Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,915,759 |
A→G |
D894G (GAT→GGT) |
barA → |
sensor‑regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,915,759 | 0 | A | G | 100.0%
| 721.2
/ NA
| 222 | D894G (GAT→GGT) | barA | sensor‑regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (110/112); total (110/112) |
Only 100 of 247 total aligned reads displayed.
ATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTC > NC_000913/2915669‑2915848
|
aTGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGtt < 2:3462223/93‑1 (MQ=255)
aTGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGtt < 2:172648/93‑1 (MQ=255)
aTGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGtt < 1:4116203/93‑1 (MQ=255)
tGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGttt < 2:3016549/93‑1 (MQ=255)
tGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGttt < 2:4535436/93‑1 (MQ=255)
ggCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTg > 2:857220/1‑93 (MQ=255)
ggCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTg < 2:1777065/93‑1 (MQ=255)
ggCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTg < 1:3028557/93‑1 (MQ=255)
gCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTgg < 2:1435901/93‑1 (MQ=255)
gCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTgg < 2:1987342/93‑1 (MQ=255)
aGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGaa < 2:3262728/93‑1 (MQ=255)
aGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGaa < 2:3331057/93‑1 (MQ=255)
gTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAc > 1:5960592/1‑93 (MQ=255)
gTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAc < 1:3530495/93‑1 (MQ=255)
ttGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAcc > 2:3991465/1‑93 (MQ=255)
gCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCgg < 2:2845127/93‑1 (MQ=255)
cGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGa < 2:325190/93‑1 (MQ=255)
ggCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAg > 2:2190867/1‑93 (MQ=255)
gCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgc < 2:2438819/93‑1 (MQ=255)
gCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgc < 2:5193384/93‑1 (MQ=255)
gCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgc > 2:2619154/1‑93 (MQ=255)
gCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgc < 2:4796373/93‑1 (MQ=255)
cTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACAGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgct < 2:3892669/93‑1 (MQ=255)
tataGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgctg > 2:4041104/1‑93 (MQ=255)
tataGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgctg > 2:1147575/1‑93 (MQ=255)
ataGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAgctgc < 1:4911963/93‑1 (MQ=255)
gCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTgg < 1:3387319/93‑1 (MQ=255)
ggTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGaa > 2:4185581/1‑93 (MQ=255)
gtgtGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAc < 1:3641313/93‑1 (MQ=255)
gtgtGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAc < 1:1129857/93‑1 (MQ=255)
gtgtGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAc > 1:4757045/1‑93 (MQ=255)
tgtgCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACt < 2:3115769/93‑1 (MQ=255)
tgCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGt < 1:2660220/93‑1 (MQ=255)
tgCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGt > 2:5631914/1‑93 (MQ=255)
gCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGtt < 1:6102610/93‑1 (MQ=255)
gCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGtt > 1:149385/1‑93 (MQ=255)
ccACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTg > 1:5263051/1‑93 (MQ=255)
cGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGAc < 2:4552953/93‑1 (MQ=255)
tATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACga < 2:3401903/93‑1 (MQ=255)
tATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACga < 1:4341466/93‑1 (MQ=255)
tGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACgaga > 2:5573721/1‑93 (MQ=255)
gaagaaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGAt > 2:4708931/1‑93 (MQ=255)
agaaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAATAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATgg < 1:3993901/93‑1 (MQ=255)
agaaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATgg > 1:4451210/1‑93 (MQ=255)
agaaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATgg > 1:2426239/1‑93 (MQ=255)
aaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGAt > 2:4923499/1‑93 (MQ=255)
aaTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGAt < 2:1048250/93‑1 (MQ=255)
aTCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATa > 2:3763110/1‑93 (MQ=255)
tctcTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATaa < 1:5542478/93‑1 (MQ=255)
tctGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATg > 1:3086679/1‑93 (MQ=255)
tctGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATg > 2:2415916/1‑93 (MQ=255)
ctGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGt < 2:3829245/93‑1 (MQ=255)
tGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGTTAATGTc > 2:4488971/1‑93 (MQ=255)
tGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTc > 1:6138724/1‑93 (MQ=255)
tGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTc < 1:1692465/93‑1 (MQ=255)
gCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcg < 1:3715782/93‑1 (MQ=255)
ccAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgc > 1:5300992/1‑93 (MQ=255)
cAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcg > 1:1190598/1‑93 (MQ=255)
cAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcg > 1:1322857/1‑93 (MQ=255)
cAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcg > 1:5646742/1‑93 (MQ=255)
aaCTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcgc < 2:5749008/93‑1 (MQ=255)
aaCTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcgc > 1:25776/1‑93 (MQ=255)
aCTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcgcg < 1:2950113/93‑1 (MQ=255)
cTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTcgcgcgc < 2:4673051/93‑1 (MQ=255)
gATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGa > 1:1927899/1‑93 (MQ=255)
aTCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGaa > 2:5044860/1‑93 (MQ=255)
tCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAg > 2:911845/1‑93 (MQ=255)
gAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGcc < 1:431649/93‑1 (MQ=255)
gAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGcc < 1:4141895/93‑1 (MQ=255)
aacaacAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCa < 1:5408550/93‑1 (MQ=255)
caacaGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGc > 1:4236097/1‑93 (MQ=255)
aacaGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCa > 1:5065147/1‑93 (MQ=255)
acaGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCaa > 2:5515734/1‑93 (MQ=255)
caGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCaaa > 1:2371561/1‑93 (MQ=255)
aCGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtct > 1:4616997/1‑93 (MQ=255)
aCGTAGCGGTACTAAAGAAGAAGGCTTGGAACCGGAGCTGCTGGGACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtct > 1:2823841/1‑93 (MQ=255)
cGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtctc < 2:1146233/93‑1 (MQ=255)
cGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtctc < 1:3272439/93‑1 (MQ=255)
cGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATtctc < 2:625249/93‑1 (MQ=255)
gTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCg > 2:706894/1‑93 (MQ=255)
aGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCggg < 1:3881480/93‑1 (MQ=255)
ggTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTaa < 2:4124244/93‑1 (MQ=255)
gTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAAt < 1:4259402/93‑1 (MQ=255)
gTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAAt > 2:5976789/1‑93 (MQ=255)
tACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATg > 1:3428746/1‑93 (MQ=255)
cTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGa < 1:2214231/93‑1 (MQ=255)
cTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGa < 2:533527/93‑1 (MQ=255)
cTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGa > 1:203321/1‑93 (MQ=255)
cTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGa < 2:283532/93‑1 (MQ=255)
tAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGAt > 2:4876094/1‑93 (MQ=255)
tAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGAt > 2:3596613/1‑93 (MQ=255)
aaaGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATg > 2:1020179/1‑93 (MQ=255)
aagaagaagGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGt > 1:4470836/1‑93 (MQ=255)
gaagaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCt > 2:2052778/1‑93 (MQ=255)
gaagaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCt < 2:5391910/93‑1 (MQ=255)
aagaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCtt > 1:2498414/1‑93 (MQ=255)
aagaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCtt < 2:4451961/93‑1 (MQ=255)
agaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTg > 2:5868174/1‑93 (MQ=255)
agaaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTg < 1:38483/93‑1 (MQ=255)
aaggTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTc < 1:5797/93‑1 (MQ=255)
|
ATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTC > NC_000913/2915669‑2915848
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAGT > NC_000913/2915666‑2915852
|
TGCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGG < SRR4302533.590220/94‑1 (MQ=60)
ATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTT < SRR4302533.4141210/94‑1 (MQ=60)
TGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTG < SRR4302533.1164908/94‑1 (MQ=60)
TGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTG < SRR4302533.3067239/94‑1 (MQ=60)
TGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTG > SRR4302533.3266718/1‑94 (MQ=60)
GGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGG < SRR4302533.3047090/94‑1 (MQ=60)
CAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAA < SRR4302533.1837120/94‑1 (MQ=60)
AGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAC > SRR4302533.5996652/1‑94 (MQ=60)
AGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAC > SRR4302533.4309825/1‑94 (MQ=60)
AGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAAC > SRR4302533.5996653/1‑94 (MQ=60)
GTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACC < SRR4302533.4199875/94‑1 (MQ=60)
GTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACC < SRR4302533.3552255/94‑1 (MQ=60)
GCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGA > SRR4302533.1427368/1‑94 (MQ=60)
CGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAG < SRR4302533.3566358/94‑1 (MQ=60)
CGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAG > SRR4302533.5979932/1‑94 (MQ=60)
CGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAG < SRR4302533.4157524/94‑1 (MQ=60)
TATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGC > SRR4302533.3012447/1‑94 (MQ=60)
ATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCT > SRR4302533.536700/1‑94 (MQ=60)
ATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCT < SRR4302533.4941717/94‑1 (MQ=60)
TAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTG < SRR4302533.5033057/94‑1 (MQ=60)
AGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGG < SRR4302533.671204/94‑1 (MQ=60)
AGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGG < SRR4302533.4370846/94‑1 (MQ=60)
GCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGA < SRR4302533.3408236/94‑1 (MQ=60)
GGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAC < SRR4302533.5778232/94‑1 (MQ=60)
GGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAC > SRR4302533.4047011/1‑94 (MQ=60)
GGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAAC > SRR4302533.4785909/1‑94 (MQ=60)
GTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACT < SRR4302533.2471482/94‑1 (MQ=60)
GTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACT < SRR4302533.257138/94‑1 (MQ=60)
GTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACT < SRR4302533.1136572/94‑1 (MQ=60)
GTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACT < SRR4302533.3663706/94‑1 (MQ=60)
TGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTT > SRR4302533.5550620/1‑94 (MQ=60)
TGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTT < SRR4302533.2676555/94‑1 (MQ=60)
TGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTT > SRR4302533.150340/1‑94 (MQ=60)
GCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTG < SRR4302533.2199222/94‑1 (MQ=60)
GCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTG < SRR4302533.6139451/94‑1 (MQ=60)
GCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTG > SRR4302533.5294642/1‑94 (MQ=60)
GCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTG < SRR4302533.6048525/94‑1 (MQ=60)
CCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGG < SRR4302533.3041535/94‑1 (MQ=60)
CCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGG > SRR4302533.1447364/1‑94 (MQ=60)
CCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGG < SRR4302533.4582382/94‑1 (MQ=60)
CCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGG > SRR4302533.4215091/1‑94 (MQ=60)
CCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGA > SRR4302533.2787311/1‑94 (MQ=60)
CACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGA < SRR4302533.271300/94‑1 (MQ=60)
CACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGGAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGA > SRR4302533.234083/1‑94 (MQ=60)
ACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGAC < SRR4302533.4823899/94‑1 (MQ=60)
GTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGA > SRR4302533.4667798/1‑94 (MQ=60)
GTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGA > SRR4302533.4333340/1‑94 (MQ=60)
TATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAG < SRR4302533.4367630/94‑1 (MQ=60)
TGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGAT > SRR4302533.4121386/1‑94 (MQ=60)
GAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATG < SRR4302533.5071771/94‑1 (MQ=60)
AAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGG > SRR4302533.2441243/1‑94 (MQ=60)
AAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGG > SRR4302533.4478123/1‑94 (MQ=60)
AGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAATAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGA < SRR4302533.4018221/94‑1 (MQ=60)
TCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAAT > SRR4302533.3469989/1‑94 (MQ=60)
TCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAAT < SRR4302533.5575952/94‑1 (MQ=60)
TCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAAT > SRR4302533.2961207/1‑94 (MQ=60)
CTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATG < SRR4302533.4357845/94‑1 (MQ=60)
CTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATG > SRR4302533.3105654/1‑94 (MQ=60)
CTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATG < SRR4302533.4005825/94‑1 (MQ=60)
CTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGTGATGGCTAATGTA > SRR4302533.3434235/1‑94 (MQ=60)
CTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTC > SRR4302533.6175702/1‑94 (MQ=60)
TGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCG < SRR4302533.1702718/94‑1 (MQ=60)
GCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGC < SRR4302533.3738593/94‑1 (MQ=60)
GCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGC > SRR4302533.5332750/1‑94 (MQ=60)
CCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCG > SRR4302533.5680878/1‑94 (MQ=60)
CCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCG > SRR4302533.1197753/1‑94 (MQ=60)
CCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCG > SRR4302533.1330794/1‑94 (MQ=60)
CCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTCGGACGAGATGGATAATGTCGCG < SRR4302533.6291121/94‑1 (MQ=60)
CAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGC > SRR4302533.5289524/1‑94 (MQ=60)
CAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGC > SRR4302533.5329203/1‑94 (MQ=60)
CAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGC > SRR4302533.25948/1‑94 (MQ=60)
AACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCG < SRR4302533.557075/94‑1 (MQ=60)
ACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGC < SRR4302533.2968154/94‑1 (MQ=60)
ACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGC > SRR4302533.240422/1‑94 (MQ=60)
CTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCG > SRR4302533.5299641/1‑94 (MQ=60)
TGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGA > SRR4302533.1939660/1‑94 (MQ=60)
TCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAGCCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGC > SRR4302533.3397466/1‑94 (MQ=60)
TCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGC > SRR4302533.2051635/1‑94 (MQ=60)
GAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCA < SRR4302533.434222/94‑1 (MQ=60)
GAACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCA < SRR4302533.4167011/94‑1 (MQ=60)
AACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAG < SRR4302533.5441060/94‑1 (MQ=60)
AACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAG > SRR4302533.3699381/1‑94 (MQ=60)
AACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAG < SRR4302533.5592564/94‑1 (MQ=60)
ACAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGC > SRR4302533.4261686/1‑94 (MQ=60)
CAACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCA > SRR4302533.5095741/1‑94 (MQ=60)
AACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAA < SRR4302533.4277579/94‑1 (MQ=60)
ACAGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAA > SRR4302533.2386234/1‑94 (MQ=60)
AGCTACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAAT > SRR4302533.1291194/1‑94 (MQ=60)
AGCTACATAGCGGTGCTAAAGAAGAAGTTGTGGATCCGTAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAAT < SRR4302533.3427486/94‑1 (MQ=60)
TACGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCT > SRR4302533.4644953/1‑94 (MQ=60)
TACGTAGCGGTACTAAAGAAGAAGGCTTGGAACCGGAGCTGCTGGGACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCT > SRR4302533.2841219/1‑94 (MQ=60)
CGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCG > SRR4302533.1809127/1‑94 (MQ=60)
CGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCG < SRR4302533.3292634/94‑1 (MQ=60)
CGTAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCG < SRR4302533.3876615/94‑1 (MQ=60)
TAGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGG > SRR4302533.3690307/1‑94 (MQ=60)
AGCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGT < SRR4302533.3905165/94‑1 (MQ=60)
GCGGTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTA < SRR4302533.3814835/94‑1 (MQ=60)
GTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATG > SRR4302533.3449929/1‑94 (MQ=60)
GTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATG > SRR4302533.1962662/1‑94 (MQ=60)
GTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATG < SRR4302533.3489823/94‑1 (MQ=60)
GTACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATG < SRR4302533.4285072/94‑1 (MQ=60)
ACTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGA > SRR4302533.204613/1‑94 (MQ=60)
CTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGAT < SRR4302533.4380162/94‑1 (MQ=60)
CTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGAT < SRR4302533.2227896/94‑1 (MQ=60)
CTAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGAT < SRR4302533.3295826/94‑1 (MQ=60)
TAAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATG < SRR4302533.2558153/94‑1 (MQ=60)
AAAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGT > SRR4302533.4497873/1‑94 (MQ=60)
AAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTC > SRR4302533.5782822/1‑94 (MQ=60)
AAGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTC > SRR4302533.2646751/1‑94 (MQ=60)
AGAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCT > SRR4302533.239327/1‑94 (MQ=60)
GAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTT > SRR4302533.449677/1‑94 (MQ=60)
GAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTT > SRR4302533.4762579/1‑94 (MQ=60)
GAAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTT > SRR4302533.2513827/1‑94 (MQ=60)
AAGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTG > SRR4302533.1658900/1‑94 (MQ=60)
AGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGT < SRR4302533.38736/94‑1 (MQ=60)
AGAAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGT < SRR4302533.388871/94‑1 (MQ=60)
AAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCG < SRR4302533.5852/94‑1 (MQ=60)
AAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCG < SRR4302533.614431/94‑1 (MQ=60)
AAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGAAATGGATGTCTTGTCA > SRR4302533.5196567/1‑94 (MQ=60)
AAGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAAAGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCG > SRR4302533.970199/1‑94 (MQ=60)
AGGTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGA > SRR4302533.5237016/1‑94 (MQ=60)
GTTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAGT > SRR4302533.1370717/1‑94 (MQ=60)
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TGCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAGT > NC_000913/2915666‑2915852
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
