540.9351043/94‑1 (MQ=60)

          TTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCG                                                                                     <  SRR4302540.5326227/94‑1 (MQ=60)

           TGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGG                                                                                    >  SRR4302540.1198921/1‑94 (MQ=60)

            GCGGCTATAGCGGGGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGA                                                                                   >  SRR4302540.8995300/1‑94 (MQ=60)

             CGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAG                                                                                  >  SRR4302540.6281572/1‑94 (MQ=60)

             CGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAG                                                                                  <  SRR4302540.5852068/94‑1 (MQ=60)

             CGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAG                                                                                  <  SRR4302540.5423515/94‑1 (MQ=60)

               GCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCT                                                                                <  SRR4302540.4785268/94‑1 (MQ=60)

               GCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCT                                                                                <  SRR4302540.6319847/94‑1 (MQ=60)

               GCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCT                                                                                <  SRR4302540.1748920/94‑1 (MQ=60)

               GCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCT                                                                                <  SRR4302540.2021361/94‑1 (MQ=60)

                CTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGACCAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTC                                                                               >  SRR4302540.8432113/1‑94 (MQ=60)

                CTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTG                                                                               <  SRR4302540.9838383/94‑1 (MQ=60)

                CTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTG                                                                               >  SRR4302540.8432109/1‑94 (MQ=60)

                 TATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGNANNAGGTTTGGAACGNGAGCTGN                                                                              >  SRR4302540.2412357/1‑94 (MQ=60)

                 TATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGC                                                                              >  SRR4302540.5195464/1‑94 (MQ=60)

                 TATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGC                                                                              >  SRR4302540.4635305/1‑94 (MQ=60)

                 TATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGC                                                                              <  SRR4302540.4075633/94‑1 (MQ=60)

                 TATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGC                                                                              >  SRR4302540.8447827/1‑94 (MQ=60)

                  ATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCT                                                                             >  SRR4302540.8595600/1‑94 (MQ=60)

                  ATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCT                                                                             >  SRR4302540.3565036/1‑94 (MQ=60)

                  ATAGCGGTGTGCCACGTATGAAGAAACTCTGCCAACTGATCGAACAACAGCTACTTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCT                                                                             >  SRR4302540.10084711/1‑94 (MQ=60)

                   GAGCGGGGTGCCACGGATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTG                                                                            <  SRR4302540.7585205/94‑1 (MQ=60)

                    AGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGG                                                                           <  SRR4302540.1212034/94‑1 (MQ=60)

                     GCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGA                                                                          <  SRR4302540.3275055/94‑1 (MQ=60)

                     GCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGA                                                                          <  SRR4302540.3275056/94‑1 (MQ=60)

                     GCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGA                                                                          <  SRR4302540.3033235/94‑1 (MQ=60)

                      CGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAA                                                                         <  SRR4302540.451865/94‑1 (MQ=60)

                      CGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAA                                                                         >  SRR4302540.9631029/1‑94 (MQ=60)

                       GGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAC                                                                        <  SRR4302540.4731670/94‑1 (MQ=60)

                       GGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAC                                                                        <  SRR4302540.2325800/94‑1 (MQ=60)

                       GGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAC                                                                        <  SRR4302540.2874813/94‑1 (MQ=60)

                        GTGTGCCACGTATGAAGAATCTCTGCGAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACT                                                                       <  SRR4302540.7391951/94‑1 (MQ=60)

                         TGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTG                                                                      <  SRR4302540.7604752/94‑1 (MQ=60)

                          GTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGT                                                                     <  SRR4302540.3873102/94‑1 (MQ=60)

                          GTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGT                                                                     >  SRR4302540.796098/1‑94 (MQ=60)

                          GTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGT                                                                     >  SRR4302540.8181213/1‑94 (MQ=60)

                          GTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGT                                                                     >  SRR4302540.1136948/1‑94 (MQ=60)

                          GTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGT                                                                     >  SRR4302540.2227304/1‑94 (MQ=60)

                           TGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTT                                                                    <  SRR4302540.78925/94‑1 (MQ=60)

                           TGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTT                                                                    >  SRR4302540.242456/1‑94 (MQ=60)

                           TGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTT                                                                    <  SRR4302540.2346257/94‑1 (MQ=60)

                           TGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTT                                                                    <  SRR4302540.5601678/94‑1 (MQ=60)

                           TGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTT                                                                    <  SRR4302540.2136134/94‑1 (MQ=60)

                            GCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTG                                                                   <  SRR4302540.5066075/94‑1 (MQ=60)

                             CCACGTATGAAGACTCTCTGCCGGCTGATCGAACAACAGCTCCGTGGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGG                                                                  <  SRR4302540.9087358/94‑1 (MQ=60)

                             CCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGG                                                                  >  SRR4302540.5226020/1‑94 (MQ=60)

                              CACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGA                                                                 <  SRR4302540.146958/94‑1 (MQ=60)

                               CCGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGAC                                                                <  SRR4302540.8225436/94‑1 (MQ=60)

                               ACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGAC                                                                <  SRR4302540.4780256/94‑1 (MQ=60)

                                CGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACG                                                               <  SRR4302540.4266362/94‑1 (MQ=60)

                                 GTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGA                                                              <  SRR4302540.2183006/94‑1 (MQ=60)

                                 GTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGA                                                              <  SRR4302540.3550160/94‑1 (MQ=60)

                                 GTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGA                                                              >  SRR4302540.374487/1‑94 (MQ=60)

                                  TATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTATTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAG                                                             >  SRR4302540.5017398/1‑94 (MQ=60)

                                  TATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAG                                                             <  SRR4302540.7498699/94‑1 (MQ=60)

                                  TATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAG                                                             >  SRR4302540.5017399/1‑94 (MQ=60)

                                  TATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAG                                                             <  SRR4302540.5777047/94‑1 (MQ=60)

                                  TATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGAACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAG                                                             >  SRR4302540.8986621/1‑94 (MQ=60)

                                    TGAAGAATCTGTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGAT                                                           <  SRR4302540.4278492/94‑1 (MQ=60)

                                    TGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGAT                                                           <  SRR4302540.6075089/94‑1 (MQ=60)

                                     GAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATG                                                          >  SRR4302540.4780202/1‑94 (MQ=60)

                                     GAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATG                                                          <  SRR4302540.9133253/94‑1 (MQ=60)

                                     GAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATG                                                          <  SRR4302540.8579755/94‑1 (MQ=60)

                                      AAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGG                                                         >  SRR4302540.1686914/1‑94 (MQ=60)

                                      AAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGG                                                         <  SRR4302540.1707361/94‑1 (MQ=60)

                                      AAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCAGCTGCAACTGTTGGACGAGATGG                                                         >  SRR4302540.4638250/1‑94 (MQ=60)

                                       AGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGA                                                        <  SRR4302540.2293162/94‑1 (MQ=60)

                                       AGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTCGGACGAGATGGA                                                        <  SRR4302540.6064283/94‑1 (MQ=60)

                                        GAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGAT                                                       <  SRR4302540.6698323/94‑1 (MQ=60)

                                        GAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACAAGATGGAA                                                       >  SRR4302540.2419886/1‑94 (MQ=60)

                                        AAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGAT                                                       <  SRR4302540.5517349/94‑1 (MQ=60)

                                         AATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATA                                                      >  SRR4302540.2076290/1‑94 (MQ=60)

                                          ATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAA                                                     <  SRR4302540.2434210/94‑1 (MQ=60)

                                          ATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAA                                                     >  SRR4302540.1797106/1‑94 (MQ=60)

                                           TCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAAT                                                    <  SRR4302540.4650281/94‑1 (MQ=60)

                                           TCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAAT                                                    <  SRR4302540.6874887/94‑1 (MQ=60)

                                           TCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAAT                                                    <  SRR4302540.1377759/94‑1 (MQ=60)

                                             TCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGT                                                  <  SRR4302540.4431239/94‑1 (MQ=60)

                                              CTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTC                                                 <  SRR4302540.6565294/94‑1 (MQ=60)

                                              CTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTC                                                 >  SRR4302540.5319418/1‑94 (MQ=60)

                                               TGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCG                                                <  SRR4302540.9328701/94‑1 (MQ=60)

                                                 CCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCG                                              >  SRR4302540.765313/1‑94 (MQ=60)

                                                 CCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCG                                              >  SRR4302540.1323260/1‑94 (MQ=60)

                                                  CAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGC                                             >  SRR4302540.6274069/1‑94 (MQ=60)

                                                  CAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGC                                             >  SRR4302540.6274067/1‑94 (MQ=60)

                                                  CAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGC                                             >  SRR4302540.4866925/1‑94 (MQ=60)

                                                  CAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGC                                             >  SRR4302540.450515/1‑94 (MQ=60)

                                                   AACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCG                                            >  SRR4302540.8036151/1‑94 (MQ=60)

                                                   AACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAATGTTGGACGAGATGGATAATGTCGCGCG                                            >  SRR4302540.8035750/1‑94 (MQ=60)

                                                    ACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGC                                           >  SRR4302540.8361224/1‑94 (MQ=60)

                                                    ACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGC                                           >  SRR4302540.8361223/1‑94 (MQ=60)

                                                      TGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGA                                         >  SRR4302540.2890291/1‑94 (MQ=60)

                                                      TGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGA                                         <  SRR4302540.2755066/94‑1 (MQ=60)

                                                       GATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAA                                        >  SRR4302540.6719434/1‑94 (MQ=60)

                                                       GATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAA                                        >  SRR4302540.4355846/1‑94 (MQ=60)

                                                       GATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAA                                        <  SRR4302540.9568998/94‑1 (MQ=60)

                                                        ATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGTTTTGAAACCGGAGTTGCGGGAACTGTTGGACGggttggttaatttgtcgcgggaag                                       >  SRR4302540.5889985/1‑70 (MQ=60)

                                                        ATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAG                                       >  SRR4302540.5889984/1‑94 (MQ=60)

                                                        ATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAG                                       >  SRR4302540.1288850/1‑94 (MQ=60)

                                                        ATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAG                                       <  SRR4302540.1115326/94‑1 (MQ=60)

                                                        ATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAG                                       >  SRR4302540.5662402/1‑94 (MQ=60)

                                                         TCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGC                                      >  SRR4302540.5098074/1‑94 (MQ=60)

                                                         TCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGC                                      >  SRR4302540.5098075/1‑94 (MQ=60)

                                                         TCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGC                                      >  SRR4302540.5310815/1‑94 (MQ=60)

                                                          CGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCC                                     <  SRR4302540.4244300/94‑1 (MQ=60)

                                                            AACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAG                                   <  SRR4302540.534285/94‑1 (MQ=60)

                                                             ACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGC                                  >  SRR4302540.3252329/1‑94 (MQ=60)

                                                             ACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGA                                  >  SRR4302540.2606294/1‑94 (MQ=60)

                                                              CAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCA                                 >  SRR4302540.5989640/1‑94 (MQ=60)

                                                              CAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCA                                 >  SRR4302540.6497203/1‑94 (MQ=60)

                                                              CAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCA                                 >  SRR4302540.9302801/1‑94 (MQ=60)

                                                               AACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAA                                <  SRR4302540.1496070/94‑1 (MQ=60)

                                                               AACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAA                                >  SRR4302540.7873277/1‑94 (MQ=60)

                                                               AACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAA                                >  SRR4302540.3867629/1‑94 (MQ=60)

                                                                ACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAA                               >  SRR4302540.8573695/1‑94 (MQ=60)

                                                                  AGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAAT                             <  SRR4302540.7803078/94‑1 (MQ=60)

                                                                  AGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAAT                             <  SRR4302540.1180265/94‑1 (MQ=60)

                                                                   GCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATT                            <  SRR4302540.6098720/94‑1 (MQ=60)

                                                                    CTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGCAGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTC                           >  SRR4302540.3639716/1‑94 (MQ=60)

                                                                    CTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTC                           >  SRR4302540.8845722/1‑94 (MQ=60)

                                                                    CTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTC                           >  SRR4302540.6502154/1‑94 (MQ=60)

                                                                    CTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTC                           >  SRR4302540.9427116/1‑94 (MQ=60)

                                                                    CTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTC                           <  SRR4302540.5921889/94‑1 (MQ=60)

                                                                     TACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCT                          >  SRR4302540.4627274/1‑94 (MQ=60)

                                                                       CGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCG                        >  SRR4302540.9368701/1‑94 (MQ=60)

                                                                        GTAGCGGTACTAAAGAATAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGG                       <  SRR4302540.1207124/94‑1 (MQ=60)

                                                                        GTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGG                       >  SRR4302540.6205738/1‑94 (MQ=60)

                                                                        GTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGG                       >  SRR4302540.1395339/1‑94 (MQ=60)

                                                                        GTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGG                       >  SRR4302540.4686891/1‑94 (MQ=60)

                                                                        GTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTGGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAACTTCTCGG                       >  SRR4302540.4686890/1‑94 (MQ=60)

                                                                        GTAGCGGTACTAAAGAAGAAGGTTTGCAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATGCTCGG                       <  SRR4302540.1928449/94‑1 (MQ=60)

                                                                         TAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGG                      <  SRR4302540.4054119/94‑1 (MQ=60)

                                                                         TAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGG                      >  SRR4302540.7161298/1‑94 (MQ=60)

                                                                         TAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGG                      <  SRR4302540.8573023/94‑1 (MQ=60)

                                                                          AGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGT                     >  SRR4302540.5402356/1‑94 (MQ=60)

                                                                          AGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGGTGGACGAGATGGATAATATCGCGCGAGAAGCAAGCAAAATTCTCGGGA                     >  SRR4302540.9206200/1‑94 (MQ=60)

                                                                            CGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAA                   <  SRR4302540.9541905/94‑1 (MQ=60)

                                                                            CGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAA                   <  SRR4302540.5344459/94‑1 (MQ=60)

                                                                            CGCTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGACCTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAA                   <  SRR4302540.9541904/94‑1 (MQ=60)

                                                                             GGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAAT                  <  SRR4302540.2582847/94‑1 (MQ=60)

                                                                             GGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAAT                  >  SRR4302540.6514077/1‑94 (MQ=60)

                                                                              GTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATA                 <  SRR4302540.10039184/94‑1 (MQ=60)

                                                                               TACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGG                >  SRR4302540.2780328/1‑94 (MQ=60)

                                                                               TACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGG                >  SRR4302540.4867156/1‑94 (MQ=60)

                                                                                ACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGA               >  SRR4302540.2041685/1‑94 (MQ=60)

                                                                                 CTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGAT              >  SRR4302540.8613983/1‑94 (MQ=60)

                                                                                 CTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGCTGGATAATGTCGCGCGCGAAGCCAGCAACGTTCTCGGGTATTGGAT              >  SRR4302540.316595/1‑94 (MQ=60)

                                                                                   AAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGT            <  SRR4302540.6226210/94‑1 (MQ=60)

                                                                                    AAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCACAATTCTCGGGGAATGGATGTC           >  SRR4302540.7264040/1‑94 (MQ=60)

                                                                                    AAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTC           >  SRR4302540.9919618/1‑94 (MQ=60)

                                                                                    AAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTC           >  SRR4302540.985935/1‑94 (MQ=60)

                                                                                    AAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTC           <  SRR4302540.6366465/94‑1 (MQ=60)

                                                                                     AGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCT          <  SRR4302540.6420519/94‑1 (MQ=60)

                                                                                     AGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCT          >  SRR4302540.8299609/1‑94 (MQ=60)

                                                                                      GAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTT         <  SRR4302540.7421606/94‑1 (MQ=60)

                                                                                      GAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTT         >  SRR4302540.4019977/1‑94 (MQ=60)

                                                                                       AAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGAATGTCTTG        >  SRR4302540.4411254/1‑94 (MQ=60)

                                                                                        AGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGT       >  SRR4302540.3750857/1‑94 (MQ=60)

                                                                                        AGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGT       >  SRR4302540.7816504/1‑94 (MQ=60)

                                                                                        AGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGT       >  SRR4302540.8090220/1‑94 (MQ=60)

                                                                                         GAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCCGCAAAATTCTCGGGTAATGGAGGTCTTGTC      >  SRR4302540.8414421/1‑94 (MQ=60)

                                                                                         GAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTC      >  SRR4302540.8414420/1‑94 (MQ=60)

                                                                                         GAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTC      >  SRR4302540.1369433/1‑94 (MQ=60)

                                                                                          AAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCG     >  SRR4302540.305331/1‑94 (MQ=60)

                                                                                           AGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGA    >  SRR4302540.2715164/1‑94 (MQ=60)

                                                                                           AGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGA    >  SRR4302540.8611712/1‑94 (MQ=60)

                                                                                            GGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAG   <  SRR4302540.5199105/94‑1 (MQ=60)

                                                                                            GGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAG   <  SRR4302540.2030584/94‑1 (MQ=60)

                                                                                            GGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAG   <  SRR4302540.9918590/94‑1 (MQ=60)

                                                                                             GTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAGT  <  SRR4302540.6793404/94‑1 (MQ=60)

                                                                                             GTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAGT  <  SRR4302540.7065740/94‑1 (MQ=60)

TGCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAGT  >  NC_000913/2915666‑2915852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`